TMV resistance protein N-like
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1142 |
| AarI | CACCTGC | 1 cut(s) | 1518 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 2994 |
| AatII | GACGTC | 2 cut(s) | 642, 1560 |
| Acc36I | ACCTGC | 2 cut(s) | 1518, 1716 |
| AccB1I | GGYRCC | 2 cut(s) | 2532, 3622 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1483 |
| AccI | GTMKAC | 3 cut(s) | 1635, 2476, 2580 |
| AccII | CGCG | 1 cut(s) | 3037 |
| AccIII | TCCGGA | 2 cut(s) | 3373, 3418 |
| AciI | CCGC | 7 cut(s) | 433, 643, 669, 941, 1501, 2906, 4320 |
| AclWI | GGATC | 9 cut(s) | 152, 338, 1199, 2281, 3018, 3783, 3796, 4239, 4356 |
| AcoI | YGGCCR | 2 cut(s) | 2494, 2613 |
| AcuI | CTGAAG | 9 cut(s) | 477, 1052, 1128, 1323, 1611, 1709, 2421, 3690, 4083 |
| AcyI | GRCGYC | 2 cut(s) | 639, 1557 |
| AfaI | GTAC | 8 cut(s) | 357, 1179, 1374, 2792, 3407, 3577, 3904, 3919 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 1483, 1714, 2806, 2909, 2910, 2911, 3253 |
| AflII | CTTAAG | 1 cut(s) | 2720 |
| AflIII | ACRYGT | 2 cut(s) | 1564, 1644 |
| AjiI | CACGTC | 2 cut(s) | 1639, 1645 |
| AjnI | CCWGG | 4 cut(s) | 2767, 2836, 2870, 2908 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 564, 596, 3584, 3616 |
| AleI | CACNNNNGTG | 1 cut(s) | 2802 |
| Alw21I | GWGCWC | 1 cut(s) | 8 |
| Alw26I | GTCTC | 3 cut(s) | 1653, 1830, 2093 |
| AlwI | GGATC | 9 cut(s) | 152, 338, 1199, 2281, 3018, 3783, 3796, 4239, 4356 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1807 |
| Ama87I | CYCGRG | 2 cut(s) | 1946, 2483 |
| Aor13HI | TCCGGA | 2 cut(s) | 3373, 3418 |
| AoxI | GGCC | 4 cut(s) | 2494, 2613, 3110, 3673 |
| ApeKI | GCWGC | 6 cut(s) | 203, 322, 1807, 2830, 3305, 3715 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2299, 2331 |
| AseI | ATTAAT | 3 cut(s) | 1887, 3231, 4476 |
| Asp700I | GAANNNNTTC | 5 cut(s) | 1088, 1116, 1316, 1728, 3138 |
| AspLEI | GCGC | 1 cut(s) | 3037 |
| AspS9I | GGNCC | 1 cut(s) | 3160 |
| AsuC2I | CCSGG | 1 cut(s) | 1505 |
| AsuII | TTCGAA | 1 cut(s) | 3760 |
| AvaI | CYCGRG | 2 cut(s) | 1946, 2483 |
| AvaII | GGWCC | 1 cut(s) | 3160 |
| AxyI | CCTNAGG | 1 cut(s) | 1713 |
| BalI | TGGCCA | 1 cut(s) | 2615 |
| BamHI | GGATCC | 1 cut(s) | 3788 |
| BanI | GGYRCC | 2 cut(s) | 2532, 3622 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2683, 2715 |
| BauI | CACGAG | 1 cut(s) | 281 |
| BbsI | GAAGAC | 6 cut(s) | 1151, 1459, 1560, 2427, 2805, 4451 |
| Bbv12I | GWGCWC | 1 cut(s) | 8 |
| BbvI | GCAGC | 6 cut(s) | 190, 309, 1794, 2817, 3317, 3702 |
