TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 29 - 204 | 4.5e-56 | TIR domain |
| TIR_2 | PF13676 | 31 - 128 | 5.5e-15 | TIR domain |
| NB-ARC | PF00931 | 222 - 380 | 2.3e-21 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 448 - 516 | 5.4e-17 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 582 - 693 | 1.1e-06 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 614 - 710 | 2.7e-12 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 659 - 749 | 9.5e-08 | Leucine-rich repeat region |
| C-JID | PF20160 | 918 - 1054 | 7.8e-06 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1025 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 3005, 3461, 3938 |
| AccBSI | CCGCTC | 1 cut(s) | 1239 |
| AccI | GTMKAC | 2 cut(s) | 3145, 3328 |
| AccII | CGCG | 1 cut(s) | 4082 |
| AciI | CCGC | 8 cut(s) | 121, 751, 1239, 2380, 3035, 3387, 3512, 3580 |
| AclI | AACGTT | 1 cut(s) | 2985 |
| AclWI | GGATC | 4 cut(s) | 371, 1025, 2010, 3769 |
| AcoI | YGGCCR | 2 cut(s) | 495, 3139 |
| AcsI | RAATTY | 6 cut(s) | 168, 539, 1687, 2528, 3229, 3623 |
| AcuI | CTGAAG | 7 cut(s) | 163, 510, 1502, 1835, 2216, 2619, 3395 |
| AcvI | CACGTG | 1 cut(s) | 3758 |
| AdeI | CACNNNGTG | 1 cut(s) | 3461 |
| AfaI | GTAC | 8 cut(s) | 390, 1314, 1555, 1602, 2265, 3655, 3820, 3970 |
| AfeI | AGCGCT | 1 cut(s) | 2627 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 1275, 2223, 2448, 2843, 3005, 3461, 3938 |
| AflII | CTTAAG | 2 cut(s) | 97, 2332 |
| AflIII | ACRYGT | 1 cut(s) | 4040 |
| AhlI | ACTAGT | 1 cut(s) | 2891 |
| AjnI | CCWGG | 3 cut(s) | 290, 1564, 3825 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 979, 1011, 3977, 4009 |
| AleI | CACNNNNGTG | 1 cut(s) | 3846 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 3094, 3126 |
| Alw21I | GWGCWC | 7 cut(s) | 1879, 2231, 2514, 2716, 3080, 3843, 3951 |
| Alw26I | GTCTC | 6 cut(s) | 1029, 1673, 2023, 3283, 3336, 3579 |
| Alw44I | GTGCAC | 4 cut(s) | 1875, 2227, 3076, 3839 |
| AlwI | GGATC | 4 cut(s) | 371, 1025, 2010, 3769 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2503 |
| Ama87I | CYCGRG | 1 cut(s) | 3972 |
| Aor51HI | AGCGCT | 1 cut(s) | 2627 |
| AoxI | GGCC | 6 cut(s) | 495, 622, 1080, 1198, 2588, 3139 |
| ApaLI | GTGCAC | 4 cut(s) | 1875, 2227, 3076, 3839 |
| ApeKI | GCWGC | 6 cut(s) | 479, 1960, 2085, 2781, 2784, 3566 |
| ApoI | RAATTY | 6 cut(s) | 168, 539, 1687, 2528, 3229, 3623 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 904, 936 |
| AseI | ATTAAT | 1 cut(s) | 1974 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 1130, 1539, 2566, 3408 |
