TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 18 - 198 | 5.6e-56 | TIR domain |
| TIR_2 | PF13676 | 21 - 128 | 5.4e-15 | TIR domain |
| NB-ARC | PF00931 | 201 - 371 | 5.9e-23 | NB-ARC domain |
| NACHT | PF05729 | 222 - 363 | 3.3e-07 | NACHT domain |
| WHD_ROQ1 | PF23282 | 438 - 507 | 5.4e-12 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 650 - 753 | 1.9e-06 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 698 - 849 | 5.6e-08 | Disease resistance protein RPS4B-like, leucine-rich repeats |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2270 |
| AccI | GTMKAC | 2 cut(s) | 1389, 2068 |
| AciI | CCGC | 3 cut(s) | 32, 899, 1351 |
| AclWI | GGATC | 4 cut(s) | 338, 351, 933, 2323 |
| AcoI | YGGCCR | 1 cut(s) | 462 |
| AcsI | RAATTY | 7 cut(s) | 1188, 1231, 1326, 1754, 2031, 2038, 2144 |
| AcuI | CTGAAG | 2 cut(s) | 402, 1307 |
| AdeI | CACNNNGTG | 2 cut(s) | 267, 952 |
| AfaI | GTAC | 4 cut(s) | 1017, 1208, 1361, 1981 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 2472, 2475 |
| AflII | CTTAAG | 2 cut(s) | 1688, 2297 |
| AflIII | ACRYGT | 1 cut(s) | 60 |
| AhlI | ACTAGT | 3 cut(s) | 706, 1018, 1384 |
| AjiI | CACGTC | 1 cut(s) | 61 |
| AjnI | CCWGG | 3 cut(s) | 1467, 1534, 1861 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 238, 270, 393, 425, 1223, 1255 |
| AleI | CACNNNNGTG | 1 cut(s) | 2229 |
| Alw21I | GWGCWC | 1 cut(s) | 2226 |
| Alw26I | GTCTC | 2 cut(s) | 352, 2017 |
| AlwI | GGATC | 4 cut(s) | 338, 351, 933, 2323 |
| AoxI | GGCC | 3 cut(s) | 462, 1726, 1859 |
| ApeKI | GCWGC | 3 cut(s) | 372, 1693, 2118 |
| ApoI | RAATTY | 7 cut(s) | 1188, 1231, 1326, 1754, 2031, 2038, 2144 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2016, 2048 |
| Asp700I | GAANNNNTTC | 6 cut(s) | 98, 387, 837, 1077, 1512, 2384 |
| AspLEI | GCGC | 1 cut(s) | 14 |
| AspS9I | GGNCC | 3 cut(s) | 1197, 1727, 1926 |
| AsuC2I | CCSGG | 2 cut(s) | 152, 1119 |
| AsuHPI | GGTGA | 3 cut(s) | 92, 1844, 2342 |
| AvaII | GGWCC | 2 cut(s) | 1197, 1926 |
| AxyI | CCTNAGG | 1 cut(s) | 2470 |
| BalI | TGGCCA | 1 cut(s) | 464 |
| BamHI | GGATCC | 1 cut(s) | 343 |
| BanII | GRGCYC | 1 cut(s) | 1119 |
| BbsI | GAAGAC | 3 cut(s) | 90, 1163, 1550 |
| Bbv12I | GWGCWC | 1 cut(s) | 2226 |
| BbvI | GCAGC | 3 cut(s) | 384, 1680, 2105 |
| BccI | CCATC | 8 cut(s) | 191, 471, 667, 1295, 1309, 1901, 2011, 2180 |
| BciT130I | CCWGG | 3 cut(s) | 1469, 1536, 1863 |
| BciVI | GTATCC | 2 cut(s) | 592, 1785 |
| BclI | TGATCA | 1 cut(s) | 1849 |
| BcnI | CCSGG | 2 cut(s) | 152, 1119 |
| BcoDI | GTCTC | 2 cut(s) | 352, 2017 |