| BccI | CCATC | 7 cut(s) | 31, 591, 1792, 2854, 3778, 4180, 4475 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 2316, 2350, 4313, 4347 |
| BciT130I | CCWGG | 4 cut(s) | 2769, 2838, 2872, 2910 |
| BciVI | GTATCC | 4 cut(s) | 1776, 3259, 4002, 4296 |
| BcnI | CCSGG | 1 cut(s) | 1505 |
| BcoDI | GTCTC | 3 cut(s) | 1653, 1830, 2093 |
| BfrI | CTTAAG | 1 cut(s) | 2720 |
| BfuAI | ACCTGC | 2 cut(s) | 1518, 1716 |
| BfuI | GTATCC | 4 cut(s) | 1776, 3259, 4002, 4296 |
| BglII | AGATCT | 2 cut(s) | 1427, 2095 |
| BisI | GCNGC | 7 cut(s) | 204, 323, 1808, 2831, 3306, 3716, 4321 |
| BlpI | GCTNAGC | 1 cut(s) | 3969 |
| BlsI | GCNGC | 7 cut(s) | 205, 324, 1809, 2832, 3307, 3717, 4322 |
| BmcAI | AGTACT | 2 cut(s) | 1179, 1374 |
| Bme1390I | CCNGG | 5 cut(s) | 1505, 2769, 2838, 2872, 2910 |
| Bme18I | GGWCC | 1 cut(s) | 3160 |
| BmeT110I | CYCGRG | 2 cut(s) | 1946, 2483 |
| BmgBI | CACGTC | 2 cut(s) | 1639, 1645 |
| BmgT120I | GGNCC | 1 cut(s) | 3160 |
| BmiI | GGNNCC | 6 cut(s) | 853, 1706, 2534, 3161, 3624, 3790 |
| BmrFI | CCNGG | 5 cut(s) | 1505, 2769, 2838, 2872, 2910 |
| BmrI | ACTGGG | 2 cut(s) | 1247, 2409 |
| BmsI | GCATC | 8 cut(s) | 263, 610, 1452, 2417, 2499, 2705, 2842, 3172 |
| BmuI | ACTGGG | 2 cut(s) | 1247, 2409 |
| BpiI | GAAGAC | 6 cut(s) | 1151, 1459, 1560, 2427, 2805, 4451 |
| BplI | GAGNNNNNCTC | 8 cut(s) | 211, 243, 698, 730, 1885, 1917, 2549, 2581 |
| BpmI | CTGGAG | 2 cut(s) | 174, 4364 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 3969 |
| Bpu14I | TTCGAA | 1 cut(s) | 3760 |
| BpuEI | CTTGAG | 5 cut(s) | 577, 3605, 4070, 4211, 4327 |
| BpuMI | CCSGG | 1 cut(s) | 1505 |
| BsaBI | GATNNNNATC | 3 cut(s) | 342, 2100, 2391 |
| BsaHI | GRCGYC | 2 cut(s) | 639, 1557 |
| BsaJI | CCNNGG | 4 cut(s) | 2909, 3792, 4356, 4500 |
| BsaWI | WCCGGW | 3 cut(s) | 3373, 3418, 4276 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1623, 1653, 4352, 4382 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 1483, 1714, 2806, 2909, 2910, 2911, 3253 |
| Bse118I | RCCGGY | 1 cut(s) | 3108 |
| Bse1I | ACTGG | 9 cut(s) | 605, 1242, 1380, 1588, 2415, 2670, 3065, 3995, 4370 |
| Bse21I | CCTNAGG | 1 cut(s) | 1713 |
| Bse3DI | GCAATG | 3 cut(s) | 1326, 2415, 3248 |
| Bse8I | GATNNNNATC | 3 cut(s) | 342, 2100, 2391 |
| BseAI | TCCGGA | 2 cut(s) | 3373, 3418 |
| BseBI | CCWGG | 4 cut(s) | 2769, 2838, 2872, 2910 |
| BseDI | CCNNGG | 4 cut(s) | 2909, 3792, 4356, 4500 |
| BseGI | GGATG | 9 cut(s) | 160, 601, 640, 1467, 2143, 2258, 2833, 2865, 3895 |
| BseJI | GATNNNNATC | 3 cut(s) | 342, 2100, 2391 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 1483, 1714, 2806, 2909, 2910, 2911, 3253 |
