TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| LEA_2 | PF03168 | 44 - 140 | 1.2e-21 | Late embryogenesis abundant protein |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 274 |
| AccB1I | GGYRCC | 2 cut(s) | 274, 286 |
| AccIII | TCCGGA | 1 cut(s) | 229 |
| AclWI | GGATC | 1 cut(s) | 247 |
| AcoI | YGGCCR | 1 cut(s) | 48 |
| AcuI | CTGAAG | 1 cut(s) | 76 |
| AdeI | CACNNNGTG | 1 cut(s) | 296 |
| AfaI | GTAC | 2 cut(s) | 122, 276 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 236, 271, 386 |
| AflII | CTTAAG | 1 cut(s) | 245 |
| AluBI | AGCT | 2 cut(s) | 105, 430 |
| AluI | AGCT | 2 cut(s) | 105, 430 |
| Alw26I | GTCTC | 1 cut(s) | 368 |
| AlwI | GGATC | 1 cut(s) | 247 |
| Aor13HI | TCCGGA | 1 cut(s) | 229 |
| AoxI | GGCC | 2 cut(s) | 21, 48 |
| Asp718I | GGTACC | 1 cut(s) | 274 |
| AspS9I | GGNCC | 2 cut(s) | 133, 232 |
| AsuC2I | CCSGG | 1 cut(s) | 237 |
| AsuHPI | GGTGA | 4 cut(s) | 325, 358, 388, 433 |
| AvaII | GGWCC | 2 cut(s) | 133, 232 |
| BalI | TGGCCA | 1 cut(s) | 50 |
| BanI | GGYRCC | 2 cut(s) | 274, 286 |
| BccI | CCATC | 2 cut(s) | 170, 176 |
| BclI | TGATCA | 1 cut(s) | 154 |
| BcnI | CCSGG | 1 cut(s) | 237 |
| BcoDI | GTCTC | 1 cut(s) | 368 |
| BfrI | CTTAAG | 1 cut(s) | 245 |
| BglII | AGATCT | 2 cut(s) | 73, 177 |
| Bme1390I | CCNGG | 1 cut(s) | 237 |
| Bme18I | GGWCC | 2 cut(s) | 133, 232 |
| BmgT120I | GGNCC | 2 cut(s) | 133, 232 |
| BmiI | GGNNCC | 3 cut(s) | 234, 276, 288 |
| BmrFI | CCNGG | 1 cut(s) | 237 |
| BpmI | CTGGAG | 1 cut(s) | 290 |
| BpuMI | CCSGG | 1 cut(s) | 237 |
| BsaI | GGTCTC | 1 cut(s) | 368 |
| BsaJI | CCNNGG | 2 cut(s) | 114, 235 |
| BsaWI | WCCGGW | 1 cut(s) | 229 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 236, 271, 386 |
| Bse1I | ACTGG | 1 cut(s) | 278 |
| BseAI | TCCGGA | 1 cut(s) | 229 |
| BseDI | CCNNGG | 2 cut(s) | 114, 235 |
| BseGI | GGATG | 2 cut(s) | 162, 325 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 236, 271, 386 |
| BseMII | CTCAG | 1 cut(s) | 20 |
| BseNI | ACTGG | 1 cut(s) | 278 |
| BseYI | CCCAGC | 1 cut(s) | 434 |
| BshFI | GGCC | 2 cut(s) | 23, 50 |
| BshNI | GGYRCC | 2 cut(s) | 274, 286 |
| BsiSI | CCGG | 3 cut(s) | 65, 230, 237 |
| BslFI | GGGAC | 2 cut(s) | 235, 350 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 236, 271, 386 |
| BsmAI | GTCTC | 1 cut(s) | 368 |
| BsmFI | GGGAC | 2 cut(s) | 235, 350 |
| BsnI | GGCC | 2 cut(s) | 23, 50 |
| Bso31I | GGTCTC | 1 cut(s) | 368 |
| Bsp13I | TCCGGA | 1 cut(s) | 229 |
| Bsp143I | GATC | 5 cut(s) | 73, 154, 177, 239, 423 |
| BspANI | GGCC | 2 cut(s) | 23, 50 |
