TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| C-JID | PF20160 | 9 - 146 | 1.3e-06 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 696 |
| AccB1I | GGYRCC | 1 cut(s) | 413 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 281, 1199 |
| AccI | GTMKAC | 3 cut(s) | 421, 589, 859 |
| AciI | CCGC | 3 cut(s) | 311, 773, 841 |
| AclI | AACGTT | 1 cut(s) | 242 |
| AclWI | GGATC | 1 cut(s) | 590 |
| AcsI | RAATTY | 3 cut(s) | 182, 505, 884 |
| AcuI | CTGAAG | 1 cut(s) | 656 |
| AcvI | CACGTG | 1 cut(s) | 1019 |
| AdeI | CACNNNGTG | 1 cut(s) | 722 |
| AfaI | GTAC | 4 cut(s) | 214, 916, 1081, 1231 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 119, 281, 1199, 1367 |
| AhlI | ACTAGT | 1 cut(s) | 167 |
| AjnI | CCWGG | 4 cut(s) | 570, 598, 1086, 1335 |
| AleI | CACNNNNGTG | 1 cut(s) | 1107 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 370, 402 |
| AluBI | AGCT | 5 cut(s) | 23, 63, 392, 1199, 1210 |
| AluI | AGCT | 5 cut(s) | 23, 63, 392, 1199, 1210 |
| Alw21I | GWGCWC | 3 cut(s) | 356, 1104, 1212 |
| Alw26I | GTCTC | 1 cut(s) | 840 |
| Alw44I | GTGCAC | 2 cut(s) | 352, 1100 |
| AlwI | GGATC | 1 cut(s) | 590 |
| ApaLI | GTGCAC | 2 cut(s) | 352, 1100 |
| ApeKI | GCWGC | 3 cut(s) | 57, 60, 827 |
| ApoI | RAATTY | 3 cut(s) | 182, 505, 884 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 669 |
| AspS9I | GGNCC | 1 cut(s) | 224 |
| AsuHPI | GGTGA | 1 cut(s) | 412 |
| AsuNHI | GCTAGC | 1 cut(s) | 23 |
| AvaII | GGWCC | 1 cut(s) | 224 |
| BaeGI | GKGCMC | 4 cut(s) | 356, 418, 923, 1104 |
| BanI | GGYRCC | 1 cut(s) | 413 |
| BanII | GRGCYC | 1 cut(s) | 1212 |
| BauI | CACGAG | 1 cut(s) | 191 |
| BbrPI | CACGTG | 1 cut(s) | 1019 |
| Bbv12I | GWGCWC | 3 cut(s) | 356, 1104, 1212 |
| BbvI | GCAGC | 3 cut(s) | 69, 72, 814 |
| BceAI | ACGGC | 3 cut(s) | 97, 729, 1001 |
| BciT130I | CCWGG | 4 cut(s) | 572, 600, 1088, 1337 |
| BciVI | GTATCC | 1 cut(s) | 116 |
| BcoDI | GTCTC | 1 cut(s) | 840 |
| BcuI | ACTAGT | 1 cut(s) | 167 |
| BfaI | CTAG | 5 cut(s) | 24, 146, 168, 375, 1316 |
| BfuAI | ACCTGC | 1 cut(s) | 696 |
| BfuI | GTATCC | 1 cut(s) | 116 |
| BisI | GCNGC | 3 cut(s) | 58, 61, 828 |
| BlsI | GCNGC | 3 cut(s) | 59, 62, 829 |
| BmcAI | AGTACT | 1 cut(s) | 1231 |
| Bme1390I | CCNGG | 4 cut(s) | 572, 600, 1088, 1337 |
| Bme18I | GGWCC | 1 cut(s) | 224 |
| BmgT120I | GGNCC | 1 cut(s) | 224 |
| BmiI | GGNNCC | 1 cut(s) | 415 |
| BmrFI | CCNGG | 4 cut(s) | 572, 600, 1088, 1337 |
| BmrI | ACTGGG | 1 cut(s) | 777 |
