TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 11 - 187 | 2.2e-47 | TIR domain |
| TIR_2 | PF13676 | 13 - 108 | 1.4e-13 | TIR domain |
| ATPase_2 | PF01637 | 190 - 302 | 3.2e-06 | ATPase domain predominantly from Archaea |
| NB-ARC | PF00931 | 202 - 366 | 9.3e-18 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 433 - 503 | 9.4e-13 | Disease resistance protein Roq1-like, winged-helix domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1074 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1055, 1483 |
| AccI | GTMKAC | 2 cut(s) | 14, 1528 |
| AciI | CCGC | 1 cut(s) | 645 |
| AclWI | GGATC | 4 cut(s) | 314, 327, 656, 1468 |
| AcoI | YGGCCR | 1 cut(s) | 933 |
| AcsI | RAATTY | 8 cut(s) | 580, 740, 750, 815, 1173, 1314, 1427, 1704 |
| AcuI | CTGAAG | 2 cut(s) | 596, 1644 |
| AdeI | CACNNNGTG | 1 cut(s) | 243 |
| AfaI | GTAC | 5 cut(s) | 516, 1024, 1222, 1569, 1588 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 149, 1055, 1483 |
| AflIII | ACRYGT | 1 cut(s) | 36 |
| AgsI | TTSAA | 8 cut(s) | 127, 272, 453, 746, 808, 1601, 1615, 1660 |
| AjiI | CACGTC | 2 cut(s) | 12, 37 |
| AjnI | CCWGG | 3 cut(s) | 239, 1149, 1522 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 214, 246 |
| AluBI | AGCT | 7 cut(s) | 172, 284, 478, 711, 1036, 1112, 1166 |
| AluI | AGCT | 7 cut(s) | 172, 284, 478, 711, 1036, 1112, 1166 |
| Alw21I | GWGCWC | 3 cut(s) | 1063, 1275, 1399 |
| Alw26I | GTCTC | 1 cut(s) | 405 |
| AlwI | GGATC | 4 cut(s) | 314, 327, 656, 1468 |
| Ama87I | CYCGRG | 1 cut(s) | 1418 |
| AoxI | GGCC | 2 cut(s) | 933, 1153 |
| ApeKI | GCWGC | 2 cut(s) | 711, 1000 |
| ApoI | RAATTY | 8 cut(s) | 580, 740, 750, 815, 1173, 1314, 1427, 1704 |
| AseI | ATTAAT | 1 cut(s) | 1245 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1430 |
| AspLEI | GCGC | 1 cut(s) | 111 |
| AspS9I | GGNCC | 1 cut(s) | 1153 |
| AsuHPI | GGTGA | 2 cut(s) | 520, 1358 |
| AsuII | TTCGAA | 1 cut(s) | 1773 |
| AvaI | CYCGRG | 1 cut(s) | 1418 |
| BamHI | GGATCC | 1 cut(s) | 319 |
| BbsI | GAAGAC | 2 cut(s) | 396, 1663 |
| Bbv12I | GWGCWC | 3 cut(s) | 1063, 1275, 1399 |
| BbvI | GCAGC | 2 cut(s) | 698, 987 |
| BccI | CCATC | 7 cut(s) | 556, 1013, 1049, 1283, 1399, 1805, 1834 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 955, 989 |
| BciT130I | CCWGG | 3 cut(s) | 241, 1151, 1524 |
| BclI | TGATCA | 2 cut(s) | 1252, 1804 |
| BcoDI | GTCTC | 1 cut(s) | 405 |
| BfaI | CTAG | 6 cut(s) | 285, 669, 923, 984, 1205, 1818 |
| BisI | GCNGC | 2 cut(s) | 712, 1001 |
| BlsI | GCNGC | 2 cut(s) | 713, 1002 |
| BmcAI | AGTACT | 1 cut(s) | 1569 |
| Bme1390I | CCNGG | 3 cut(s) | 241, 1151, 1524 |
| BmeT110I | CYCGRG | 1 cut(s) | 1418 |
| BmgBI | CACGTC | 2 cut(s) | 12, 37 |
| BmgT120I | GGNCC | 1 cut(s) | 1153 |
| BmiI | GGNNCC | 3 cut(s) | 321, 541, 1183 |
| BmrFI | CCNGG | 3 cut(s) | 241, 1151, 1524 |
| BmsI | GCATC | 4 cut(s) | 1012, 1452, 1555, 1583 |