| BcuI | ACTAGT | 3 cut(s) | 706, 1018, 1384 |
| BfaI | CTAG | 8 cut(s) | 555, 702, 707, 788, 908, 1002, 1019, 1385 |
| BfmI | CTRYAG | 1 cut(s) | 2050 |
| BfoI | RGCGCY | 1 cut(s) | 15 |
| BfrI | CTTAAG | 2 cut(s) | 1688, 2297 |
| BfuI | GTATCC | 2 cut(s) | 592, 1785 |
| BisI | GCNGC | 3 cut(s) | 373, 1694, 2119 |
| BlsI | GCNGC | 3 cut(s) | 374, 1695, 2120 |
| Bme1390I | CCNGG | 5 cut(s) | 152, 1119, 1469, 1536, 1863 |
| Bme18I | GGWCC | 2 cut(s) | 1197, 1926 |
| BmgBI | CACGTC | 1 cut(s) | 61 |
| BmgT120I | GGNCC | 3 cut(s) | 1197, 1727, 1926 |
| BmiI | GGNNCC | 3 cut(s) | 345, 1198, 1928 |
| BmrFI | CCNGG | 5 cut(s) | 152, 1119, 1469, 1536, 1863 |
| BmsI | GCATC | 4 cut(s) | 436, 559, 753, 1213 |
| BpiI | GAAGAC | 3 cut(s) | 90, 1163, 1550 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 707, 739, 1705, 1737 |
| BpmI | CTGGAG | 4 cut(s) | 174, 629, 1185, 1786 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1177 |
| BpuEI | CTTGAG | 4 cut(s) | 1897, 1976, 2003, 2248 |
| BpuMI | CCSGG | 2 cut(s) | 152, 1119 |
| Bsa29I | ATCGAT | 1 cut(s) | 1896 |
| BsaBI | GATNNNNATC | 2 cut(s) | 924, 1656 |
| BsaJI | CCNNGG | 1 cut(s) | 76 |
| BsaWI | WCCGGW | 1 cut(s) | 2592 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 2472, 2475 |
| Bse1I | ACTGG | 3 cut(s) | 945, 971, 1769 |
| Bse21I | CCTNAGG | 1 cut(s) | 2470 |
| Bse3DI | GCAATG | 3 cut(s) | 1338, 1402, 1570 |
| Bse8I | GATNNNNATC | 2 cut(s) | 924, 1656 |
| BseBI | CCWGG | 3 cut(s) | 1469, 1536, 1863 |
| BseCI | ATCGAT | 1 cut(s) | 1896 |
| BseDI | CCNNGG | 1 cut(s) | 76 |
| BseGI | GGATG | 7 cut(s) | 482, 550, 678, 856, 1508, 1999, 2003 |
| BseJI | GATNNNNATC | 2 cut(s) | 924, 1656 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 2472, 2475 |
| BseMI | GCAATG | 3 cut(s) | 1338, 1402, 1570 |
| BseMII | CTCAG | 2 cut(s) | 1425, 2500 |
| BseNI | ACTGG | 3 cut(s) | 945, 971, 1769 |
| BseRI | GAGGAG | 1 cut(s) | 320 |
| BseXI | GCAGC | 3 cut(s) | 384, 1680, 2105 |
| BsgI | GTGCAG | 1 cut(s) | 1745 |
| Bsh1285I | CGRYCG | 1 cut(s) | 231 |
| BshFI | GGCC | 3 cut(s) | 464, 1728, 1861 |
| BshVI | ATCGAT | 1 cut(s) | 1896 |
| BsiEI | CGRYCG | 1 cut(s) | 231 |
| BsiHKAI | GWGCWC | 1 cut(s) | 2226 |
| BsiSI | CCGG | 3 cut(s) | 151, 1119, 2593 |
| BslFI | GGGAC | 3 cut(s) | 167, 328, 2203 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 2472, 2475 |
| BsmAI | GTCTC | 2 cut(s) | 352, 2017 |
| BsmFI | GGGAC | 3 cut(s) | 167, 328, 2203 |
| BsmI | GAATGC | 2 cut(s) | 302, 2520 |
| BsnI | GGCC | 3 cut(s) | 464, 1728, 1861 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1119, 2226 |