| BmsI | GCATC | 2 cut(s) | 322, 1040 |
| BmtI | GCTAGC | 1 cut(s) | 27 |
| BmuI | ACTGGG | 1 cut(s) | 777 |
| BpmI | CTGGAG | 1 cut(s) | 621 |
| BsaAI | YACGTR | 2 cut(s) | 914, 1019 |
| BsaI | GGTCTC | 1 cut(s) | 840 |
| BsaJI | CCNNGG | 2 cut(s) | 113, 1336 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 119, 281, 1199, 1367 |
| Bse1I | ACTGG | 2 cut(s) | 286, 783 |
| Bse3DI | GCAATG | 1 cut(s) | 683 |
| BseBI | CCWGG | 4 cut(s) | 572, 600, 1088, 1337 |
| BseDI | CCNNGG | 2 cut(s) | 113, 1336 |
| BseGI | GGATG | 2 cut(s) | 951, 1055 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 119, 281, 1199, 1367 |
| BseMI | GCAATG | 1 cut(s) | 683 |
| BseMII | CTCAG | 4 cut(s) | 656, 774, 1196, 1247 |
| BseNI | ACTGG | 2 cut(s) | 286, 783 |
| BseSI | GKGCMC | 4 cut(s) | 356, 418, 923, 1104 |
| BseXI | GCAGC | 3 cut(s) | 69, 72, 814 |
| BsgI | GTGCAG | 2 cut(s) | 674, 1347 |
| BshNI | GGYRCC | 1 cut(s) | 413 |
| BsiHKAI | GWGCWC | 3 cut(s) | 356, 1104, 1212 |
| BsiWI | CGTACG | 1 cut(s) | 914 |
| BslFI | GGGAC | 2 cut(s) | 257, 293 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 119, 281, 1199, 1367 |
| BsmAI | GTCTC | 1 cut(s) | 840 |
| BsmFI | GGGAC | 2 cut(s) | 257, 293 |
| BsmI | GAATGC | 3 cut(s) | 581, 905, 945 |
| Bso31I | GGTCTC | 1 cut(s) | 840 |
| Bsp1286I | GDGCHC | 5 cut(s) | 356, 418, 923, 1104, 1212 |
| Bsp143I | GATC | 2 cut(s) | 595, 889 |
| BspACI | CCGC | 3 cut(s) | 311, 773, 841 |
| BspCNI | CTCAG | 4 cut(s) | 655, 773, 1195, 1246 |
| BspLI | GGNNCC | 1 cut(s) | 415 |
| BspMI | ACCTGC | 1 cut(s) | 696 |
| BspOI | GCTAGC | 1 cut(s) | 27 |
| BspPI | GGATC | 1 cut(s) | 590 |
| BspQI | GCTCTTC | 1 cut(s) | 70 |
| BspT107I | GGYRCC | 1 cut(s) | 413 |
| BspTNI | GGTCTC | 1 cut(s) | 840 |
| BsrDI | GCAATG | 1 cut(s) | 683 |
| BsrI | ACTGG | 2 cut(s) | 286, 783 |
| BssECI | CCNNGG | 2 cut(s) | 113, 1336 |
| BssMI | GATC | 2 cut(s) | 595, 889 |
| BssNAI | GTATAC | 1 cut(s) | 860 |
| BssSI | CACGAG | 1 cut(s) | 191 |
| Bst1107I | GTATAC | 1 cut(s) | 860 |
| Bst2BI | CACGAG | 1 cut(s) | 191 |
| Bst2UI | CCWGG | 4 cut(s) | 572, 600, 1088, 1337 |
| Bst4CI | ACNGT | 5 cut(s) | 76, 224, 333, 838, 1109 |
| Bst6I | CTCTTC | 3 cut(s) | 70, 234, 978 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 824, 1305 |
| BstBAI | YACGTR | 2 cut(s) | 914, 1019 |
| BstC8I | GCNNGC | 3 cut(s) | 25, 110, 370 |
| BstDEI | CTNAG | 7 cut(s) | 264, 642, 732, 760, 957, 1182, 1233 |
| BstDSI | CCRYGG | 1 cut(s) | 113 |