| AspLEI | GCGC | 2 cut(s) | 1575, 2628 |
| AspS9I | GGNCC | 5 cut(s) | 748, 1226, 1699, 2377, 2948 |
| AsuC2I | CCSGG | 1 cut(s) | 1696 |
| AsuHPI | GGTGA | 5 cut(s) | 122, 166, 1745, 1919, 3136 |
| AvaI | CYCGRG | 1 cut(s) | 3972 |
| AvaII | GGWCC | 5 cut(s) | 748, 1226, 1699, 2377, 2948 |
| BaeGI | GKGCMC | 5 cut(s) | 1879, 2231, 3080, 3662, 3843 |
| BalI | TGGCCA | 1 cut(s) | 497 |
| BanII | GRGCYC | 3 cut(s) | 2514, 3951, 3984 |
| BauI | CACGAG | 1 cut(s) | 2915 |
| BbrPI | CACGTG | 1 cut(s) | 3758 |
| BbsI | GAAGAC | 1 cut(s) | 919 |
| Bbv12I | GWGCWC | 7 cut(s) | 1879, 2231, 2514, 2716, 3080, 3843, 3951 |
| BbvI | GCAGC | 6 cut(s) | 466, 1947, 2072, 2793, 2796, 3553 |
| BccI | CCATC | 9 cut(s) | 388, 637, 694, 1325, 1765, 1934, 2348, 2450, 2719 |
| BceAI | ACGGC | 5 cut(s) | 242, 2821, 3126, 3468, 3740 |
| BciT130I | CCWGG | 3 cut(s) | 292, 1566, 3827 |
| BciVI | GTATCC | 2 cut(s) | 109, 2840 |
| BclI | TGATCA | 2 cut(s) | 427, 2572 |
| BcnI | CCSGG | 1 cut(s) | 1696 |
| BcoDI | GTCTC | 6 cut(s) | 1029, 1673, 2023, 3283, 3336, 3579 |
| BcuI | ACTAGT | 1 cut(s) | 2891 |
| BfaI | CTAG | 6 cut(s) | 818, 1982, 2327, 2892, 3099, 3504 |
| BfoI | RGCGCY | 1 cut(s) | 2629 |
| BfrI | CTTAAG | 2 cut(s) | 97, 2332 |
| BfuI | GTATCC | 2 cut(s) | 109, 2840 |
| BglII | AGATCT | 1 cut(s) | 1713 |
| BisI | GCNGC | 6 cut(s) | 480, 1961, 2086, 2782, 2785, 3567 |
| BlsI | GCNGC | 6 cut(s) | 481, 1962, 2087, 2783, 2786, 3568 |
| BmcAI | AGTACT | 1 cut(s) | 3970 |
| Bme1390I | CCNGG | 4 cut(s) | 292, 1566, 1696, 3827 |
| Bme18I | GGWCC | 5 cut(s) | 748, 1226, 1699, 2377, 2948 |
| BmeT110I | CYCGRG | 1 cut(s) | 3972 |
| BmgT120I | GGNCC | 5 cut(s) | 748, 1226, 1699, 2377, 2948 |
| BmiI | GGNNCC | 5 cut(s) | 1228, 1700, 1701, 2684, 3981 |
| BmrFI | CCNGG | 4 cut(s) | 292, 1566, 1696, 3827 |
| BmrI | ACTGGG | 1 cut(s) | 3516 |
| BmsI | GCATC | 6 cut(s) | 1494, 2137, 2163, 3046, 3398, 3779 |
| BmuI | ACTGGG | 1 cut(s) | 3516 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2334 |
| BpiI | GAAGAC | 1 cut(s) | 919 |
| BpmI | CTGGAG | 2 cut(s) | 256, 3360 |
| BpuEI | CTTGAG | 5 cut(s) | 218, 1130, 1291, 1730, 1868 |
| BpuMI | CCSGG | 1 cut(s) | 1696 |
| BsaAI | YACGTR | 3 cut(s) | 3653, 3758, 4041 |
| BsaBI | GATNNNNATC | 3 cut(s) | 375, 1398, 2571 |
| BsaI | GGTCTC | 2 cut(s) | 1673, 3579 |
| BsaJI | CCNNGG | 4 cut(s) | 547, 1565, 1695, 2837 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 3261, 3291 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 1275, 2223, 2448, 2843, 3005, 3461, 3938 |