| BspCNI | CTCAG | 1 cut(s) | 19 |
| BspEI | TCCGGA | 1 cut(s) | 229 |
| BspLI | GGNNCC | 3 cut(s) | 234, 276, 288 |
| BspPI | GGATC | 1 cut(s) | 247 |
| BspT107I | GGYRCC | 2 cut(s) | 274, 286 |
| BspTI | CTTAAG | 1 cut(s) | 245 |
| BspTNI | GGTCTC | 1 cut(s) | 368 |
| BsrI | ACTGG | 1 cut(s) | 278 |
| BssECI | CCNNGG | 2 cut(s) | 114, 235 |
| BssMI | GATC | 5 cut(s) | 73, 154, 177, 239, 423 |
| Bst4CI | ACNGT | 1 cut(s) | 226 |
| BstAFI | CTTAAG | 1 cut(s) | 245 |
| BstC8I | GCNNGC | 1 cut(s) | 103 |
| BstDEI | CTNAG | 1 cut(s) | 6 |
| BstDSI | CCRYGG | 1 cut(s) | 114 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 269 |
| BstF5I | GGATG | 2 cut(s) | 162, 325 |
| BstKTI | GATC | 5 cut(s) | 76, 157, 180, 242, 426 |
| BstMAI | GTCTC | 1 cut(s) | 368 |
| BstMBI | GATC | 5 cut(s) | 73, 154, 177, 239, 423 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 444 |
| BstSCI | CCNGG | 1 cut(s) | 235 |
| BstX2I | RGATCY | 2 cut(s) | 73, 177 |
| BstYI | RGATCY | 2 cut(s) | 73, 177 |
| BsuRI | GGCC | 2 cut(s) | 23, 50 |
| BtgI | CCRYGG | 1 cut(s) | 114 |
| BtsCI | GGATG | 2 cut(s) | 162, 325 |
| Cac8I | GCNNGC | 1 cut(s) | 103 |
| Cfr13I | GGNCC | 2 cut(s) | 133, 232 |
| Csp6I | GTAC | 2 cut(s) | 121, 275 |
| CviAII | CATG | 1 cut(s) | 137 |
| CviJI | RGCY | 8 cut(s) | 5, 23, 50, 64, 105, 430, 438, 447 |
| CviKI_1 | RGCY | 8 cut(s) | 5, 23, 50, 64, 105, 430, 438, 447 |
| CviQI | GTAC | 2 cut(s) | 121, 275 |
| DdeI | CTNAG | 1 cut(s) | 6 |
| DpnI | GATC | 5 cut(s) | 75, 156, 179, 241, 425 |
| DpnII | GATC | 5 cut(s) | 73, 154, 177, 239, 423 |
| DraIII | CACNNNGTG | 1 cut(s) | 296 |
| EaeI | YGGCCR | 1 cut(s) | 48 |
| Eco31I | GGTCTC | 1 cut(s) | 368 |
| Eco47I | GGWCC | 2 cut(s) | 133, 232 |
| Eco57I | CTGAAG | 1 cut(s) | 76 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 269 |
| FaeI | CATG | 1 cut(s) | 140 |
| FaiI | YATR | 6 cut(s) | 138, 153, 215, 294, 348, 401 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 89, 121 |
| FaqI | GGGAC | 2 cut(s) | 235, 350 |
| FatI | CATG | 1 cut(s) | 136 |
| FbaI | TGATCA | 1 cut(s) | 154 |
| FokI | GGATG | 2 cut(s) | 149, 332 |
| GsaI | CCCAGC | 1 cut(s) | 438 |
| GsuI | CTGGAG | 1 cut(s) | 290 |
| HaeIII | GGCC | 2 cut(s) | 23, 50 |
| HapII | CCGG | 3 cut(s) | 65, 230, 237 |
| Hin1II | CATG | 1 cut(s) | 140 |
| HincII | GTYRAC | 1 cut(s) | 88 |
| HindII | GTYRAC | 1 cut(s) | 88 |
| HindIII | AAGCTT | 1 cut(s) | 428 |
| HinfI | GANTC | 1 cut(s) | 110 |
| HpaII | CCGG | 3 cut(s) | 65, 230, 237 |
| HphI | GGTGA | 4 cut(s) | 325, 358, 388, 433 |
| Hpy166II | GTNNAC | 1 cut(s) | 88 |
