TMV resistance protein N-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 2530 |
| AccI | GTMKAC | 2 cut(s) | 202, 883 |
| AciI | CCGC | 1 cut(s) | 305 |
| AclI | AACGTT | 1 cut(s) | 1511 |
| AclWI | GGATC | 1 cut(s) | 339 |
| AcsI | RAATTY | 6 cut(s) | 126, 213, 1393, 1553, 1875, 2196 |
| AcuI | CTGAAG | 4 cut(s) | 470, 493, 1118, 1621 |
| AfaI | GTAC | 7 cut(s) | 423, 921, 1390, 1745, 2068, 2316, 2669 |
| AfeI | AGCGCT | 1 cut(s) | 1634 |
| AflII | CTTAAG | 1 cut(s) | 1706 |
| AflIII | ACRYGT | 2 cut(s) | 418, 749 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2329 |
| AhlI | ACTAGT | 1 cut(s) | 424 |
| AjnI | CCWGG | 3 cut(s) | 943, 1989, 2185 |
| Alw21I | GWGCWC | 3 cut(s) | 546, 2308, 2629 |
| Alw26I | GTCTC | 4 cut(s) | 1426, 1481, 2223, 2693 |
| Alw44I | GTGCAC | 1 cut(s) | 2625 |
| AlwI | GGATC | 1 cut(s) | 339 |
| Ama87I | CYCGRG | 2 cut(s) | 2519, 2565 |
| Aor51HI | AGCGCT | 1 cut(s) | 1634 |
| AoxI | GGCC | 2 cut(s) | 1135, 2619 |
| ApaI | GGGCCC | 1 cut(s) | 2623 |
| ApaLI | GTGCAC | 1 cut(s) | 2625 |
| ApeKI | GCWGC | 4 cut(s) | 1102, 1527, 1687, 2682 |
| ApoI | RAATTY | 6 cut(s) | 126, 213, 1393, 1553, 1875, 2196 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2030, 2062 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 243, 506, 2349 |
| AspLEI | GCGC | 1 cut(s) | 1635 |
| AspS9I | GGNCC | 5 cut(s) | 1136, 1335, 2055, 2619, 2620 |
| AsuHPI | GGTGA | 6 cut(s) | 421, 1253, 2005, 2085, 2459, 2617 |
| AvaI | CYCGRG | 2 cut(s) | 2519, 2565 |
| AvaII | GGWCC | 2 cut(s) | 1335, 2055 |
| BaeGI | GKGCMC | 2 cut(s) | 2623, 2629 |
| BanII | GRGCYC | 3 cut(s) | 546, 969, 2623 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1091, 1123 |
| BbsI | GAAGAC | 2 cut(s) | 569, 1818 |
| Bbv12I | GWGCWC | 3 cut(s) | 546, 2308, 2629 |
| BbvI | GCAGC | 4 cut(s) | 1089, 1514, 1674, 2694 |
| BccI | CCATC | 7 cut(s) | 73, 260, 454, 701, 715, 1420, 2394 |
| BcgI | CGANNNNNNTGC | 1 cut(s) | 2718 |
| BciT130I | CCWGG | 3 cut(s) | 945, 1991, 2187 |
| BciVI | GTATCC | 1 cut(s) | 1194 |
| BclI | TGATCA | 1 cut(s) | 1258 |
| BcoDI | GTCTC | 4 cut(s) | 1426, 1481, 2223, 2693 |
| BcuI | ACTAGT | 1 cut(s) | 424 |
| BfaI | CTAG | 7 cut(s) | 108, 194, 276, 314, 347, 425, 740 |
| BfmI | CTRYAG | 2 cut(s) | 203, 2571 |
| BfoI | RGCGCY | 1 cut(s) | 1636 |
| BfrI | CTTAAG | 1 cut(s) | 1706 |
| BfuAI | ACCTGC | 1 cut(s) | 2530 |
| BfuI | GTATCC | 1 cut(s) | 1194 |
| BisI | GCNGC | 4 cut(s) | 1103, 1528, 1688, 2683 |
| BlsI | GCNGC | 4 cut(s) | 1104, 1529, 1689, 2684 |
| Bme1390I | CCNGG | 3 cut(s) | 945, 1991, 2187 |