| Bse1I | ACTGG | 3 cut(s) | 359, 3010, 3522 |
| Bse3DI | GCAATG | 1 cut(s) | 3422 |
| Bse8I | GATNNNNATC | 3 cut(s) | 375, 1398, 2571 |
| BseBI | CCWGG | 3 cut(s) | 292, 1566, 3827 |
| BseDI | CCNNGG | 4 cut(s) | 547, 1565, 1695, 2837 |
| BseGI | GGATG | 9 cut(s) | 190, 310, 543, 705, 886, 1509, 1757, 3690, 3794 |
| BseJI | GATNNNNATC | 3 cut(s) | 375, 1398, 2571 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 1275, 2223, 2448, 2843, 3005, 3461, 3938 |
| BseMI | GCAATG | 1 cut(s) | 3422 |
| BseMII | CTCAG | 5 cut(s) | 1669, 1786, 2399, 3395, 3935 |
| BseNI | ACTGG | 3 cut(s) | 359, 3010, 3522 |
| BseRI | GAGGAG | 3 cut(s) | 830, 3282, 3992 |
| BseSI | GKGCMC | 5 cut(s) | 1879, 2231, 3080, 3662, 3843 |
| BseXI | GCAGC | 6 cut(s) | 466, 1947, 2072, 2793, 2796, 3553 |
| Bsh1236I | CGCG | 1 cut(s) | 4082 |
| BshFI | GGCC | 6 cut(s) | 497, 624, 1082, 1200, 2590, 3141 |
| BsiHKAI | GWGCWC | 7 cut(s) | 1879, 2231, 2514, 2716, 3080, 3843, 3951 |
| BsiHKCI | CYCGRG | 1 cut(s) | 3972 |
| BsiSI | CCGG | 1 cut(s) | 1695 |
| BsiWI | CGTACG | 1 cut(s) | 3653 |
| BslFI | GGGAC | 5 cut(s) | 1156, 1685, 1957, 2981, 3017 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 1275, 2223, 2448, 2843, 3005, 3461, 3938 |
| BsmAI | GTCTC | 6 cut(s) | 1029, 1673, 2023, 3283, 3336, 3579 |
| BsmBI | CGTCTC | 2 cut(s) | 1029, 3283 |
| BsmFI | GGGAC | 5 cut(s) | 1156, 1685, 1957, 2981, 3017 |
| BsmI | GAATGC | 3 cut(s) | 1922, 3644, 3684 |
| BsnI | GGCC | 6 cut(s) | 497, 624, 1082, 1200, 2590, 3141 |
| Bso31I | GGTCTC | 2 cut(s) | 1673, 3579 |
| BsoBI | CYCGRG | 1 cut(s) | 3972 |
| Bsp1286I | GDGCHC | 9 cut(s) | 1879, 2231, 2514, 2716, 3080, 3662, 3843, 3951, 3984 |
| BspACI | CCGC | 8 cut(s) | 121, 751, 1239, 2380, 3035, 3387, 3512, 3580 |
| BspANI | GGCC | 6 cut(s) | 497, 624, 1082, 1200, 2590, 3141 |
| BspCNI | CTCAG | 5 cut(s) | 1668, 1785, 2400, 3394, 3934 |
| BspFNI | CGCG | 1 cut(s) | 4082 |
| BspHI | TCATGA | 2 cut(s) | 430, 2695 |
| BspLI | GGNNCC | 5 cut(s) | 1228, 1700, 1701, 2684, 3981 |
| BspPI | GGATC | 4 cut(s) | 371, 1025, 2010, 3769 |
| BspQI | GCTCTTC | 3 cut(s) | 1811, 2704, 2794 |
| BspTI | CTTAAG | 2 cut(s) | 97, 2332 |
| BspTNI | GGTCTC | 2 cut(s) | 1673, 3579 |
| BsrBI | CCGCTC | 1 cut(s) | 1239 |
| BsrDI | GCAATG | 1 cut(s) | 3422 |
| BsrI | ACTGG | 3 cut(s) | 359, 3010, 3522 |
| BssECI | CCNNGG | 4 cut(s) | 547, 1565, 1695, 2837 |
| BssSI | CACGAG | 1 cut(s) | 2915 |
| BssT1I | CCWWGG | 1 cut(s) | 547 |
| Bst2BI | CACGAG | 1 cut(s) | 2915 |