| Bsp1407I | TGTACA | 1 cut(s) | 1206 |
| Bsp143I | GATC | 7 cut(s) | 228, 343, 925, 1006, 1849, 1897, 2315 |
| BspACI | CCGC | 3 cut(s) | 32, 899, 1351 |
| BspANI | GGCC | 3 cut(s) | 464, 1728, 1861 |
| BspCNI | CTCAG | 2 cut(s) | 1426, 2499 |
| BspDI | ATCGAT | 1 cut(s) | 1896 |
| BspLI | GGNNCC | 3 cut(s) | 345, 1198, 1928 |
| BspMAI | CTGCAG | 1 cut(s) | 2054 |
| BspPI | GGATC | 4 cut(s) | 338, 351, 933, 2323 |
| BspQI | GCTCTTC | 2 cut(s) | 1083, 1524 |
| BspTI | CTTAAG | 2 cut(s) | 1688, 2297 |
| BsrDI | GCAATG | 3 cut(s) | 1338, 1402, 1570 |
| BsrGI | TGTACA | 1 cut(s) | 1206 |
| BsrI | ACTGG | 3 cut(s) | 945, 971, 1769 |
| BssECI | CCNNGG | 1 cut(s) | 76 |
| BssMI | GATC | 7 cut(s) | 228, 343, 925, 1006, 1849, 1897, 2315 |
| BssNAI | GTATAC | 1 cut(s) | 1390 |
| Bst1107I | GTATAC | 1 cut(s) | 1390 |
| Bst2UI | CCWGG | 3 cut(s) | 1469, 1536, 1863 |
| Bst4CI | ACNGT | 9 cut(s) | 129, 282, 537, 565, 1140, 1394, 1412, 2420, 2545 |
| Bst6I | CTCTTC | 5 cut(s) | 396, 1083, 1524, 1638, 2395 |
| BstAFI | CTTAAG | 2 cut(s) | 1688, 2297 |
| BstAUI | TGTACA | 1 cut(s) | 1206 |
| BstC8I | GCNNGC | 4 cut(s) | 272, 531, 1355, 2518 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2473 |
| BstF5I | GGATG | 7 cut(s) | 482, 550, 678, 856, 1508, 1999, 2003 |
| BstH2I | RGCGCY | 1 cut(s) | 15 |
| BstHHI | GCGC | 1 cut(s) | 14 |
| BstKTI | GATC | 7 cut(s) | 231, 346, 928, 1009, 1852, 1900, 2318 |
| BstMAI | GTCTC | 2 cut(s) | 352, 2017 |
| BstMBI | GATC | 7 cut(s) | 228, 343, 925, 1006, 1849, 1897, 2315 |
| BstMCI | CGRYCG | 1 cut(s) | 231 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 11, 38, 2536 |
| BstNI | CCWGG | 3 cut(s) | 1469, 1536, 1863 |
| BstNSI | RCATGY | 1 cut(s) | 1016 |
| BstSCI | CCNGG | 5 cut(s) | 150, 1117, 1467, 1534, 1861 |
| BstSFI | CTRYAG | 1 cut(s) | 2050 |
| BstV1I | GCAGC | 3 cut(s) | 384, 1680, 2105 |
| BstV2I | GAAGAC | 3 cut(s) | 90, 1163, 1550 |
| BstX2I | RGATCY | 1 cut(s) | 343 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1227 |
| BstYI | RGATCY | 1 cut(s) | 343 |
| BstZ17I | GTATAC | 1 cut(s) | 1390 |
| Bsu15I | ATCGAT | 1 cut(s) | 1896 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2470 |
| BsuI | GTATCC | 2 cut(s) | 592, 1785 |
| BsuRI | GGCC | 3 cut(s) | 464, 1728, 1861 |
| BsuTUI | ATCGAT | 1 cut(s) | 1896 |
| BtrI | CACGTC | 1 cut(s) | 61 |
| BtsCI | GGATG | 7 cut(s) | 482, 550, 678, 856, 1508, 1999, 2003 |
| BtsIMutI | CAGTG | 3 cut(s) | 134, 533, 1762 |
| Cac8I | GCNNGC | 4 cut(s) | 272, 531, 1355, 2518 |
| CfoI | GCGC | 1 cut(s) | 14 |