| BpiI | GAAGAC | 2 cut(s) | 396, 1663 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1717, 1749 |
| Bpu14I | TTCGAA | 1 cut(s) | 1773 |
| BpuEI | CTTGAG | 1 cut(s) | 1783 |
| BsaBI | GATNNNNATC | 1 cut(s) | 318 |
| BsaJI | CCNNGG | 2 cut(s) | 363, 1150 |
| BsaWI | WCCGGW | 2 cut(s) | 601, 1102 |
| BsaXI | ACNNNNNCTCC | 1 cut(s) | 31 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 149, 1055, 1483 |
| Bse118I | RCCGGY | 1 cut(s) | 786 |
| Bse1I | ACTGG | 3 cut(s) | 302, 849, 953 |
| Bse8I | GATNNNNATC | 1 cut(s) | 318 |
| BseBI | CCWGG | 3 cut(s) | 241, 1151, 1524 |
| BseDI | CCNNGG | 2 cut(s) | 363, 1150 |
| BseJI | GATNNNNATC | 1 cut(s) | 318 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 149, 1055, 1483 |
| BseMII | CTCAG | 5 cut(s) | 35, 156, 459, 747, 1682 |
| BseNI | ACTGG | 3 cut(s) | 302, 849, 953 |
| BseRI | GAGGAG | 2 cut(s) | 9, 1436 |
| BseXI | GCAGC | 2 cut(s) | 698, 987 |
| BsgI | GTGCAG | 1 cut(s) | 524 |
| BshFI | GGCC | 2 cut(s) | 935, 1155 |
| BsiHKAI | GWGCWC | 3 cut(s) | 1063, 1275, 1399 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1418 |
| BsiSI | CCGG | 4 cut(s) | 602, 787, 936, 1103 |
| BslFI | GGGAC | 2 cut(s) | 361, 1500 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 149, 1055, 1483 |
| BsmAI | GTCTC | 1 cut(s) | 405 |
| BsmBI | CGTCTC | 1 cut(s) | 405 |
| BsmFI | GGGAC | 2 cut(s) | 361, 1500 |
| BsmI | GAATGC | 2 cut(s) | 159, 278 |
| BsnI | GGCC | 2 cut(s) | 935, 1155 |
| BsoBI | CYCGRG | 1 cut(s) | 1418 |
| Bsp119I | TTCGAA | 1 cut(s) | 1773 |
| Bsp1286I | GDGCHC | 3 cut(s) | 1063, 1275, 1399 |
| Bsp143I | GATC | 7 cut(s) | 319, 648, 1252, 1473, 1627, 1651, 1804 |
| Bsp19I | CCATGG | 1 cut(s) | 363 |
| BspACI | CCGC | 1 cut(s) | 645 |
| BspANI | GGCC | 2 cut(s) | 935, 1155 |
| BspCNI | CTCAG | 5 cut(s) | 36, 157, 460, 748, 1683 |
| BspHI | TCATGA | 1 cut(s) | 1630 |
| BspLI | GGNNCC | 3 cut(s) | 321, 541, 1183 |
| BspPI | GGATC | 4 cut(s) | 314, 327, 656, 1468 |
| BspQI | GCTCTTC | 1 cut(s) | 468 |
| BspT104I | TTCGAA | 1 cut(s) | 1773 |
| BsrFI | RCCGGY | 1 cut(s) | 786 |
| BsrI | ACTGG | 3 cut(s) | 302, 849, 953 |
| BssAI | RCCGGY | 1 cut(s) | 786 |
| BssECI | CCNNGG | 2 cut(s) | 363, 1150 |
| BssMI | GATC | 7 cut(s) | 319, 648, 1252, 1473, 1627, 1651, 1804 |
| BssT1I | CCWWGG | 1 cut(s) | 363 |
| Bst2UI | CCWGG | 3 cut(s) | 241, 1151, 1524 |
| Bst4CI | ACNGT | 5 cut(s) | 105, 258, 992, 1133, 1454 |
| Bst6I | CTCTTC | 3 cut(s) | 468, 1304, 1500 |
| BstBI | TTCGAA | 1 cut(s) | 1773 |
| BstC8I | GCNNGC | 1 cut(s) | 1038 |
| BstDEI | CTNAG | 8 cut(s) | 44, 165, 468, 595, 756, 1064, 1376, 1691 |
| BstDSI | CCRYGG | 1 cut(s) | 363 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 147 |
| BstHHI | GCGC | 1 cut(s) | 111 |
| BstKTI | GATC | 7 cut(s) | 322, 651, 1255, 1476, 1630, 1654, 1807 |
| BstMAI | GTCTC | 1 cut(s) | 405 |