| Bme18I | GGWCC | 2 cut(s) | 1335, 2055 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2329 |
| BmeT110I | CYCGRG | 2 cut(s) | 2519, 2565 |
| BmgT120I | GGNCC | 5 cut(s) | 1136, 1335, 2055, 2619, 2620 |
| BmiI | GGNNCC | 4 cut(s) | 1138, 1337, 2620, 2621 |
| BmrFI | CCNGG | 3 cut(s) | 945, 1991, 2187 |
| BmrI | ACTGGG | 1 cut(s) | 2298 |
| BmsI | GCATC | 3 cut(s) | 159, 619, 2585 |
| BmuI | ACTGGG | 1 cut(s) | 2298 |
| BoxI | GACNNNNGTC | 1 cut(s) | 928 |
| BpiI | GAAGAC | 2 cut(s) | 569, 1818 |
| Bpu10I | CCTNAGC | 1 cut(s) | 583 |
| BpuEI | CTTGAG | 6 cut(s) | 1180, 1385, 1412, 1516, 2162, 2304 |
| Bsa29I | ATCGAT | 1 cut(s) | 1305 |
| BsaBI | GATNNNNATC | 2 cut(s) | 330, 1065 |
| BsaJI | CCNNGG | 2 cut(s) | 433, 2520 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2220, 2250 |
| Bse1I | ACTGG | 3 cut(s) | 377, 2123, 2293 |
| Bse3DI | GCAATG | 2 cut(s) | 1416, 1748 |
| Bse8I | GATNNNNATC | 2 cut(s) | 330, 1065 |
| BseBI | CCWGG | 3 cut(s) | 945, 1991, 2187 |
| BseCI | ATCGAT | 1 cut(s) | 1305 |
| BseDI | CCNNGG | 2 cut(s) | 433, 2520 |
| BseGI | GGATG | 7 cut(s) | 10, 84, 262, 914, 1225, 1408, 1412 |
| BseJI | GATNNNNATC | 2 cut(s) | 330, 1065 |
| BseMI | GCAATG | 2 cut(s) | 1416, 1748 |
| BseMII | CTCAG | 5 cut(s) | 540, 1838, 1876, 2193, 2232 |
| BseNI | ACTGG | 3 cut(s) | 377, 2123, 2293 |
| BseRI | GAGGAG | 1 cut(s) | 1667 |
| BseSI | GKGCMC | 2 cut(s) | 2623, 2629 |
| BseXI | GCAGC | 4 cut(s) | 1089, 1514, 1674, 2694 |
| BsgI | GTGCAG | 1 cut(s) | 1215 |
| BshFI | GGCC | 2 cut(s) | 1137, 2621 |
| BshVI | ATCGAT | 1 cut(s) | 1305 |
| BsiHKAI | GWGCWC | 3 cut(s) | 546, 2308, 2629 |
| BsiHKCI | CYCGRG | 2 cut(s) | 2519, 2565 |
| BsiSI | CCGG | 2 cut(s) | 524, 1217 |
| BslFI | GGGAC | 2 cut(s) | 1612, 2502 |
| BsmAI | GTCTC | 4 cut(s) | 1426, 1481, 2223, 2693 |
| BsmFI | GGGAC | 2 cut(s) | 1612, 2502 |
| BsmI | GAATGC | 2 cut(s) | 508, 1956 |
| BsnI | GGCC | 2 cut(s) | 1137, 2621 |
| BsoBI | CYCGRG | 2 cut(s) | 2519, 2565 |
| Bsp120I | GGGCCC | 1 cut(s) | 2619 |
| Bsp1286I | GDGCHC | 5 cut(s) | 546, 969, 2308, 2623, 2629 |
| Bsp143I | GATC | 5 cut(s) | 331, 1258, 1306, 1736, 2464 |
| Bsp19I | CCATGG | 1 cut(s) | 433 |
| BspACI | CCGC | 1 cut(s) | 305 |
| BspANI | GGCC | 2 cut(s) | 1137, 2621 |
| BspCNI | CTCAG | 5 cut(s) | 541, 1839, 1875, 2194, 2233 |
| BspDI | ATCGAT | 1 cut(s) | 1305 |
| BspHI | TCATGA | 1 cut(s) | 2374 |
| BspLI | GGNNCC | 4 cut(s) | 1138, 1337, 2620, 2621 |
| BspMI | ACCTGC | 1 cut(s) | 2530 |
| BspPI | GGATC | 1 cut(s) | 339 |
| BspQI | GCTCTTC | 3 cut(s) | 489, 933, 2643 |