| BseMI | GCAATG | 3 cut(s) | 1326, 2415, 3248 |
| BseMII | CTCAG | 8 cut(s) | 59, 59, 1814, 1883, 2470, 2930, 3983, 4413 |
| BseNI | ACTGG | 9 cut(s) | 605, 1242, 1380, 1588, 2415, 2670, 3065, 3995, 4370 |
| BseRI | GAGGAG | 6 cut(s) | 33, 2882, 3203, 3602, 4102, 4324 |
| BseXI | GCAGC | 6 cut(s) | 190, 309, 1794, 2817, 3317, 3702 |
| BseYI | CCCAGC | 1 cut(s) | 1522 |
| BsgI | GTGCAG | 1 cut(s) | 1552 |
| Bsh1236I | CGCG | 1 cut(s) | 3037 |
| BshFI | GGCC | 4 cut(s) | 2496, 2615, 3112, 3675 |
| BshNI | GGYRCC | 2 cut(s) | 2532, 3622 |
| BsiHKAI | GWGCWC | 1 cut(s) | 8 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1946, 2483 |
| BsiSI | CCGG | 7 cut(s) | 1504, 2135, 2324, 3109, 3374, 3419, 4277 |
| BslFI | GGGAC | 3 cut(s) | 1500, 1731, 3000 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 1483, 1714, 2806, 2909, 2910, 2911, 3253 |
| BsmAI | GTCTC | 3 cut(s) | 1653, 1830, 2093 |
| BsmFI | GGGAC | 3 cut(s) | 1500, 1731, 3000 |
| BsmI | GAATGC | 1 cut(s) | 2359 |
| BsnI | GGCC | 4 cut(s) | 2496, 2615, 3112, 3675 |
| BsoBI | CYCGRG | 2 cut(s) | 1946, 2483 |
| Bsp119I | TTCGAA | 1 cut(s) | 3760 |
| Bsp1286I | GDGCHC | 1 cut(s) | 8 |
| Bsp13I | TCCGGA | 2 cut(s) | 3373, 3418 |
| Bsp1407I | TGTACA | 1 cut(s) | 355 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 3969 |
| Bsp19I | CCATGG | 1 cut(s) | 4500 |
| BspACI | CCGC | 7 cut(s) | 433, 643, 669, 941, 1501, 2906, 4320 |
| BspANI | GGCC | 4 cut(s) | 2496, 2615, 3112, 3675 |
| BspCNI | CTCAG | 8 cut(s) | 58, 60, 1813, 1884, 2469, 2931, 3982, 4414 |
| BspEI | TCCGGA | 2 cut(s) | 3373, 3418 |
| BspFNI | CGCG | 1 cut(s) | 3037 |
| BspHI | TCATGA | 1 cut(s) | 397 |
| BspLI | GGNNCC | 6 cut(s) | 853, 1706, 2534, 3161, 3624, 3790 |
| BspMI | ACCTGC | 2 cut(s) | 1518, 1716 |
| BspPI | GGATC | 9 cut(s) | 152, 338, 1199, 2281, 3018, 3783, 3796, 4239, 4356 |
| BspT104I | TTCGAA | 1 cut(s) | 3760 |
| BspT107I | GGYRCC | 2 cut(s) | 2532, 3622 |
| BspTI | CTTAAG | 1 cut(s) | 2720 |
| BsrDI | GCAATG | 3 cut(s) | 1326, 2415, 3248 |
| BsrFI | RCCGGY | 1 cut(s) | 3108 |
| BsrGI | TGTACA | 1 cut(s) | 355 |
| BsrI | ACTGG | 9 cut(s) | 605, 1242, 1380, 1588, 2415, 2670, 3065, 3995, 4370 |
| BssAI | RCCGGY | 1 cut(s) | 3108 |
| BssECI | CCNNGG | 4 cut(s) | 2909, 3792, 4356, 4500 |
| BssNI | GRCGYC | 2 cut(s) | 639, 1557 |
| BssSI | CACGAG | 1 cut(s) | 281 |
| BssT1I | CCWWGG | 3 cut(s) | 3792, 4356, 4500 |
| Bst2BI | CACGAG | 1 cut(s) | 281 |
| Bst2UI | CCWGG | 4 cut(s) | 2769, 2838, 2872, 2910 |
| Bst6I | CTCTTC | 8 cut(s) | 417, 1071, 1237, 1299, 3623, 3767, 4059, 4448 |