| BstEII | GGTNACC | 1 cut(s) | 1112 |
| BstF5I | GGATG | 2 cut(s) | 951, 1055 |
| BstKTI | GATC | 2 cut(s) | 598, 892 |
| BstMAI | GTCTC | 1 cut(s) | 840 |
| BstMBI | GATC | 2 cut(s) | 595, 889 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 576, 824, 1305 |
| BstNI | CCWGG | 4 cut(s) | 572, 600, 1088, 1337 |
| BstNSI | RCATGY | 1 cut(s) | 372 |
| BstPI | GGTNACC | 1 cut(s) | 1112 |
| BstSCI | CCNGG | 4 cut(s) | 570, 598, 1086, 1335 |
| BstSLI | GKGCMC | 4 cut(s) | 356, 418, 923, 1104 |
| BstV1I | GCAGC | 3 cut(s) | 69, 72, 814 |
| BstZ17I | GTATAC | 1 cut(s) | 860 |
| BsuI | GTATCC | 1 cut(s) | 116 |
| BtgI | CCRYGG | 1 cut(s) | 113 |
| BtsCI | GGATG | 2 cut(s) | 951, 1055 |
| BtsIMutI | CAGTG | 3 cut(s) | 279, 633, 1290 |
| BveI | ACCTGC | 1 cut(s) | 696 |
| Cac8I | GCNNGC | 3 cut(s) | 25, 110, 370 |
| Cfr13I | GGNCC | 1 cut(s) | 224 |
| Csp6I | GTAC | 4 cut(s) | 213, 915, 1080, 1230 |
| CviQI | GTAC | 4 cut(s) | 213, 915, 1080, 1230 |
| DdeI | CTNAG | 7 cut(s) | 264, 642, 732, 760, 957, 1182, 1233 |
| DpnI | GATC | 2 cut(s) | 597, 891 |
| DpnII | GATC | 2 cut(s) | 595, 889 |
| DraIII | CACNNNGTG | 1 cut(s) | 722 |
| Eam1104I | CTCTTC | 3 cut(s) | 70, 234, 978 |
| EarI | CTCTTC | 3 cut(s) | 70, 234, 978 |
| Ecl136II | GAGCTC | 1 cut(s) | 1210 |
| Eco24I | GRGCYC | 1 cut(s) | 1212 |
| Eco31I | GGTCTC | 1 cut(s) | 840 |
| Eco47I | GGWCC | 1 cut(s) | 224 |
| Eco53kI | GAGCTC | 1 cut(s) | 1210 |
| Eco57I | CTGAAG | 1 cut(s) | 656 |
| Eco72I | CACGTG | 1 cut(s) | 1019 |
| Eco91I | GGTNACC | 1 cut(s) | 1112 |
| EcoICRI | GAGCTC | 1 cut(s) | 1210 |
| EcoO65I | GGTNACC | 1 cut(s) | 1112 |
| EcoRI | GAATTC | 1 cut(s) | 505 |
| EcoRII | CCWGG | 4 cut(s) | 570, 598, 1086, 1335 |
| EcoT22I | ATGCAT | 1 cut(s) | 1055 |
| EcoT38I | GRGCYC | 1 cut(s) | 1212 |
| FaqI | GGGAC | 2 cut(s) | 257, 293 |
| FauI | CCCGC | 2 cut(s) | 318, 780 |
| FblI | GTMKAC | 3 cut(s) | 421, 589, 859 |
| Fnu4HI | GCNGC | 3 cut(s) | 58, 61, 828 |
| FokI | GGATG | 2 cut(s) | 938, 1062 |
| FriOI | GRGCYC | 1 cut(s) | 1212 |
| Fsp4HI | GCNGC | 3 cut(s) | 58, 61, 828 |
| FspBI | CTAG | 5 cut(s) | 24, 146, 168, 375, 1316 |
| GluI | GCNGC | 3 cut(s) | 58, 61, 828 |
| GsuI | CTGGAG | 1 cut(s) | 621 |
| HincII | GTYRAC | 1 cut(s) | 528 |
| HindII | GTYRAC | 1 cut(s) | 528 |
| HinfI | GANTC | 3 cut(s) | 548, 591, 638 |
| HphI | GGTGA | 1 cut(s) | 412 |
| Hpy166II | GTNNAC | 7 cut(s) | 236, 354, 422, 528, 590, 860, 1102 |
| Hpy188I | TCNGA | 6 cut(s) | 645, 662, 685, 964, 1189, 1254 |
