TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| LRR_14 | PF23598 | 20 - 106 | 6.6e-11 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 49 - 232 | 1e-07 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 136 - 214 | 2.1e-07 | Leucine-rich repeat region |
| C-JID | PF20160 | 293 - 437 | 5.2e-18 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 585 |
| Acc36I | ACCTGC | 1 cut(s) | 204 |
| AccI | GTMKAC | 1 cut(s) | 651 |
| AciI | CCGC | 3 cut(s) | 765, 1016, 1262 |
| AclI | AACGTT | 1 cut(s) | 811 |
| AclWI | GGATC | 3 cut(s) | 456, 1107, 1122 |
| AcoI | YGGCCR | 2 cut(s) | 565, 684 |
| AcuI | CTGAAG | 1 cut(s) | 575 |
| AfaI | GTAC | 3 cut(s) | 714, 902, 1217 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 1219, 1352, 1353 |
| AflII | CTTAAG | 1 cut(s) | 800 |
| AjnI | CCWGG | 2 cut(s) | 877, 946 |
| AleI | CACNNNNGTG | 2 cut(s) | 912, 1165 |
| AlwI | GGATC | 3 cut(s) | 456, 1107, 1122 |
| Ama87I | CYCGRG | 1 cut(s) | 11 |
| AoxI | GGCC | 5 cut(s) | 565, 684, 920, 1053, 1444 |
| ApeKI | GCWGC | 3 cut(s) | 762, 940, 1379 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 370, 402 |
| AseI | ATTAAT | 1 cut(s) | 1038 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 306, 588 |
| AspLEI | GCGC | 1 cut(s) | 1442 |
| AspS9I | GGNCC | 3 cut(s) | 920, 1282, 1445 |
| AsuHPI | GGTGA | 4 cut(s) | 324, 899, 970, 1201 |
| AsuNHI | GCTAGC | 1 cut(s) | 656 |
| AvaI | CYCGRG | 1 cut(s) | 11 |
| AvaII | GGWCC | 1 cut(s) | 1282 |
| BaeGI | GKGCMC | 1 cut(s) | 270 |
| BalI | TGGCCA | 1 cut(s) | 686 |
| BbsI | GAAGAC | 2 cut(s) | 116, 581 |
| BbvI | GCAGC | 3 cut(s) | 749, 927, 1391 |
| BccI | CCATC | 3 cut(s) | 643, 964, 1430 |
| BceAI | ACGGC | 1 cut(s) | 397 |
| BciT130I | CCWGG | 2 cut(s) | 879, 948 |
| BclI | TGATCA | 1 cut(s) | 1144 |
| BfaI | CTAG | 3 cut(s) | 423, 576, 657 |
| BfmI | CTRYAG | 1 cut(s) | 933 |
| BfrI | CTTAAG | 1 cut(s) | 800 |
| BfuAI | ACCTGC | 1 cut(s) | 204 |
| BisI | GCNGC | 3 cut(s) | 763, 941, 1380 |
| BlsI | GCNGC | 3 cut(s) | 764, 942, 1381 |
| Bme1390I | CCNGG | 2 cut(s) | 879, 948 |
| Bme18I | GGWCC | 1 cut(s) | 1282 |
| BmeT110I | CYCGRG | 1 cut(s) | 11 |
| BmgT120I | GGNCC | 3 cut(s) | 920, 1282, 1445 |
| BmiI | GGNNCC | 2 cut(s) | 1283, 1447 |
| BmrFI | CCNGG | 2 cut(s) | 879, 948 |
| BmrI | ACTGGG | 2 cut(s) | 480, 1443 |
| BmsI | GCATC | 4 cut(s) | 570, 952, 1366, 1391 |
| BmtI | GCTAGC | 1 cut(s) | 660 |
| BmuI | ACTGGG | 2 cut(s) | 480, 1443 |