| BstMBI | GATC | 7 cut(s) | 319, 648, 1252, 1473, 1627, 1651, 1804 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 290, 787, 1042 |
| BstNI | CCWGG | 3 cut(s) | 241, 1151, 1524 |
| BstNSI | RCATGY | 1 cut(s) | 1335 |
| BstSCI | CCNGG | 3 cut(s) | 239, 1149, 1522 |
| BstV1I | GCAGC | 2 cut(s) | 698, 987 |
| BstV2I | GAAGAC | 2 cut(s) | 396, 1663 |
| BstX2I | RGATCY | 1 cut(s) | 319 |
| BstYI | RGATCY | 1 cut(s) | 319 |
| BsuRI | GGCC | 2 cut(s) | 935, 1155 |
| BtgI | CCRYGG | 1 cut(s) | 363 |
| BtrI | CACGTC | 2 cut(s) | 12, 37 |
| Cac8I | GCNNGC | 1 cut(s) | 1038 |
| CciI | TCATGA | 1 cut(s) | 1630 |
| CfoI | GCGC | 1 cut(s) | 111 |
| Cfr10I | RCCGGY | 1 cut(s) | 786 |
| Cfr13I | GGNCC | 1 cut(s) | 1153 |
| CseI | GACGC | 2 cut(s) | 422, 1539 |
| CsiI | ACCWGGT | 1 cut(s) | 239 |
| Csp6I | GTAC | 5 cut(s) | 515, 1023, 1221, 1568, 1587 |
| CviAII | CATG | 8 cut(s) | 277, 329, 364, 374, 1332, 1400, 1466, 1631 |
| CviQI | GTAC | 5 cut(s) | 515, 1023, 1221, 1568, 1587 |
| DdeI | CTNAG | 8 cut(s) | 44, 165, 468, 595, 756, 1064, 1376, 1691 |
| DpnI | GATC | 7 cut(s) | 321, 650, 1254, 1475, 1629, 1653, 1806 |
| DpnII | GATC | 7 cut(s) | 319, 648, 1252, 1473, 1627, 1651, 1804 |
| DraIII | CACNNNGTG | 1 cut(s) | 243 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1074 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1074 |
| EaeI | YGGCCR | 1 cut(s) | 933 |
| Eam1104I | CTCTTC | 3 cut(s) | 468, 1304, 1500 |
| EarI | CTCTTC | 3 cut(s) | 468, 1304, 1500 |
| Eco130I | CCWWGG | 1 cut(s) | 363 |
| Eco57I | CTGAAG | 2 cut(s) | 596, 1644 |
| Eco88I | CYCGRG | 1 cut(s) | 1418 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 147 |
| EcoRII | CCWGG | 3 cut(s) | 239, 1149, 1522 |
| EcoT14I | CCWWGG | 1 cut(s) | 363 |
| EcoT22I | ATGCAT | 2 cut(s) | 278, 1467 |
| ErhI | CCWWGG | 1 cut(s) | 363 |
| Esp3I | CGTCTC | 1 cut(s) | 405 |
| FaeI | CATG | 8 cut(s) | 280, 332, 367, 377, 1335, 1403, 1469, 1634 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1497, 1529, 1593, 1625 |
| FaqI | GGGAC | 2 cut(s) | 361, 1500 |
| FatI | CATG | 8 cut(s) | 276, 328, 363, 373, 1331, 1399, 1465, 1630 |
| FauI | CCCGC | 1 cut(s) | 638 |
| FbaI | TGATCA | 2 cut(s) | 1252, 1804 |
| FblI | GTMKAC | 2 cut(s) | 14, 1528 |
| Fnu4HI | GCNGC | 2 cut(s) | 712, 1001 |
| Fsp4HI | GCNGC | 2 cut(s) | 712, 1001 |
| FspBI | CTAG | 6 cut(s) | 285, 669, 923, 984, 1205, 1818 |
| GlaI | GCGC | 1 cut(s) | 110 |
| GluI | GCNGC | 2 cut(s) | 712, 1001 |
| HaeIII | GGCC | 2 cut(s) | 935, 1155 |
| HapII | CCGG | 4 cut(s) | 602, 787, 936, 1103 |
| HgaI | GACGC | 2 cut(s) | 422, 1539 |
| HhaI | GCGC | 1 cut(s) | 111 |
| Hin1II | CATG | 8 cut(s) | 280, 332, 367, 377, 1335, 1403, 1469, 1634 |
| Hin6I | GCGC | 1 cut(s) | 109 |
| HinP1I | GCGC | 1 cut(s) | 109 |
| HincII | GTYRAC | 1 cut(s) | 1529 |
| HindII | GTYRAC | 1 cut(s) | 1529 |
| HindIII | AAGCTT | 1 cut(s) | 1110 |