| BspTI | CTTAAG | 1 cut(s) | 1706 |
| BsrDI | GCAATG | 2 cut(s) | 1416, 1748 |
| BsrI | ACTGG | 3 cut(s) | 377, 2123, 2293 |
| BssECI | CCNNGG | 2 cut(s) | 433, 2520 |
| BssMI | GATC | 5 cut(s) | 331, 1258, 1306, 1736, 2464 |
| BssNAI | GTATAC | 1 cut(s) | 884 |
| BssT1I | CCWWGG | 1 cut(s) | 433 |
| Bst1107I | GTATAC | 1 cut(s) | 884 |
| Bst2UI | CCWGG | 3 cut(s) | 945, 1991, 2187 |
| Bst4CI | ACNGT | 6 cut(s) | 679, 800, 1856, 2349, 2372, 2516 |
| Bst6I | CTCTTC | 5 cut(s) | 489, 763, 933, 1047, 2643 |
| BstAFI | CTTAAG | 1 cut(s) | 1706 |
| BstC8I | GCNNGC | 1 cut(s) | 1954 |
| BstDSI | CCRYGG | 1 cut(s) | 433 |
| BstF5I | GGATG | 7 cut(s) | 10, 84, 262, 914, 1225, 1408, 1412 |
| BstH2I | RGCGCY | 1 cut(s) | 1636 |
| BstHHI | GCGC | 1 cut(s) | 1635 |
| BstKTI | GATC | 5 cut(s) | 334, 1261, 1309, 1739, 2467 |
| BstMAI | GTCTC | 4 cut(s) | 1426, 1481, 2223, 2693 |
| BstMBI | GATC | 5 cut(s) | 331, 1258, 1306, 1736, 2464 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 1972, 2026, 2303 |
| BstNI | CCWGG | 3 cut(s) | 945, 1991, 2187 |
| BstNSI | RCATGY | 4 cut(s) | 422, 753, 2265, 2532 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 928 |
| BstSCI | CCNGG | 3 cut(s) | 943, 1989, 2185 |
| BstSFI | CTRYAG | 2 cut(s) | 203, 2571 |
| BstSLI | GKGCMC | 2 cut(s) | 2623, 2629 |
| BstV1I | GCAGC | 4 cut(s) | 1089, 1514, 1674, 2694 |
| BstV2I | GAAGAC | 2 cut(s) | 569, 1818 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 633, 1740 |
| BstZ17I | GTATAC | 1 cut(s) | 884 |
| Bsu15I | ATCGAT | 1 cut(s) | 1305 |
| BsuI | GTATCC | 1 cut(s) | 1194 |
| BsuRI | GGCC | 2 cut(s) | 1137, 2621 |
| BsuTUI | ATCGAT | 1 cut(s) | 1305 |
| BtgI | CCRYGG | 1 cut(s) | 433 |
| BtsCI | GGATG | 7 cut(s) | 10, 84, 262, 914, 1225, 1408, 1412 |
| BtsIMutI | CAGTG | 3 cut(s) | 1645, 1870, 2130 |
| BveI | ACCTGC | 1 cut(s) | 2530 |
| Cac8I | GCNNGC | 1 cut(s) | 1954 |
| CciI | TCATGA | 1 cut(s) | 2374 |
| CfoI | GCGC | 1 cut(s) | 1635 |
| Cfr13I | GGNCC | 5 cut(s) | 1136, 1335, 2055, 2619, 2620 |
| ClaI | ATCGAT | 1 cut(s) | 1305 |
| CseI | GACGC | 1 cut(s) | 960 |
| Csp6I | GTAC | 7 cut(s) | 422, 920, 1389, 1744, 2067, 2315, 2668 |
| CviQI | GTAC | 7 cut(s) | 422, 920, 1389, 1744, 2067, 2315, 2668 |
| DpnI | GATC | 5 cut(s) | 333, 1260, 1308, 1738, 2466 |
| DpnII | GATC | 5 cut(s) | 331, 1258, 1306, 1736, 2464 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2329 |
| Eam1104I | CTCTTC | 5 cut(s) | 489, 763, 933, 1047, 2643 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2329 |
| EarI | CTCTTC | 5 cut(s) | 489, 763, 933, 1047, 2643 |