| BpiI | GAAGAC | 2 cut(s) | 116, 581 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1413, 1443 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 1219, 1352, 1353 |
| Bse1I | ACTGG | 4 cut(s) | 450, 486, 1386, 1449 |
| Bse3DI | GCAATG | 2 cut(s) | 407, 782 |
| BseBI | CCWGG | 2 cut(s) | 879, 948 |
| BseGI | GGATG | 5 cut(s) | 503, 943, 975, 1382, 1405 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 1219, 1352, 1353 |
| BseMI | GCAATG | 2 cut(s) | 407, 782 |
| BseMII | CTCAG | 1 cut(s) | 546 |
| BseNI | ACTGG | 4 cut(s) | 450, 486, 1386, 1449 |
| BseRI | GAGGAG | 3 cut(s) | 732, 1325, 1418 |
| BseSI | GKGCMC | 1 cut(s) | 270 |
| BseXI | GCAGC | 3 cut(s) | 749, 927, 1391 |
| BseYI | CCCAGC | 1 cut(s) | 208 |
| BshFI | GGCC | 5 cut(s) | 567, 686, 922, 1055, 1446 |
| BsiHKCI | CYCGRG | 1 cut(s) | 11 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 1219, 1352, 1353 |
| BsmI | GAATGC | 1 cut(s) | 430 |
| BsnI | GGCC | 5 cut(s) | 567, 686, 922, 1055, 1446 |
| BsoBI | CYCGRG | 1 cut(s) | 11 |
| Bsp1286I | GDGCHC | 1 cut(s) | 270 |
| Bsp143I | GATC | 5 cut(s) | 448, 1064, 1099, 1114, 1144 |
| BspACI | CCGC | 3 cut(s) | 765, 1016, 1262 |
| BspANI | GGCC | 5 cut(s) | 567, 686, 922, 1055, 1446 |
| BspCNI | CTCAG | 1 cut(s) | 547 |
| BspLI | GGNNCC | 2 cut(s) | 1283, 1447 |
| BspMI | ACCTGC | 1 cut(s) | 204 |
| BspOI | GCTAGC | 1 cut(s) | 660 |
| BspPI | GGATC | 3 cut(s) | 456, 1107, 1122 |
| BspTI | CTTAAG | 1 cut(s) | 800 |
| BsrDI | GCAATG | 2 cut(s) | 407, 782 |
| BsrI | ACTGG | 4 cut(s) | 450, 486, 1386, 1449 |
| BssMI | GATC | 5 cut(s) | 448, 1064, 1099, 1114, 1144 |
| BssNAI | GTATAC | 1 cut(s) | 652 |
| Bst1107I | GTATAC | 1 cut(s) | 652 |
| Bst2UI | CCWGG | 2 cut(s) | 879, 948 |
| Bst4CI | ACNGT | 4 cut(s) | 88, 737, 818, 934 |
| BstAFI | CTTAAG | 1 cut(s) | 800 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1041 |
| BstC8I | GCNNGC | 4 cut(s) | 569, 611, 658, 1444 |
| BstDEI | CTNAG | 4 cut(s) | 452, 521, 555, 1461 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1217 |
| BstF5I | GGATG | 5 cut(s) | 503, 943, 975, 1382, 1405 |
| BstHHI | GCGC | 1 cut(s) | 1442 |
| BstKTI | GATC | 5 cut(s) | 451, 1067, 1102, 1117, 1147 |
| BstMBI | GATC | 5 cut(s) | 448, 1064, 1099, 1114, 1144 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 205, 1041, 1400 |
| BstNI | CCWGG | 2 cut(s) | 879, 948 |
| BstNSI | RCATGY | 1 cut(s) | 1228 |
| BstSCI | CCNGG | 2 cut(s) | 877, 946 |
| BstSFI | CTRYAG | 1 cut(s) | 933 |
| BstSLI | GKGCMC | 1 cut(s) | 270 |
| BstV1I | GCAGC | 3 cut(s) | 749, 927, 1391 |
| BstV2I | GAAGAC | 2 cut(s) | 116, 581 |