| BstACI | GRCGYC | 2 cut(s) | 639, 1557 |
| BstAFI | CTTAAG | 1 cut(s) | 2720 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 200, 1471 |
| BstAUI | TGTACA | 1 cut(s) | 355 |
| BstBI | TTCGAA | 1 cut(s) | 3760 |
| BstC8I | GCNNGC | 1 cut(s) | 3110 |
| BstDSI | CCRYGG | 1 cut(s) | 4500 |
| BstEII | GGTNACC | 1 cut(s) | 2265 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 1712, 3251 |
| BstF5I | GGATG | 9 cut(s) | 160, 601, 640, 1467, 2143, 2258, 2833, 2865, 3895 |
| BstFNI | CGCG | 1 cut(s) | 3037 |
| BstHHI | GCGC | 1 cut(s) | 3037 |
| BstMAI | GTCTC | 3 cut(s) | 1653, 1830, 2093 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 200, 314, 824, 1471, 3043, 3225, 3935 |
| BstNI | CCWGG | 4 cut(s) | 2769, 2838, 2872, 2910 |
| BstNSI | RCATGY | 2 cut(s) | 1335, 1568 |
| BstPI | GGTNACC | 1 cut(s) | 2265 |
| BstSCI | CCNGG | 5 cut(s) | 1503, 2767, 2836, 2870, 2908 |
| BstUI | CGCG | 1 cut(s) | 3037 |
| BstV1I | GCAGC | 6 cut(s) | 190, 309, 1794, 2817, 3317, 3702 |
| BstV2I | GAAGAC | 6 cut(s) | 1151, 1459, 1560, 2427, 2805, 4451 |
| BstX2I | RGATCY | 4 cut(s) | 1427, 2095, 3788, 4348 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1215 |
| BstYI | RGATCY | 4 cut(s) | 1427, 2095, 3788, 4348 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1713 |
| BsuI | GTATCC | 4 cut(s) | 1776, 3259, 4002, 4296 |
| BsuRI | GGCC | 4 cut(s) | 2496, 2615, 3112, 3675 |
| BtgI | CCRYGG | 1 cut(s) | 4500 |
| BtrI | CACGTC | 2 cut(s) | 1639, 1645 |
| BtsCI | GGATG | 9 cut(s) | 160, 601, 640, 1467, 2143, 2258, 2833, 2865, 3895 |
| BtsI | GCAGTG | 2 cut(s) | 117, 2074 |
| BtsIMutI | CAGTG | 6 cut(s) | 53, 117, 2074, 2422, 2996, 3564 |
| BveI | ACCTGC | 2 cut(s) | 1518, 1716 |
| Cac8I | GCNNGC | 1 cut(s) | 3110 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1807 |
| CciI | TCATGA | 1 cut(s) | 397 |
| CfoI | GCGC | 1 cut(s) | 3037 |
| Cfr10I | RCCGGY | 1 cut(s) | 3108 |
| Cfr13I | GGNCC | 1 cut(s) | 3160 |
| CseI | GACGC | 1 cut(s) | 2591 |
| Csp6I | GTAC | 8 cut(s) | 356, 1178, 1373, 2791, 3406, 3576, 3903, 3918 |
| CviQI | GTAC | 8 cut(s) | 356, 1178, 1373, 2791, 3406, 3576, 3903, 3918 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 2994 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 2994 |
| EaeI | YGGCCR | 2 cut(s) | 2494, 2613 |
| Eam1104I | CTCTTC | 8 cut(s) | 417, 1071, 1237, 1299, 3623, 3767, 4059, 4448 |
| EarI | CTCTTC | 8 cut(s) | 417, 1071, 1237, 1299, 3623, 3767, 4059, 4448 |
| EciI | GGCGGA | 1 cut(s) | 1490 |
| Eco130I | CCWWGG | 3 cut(s) | 3792, 4356, 4500 |
| Eco32I | GATATC | 1 cut(s) | 3070 |