| Bst2UI | CCWGG | 3 cut(s) | 292, 1566, 3827 |
| Bst6I | CTCTTC | 7 cut(s) | 34, 660, 1811, 2704, 2794, 2958, 3717 |
| BstAFI | CTTAAG | 2 cut(s) | 97, 2332 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1513, 2503 |
| BstBAI | YACGTR | 3 cut(s) | 3653, 3758, 4041 |
| BstC8I | GCNNGC | 9 cut(s) | 234, 975, 1277, 2432, 2499, 2640, 2834, 3094, 3990 |
| BstDEI | CTNAG | 8 cut(s) | 1655, 1746, 1772, 2006, 2408, 3381, 3696, 3921 |
| BstDSI | CCRYGG | 1 cut(s) | 2837 |
| BstEII | GGTNACC | 1 cut(s) | 3851 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1273 |
| BstF5I | GGATG | 9 cut(s) | 190, 310, 543, 705, 886, 1509, 1757, 3690, 3794 |
| BstFNI | CGCG | 1 cut(s) | 4082 |
| BstH2I | RGCGCY | 1 cut(s) | 2629 |
| BstHHI | GCGC | 2 cut(s) | 1575, 2628 |
| BstMAI | GTCTC | 6 cut(s) | 1029, 1673, 2023, 3283, 3336, 3579 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 1245, 1513, 1570, 2458, 2503, 3563 |
| BstNI | CCWGG | 3 cut(s) | 292, 1566, 3827 |
| BstNSI | RCATGY | 2 cut(s) | 1377, 2434 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2334 |
| BstPI | GGTNACC | 1 cut(s) | 3851 |
| BstSCI | CCNGG | 4 cut(s) | 290, 1564, 1694, 3825 |
| BstSLI | GKGCMC | 5 cut(s) | 1879, 2231, 3080, 3662, 3843 |
| BstUI | CGCG | 1 cut(s) | 4082 |
| BstV1I | GCAGC | 6 cut(s) | 466, 1947, 2072, 2793, 2796, 3553 |
| BstV2I | GAAGAC | 1 cut(s) | 919 |
| BstX2I | RGATCY | 3 cut(s) | 376, 1713, 2002 |
| BstYI | RGATCY | 3 cut(s) | 376, 1713, 2002 |
| BsuI | GTATCC | 2 cut(s) | 109, 2840 |
| BsuRI | GGCC | 6 cut(s) | 497, 624, 1082, 1200, 2590, 3141 |
| BtgI | CCRYGG | 1 cut(s) | 2837 |
| BtgZI | GCGATG | 1 cut(s) | 3572 |
| BtsCI | GGATG | 9 cut(s) | 190, 310, 543, 705, 886, 1509, 1757, 3690, 3794 |
| BtsI | GCAGTG | 3 cut(s) | 2338, 2501, 3302 |
| BtsIMutI | CAGTG | 7 cut(s) | 357, 1663, 2338, 2501, 3003, 3302, 3372 |
| Cac8I | GCNNGC | 9 cut(s) | 234, 975, 1277, 2432, 2499, 2640, 2834, 3094, 3990 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2503 |
| CciI | TCATGA | 2 cut(s) | 430, 2695 |
| CfoI | GCGC | 2 cut(s) | 1575, 2628 |
| Cfr13I | GGNCC | 5 cut(s) | 748, 1226, 1699, 2377, 2948 |
| CseI | GACGC | 1 cut(s) | 4071 |
| Csp6I | GTAC | 8 cut(s) | 389, 1313, 1554, 1601, 2264, 3654, 3819, 3969 |
| CviQI | GTAC | 8 cut(s) | 389, 1313, 1554, 1601, 2264, 3654, 3819, 3969 |
| DdeI | CTNAG | 8 cut(s) | 1655, 1746, 1772, 2006, 2408, 3381, 3696, 3921 |
| DraI | TTTAAA | 2 cut(s) | 1384, 1632 |
| DraIII | CACNNNGTG | 1 cut(s) | 3461 |
| EaeI | YGGCCR | 2 cut(s) | 495, 3139 |
| Eam1104I | CTCTTC | 7 cut(s) | 34, 660, 1811, 2704, 2794, 2958, 3717 |