| Ecl136II | GAGCTC | 1 cut(s) | 544 |
| Eco130I | CCWWGG | 1 cut(s) | 433 |
| Eco24I | GRGCYC | 3 cut(s) | 546, 969, 2623 |
| Eco47I | GGWCC | 2 cut(s) | 1335, 2055 |
| Eco47III | AGCGCT | 1 cut(s) | 1634 |
| Eco53kI | GAGCTC | 1 cut(s) | 544 |
| Eco57I | CTGAAG | 4 cut(s) | 470, 493, 1118, 1621 |
| Eco88I | CYCGRG | 2 cut(s) | 2519, 2565 |
| EcoICRI | GAGCTC | 1 cut(s) | 544 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1335, 2619 |
| EcoRII | CCWGG | 3 cut(s) | 943, 1989, 2185 |
| EcoT14I | CCWWGG | 1 cut(s) | 433 |
| EcoT22I | ATGCAT | 3 cut(s) | 634, 2263, 2600 |
| EcoT38I | GRGCYC | 3 cut(s) | 546, 969, 2623 |
| ErhI | CCWWGG | 1 cut(s) | 433 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 294, 326 |
| FaqI | GGGAC | 2 cut(s) | 1612, 2502 |
| FauNDI | CATATG | 2 cut(s) | 451, 2731 |
| FbaI | TGATCA | 1 cut(s) | 1258 |
| FblI | GTMKAC | 2 cut(s) | 202, 883 |
| Fnu4HI | GCNGC | 4 cut(s) | 1103, 1528, 1688, 2683 |
| FokI | GGATG | 7 cut(s) | 17, 91, 269, 921, 1232, 1395, 1399 |
| FriOI | GRGCYC | 3 cut(s) | 546, 969, 2623 |
| Fsp4HI | GCNGC | 4 cut(s) | 1103, 1528, 1688, 2683 |
| FspBI | CTAG | 7 cut(s) | 108, 194, 276, 314, 347, 425, 740 |
| GlaI | GCGC | 1 cut(s) | 1634 |
| GluI | GCNGC | 4 cut(s) | 1103, 1528, 1688, 2683 |
| HaeII | RGCGCY | 1 cut(s) | 1636 |
| HaeIII | GGCC | 2 cut(s) | 1137, 2621 |
| HapII | CCGG | 2 cut(s) | 524, 1217 |
| HgaI | GACGC | 1 cut(s) | 960 |
| HhaI | GCGC | 1 cut(s) | 1635 |
| Hin6I | GCGC | 1 cut(s) | 1633 |
| HinP1I | GCGC | 1 cut(s) | 1633 |
| HincII | GTYRAC | 2 cut(s) | 2286, 2368 |
| HindII | GTYRAC | 2 cut(s) | 2286, 2368 |
| HindIII | AAGCTT | 2 cut(s) | 1583, 1973 |
| HpaI | GTTAAC | 1 cut(s) | 2368 |
| HpaII | CCGG | 2 cut(s) | 524, 1217 |
| HphI | GGTGA | 6 cut(s) | 421, 1253, 2005, 2085, 2459, 2617 |
| Hpy166II | GTNNAC | 8 cut(s) | 203, 884, 950, 1094, 2286, 2315, 2368, 2627 |
| Hpy188I | TCNGA | 9 cut(s) | 170, 340, 550, 763, 805, 1170, 1848, 1925, 2464 |
| Hpy8I | GTNNAC | 8 cut(s) | 203, 884, 950, 1094, 2286, 2315, 2368, 2627 |
| HpyAV | CCTTC | 9 cut(s) | 226, 517, 1016, 1376, 1629, 1767, 1862, 1955, 2262 |
| HpyCH4III | ACNGT | 6 cut(s) | 679, 800, 1856, 2349, 2372, 2516 |
| HpyCH4IV | ACGT | 2 cut(s) | 807, 1511 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 1972, 2026, 2303 |
| HpySE526I | ACGT | 2 cut(s) | 807, 1511 |
| HspAI | GCGC | 1 cut(s) | 1633 |
| Ksp22I | TGATCA | 1 cut(s) | 1258 |
| KspAI | GTTAAC | 1 cut(s) | 2368 |
| Kzo9I | GATC | 5 cut(s) | 331, 1258, 1306, 1736, 2464 |
| LguI | GCTCTTC | 3 cut(s) | 489, 933, 2643 |