| Cfr13I | GGNCC | 3 cut(s) | 1197, 1727, 1926 |
| ClaI | ATCGAT | 1 cut(s) | 1896 |
| CseI | GACGC | 1 cut(s) | 1551 |
| CsiI | ACCWGGT | 1 cut(s) | 1467 |
| Csp6I | GTAC | 4 cut(s) | 1016, 1207, 1360, 1980 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 518, 553 |
| CviQI | GTAC | 4 cut(s) | 1016, 1207, 1360, 1980 |
| DpnI | GATC | 7 cut(s) | 230, 345, 927, 1008, 1851, 1899, 2317 |
| DpnII | GATC | 7 cut(s) | 228, 343, 925, 1006, 1849, 1897, 2315 |
| DraIII | CACNNNGTG | 2 cut(s) | 267, 952 |
| EaeI | YGGCCR | 1 cut(s) | 462 |
| Eam1104I | CTCTTC | 5 cut(s) | 396, 1083, 1524, 1638, 2395 |
| EarI | CTCTTC | 5 cut(s) | 396, 1083, 1524, 1638, 2395 |
| Eco24I | GRGCYC | 1 cut(s) | 1119 |
| Eco47I | GGWCC | 2 cut(s) | 1197, 1926 |
| Eco57I | CTGAAG | 2 cut(s) | 402, 1307 |
| Eco81I | CCTNAGG | 1 cut(s) | 2470 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2473 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1197, 1926 |
| EcoRI | GAATTC | 1 cut(s) | 1231 |
| EcoRII | CCWGG | 3 cut(s) | 1467, 1534, 1861 |
| EcoT22I | ATGCAT | 2 cut(s) | 302, 1228 |
| EcoT38I | GRGCYC | 1 cut(s) | 1119 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 888, 920, 2424, 2456 |
| FaqI | GGGAC | 3 cut(s) | 167, 328, 2203 |
| FauI | CCCGC | 1 cut(s) | 25 |
| FauNDI | CATATG | 1 cut(s) | 1045 |
| FbaI | TGATCA | 1 cut(s) | 1849 |
| FblI | GTMKAC | 2 cut(s) | 1389, 2068 |
| Fnu4HI | GCNGC | 3 cut(s) | 373, 1694, 2119 |
| FokI | GGATG | 7 cut(s) | 489, 537, 685, 863, 1515, 1986, 1990 |
| FriOI | GRGCYC | 1 cut(s) | 1119 |
| Fsp4HI | GCNGC | 3 cut(s) | 373, 1694, 2119 |
| FspBI | CTAG | 8 cut(s) | 555, 702, 707, 788, 908, 1002, 1019, 1385 |
| GlaI | GCGC | 1 cut(s) | 13 |
| GluI | GCNGC | 3 cut(s) | 373, 1694, 2119 |
| GsuI | CTGGAG | 4 cut(s) | 174, 629, 1185, 1786 |
| HaeII | RGCGCY | 1 cut(s) | 15 |
| HaeIII | GGCC | 3 cut(s) | 464, 1728, 1861 |
| HapII | CCGG | 3 cut(s) | 151, 1119, 2593 |
| HgaI | GACGC | 1 cut(s) | 1551 |
| HhaI | GCGC | 1 cut(s) | 14 |
| Hin6I | GCGC | 1 cut(s) | 12 |
| HinP1I | GCGC | 1 cut(s) | 12 |
| HindIII | AAGCTT | 2 cut(s) | 1125, 2537 |
| HpaII | CCGG | 3 cut(s) | 151, 1119, 2593 |
| HphI | GGTGA | 3 cut(s) | 92, 1844, 2342 |
| Hpy166II | GTNNAC | 5 cut(s) | 1390, 1541, 1685, 1832, 2069 |
| Hpy188I | TCNGA | 7 cut(s) | 77, 518, 580, 764, 1399, 1462, 2489 |
| Hpy8I | GTNNAC | 5 cut(s) | 1390, 1541, 1685, 1832, 2069 |
| Hpy99I | CGWCG | 1 cut(s) | 62 |
| HpyCH4III | ACNGT | 9 cut(s) | 129, 282, 537, 565, 1140, 1394, 1412, 2420, 2545 |
| HpyCH4IV | ACGT | 1 cut(s) | 60 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 11, 38, 2536 |