| EarI | CTCTTC | 7 cut(s) | 34, 660, 1811, 2704, 2794, 2958, 3717 |
| Ecl136II | GAGCTC | 2 cut(s) | 2512, 3949 |
| Eco130I | CCWWGG | 1 cut(s) | 547 |
| Eco147I | AGGCCT | 1 cut(s) | 1200 |
| Eco24I | GRGCYC | 3 cut(s) | 2514, 3951, 3984 |
| Eco31I | GGTCTC | 2 cut(s) | 1673, 3579 |
| Eco32I | GATATC | 1 cut(s) | 2693 |
| Eco47I | GGWCC | 5 cut(s) | 748, 1226, 1699, 2377, 2948 |
| Eco47III | AGCGCT | 1 cut(s) | 2627 |
| Eco53kI | GAGCTC | 2 cut(s) | 2512, 3949 |
| Eco57I | CTGAAG | 7 cut(s) | 163, 510, 1502, 1835, 2216, 2619, 3395 |
| Eco72I | CACGTG | 1 cut(s) | 3758 |
| Eco88I | CYCGRG | 1 cut(s) | 3972 |
| Eco91I | GGTNACC | 1 cut(s) | 3851 |
| EcoICRI | GAGCTC | 2 cut(s) | 2512, 3949 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1273 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1699, 2948 |
| EcoO65I | GGTNACC | 1 cut(s) | 3851 |
| EcoRI | GAATTC | 2 cut(s) | 539, 3229 |
| EcoRII | CCWGG | 3 cut(s) | 290, 1564, 3825 |
| EcoRV | GATATC | 1 cut(s) | 2693 |
| EcoT14I | CCWWGG | 1 cut(s) | 547 |
| EcoT22I | ATGCAT | 2 cut(s) | 1509, 3794 |
| EcoT38I | GRGCYC | 3 cut(s) | 2514, 3951, 3984 |
| ErhI | CCWWGG | 1 cut(s) | 547 |
| Esp3I | CGTCTC | 2 cut(s) | 1029, 3283 |
| FaqI | GGGAC | 5 cut(s) | 1156, 1685, 1957, 2981, 3017 |
| FauI | CCCGC | 3 cut(s) | 128, 3042, 3519 |
| FauNDI | CATATG | 1 cut(s) | 85 |
| FbaI | TGATCA | 2 cut(s) | 427, 2572 |
| FblI | GTMKAC | 2 cut(s) | 3145, 3328 |
| Fnu4HI | GCNGC | 6 cut(s) | 480, 1961, 2086, 2782, 2785, 3567 |
| FokI | GGATG | 9 cut(s) | 197, 317, 530, 712, 893, 1516, 1744, 3677, 3801 |
| FriOI | GRGCYC | 3 cut(s) | 2514, 3951, 3984 |
| Fsp4HI | GCNGC | 6 cut(s) | 480, 1961, 2086, 2782, 2785, 3567 |
| FspBI | CTAG | 6 cut(s) | 818, 1982, 2327, 2892, 3099, 3504 |
| GlaI | GCGC | 2 cut(s) | 1574, 2627 |
| GluI | GCNGC | 6 cut(s) | 480, 1961, 2086, 2782, 2785, 3567 |
| GsuI | CTGGAG | 2 cut(s) | 256, 3360 |
| HaeII | RGCGCY | 1 cut(s) | 2629 |
| HaeIII | GGCC | 6 cut(s) | 497, 624, 1082, 1200, 2590, 3141 |
| HapII | CCGG | 1 cut(s) | 1695 |
| HgaI | GACGC | 1 cut(s) | 4071 |
| HhaI | GCGC | 2 cut(s) | 1575, 2628 |
| Hin6I | GCGC | 2 cut(s) | 1573, 2626 |
| HinP1I | GCGC | 2 cut(s) | 1573, 2626 |
| HincII | GTYRAC | 1 cut(s) | 3252 |
| HindII | GTYRAC | 1 cut(s) | 3252 |
| HindIII | AAGCTT | 6 cut(s) | 765, 1669, 1928, 2459, 3990, 4075 |
| HpaII | CCGG | 1 cut(s) | 1695 |
| HphI | GGTGA | 5 cut(s) | 122, 166, 1745, 1919, 3136 |