| Hpy188III | TCNNGA | 3 cut(s) | 35, 1031, 1042 |
| Hpy8I | GTNNAC | 7 cut(s) | 236, 354, 422, 528, 590, 860, 1102 |
| HpyAV | CCTTC | 3 cut(s) | 493, 680, 1136 |
| HpyCH4III | ACNGT | 5 cut(s) | 76, 224, 333, 838, 1109 |
| HpyCH4IV | ACGT | 5 cut(s) | 242, 270, 721, 913, 1018 |
| HpyCH4V | TGCA | 9 cut(s) | 354, 372, 474, 650, 691, 1053, 1102, 1299, 1364 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 576, 824, 1305 |
| HpyF3I | CTNAG | 7 cut(s) | 264, 642, 732, 760, 957, 1182, 1233 |
| HpySE526I | ACGT | 5 cut(s) | 242, 270, 721, 913, 1018 |
| Kzo9I | GATC | 2 cut(s) | 595, 889 |
| LguI | GCTCTTC | 1 cut(s) | 70 |
| Lsp1109I | GCAGC | 3 cut(s) | 69, 72, 814 |
| LweI | GCATC | 2 cut(s) | 322, 1040 |
| MaeI | CTAG | 5 cut(s) | 24, 146, 168, 375, 1316 |
| MaeII | ACGT | 5 cut(s) | 242, 270, 721, 913, 1018 |
| MaeIII | GTNAC | 1 cut(s) | 1112 |
| MalI | GATC | 2 cut(s) | 597, 891 |
| MboI | GATC | 2 cut(s) | 595, 889 |
| MboII | GAAGA | 4 cut(s) | 57, 221, 557, 965 |
| MhlI | GDGCHC | 5 cut(s) | 356, 418, 923, 1104, 1212 |
| MlyI | GAGTC | 1 cut(s) | 585 |
| MmeI | TCCRAC | 2 cut(s) | 103, 708 |
| MnlI | CCTC | 9 cut(s) | 237, 358, 391, 508, 577, 596, 641, 862, 981 |
| Mph1103I | ATGCAT | 1 cut(s) | 1055 |
| MroXI | GAANNNNTTC | 1 cut(s) | 669 |
| MseI | TTAA | 4 cut(s) | 45, 186, 495, 696 |
| MslI | CAYNNNNRTG | 4 cut(s) | 1058, 1097, 1107, 1134 |
| MspA1I | CMGCKG | 1 cut(s) | 392 |
| MspR9I | CCNGG | 4 cut(s) | 572, 600, 1088, 1337 |
| Mva1269I | GAATGC | 3 cut(s) | 581, 905, 945 |
| MvaI | CCWGG | 4 cut(s) | 572, 600, 1088, 1337 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 576, 824, 1305 |
| NdeII | GATC | 2 cut(s) | 595, 889 |
| NheI | GCTAGC | 1 cut(s) | 23 |
| NlaIV | GGNNCC | 1 cut(s) | 415 |
| NsiI | ATGCAT | 1 cut(s) | 1055 |
| NspI | RCATGY | 1 cut(s) | 372 |
| OliI | CACNNNNGTG | 1 cut(s) | 1107 |
| PaeI | GCATGC | 1 cut(s) | 372 |
| PciSI | GCTCTTC | 1 cut(s) | 70 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 267 |
| PctI | GAATGC | 3 cut(s) | 581, 905, 945 |
| PdmI | GAANNNNTTC | 1 cut(s) | 669 |
| PfeI | GAWTC | 2 cut(s) | 548, 638 |
| Pfl23II | CGTACG | 1 cut(s) | 914 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 281, 1199 |
| PfoI | TCCNGGA | 1 cut(s) | 598 |
| PkrI | GCNGC | 3 cut(s) | 59, 62, 829 |
| PleI | GAGTC | 1 cut(s) | 585 |
| PmaCI | CACGTG | 1 cut(s) | 1019 |
| PmlI | CACGTG | 1 cut(s) | 1019 |
| PpsI | GAGTC | 1 cut(s) | 585 |