| LmnI | GCTCC | 2 cut(s) | 1654, 1758 |
| Lsp1109I | GCAGC | 4 cut(s) | 1089, 1514, 1674, 2694 |
| LweI | GCATC | 3 cut(s) | 159, 619, 2585 |
| MaeI | CTAG | 7 cut(s) | 108, 194, 276, 314, 347, 425, 740 |
| MaeII | ACGT | 2 cut(s) | 807, 1511 |
| MaeIII | GTNAC | 9 cut(s) | 427, 1313, 1675, 1850, 1978, 2073, 2236, 2247, 2446 |
| MalI | GATC | 5 cut(s) | 333, 1260, 1308, 1738, 2466 |
| MboI | GATC | 5 cut(s) | 331, 1258, 1306, 1736, 2464 |
| MfeI | CAATTG | 3 cut(s) | 1626, 2015, 2062 |
| MhlI | GDGCHC | 5 cut(s) | 546, 969, 2308, 2623, 2629 |
| MlyI | GAGTC | 5 cut(s) | 938, 1483, 1789, 2225, 2318 |
| Mph1103I | ATGCAT | 3 cut(s) | 634, 2263, 2600 |
| MroXI | GAANNNNTTC | 3 cut(s) | 243, 506, 2349 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1041, 2603 |
| MspA1I | CMGCKG | 1 cut(s) | 490 |
| MspCI | CTTAAG | 1 cut(s) | 1706 |
| MspI | CCGG | 2 cut(s) | 524, 1217 |
| MspR9I | CCNGG | 3 cut(s) | 945, 1991, 2187 |
| MunI | CAATTG | 3 cut(s) | 1626, 2015, 2062 |
| Mva1269I | GAATGC | 2 cut(s) | 508, 1956 |
| MvaI | CCWGG | 3 cut(s) | 945, 1991, 2187 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 1972, 2026, 2303 |
| NcoI | CCATGG | 1 cut(s) | 433 |
| NdeI | CATATG | 2 cut(s) | 451, 2731 |
| NdeII | GATC | 5 cut(s) | 331, 1258, 1306, 1736, 2464 |
| NlaIV | GGNNCC | 4 cut(s) | 1138, 1337, 2620, 2621 |
| NmuCI | GTSAC | 2 cut(s) | 427, 1850 |
| NsiI | ATGCAT | 3 cut(s) | 634, 2263, 2600 |
| NspI | RCATGY | 4 cut(s) | 422, 753, 2265, 2532 |
| PaeR7I | CTCGAG | 1 cut(s) | 2565 |
| PagI | TCATGA | 1 cut(s) | 2374 |
| PciI | ACATGT | 2 cut(s) | 418, 749 |
| PciSI | GCTCTTC | 3 cut(s) | 489, 933, 2643 |
| PctI | GAATGC | 2 cut(s) | 508, 1956 |
| PdmI | GAANNNNTTC | 3 cut(s) | 243, 506, 2349 |
| PfeI | GAWTC | 8 cut(s) | 393, 1066, 1405, 1499, 1546, 2090, 2409, 2735 |
| PflFI | GACNNNGTC | 1 cut(s) | 954 |
| PfoI | TCCNGGA | 1 cut(s) | 2185 |
| PkrI | GCNGC | 4 cut(s) | 1104, 1529, 1689, 2684 |
| PleI | GAGTC | 5 cut(s) | 937, 1482, 1788, 2225, 2318 |
| PpsI | GAGTC | 5 cut(s) | 937, 1482, 1788, 2225, 2318 |
| PpuMI | RGGWCCY | 1 cut(s) | 1335 |
| PscI | ACATGT | 2 cut(s) | 418, 749 |
| PshAI | GACNNNNGTC | 1 cut(s) | 928 |
| Psp124BI | GAGCTC | 1 cut(s) | 546 |
| Psp1406I | AACGTT | 1 cut(s) | 1511 |
| Psp5II | RGGWCCY | 1 cut(s) | 1335 |
| Psp6I | CCWGG | 3 cut(s) | 943, 1989, 2185 |
| PspGI | CCWGG | 3 cut(s) | 943, 1989, 2185 |
| PspN4I | GGNNCC | 4 cut(s) | 1138, 1337, 2620, 2621 |
| PspOMI | GGGCCC | 1 cut(s) | 2619 |
| PspPI | GGNCC | 5 cut(s) | 1136, 1335, 2055, 2619, 2620 |