| Eco47I | GGWCC | 1 cut(s) | 3160 |
| Eco57I | CTGAAG | 9 cut(s) | 477, 1052, 1128, 1323, 1611, 1709, 2421, 3690, 4083 |
| Eco81I | CCTNAGG | 1 cut(s) | 1713 |
| Eco88I | CYCGRG | 2 cut(s) | 1946, 2483 |
| Eco91I | GGTNACC | 1 cut(s) | 2265 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 1712, 3251 |
| EcoO65I | GGTNACC | 1 cut(s) | 2265 |
| EcoRI | GAATTC | 5 cut(s) | 288, 481, 1654, 2237, 3134 |
| EcoRII | CCWGG | 4 cut(s) | 2767, 2836, 2870, 2908 |
| EcoRV | GATATC | 1 cut(s) | 3070 |
| EcoT14I | CCWWGG | 3 cut(s) | 3792, 4356, 4500 |
| EcoT22I | ATGCAT | 1 cut(s) | 256 |
| ErhI | CCWWGG | 3 cut(s) | 3792, 4356, 4500 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1104, 1136 |
| FaqI | GGGAC | 3 cut(s) | 1500, 1731, 3000 |
| FauI | CCCGC | 3 cut(s) | 662, 934, 2913 |
| FauNDI | CATATG | 1 cut(s) | 3748 |
| FblI | GTMKAC | 3 cut(s) | 1635, 2476, 2580 |
| Fnu4HI | GCNGC | 7 cut(s) | 204, 323, 1808, 2831, 3306, 3716, 4321 |
| FokI | GGATG | 9 cut(s) | 167, 588, 647, 1474, 2150, 2265, 2820, 2872, 3902 |
| Fsp4HI | GCNGC | 7 cut(s) | 204, 323, 1808, 2831, 3306, 3716, 4321 |
| GlaI | GCGC | 1 cut(s) | 3036 |
| GluI | GCNGC | 7 cut(s) | 204, 323, 1808, 2831, 3306, 3716, 4321 |
| GsaI | CCCAGC | 1 cut(s) | 1526 |
| GsuI | CTGGAG | 2 cut(s) | 174, 4364 |
| HaeIII | GGCC | 4 cut(s) | 2496, 2615, 3112, 3675 |
| HapII | CCGG | 7 cut(s) | 1504, 2135, 2324, 3109, 3374, 3419, 4277 |
| HgaI | GACGC | 1 cut(s) | 2591 |
| HhaI | GCGC | 1 cut(s) | 3037 |
| Hin1I | GRCGYC | 2 cut(s) | 639, 1557 |
| Hin6I | GCGC | 1 cut(s) | 3035 |
| HinP1I | GCGC | 1 cut(s) | 3035 |
| HincII | GTYRAC | 5 cut(s) | 261, 1915, 1990, 2653, 2999 |
| HindII | GTYRAC | 5 cut(s) | 261, 1915, 1990, 2653, 2999 |
| HindIII | AAGCTT | 5 cut(s) | 1086, 1819, 2120, 2168, 2540 |
| HpaI | GTTAAC | 1 cut(s) | 2653 |
| HpaII | CCGG | 7 cut(s) | 1504, 2135, 2324, 3109, 3374, 3419, 4277 |
| Hpy99I | CGWCG | 2 cut(s) | 1292, 2640 |
| HpyCH4IV | ACGT | 6 cut(s) | 639, 1015, 1557, 1638, 1644, 4097 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 200, 314, 824, 1471, 3043, 3225, 3935 |
| HpySE526I | ACGT | 6 cut(s) | 639, 1015, 1557, 1638, 1644, 4097 |
| Hsp92I | GRCGYC | 2 cut(s) | 639, 1557 |
| HspAI | GCGC | 1 cut(s) | 3035 |
| Kpn2I | TCCGGA | 2 cut(s) | 3373, 3418 |
| KroI | GCCGGC | 1 cut(s) | 3108 |
| KroNI | GCCGGC | 1 cut(s) | 3110 |
| KspAI | GTTAAC | 1 cut(s) | 2653 |
| LmnI | GCTCC | 3 cut(s) | 851, 1479, 3190 |
| Lsp1109I | GCAGC | 6 cut(s) | 190, 309, 1794, 2817, 3317, 3702 |
| LweI | GCATC | 8 cut(s) | 263, 610, 1452, 2417, 2499, 2705, 2842, 3172 |