| Ppu21I | YACGTR | 2 cut(s) | 914, 1019 |
| Psp124BI | GAGCTC | 1 cut(s) | 1212 |
| Psp1406I | AACGTT | 1 cut(s) | 242 |
| Psp6I | CCWGG | 4 cut(s) | 570, 598, 1086, 1335 |
| PspCI | CACGTG | 1 cut(s) | 1019 |
| PspEI | GGTNACC | 1 cut(s) | 1112 |
| PspGI | CCWGG | 4 cut(s) | 570, 598, 1086, 1335 |
| PspLI | CGTACG | 1 cut(s) | 914 |
| PspN4I | GGNNCC | 1 cut(s) | 415 |
| PspPI | GGNCC | 1 cut(s) | 224 |
| PvuII | CAGCTG | 1 cut(s) | 392 |
| RsaI | GTAC | 4 cut(s) | 214, 916, 1081, 1231 |
| RsaNI | GTAC | 4 cut(s) | 213, 915, 1080, 1230 |
| RseI | CAYNNNNRTG | 4 cut(s) | 1058, 1097, 1107, 1134 |
| SacI | GAGCTC | 1 cut(s) | 1212 |
| SapI | GCTCTTC | 1 cut(s) | 70 |
| SaqAI | TTAA | 4 cut(s) | 45, 186, 495, 696 |
| SatI | GCNGC | 3 cut(s) | 58, 61, 828 |
| Sau3AI | GATC | 2 cut(s) | 595, 889 |
| Sau96I | GGNCC | 1 cut(s) | 224 |
| ScaI | AGTACT | 1 cut(s) | 1231 |
| SchI | GAGTC | 1 cut(s) | 585 |
| ScrFI | CCNGG | 4 cut(s) | 572, 600, 1088, 1337 |
| SduI | GDGCHC | 5 cut(s) | 356, 418, 923, 1104, 1212 |
| SfaNI | GCATC | 2 cut(s) | 322, 1040 |
| SinI | GGWCC | 1 cut(s) | 224 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 1058, 1097, 1107, 1134 |
| SpeI | ACTAGT | 1 cut(s) | 167 |
| SphI | GCATGC | 1 cut(s) | 372 |
| SsiI | CCGC | 3 cut(s) | 311, 773, 841 |
| SspI | AATATT | 2 cut(s) | 49, 1304 |
| SspMI | CTAG | 5 cut(s) | 24, 146, 168, 375, 1316 |
| SstI | GAGCTC | 1 cut(s) | 1212 |
| StyD4I | CCNGG | 4 cut(s) | 570, 598, 1086, 1335 |
| TaaI | ACNGT | 5 cut(s) | 76, 224, 333, 838, 1109 |
| TaiI | ACGT | 5 cut(s) | 245, 273, 724, 916, 1021 |
| TaqI | TCGA | 1 cut(s) | 594 |
| TatI | WGTACW | 2 cut(s) | 1079, 1229 |
| TfiI | GAWTC | 2 cut(s) | 548, 638 |
| Tru1I | TTAA | 4 cut(s) | 45, 186, 495, 696 |
| Tru9I | TTAA | 4 cut(s) | 45, 186, 495, 696 |
| TscAI | CASTG | 3 cut(s) | 286, 640, 1290 |
| TseI | GCWGC | 3 cut(s) | 57, 60, 827 |
| TspDTI | ATGAA | 9 cut(s) | 6, 168, 267, 459, 812, 985, 1064, 1076, 1178 |
| TspGWI | ACGGA | 1 cut(s) | 541 |
| TspRI | CASTG | 3 cut(s) | 286, 640, 1290 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 281, 1199 |
| VneI | GTGCAC | 2 cut(s) | 352, 1100 |
| VpaK11BI | GGWCC | 1 cut(s) | 224 |
| XapI | RAATTY | 3 cut(s) | 182, 505, 884 |
| XceI | RCATGY | 1 cut(s) | 372 |
| XmiI | GTMKAC | 3 cut(s) | 421, 589, 859 |
| XmnI | GAANNNNTTC | 1 cut(s) | 669 |
| XspI | CTAG | 5 cut(s) | 24, 146, 168, 375, 1316 |
| ZrmI | AGTACT | 1 cut(s) | 1231 |
| Zsp2I | ATGCAT | 1 cut(s) | 1055 |