| HpySE526I | ACGT | 1 cut(s) | 60 |
| HspAI | GCGC | 1 cut(s) | 12 |
| Ksp22I | TGATCA | 1 cut(s) | 1849 |
| Kzo9I | GATC | 7 cut(s) | 228, 343, 925, 1006, 1849, 1897, 2315 |
| LguI | GCTCTTC | 2 cut(s) | 1083, 1524 |
| LmnI | GCTCC | 2 cut(s) | 540, 2245 |
| Lsp1109I | GCAGC | 3 cut(s) | 384, 1680, 2105 |
| LweI | GCATC | 4 cut(s) | 436, 559, 753, 1213 |
| MabI | ACCWGGT | 1 cut(s) | 1467 |
| MaeI | CTAG | 8 cut(s) | 555, 702, 707, 788, 908, 1002, 1019, 1385 |
| MaeII | ACGT | 1 cut(s) | 60 |
| MaeIII | GTNAC | 5 cut(s) | 123, 559, 1021, 1623, 1904 |
| MalI | GATC | 7 cut(s) | 230, 345, 927, 1008, 1851, 1899, 2317 |
| MboI | GATC | 7 cut(s) | 228, 343, 925, 1006, 1849, 1897, 2315 |
| MfeI | CAATTG | 3 cut(s) | 207, 2217, 2578 |
| MflI | RGATCY | 1 cut(s) | 343 |
| MhlI | GDGCHC | 2 cut(s) | 1119, 2226 |
| MlsI | TGGCCA | 1 cut(s) | 464 |
| MluNI | TGGCCA | 1 cut(s) | 464 |
| MlyI | GAGTC | 3 cut(s) | 2019, 2074, 2353 |
| MmeI | TCCRAC | 4 cut(s) | 571, 1073, 1276, 2460 |
| Mox20I | TGGCCA | 1 cut(s) | 464 |
| Mph1103I | ATGCAT | 2 cut(s) | 302, 1228 |
| MroXI | GAANNNNTTC | 6 cut(s) | 98, 387, 837, 1077, 1512, 2384 |
| MscI | TGGCCA | 1 cut(s) | 464 |
| MslI | CAYNNNNRTG | 2 cut(s) | 555, 2229 |
| Msp20I | TGGCCA | 1 cut(s) | 464 |
| MspCI | CTTAAG | 2 cut(s) | 1688, 2297 |
| MspI | CCGG | 3 cut(s) | 151, 1119, 2593 |
| MspR9I | CCNGG | 5 cut(s) | 152, 1119, 1469, 1536, 1863 |
| MunI | CAATTG | 3 cut(s) | 207, 2217, 2578 |
| Mva1269I | GAATGC | 2 cut(s) | 302, 2520 |
| MvaI | CCWGG | 3 cut(s) | 1469, 1536, 1863 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 11, 38, 2536 |
| NciI | CCSGG | 2 cut(s) | 152, 1119 |
| NdeI | CATATG | 1 cut(s) | 1045 |
| NdeII | GATC | 7 cut(s) | 228, 343, 925, 1006, 1849, 1897, 2315 |
| NlaIV | GGNNCC | 3 cut(s) | 345, 1198, 1928 |
| NmuCI | GTSAC | 2 cut(s) | 559, 1021 |
| NsiI | ATGCAT | 2 cut(s) | 302, 1228 |
| NspI | RCATGY | 1 cut(s) | 1016 |
| OliI | CACNNNNGTG | 1 cut(s) | 2229 |
| PciSI | GCTCTTC | 2 cut(s) | 1083, 1524 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 224 |
| PctI | GAATGC | 2 cut(s) | 302, 2520 |
| PdmI | GAANNNNTTC | 6 cut(s) | 98, 387, 837, 1077, 1512, 2384 |
| PflFI | GACNNNGTC | 1 cut(s) | 1545 |
| PfoI | TCCNGGA | 1 cut(s) | 150 |
| PkrI | GCNGC | 3 cut(s) | 374, 1695, 2120 |
| Ple19I | CGATCG | 1 cut(s) | 231 |
| PleI | GAGTC | 3 cut(s) | 2019, 2073, 2352 |
| PpsI | GAGTC | 3 cut(s) | 2019, 2073, 2352 |
| PpuMI | RGGWCCY | 2 cut(s) | 1197, 1926 |
| PsiI | TTATAA | 1 cut(s) | 2270 |
| Psp5II | RGGWCCY | 2 cut(s) | 1197, 1926 |