| HpaII | CCGG | 4 cut(s) | 602, 787, 936, 1103 |
| HphI | GGTGA | 2 cut(s) | 520, 1358 |
| Hpy166II | GTNNAC | 5 cut(s) | 15, 447, 1349, 1411, 1529 |
| Hpy8I | GTNNAC | 5 cut(s) | 15, 447, 1349, 1411, 1529 |
| Hpy99I | CGWCG | 2 cut(s) | 38, 1533 |
| HpyAV | CCTTC | 5 cut(s) | 727, 802, 937, 1595, 1739 |
| HpyCH4III | ACNGT | 5 cut(s) | 105, 258, 992, 1133, 1454 |
| HpyCH4IV | ACGT | 2 cut(s) | 11, 36 |
| HpyCH4V | TGCA | 8 cut(s) | 182, 203, 276, 505, 722, 781, 1003, 1465 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 290, 787, 1042 |
| HpyF3I | CTNAG | 8 cut(s) | 44, 165, 468, 595, 756, 1064, 1376, 1691 |
| HpySE526I | ACGT | 2 cut(s) | 11, 36 |
| Hsp92II | CATG | 8 cut(s) | 280, 332, 367, 377, 1335, 1403, 1469, 1634 |
| HspAI | GCGC | 1 cut(s) | 109 |
| Ksp22I | TGATCA | 2 cut(s) | 1252, 1804 |
| Kzo9I | GATC | 7 cut(s) | 319, 648, 1252, 1473, 1627, 1651, 1804 |
| LguI | GCTCTTC | 1 cut(s) | 468 |
| LmnI | GCTCC | 3 cut(s) | 177, 1058, 1357 |
| Lsp1109I | GCAGC | 2 cut(s) | 698, 987 |
| LweI | GCATC | 4 cut(s) | 1012, 1452, 1555, 1583 |
| MabI | ACCWGGT | 1 cut(s) | 239 |
| MaeI | CTAG | 6 cut(s) | 285, 669, 923, 984, 1205, 1818 |
| MaeII | ACGT | 2 cut(s) | 11, 36 |
| MaeIII | GTNAC | 1 cut(s) | 976 |
| MalI | GATC | 7 cut(s) | 321, 650, 1254, 1475, 1629, 1653, 1806 |
| MboI | GATC | 7 cut(s) | 319, 648, 1252, 1473, 1627, 1651, 1804 |
| MfeI | CAATTG | 1 cut(s) | 1596 |
| MflI | RGATCY | 1 cut(s) | 319 |
| MhlI | GDGCHC | 3 cut(s) | 1063, 1275, 1399 |
| MlyI | GAGTC | 3 cut(s) | 655, 775, 1062 |
| MmeI | TCCRAC | 3 cut(s) | 358, 1152, 1407 |
| Mph1103I | ATGCAT | 2 cut(s) | 278, 1467 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1430 |
| MseI | TTAA | 8 cut(s) | 260, 369, 419, 858, 1170, 1230, 1245, 1436 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1008, 1095 |
| MspI | CCGG | 4 cut(s) | 602, 787, 936, 1103 |
| MspR9I | CCNGG | 3 cut(s) | 241, 1151, 1524 |
| MunI | CAATTG | 1 cut(s) | 1596 |
| Mva1269I | GAATGC | 2 cut(s) | 159, 278 |
| MvaI | CCWGG | 3 cut(s) | 241, 1151, 1524 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 290, 787, 1042 |
| NcoI | CCATGG | 1 cut(s) | 363 |
| NdeII | GATC | 7 cut(s) | 319, 648, 1252, 1473, 1627, 1651, 1804 |
| NlaIII | CATG | 8 cut(s) | 280, 332, 367, 377, 1335, 1403, 1469, 1634 |
| NlaIV | GGNNCC | 3 cut(s) | 321, 541, 1183 |
| NsiI | ATGCAT | 2 cut(s) | 278, 1467 |
| NspI | RCATGY | 1 cut(s) | 1335 |
| NspV | TTCGAA | 1 cut(s) | 1773 |
| PaeR7I | CTCGAG | 1 cut(s) | 1418 |
| PagI | TCATGA | 1 cut(s) | 1630 |
| PciSI | GCTCTTC | 1 cut(s) | 468 |
| PctI | GAATGC | 2 cut(s) | 159, 278 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1430 |
| PfeI | GAWTC | 8 cut(s) | 191, 265, 566, 969, 1366, 1634, 1660, 1757 |
| PflFI | GACNNNGTC | 1 cut(s) | 1533 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1055, 1483 |
| PkrI | GCNGC | 2 cut(s) | 713, 1002 |