| MaeII | ACGT | 6 cut(s) | 639, 1015, 1557, 1638, 1644, 4097 |
| MfeI | CAATTG | 4 cut(s) | 207, 1998, 3849, 4435 |
| MflI | RGATCY | 4 cut(s) | 1427, 2095, 3788, 4348 |
| MhlI | GDGCHC | 1 cut(s) | 8 |
| MlsI | TGGCCA | 1 cut(s) | 2615 |
| MluNI | TGGCCA | 1 cut(s) | 2615 |
| MlyI | GAGTC | 5 cut(s) | 1610, 2734, 4321, 4433, 4465 |
| MmeI | TCCRAC | 2 cut(s) | 562, 2988 |
| Mox20I | TGGCCA | 1 cut(s) | 2615 |
| Mph1103I | ATGCAT | 1 cut(s) | 256 |
| MroI | TCCGGA | 2 cut(s) | 3373, 3418 |
| MroNI | GCCGGC | 1 cut(s) | 3108 |
| MroXI | GAANNNNTTC | 5 cut(s) | 1088, 1116, 1316, 1728, 3138 |
| MscI | TGGCCA | 1 cut(s) | 2615 |
| MslI | CAYNNNNRTG | 3 cut(s) | 1610, 2802, 3948 |
| Msp20I | TGGCCA | 1 cut(s) | 2615 |
| MspA1I | CMGCKG | 1 cut(s) | 4214 |
| MspCI | CTTAAG | 1 cut(s) | 2720 |
| MspI | CCGG | 7 cut(s) | 1504, 2135, 2324, 3109, 3374, 3419, 4277 |
| MspR9I | CCNGG | 5 cut(s) | 1505, 2769, 2838, 2872, 2910 |
| MunI | CAATTG | 4 cut(s) | 207, 1998, 3849, 4435 |
| Mva1269I | GAATGC | 1 cut(s) | 2359 |
| MvaI | CCWGG | 4 cut(s) | 2769, 2838, 2872, 2910 |
| MvnI | CGCG | 1 cut(s) | 3037 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 200, 314, 824, 1471, 3043, 3225, 3935 |
| NaeI | GCCGGC | 1 cut(s) | 3110 |
| NciI | CCSGG | 1 cut(s) | 1505 |
| NcoI | CCATGG | 1 cut(s) | 4500 |
| NdeI | CATATG | 1 cut(s) | 3748 |
| NgoMIV | GCCGGC | 1 cut(s) | 3108 |
| NlaIV | GGNNCC | 6 cut(s) | 853, 1706, 2534, 3161, 3624, 3790 |
| NmuCI | GTSAC | 5 cut(s) | 416, 2265, 2315, 4093, 4178 |
| NsiI | ATGCAT | 1 cut(s) | 256 |
| NspI | RCATGY | 2 cut(s) | 1335, 1568 |
| NspV | TTCGAA | 1 cut(s) | 3760 |
| OliI | CACNNNNGTG | 1 cut(s) | 2802 |
| PaeR7I | CTCGAG | 1 cut(s) | 1946 |
| PagI | TCATGA | 1 cut(s) | 397 |
| PaqCI | CACCTGC | 1 cut(s) | 1518 |
| PciI | ACATGT | 1 cut(s) | 1564 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1766 |
| PctI | GAATGC | 1 cut(s) | 2359 |
| PdiI | GCCGGC | 1 cut(s) | 3110 |
| PdmI | GAANNNNTTC | 5 cut(s) | 1088, 1116, 1316, 1728, 3138 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1483 |
| PfoI | TCCNGGA | 1 cut(s) | 2767 |
| PkrI | GCNGC | 7 cut(s) | 205, 324, 1809, 2832, 3307, 3717, 4322 |
| PleI | GAGTC | 5 cut(s) | 1610, 2733, 4320, 4432, 4464 |
| PpsI | GAGTC | 5 cut(s) | 1610, 2733, 4320, 4432, 4464 |
| PscI | ACATGT | 1 cut(s) | 1564 |
| PshBI | ATTAAT | 3 cut(s) | 1887, 3231, 4476 |
| PsiI | TTATAA | 1 cut(s) | 1142 |
| Psp6I | CCWGG | 4 cut(s) | 2767, 2836, 2870, 2908 |
| PspEI | GGTNACC | 1 cut(s) | 2265 |
| PspFI | CCCAGC | 1 cut(s) | 1522 |