| BstX2I | RGATCY | 1 cut(s) | 448 |
| BstYI | RGATCY | 1 cut(s) | 448 |
| BstZ17I | GTATAC | 1 cut(s) | 652 |
| BsuRI | GGCC | 5 cut(s) | 567, 686, 922, 1055, 1446 |
| BtsCI | GGATG | 5 cut(s) | 503, 943, 975, 1382, 1405 |
| BtsI | GCAGTG | 1 cut(s) | 139 |
| BtsIMutI | CAGTG | 3 cut(s) | 139, 493, 1456 |
| BveI | ACCTGC | 1 cut(s) | 204 |
| Cac8I | GCNNGC | 4 cut(s) | 569, 611, 658, 1444 |
| CfoI | GCGC | 1 cut(s) | 1442 |
| Cfr13I | GGNCC | 3 cut(s) | 920, 1282, 1445 |
| Csp6I | GTAC | 3 cut(s) | 713, 901, 1216 |
| CviAII | CATG | 7 cut(s) | 215, 342, 641, 1163, 1225, 1229, 1247 |
| CviQI | GTAC | 3 cut(s) | 713, 901, 1216 |
| DdeI | CTNAG | 4 cut(s) | 452, 521, 555, 1461 |
| DpnI | GATC | 5 cut(s) | 450, 1066, 1101, 1116, 1146 |
| DpnII | GATC | 5 cut(s) | 448, 1064, 1099, 1114, 1144 |
| DraI | TTTAAA | 2 cut(s) | 322, 1204 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 585 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 585 |
| EaeI | YGGCCR | 2 cut(s) | 565, 684 |
| Eco47I | GGWCC | 1 cut(s) | 1282 |
| Eco57I | CTGAAG | 1 cut(s) | 575 |
| Eco88I | CYCGRG | 1 cut(s) | 11 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1217 |
| EcoO109I | RGGNCCY | 2 cut(s) | 920, 1445 |
| EcoRII | CCWGG | 2 cut(s) | 877, 946 |
| EcoT22I | ATGCAT | 1 cut(s) | 1230 |
| FaeI | CATG | 7 cut(s) | 218, 345, 644, 1166, 1228, 1232, 1250 |
| FatI | CATG | 7 cut(s) | 214, 341, 640, 1162, 1224, 1228, 1246 |
| FauI | CCCGC | 2 cut(s) | 758, 1023 |
| FbaI | TGATCA | 1 cut(s) | 1144 |
| FblI | GTMKAC | 1 cut(s) | 651 |
| Fnu4HI | GCNGC | 3 cut(s) | 763, 941, 1380 |
| FokI | GGATG | 5 cut(s) | 510, 930, 982, 1369, 1392 |
| Fsp4HI | GCNGC | 3 cut(s) | 763, 941, 1380 |
| FspBI | CTAG | 3 cut(s) | 423, 576, 657 |
| GlaI | GCGC | 1 cut(s) | 1441 |
| GluI | GCNGC | 3 cut(s) | 763, 941, 1380 |
| GsaI | CCCAGC | 1 cut(s) | 212 |
| HaeIII | GGCC | 5 cut(s) | 567, 686, 922, 1055, 1446 |
| HhaI | GCGC | 1 cut(s) | 1442 |
| Hin1II | CATG | 7 cut(s) | 218, 345, 644, 1166, 1228, 1232, 1250 |
| Hin6I | GCGC | 1 cut(s) | 1440 |
| HinP1I | GCGC | 1 cut(s) | 1440 |
| HincII | GTYRAC | 1 cut(s) | 55 |
| HindII | GTYRAC | 1 cut(s) | 55 |
| HindIII | AAGCTT | 3 cut(s) | 185, 233, 611 |
| HinfI | GANTC | 4 cut(s) | 329, 975, 1240, 1258 |
| HphI | GGTGA | 4 cut(s) | 324, 899, 970, 1201 |
| Hpy166II | GTNNAC | 3 cut(s) | 55, 652, 957 |
| Hpy188I | TCNGA | 1 cut(s) | 927 |
| Hpy188III | TCNNGA | 3 cut(s) | 11, 13, 26 |
| Hpy8I | GTNNAC | 3 cut(s) | 55, 652, 957 |
| HpyAV | CCTTC | 4 cut(s) | 23, 991, 1045, 1327 |