| PspPPI | RGGWCCY | 1 cut(s) | 1335 |
| PspXI | VCTCGAGB | 1 cut(s) | 2565 |
| PsyI | GACNNNGTC | 1 cut(s) | 954 |
| PvuII | CAGCTG | 1 cut(s) | 490 |
| RsaI | GTAC | 7 cut(s) | 423, 921, 1390, 1745, 2068, 2316, 2669 |
| RsaNI | GTAC | 7 cut(s) | 422, 920, 1389, 1744, 2067, 2315, 2668 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1041, 2603 |
| SacI | GAGCTC | 1 cut(s) | 546 |
| SapI | GCTCTTC | 3 cut(s) | 489, 933, 2643 |
| SatI | GCNGC | 4 cut(s) | 1103, 1528, 1688, 2683 |
| Sau3AI | GATC | 5 cut(s) | 331, 1258, 1306, 1736, 2464 |
| Sau96I | GGNCC | 5 cut(s) | 1136, 1335, 2055, 2619, 2620 |
| SchI | GAGTC | 5 cut(s) | 938, 1483, 1789, 2225, 2318 |
| ScrFI | CCNGG | 3 cut(s) | 945, 1991, 2187 |
| SduI | GDGCHC | 5 cut(s) | 546, 969, 2308, 2623, 2629 |
| SfaNI | GCATC | 3 cut(s) | 159, 619, 2585 |
| SfcI | CTRYAG | 2 cut(s) | 203, 2571 |
| Sfr274I | CTCGAG | 1 cut(s) | 2565 |
| SinI | GGWCC | 2 cut(s) | 1335, 2055 |
| SlaI | CTCGAG | 1 cut(s) | 2565 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1041, 2603 |
| SmlI | CTYRAG | 8 cut(s) | 1159, 1364, 1427, 1531, 1706, 2141, 2319, 2565 |
| SmoI | CTYRAG | 8 cut(s) | 1159, 1364, 1427, 1531, 1706, 2141, 2319, 2565 |
| SpeI | ACTAGT | 1 cut(s) | 424 |
| SsiI | CCGC | 1 cut(s) | 305 |
| SspMI | CTAG | 7 cut(s) | 108, 194, 276, 314, 347, 425, 740 |
| SstI | GAGCTC | 1 cut(s) | 546 |
| StyD4I | CCNGG | 3 cut(s) | 943, 1989, 2185 |
| StyI | CCWWGG | 1 cut(s) | 433 |
| TaaI | ACNGT | 6 cut(s) | 679, 800, 1856, 2349, 2372, 2516 |
| TaiI | ACGT | 2 cut(s) | 810, 1514 |
| TaqI | TCGA | 3 cut(s) | 415, 1305, 2566 |
| TaqII | GACCGA | 2 cut(s) | 179, 2072 |
| TatI | WGTACW | 2 cut(s) | 421, 2066 |
| TfiI | GAWTC | 8 cut(s) | 393, 1066, 1405, 1499, 1546, 2090, 2409, 2735 |
| TscAI | CASTG | 3 cut(s) | 1645, 1870, 2130 |
| TseFI | GTSAC | 2 cut(s) | 427, 1850 |
| TseI | GCWGC | 4 cut(s) | 1102, 1527, 1687, 2682 |
| Tsp45I | GTSAC | 2 cut(s) | 427, 1850 |
| TspGWI | ACGGA | 2 cut(s) | 673, 2319 |
| TspRI | CASTG | 3 cut(s) | 1645, 1870, 2130 |
| Tth111I | GACNNNGTC | 1 cut(s) | 954 |
| Vha464I | CTTAAG | 1 cut(s) | 1706 |
| VneI | GTGCAC | 1 cut(s) | 2625 |
| VpaK11BI | GGWCC | 2 cut(s) | 1335, 2055 |
| XapI | RAATTY | 6 cut(s) | 126, 213, 1393, 1553, 1875, 2196 |
| XbaI | TCTAGA | 1 cut(s) | 739 |
| XceI | RCATGY | 4 cut(s) | 422, 753, 2265, 2532 |
| XhoI | CTCGAG | 1 cut(s) | 2565 |
| XmiI | GTMKAC | 2 cut(s) | 202, 883 |
| XmnI | GAANNNNTTC | 3 cut(s) | 243, 506, 2349 |
| XspI | CTAG | 7 cut(s) | 108, 194, 276, 314, 347, 425, 740 |
| Zsp2I | ATGCAT | 3 cut(s) | 634, 2263, 2600 |