| PspGI | CCWGG | 4 cut(s) | 2767, 2836, 2870, 2908 |
| PspN4I | GGNNCC | 6 cut(s) | 853, 1706, 2534, 3161, 3624, 3790 |
| PspPI | GGNCC | 1 cut(s) | 3160 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1807 |
| PsuI | RGATCY | 4 cut(s) | 1427, 2095, 3788, 4348 |
| PvuII | CAGCTG | 1 cut(s) | 4214 |
| RsaI | GTAC | 8 cut(s) | 357, 1179, 1374, 2792, 3407, 3577, 3904, 3919 |
| RsaNI | GTAC | 8 cut(s) | 356, 1178, 1373, 2791, 3406, 3576, 3903, 3918 |
| RseI | CAYNNNNRTG | 3 cut(s) | 1610, 2802, 3948 |
| SatI | GCNGC | 7 cut(s) | 204, 323, 1808, 2831, 3306, 3716, 4321 |
| Sau96I | GGNCC | 1 cut(s) | 3160 |
| ScaI | AGTACT | 2 cut(s) | 1179, 1374 |
| SchI | GAGTC | 5 cut(s) | 1610, 2734, 4321, 4433, 4465 |
| ScrFI | CCNGG | 5 cut(s) | 1505, 2769, 2838, 2872, 2910 |
| SduI | GDGCHC | 1 cut(s) | 8 |
| SfaNI | GCATC | 8 cut(s) | 263, 610, 1452, 2417, 2499, 2705, 2842, 3172 |
| Sfr274I | CTCGAG | 1 cut(s) | 1946 |
| SfuI | TTCGAA | 1 cut(s) | 3760 |
| SinI | GGWCC | 1 cut(s) | 3160 |
| SlaI | CTCGAG | 1 cut(s) | 1946 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 1610, 2802, 3948 |
| SmlI | CTYRAG | 7 cut(s) | 592, 1946, 2720, 3584, 4049, 4226, 4306 |
| SmoI | CTYRAG | 7 cut(s) | 592, 1946, 2720, 3584, 4049, 4226, 4306 |
| SsiI | CCGC | 7 cut(s) | 433, 643, 669, 941, 1501, 2906, 4320 |
| SspI | AATATT | 3 cut(s) | 935, 1317, 3223 |
| StyD4I | CCNGG | 5 cut(s) | 1503, 2767, 2836, 2870, 2908 |
| StyI | CCWWGG | 3 cut(s) | 3792, 4356, 4500 |
| TaiI | ACGT | 6 cut(s) | 642, 1018, 1560, 1641, 1647, 4100 |
| TatI | WGTACW | 3 cut(s) | 355, 1177, 1372 |
| TauI | GCSGC | 1 cut(s) | 4323 |
| TscAI | CASTG | 6 cut(s) | 53, 124, 2074, 2422, 2996, 3564 |
| TseFI | GTSAC | 5 cut(s) | 416, 2265, 2315, 4093, 4178 |
| TseI | GCWGC | 6 cut(s) | 203, 322, 1807, 2830, 3305, 3715 |
| Tsp45I | GTSAC | 5 cut(s) | 416, 2265, 2315, 4093, 4178 |
| TspGWI | ACGGA | 6 cut(s) | 751, 1758, 1759, 3152, 3935, 4278 |
| TspRI | CASTG | 6 cut(s) | 53, 124, 2074, 2422, 2996, 3564 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1483 |
| Vha464I | CTTAAG | 1 cut(s) | 2720 |
| VpaK11BI | GGWCC | 1 cut(s) | 3160 |
| VspI | ATTAAT | 3 cut(s) | 1887, 3231, 4476 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 1712, 3251 |
| XbaI | TCTAGA | 3 cut(s) | 1294, 2504, 3439 |
| XceI | RCATGY | 2 cut(s) | 1335, 1568 |
| XhoI | CTCGAG | 1 cut(s) | 1946 |
| XmiI | GTMKAC | 3 cut(s) | 1635, 2476, 2580 |
| XmnI | GAANNNNTTC | 5 cut(s) | 1088, 1116, 1316, 1728, 3138 |
| ZraI | GACGTC | 2 cut(s) | 640, 1558 |
| ZrmI | AGTACT | 2 cut(s) | 1179, 1374 |
| Zsp2I | ATGCAT | 1 cut(s) | 256 |