| HpyCH4III | ACNGT | 4 cut(s) | 88, 737, 818, 934 |
| HpyCH4IV | ACGT | 2 cut(s) | 811, 1149 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 205, 1041, 1400 |
| HpyF3I | CTNAG | 4 cut(s) | 452, 521, 555, 1461 |
| HpySE526I | ACGT | 2 cut(s) | 811, 1149 |
| Hsp92II | CATG | 7 cut(s) | 218, 345, 644, 1166, 1228, 1232, 1250 |
| HspAI | GCGC | 1 cut(s) | 1440 |
| Ksp22I | TGATCA | 1 cut(s) | 1144 |
| Kzo9I | GATC | 5 cut(s) | 448, 1064, 1099, 1114, 1144 |
| LmnI | GCTCC | 4 cut(s) | 576, 880, 1032, 1312 |
| Lsp1109I | GCAGC | 3 cut(s) | 749, 927, 1391 |
| LweI | GCATC | 4 cut(s) | 570, 952, 1366, 1391 |
| MaeI | CTAG | 3 cut(s) | 423, 576, 657 |
| MaeII | ACGT | 2 cut(s) | 811, 1149 |
| MaeIII | GTNAC | 6 cut(s) | 330, 386, 455, 731, 812, 1088 |
| MalI | GATC | 5 cut(s) | 450, 1066, 1101, 1116, 1146 |
| MboI | GATC | 5 cut(s) | 448, 1064, 1099, 1114, 1144 |
| MboII | GAAGA | 5 cut(s) | 116, 581, 813, 1120, 1313 |
| MfeI | CAATTG | 1 cut(s) | 63 |
| MflI | RGATCY | 1 cut(s) | 448 |
| MhlI | GDGCHC | 1 cut(s) | 270 |
| MlsI | TGGCCA | 1 cut(s) | 686 |
| MluCI | AATT | 8 cut(s) | 63, 302, 516, 539, 706, 841, 1039, 1416 |
| MluNI | TGGCCA | 1 cut(s) | 686 |
| MlyI | GAGTC | 1 cut(s) | 338 |
| MmeI | TCCRAC | 3 cut(s) | 295, 576, 1092 |
| Mox20I | TGGCCA | 1 cut(s) | 686 |
| Mph1103I | ATGCAT | 1 cut(s) | 1230 |
| MroXI | GAANNNNTTC | 2 cut(s) | 306, 588 |
| MscI | TGGCCA | 1 cut(s) | 686 |
| MseI | TTAA | 8 cut(s) | 146, 321, 512, 546, 801, 1038, 1203, 1419 |
| MslI | CAYNNNNRTG | 4 cut(s) | 412, 912, 1165, 1368 |
| Msp20I | TGGCCA | 1 cut(s) | 686 |
| MspCI | CTTAAG | 1 cut(s) | 800 |
| MspR9I | CCNGG | 2 cut(s) | 879, 948 |
| MunI | CAATTG | 1 cut(s) | 63 |
| Mva1269I | GAATGC | 1 cut(s) | 430 |
| MvaI | CCWGG | 2 cut(s) | 879, 948 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 205, 1041, 1400 |
| NdeII | GATC | 5 cut(s) | 448, 1064, 1099, 1114, 1144 |
| NheI | GCTAGC | 1 cut(s) | 656 |
| NlaIII | CATG | 7 cut(s) | 218, 345, 644, 1166, 1228, 1232, 1250 |
| NlaIV | GGNNCC | 2 cut(s) | 1283, 1447 |
| NmuCI | GTSAC | 3 cut(s) | 330, 386, 455 |
| NsiI | ATGCAT | 1 cut(s) | 1230 |
| NspI | RCATGY | 1 cut(s) | 1228 |
| OliI | CACNNNNGTG | 2 cut(s) | 912, 1165 |
| PaeR7I | CTCGAG | 1 cut(s) | 11 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 822 |
| PctI | GAATGC | 1 cut(s) | 430 |
| PdmI | GAANNNNTTC | 2 cut(s) | 306, 588 |
| PfeI | GAWTC | 3 cut(s) | 975, 1240, 1258 |
| PfoI | TCCNGGA | 1 cut(s) | 877 |
| PkrI | GCNGC | 3 cut(s) | 764, 942, 1381 |