| PleI | GAGTC | 3 cut(s) | 655, 774, 1062 |
| PpsI | GAGTC | 3 cut(s) | 655, 774, 1062 |
| PshBI | ATTAAT | 1 cut(s) | 1245 |
| Psp6I | CCWGG | 3 cut(s) | 239, 1149, 1522 |
| PspGI | CCWGG | 3 cut(s) | 239, 1149, 1522 |
| PspN4I | GGNNCC | 3 cut(s) | 321, 541, 1183 |
| PspPI | GGNCC | 1 cut(s) | 1153 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 819, 851 |
| PsuI | RGATCY | 1 cut(s) | 319 |
| PsyI | GACNNNGTC | 1 cut(s) | 1533 |
| RsaI | GTAC | 5 cut(s) | 516, 1024, 1222, 1569, 1588 |
| RsaNI | GTAC | 5 cut(s) | 515, 1023, 1221, 1568, 1587 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1008, 1095 |
| SalI | GTCGAC | 1 cut(s) | 1527 |
| SapI | GCTCTTC | 1 cut(s) | 468 |
| SaqAI | TTAA | 8 cut(s) | 260, 369, 419, 858, 1170, 1230, 1245, 1436 |
| SatI | GCNGC | 2 cut(s) | 712, 1001 |
| Sau3AI | GATC | 7 cut(s) | 319, 648, 1252, 1473, 1627, 1651, 1804 |
| Sau96I | GGNCC | 1 cut(s) | 1153 |
| ScaI | AGTACT | 1 cut(s) | 1569 |
| SchI | GAGTC | 3 cut(s) | 655, 775, 1062 |
| ScrFI | CCNGG | 3 cut(s) | 241, 1151, 1524 |
| SduI | GDGCHC | 3 cut(s) | 1063, 1275, 1399 |
| SexAI | ACCWGGT | 1 cut(s) | 239 |
| SfaNI | GCATC | 4 cut(s) | 1012, 1452, 1555, 1583 |
| Sfr274I | CTCGAG | 1 cut(s) | 1418 |
| SfuI | TTCGAA | 1 cut(s) | 1773 |
| SlaI | CTCGAG | 1 cut(s) | 1418 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1008, 1095 |
| SmlI | CTYRAG | 2 cut(s) | 1418, 1762 |
| SmoI | CTYRAG | 2 cut(s) | 1418, 1762 |
| SsiI | CCGC | 1 cut(s) | 645 |
| SspMI | CTAG | 6 cut(s) | 285, 669, 923, 984, 1205, 1818 |
| StyD4I | CCNGG | 3 cut(s) | 239, 1149, 1522 |
| StyI | CCWWGG | 1 cut(s) | 363 |
| TaaI | ACNGT | 5 cut(s) | 105, 258, 992, 1133, 1454 |
| TaiI | ACGT | 2 cut(s) | 14, 39 |
| TaqI | TCGA | 6 cut(s) | 60, 831, 1119, 1419, 1528, 1773 |
| TatI | WGTACW | 2 cut(s) | 1220, 1567 |
| TfiI | GAWTC | 8 cut(s) | 191, 265, 566, 969, 1366, 1634, 1660, 1757 |
| Tru1I | TTAA | 8 cut(s) | 260, 369, 419, 858, 1170, 1230, 1245, 1436 |
| Tru9I | TTAA | 8 cut(s) | 260, 369, 419, 858, 1170, 1230, 1245, 1436 |
| TseI | GCWGC | 2 cut(s) | 711, 1000 |
| TspDTI | ATGAA | 9 cut(s) | 222, 267, 390, 501, 764, 827, 1113, 1149, 1647 |
| TspGWI | ACGGA | 1 cut(s) | 1504 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1533 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1055, 1483 |
| VspI | ATTAAT | 1 cut(s) | 1245 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 147 |
| XapI | RAATTY | 8 cut(s) | 580, 740, 750, 815, 1173, 1314, 1427, 1704 |
| XbaI | TCTAGA | 1 cut(s) | 1204 |
| XceI | RCATGY | 1 cut(s) | 1335 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 244, 550, 1048 |
| XhoI | CTCGAG | 1 cut(s) | 1418 |
| XmiI | GTMKAC | 2 cut(s) | 14, 1528 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1430 |
| XspI | CTAG | 6 cut(s) | 285, 669, 923, 984, 1205, 1818 |
| ZrmI | AGTACT | 1 cut(s) | 1569 |
| Zsp2I | ATGCAT | 2 cut(s) | 278, 1467 |