| Hpy188III | TCNNGA | 4 cut(s) | 34, 94, 230, 269 |
| Hpy8I | GTNNAC | 1 cut(s) | 88 |
| HpyAV | CCTTC | 5 cut(s) | 91, 275, 310, 386, 409 |
| HpyCH4III | ACNGT | 1 cut(s) | 226 |
| HpyCH4IV | ACGT | 1 cut(s) | 54 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 444 |
| HpyF3I | CTNAG | 1 cut(s) | 6 |
| HpySE526I | ACGT | 1 cut(s) | 54 |
| Hsp92II | CATG | 1 cut(s) | 140 |
| Kpn2I | TCCGGA | 1 cut(s) | 229 |
| KpnI | GGTACC | 1 cut(s) | 278 |
| Ksp22I | TGATCA | 1 cut(s) | 154 |
| Kzo9I | GATC | 5 cut(s) | 73, 154, 177, 239, 423 |
| MaeII | ACGT | 1 cut(s) | 54 |
| MaeIII | GTNAC | 2 cut(s) | 34, 259 |
| MalI | GATC | 5 cut(s) | 75, 156, 179, 241, 425 |
| MboI | GATC | 5 cut(s) | 73, 154, 177, 239, 423 |
| MflI | RGATCY | 2 cut(s) | 73, 177 |
| MlsI | TGGCCA | 1 cut(s) | 50 |
| MluNI | TGGCCA | 1 cut(s) | 50 |
| MnlI | CCTC | 5 cut(s) | 61, 200, 265, 449, 458 |
| Mox20I | TGGCCA | 1 cut(s) | 50 |
| MroI | TCCGGA | 1 cut(s) | 229 |
| MscI | TGGCCA | 1 cut(s) | 50 |
| MseI | TTAA | 2 cut(s) | 246, 282 |
| Msp20I | TGGCCA | 1 cut(s) | 50 |
| MspCI | CTTAAG | 1 cut(s) | 245 |
| MspI | CCGG | 3 cut(s) | 65, 230, 237 |
| MspR9I | CCNGG | 1 cut(s) | 237 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 444 |
| NciI | CCSGG | 1 cut(s) | 237 |
| NdeII | GATC | 5 cut(s) | 73, 154, 177, 239, 423 |
| NlaIII | CATG | 1 cut(s) | 140 |
| NlaIV | GGNNCC | 3 cut(s) | 234, 276, 288 |
| NmuCI | GTSAC | 1 cut(s) | 34 |
| PfeI | GAWTC | 1 cut(s) | 110 |
| PspFI | CCCAGC | 1 cut(s) | 434 |
| PspN4I | GGNNCC | 3 cut(s) | 234, 276, 288 |
| PspPI | GGNCC | 2 cut(s) | 133, 232 |
| PsuI | RGATCY | 2 cut(s) | 73, 177 |
| RsaI | GTAC | 2 cut(s) | 122, 276 |
| RsaNI | GTAC | 2 cut(s) | 121, 275 |
| SaqAI | TTAA | 2 cut(s) | 246, 282 |
| Sau3AI | GATC | 5 cut(s) | 73, 154, 177, 239, 423 |
| Sau96I | GGNCC | 2 cut(s) | 133, 232 |
| ScrFI | CCNGG | 1 cut(s) | 237 |
| SetI | ASST | 8 cut(s) | 57, 107, 135, 276, 288, 378, 406, 432 |
| SinI | GGWCC | 2 cut(s) | 133, 232 |
| SmlI | CTYRAG | 1 cut(s) | 245 |
| SmoI | CTYRAG | 1 cut(s) | 245 |
| StyD4I | CCNGG | 1 cut(s) | 235 |
| TaaI | ACNGT | 1 cut(s) | 226 |
| TaiI | ACGT | 1 cut(s) | 57 |
| TaqI | TCGA | 1 cut(s) | 108 |
| TatI | WGTACW | 1 cut(s) | 120 |
| TfiI | GAWTC | 1 cut(s) | 110 |
| Tru1I | TTAA | 2 cut(s) | 246, 282 |
| Tru9I | TTAA | 2 cut(s) | 246, 282 |
| TseFI | GTSAC | 1 cut(s) | 34 |
| Tsp45I | GTSAC | 1 cut(s) | 34 |
| TspGWI | ACGGA | 1 cut(s) | 103 |
| Vha464I | CTTAAG | 1 cut(s) | 245 |
| VpaK11BI | GGWCC | 2 cut(s) | 133, 232 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 269 |