| Psp6I | CCWGG | 3 cut(s) | 1467, 1534, 1861 |
| PspGI | CCWGG | 3 cut(s) | 1467, 1534, 1861 |
| PspN4I | GGNNCC | 3 cut(s) | 345, 1198, 1928 |
| PspPI | GGNCC | 3 cut(s) | 1197, 1727, 1926 |
| PspPPI | RGGWCCY | 2 cut(s) | 1197, 1926 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1815, 1847 |
| PstI | CTGCAG | 1 cut(s) | 2054 |
| PsuI | RGATCY | 1 cut(s) | 343 |
| PsyI | GACNNNGTC | 1 cut(s) | 1545 |
| PvuI | CGATCG | 1 cut(s) | 231 |
| RsaI | GTAC | 4 cut(s) | 1017, 1208, 1361, 1981 |
| RsaNI | GTAC | 4 cut(s) | 1016, 1207, 1360, 1980 |
| RseI | CAYNNNNRTG | 2 cut(s) | 555, 2229 |
| SapI | GCTCTTC | 2 cut(s) | 1083, 1524 |
| SatI | GCNGC | 3 cut(s) | 373, 1694, 2119 |
| Sau3AI | GATC | 7 cut(s) | 228, 343, 925, 1006, 1849, 1897, 2315 |
| Sau96I | GGNCC | 3 cut(s) | 1197, 1727, 1926 |
| SchI | GAGTC | 3 cut(s) | 2019, 2074, 2353 |
| ScrFI | CCNGG | 5 cut(s) | 152, 1119, 1469, 1536, 1863 |
| SduI | GDGCHC | 2 cut(s) | 1119, 2226 |
| SexAI | ACCWGGT | 1 cut(s) | 1467 |
| SfaNI | GCATC | 4 cut(s) | 436, 559, 753, 1213 |
| SfcI | CTRYAG | 1 cut(s) | 2050 |
| SinI | GGWCC | 2 cut(s) | 1197, 1926 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 555, 2229 |
| SmlI | CTYRAG | 6 cut(s) | 1688, 1876, 1955, 2018, 2227, 2297 |
| SmoI | CTYRAG | 6 cut(s) | 1688, 1876, 1955, 2018, 2227, 2297 |
| SpeI | ACTAGT | 3 cut(s) | 706, 1018, 1384 |
| SsiI | CCGC | 3 cut(s) | 32, 899, 1351 |
| SspI | AATATT | 1 cut(s) | 1846 |
| SspMI | CTAG | 8 cut(s) | 555, 702, 707, 788, 908, 1002, 1019, 1385 |
| StyD4I | CCNGG | 5 cut(s) | 150, 1117, 1467, 1534, 1861 |
| TaaI | ACNGT | 9 cut(s) | 129, 282, 537, 565, 1140, 1394, 1412, 2420, 2545 |
| TaiI | ACGT | 1 cut(s) | 63 |
| TaqI | TCGA | 2 cut(s) | 218, 1896 |
| TatI | WGTACW | 3 cut(s) | 1015, 1206, 1359 |
| TscAI | CASTG | 3 cut(s) | 134, 540, 1769 |
| TseFI | GTSAC | 2 cut(s) | 559, 1021 |
| TseI | GCWGC | 3 cut(s) | 372, 1693, 2118 |
| Tsp45I | GTSAC | 2 cut(s) | 559, 1021 |
| TspGWI | ACGGA | 1 cut(s) | 106 |
| TspRI | CASTG | 3 cut(s) | 134, 540, 1769 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1545 |
| Vha464I | CTTAAG | 2 cut(s) | 1688, 2297 |
| VpaK11BI | GGWCC | 2 cut(s) | 1197, 1926 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2473 |
| XapI | RAATTY | 7 cut(s) | 1188, 1231, 1326, 1754, 2031, 2038, 2144 |
| XceI | RCATGY | 1 cut(s) | 1016 |
| XmiI | GTMKAC | 2 cut(s) | 1389, 2068 |
| XmnI | GAANNNNTTC | 6 cut(s) | 98, 387, 837, 1077, 1512, 2384 |
| XspI | CTAG | 8 cut(s) | 555, 702, 707, 788, 908, 1002, 1019, 1385 |
| Zsp2I | ATGCAT | 2 cut(s) | 302, 1228 |