| PleI | GAGTC | 1 cut(s) | 337 |
| PpsI | GAGTC | 1 cut(s) | 337 |
| PshBI | ATTAAT | 1 cut(s) | 1038 |
| Psp1406I | AACGTT | 1 cut(s) | 811 |
| Psp6I | CCWGG | 2 cut(s) | 877, 946 |
| PspFI | CCCAGC | 1 cut(s) | 208 |
| PspGI | CCWGG | 2 cut(s) | 877, 946 |
| PspN4I | GGNNCC | 2 cut(s) | 1283, 1447 |
| PspPI | GGNCC | 3 cut(s) | 920, 1282, 1445 |
| PsuI | RGATCY | 1 cut(s) | 448 |
| RsaI | GTAC | 3 cut(s) | 714, 902, 1217 |
| RsaNI | GTAC | 3 cut(s) | 713, 901, 1216 |
| RseI | CAYNNNNRTG | 4 cut(s) | 412, 912, 1165, 1368 |
| SaqAI | TTAA | 8 cut(s) | 146, 321, 512, 546, 801, 1038, 1203, 1419 |
| SatI | GCNGC | 3 cut(s) | 763, 941, 1380 |
| Sau3AI | GATC | 5 cut(s) | 448, 1064, 1099, 1114, 1144 |
| Sau96I | GGNCC | 3 cut(s) | 920, 1282, 1445 |
| SchI | GAGTC | 1 cut(s) | 338 |
| ScrFI | CCNGG | 2 cut(s) | 879, 948 |
| SduI | GDGCHC | 1 cut(s) | 270 |
| SfaNI | GCATC | 4 cut(s) | 570, 952, 1366, 1391 |
| SfcI | CTRYAG | 1 cut(s) | 933 |
| Sfr274I | CTCGAG | 1 cut(s) | 11 |
| SinI | GGWCC | 1 cut(s) | 1282 |
| SlaI | CTCGAG | 1 cut(s) | 11 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 412, 912, 1165, 1368 |
| SmlI | CTYRAG | 2 cut(s) | 11, 800 |
| SmoI | CTYRAG | 2 cut(s) | 11, 800 |
| Sse9I | AATT | 8 cut(s) | 63, 302, 516, 539, 706, 841, 1039, 1416 |
| SsiI | CCGC | 3 cut(s) | 765, 1016, 1262 |
| SspMI | CTAG | 3 cut(s) | 423, 576, 657 |
| StyD4I | CCNGG | 2 cut(s) | 877, 946 |
| TaaI | ACNGT | 4 cut(s) | 88, 737, 818, 934 |
| TaiI | ACGT | 2 cut(s) | 814, 1152 |
| TaqI | TCGA | 2 cut(s) | 12, 1102 |
| TasI | AATT | 8 cut(s) | 63, 302, 516, 539, 706, 841, 1039, 1416 |
| TfiI | GAWTC | 3 cut(s) | 975, 1240, 1258 |
| Tru1I | TTAA | 8 cut(s) | 146, 321, 512, 546, 801, 1038, 1203, 1419 |
| Tru9I | TTAA | 8 cut(s) | 146, 321, 512, 546, 801, 1038, 1203, 1419 |
| TscAI | CASTG | 3 cut(s) | 139, 493, 1456 |
| TseFI | GTSAC | 3 cut(s) | 330, 386, 455 |
| TseI | GCWGC | 3 cut(s) | 762, 940, 1379 |
| Tsp45I | GTSAC | 3 cut(s) | 330, 386, 455 |
| TspGWI | ACGGA | 2 cut(s) | 814, 1274 |
| TspRI | CASTG | 3 cut(s) | 139, 493, 1456 |
| Vha464I | CTTAAG | 1 cut(s) | 800 |
| VpaK11BI | GGWCC | 1 cut(s) | 1282 |
| VspI | ATTAAT | 1 cut(s) | 1038 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1217 |
| XceI | RCATGY | 1 cut(s) | 1228 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 642 |
| XhoI | CTCGAG | 1 cut(s) | 11 |
| XmiI | GTMKAC | 1 cut(s) | 651 |
| XmnI | GAANNNNTTC | 2 cut(s) | 306, 588 |
| XspI | CTAG | 3 cut(s) | 423, 576, 657 |
| Zsp2I | ATGCAT | 1 cut(s) | 1230 |