| HpyCH4IV | ACGT | 6 cut(s) | 147, 2985, 2994, 3652, 3757, 4040 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 1245, 1513, 1570, 2458, 2503, 3563 |
| HpyF3I | CTNAG | 8 cut(s) | 1655, 1746, 1772, 2006, 2408, 3381, 3696, 3921 |
| HpySE526I | ACGT | 6 cut(s) | 147, 2985, 2994, 3652, 3757, 4040 |
| HspAI | GCGC | 2 cut(s) | 1573, 2626 |
| KflI | GGGWCCC | 1 cut(s) | 1699 |
| Ksp22I | TGATCA | 2 cut(s) | 427, 2572 |
| LguI | GCTCTTC | 3 cut(s) | 1811, 2704, 2794 |
| LmnI | GCTCC | 4 cut(s) | 2357, 2517, 2688, 3979 |
| Lsp1109I | GCAGC | 6 cut(s) | 466, 1947, 2072, 2793, 2796, 3553 |
| LweI | GCATC | 6 cut(s) | 1494, 2137, 2163, 3046, 3398, 3779 |
| MaeI | CTAG | 6 cut(s) | 818, 1982, 2327, 2892, 3099, 3504 |
| MaeII | ACGT | 6 cut(s) | 147, 2985, 2994, 3652, 3757, 4040 |
| MaeIII | GTNAC | 8 cut(s) | 809, 1405, 1658, 1765, 2286, 2336, 3851, 4043 |
| MbiI | CCGCTC | 1 cut(s) | 1239 |
| MfeI | CAATTG | 4 cut(s) | 594, 968, 1043, 1212 |
| MflI | RGATCY | 3 cut(s) | 376, 1713, 2002 |
| MhlI | GDGCHC | 9 cut(s) | 1879, 2231, 2514, 2716, 3080, 3662, 3843, 3951, 3984 |
| MlsI | TGGCCA | 1 cut(s) | 497 |
| MluNI | TGGCCA | 1 cut(s) | 497 |
| MlyI | GAGTC | 4 cut(s) | 542, 1655, 1819, 3324 |
| MmeI | TCCRAC | 4 cut(s) | 1103, 1204, 1980, 2827 |
| Mox20I | TGGCCA | 1 cut(s) | 497 |
| Mph1103I | ATGCAT | 2 cut(s) | 1509, 3794 |
| MroXI | GAANNNNTTC | 4 cut(s) | 1130, 1539, 2566, 3408 |
| MscI | TGGCCA | 1 cut(s) | 497 |
| MslI | CAYNNNNRTG | 5 cut(s) | 335, 1593, 3797, 3836, 3846 |
| Msp20I | TGGCCA | 1 cut(s) | 497 |
| MspA1I | CMGCKG | 1 cut(s) | 3116 |
| MspCI | CTTAAG | 2 cut(s) | 97, 2332 |
| MspI | CCGG | 1 cut(s) | 1695 |
| MspR9I | CCNGG | 4 cut(s) | 292, 1566, 1696, 3827 |
| MunI | CAATTG | 4 cut(s) | 594, 968, 1043, 1212 |
| Mva1269I | GAATGC | 3 cut(s) | 1922, 3644, 3684 |
| MvaI | CCWGG | 3 cut(s) | 292, 1566, 3827 |
| MvnI | CGCG | 1 cut(s) | 4082 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 1245, 1513, 1570, 2458, 2503, 3563 |
| NciI | CCSGG | 1 cut(s) | 1696 |
| NdeI | CATATG | 1 cut(s) | 85 |
| NlaIV | GGNNCC | 5 cut(s) | 1228, 1700, 1701, 2684, 3981 |
| NmuCI | GTSAC | 3 cut(s) | 809, 1658, 2336 |
| NsiI | ATGCAT | 2 cut(s) | 1509, 3794 |
| NspI | RCATGY | 2 cut(s) | 1377, 2434 |
| OliI | CACNNNNGTG | 1 cut(s) | 3846 |
| PaeI | GCATGC | 1 cut(s) | 2434 |
| PagI | TCATGA | 2 cut(s) | 430, 2695 |
| PceI | AGGCCT | 1 cut(s) | 1200 |
| PciSI | GCTCTTC | 3 cut(s) | 1811, 2704, 2794 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 2991 |
| PctI | GAATGC | 3 cut(s) | 1922, 3644, 3684 |
| PdmI | GAANNNNTTC | 4 cut(s) | 1130, 1539, 2566, 3408 |
| Pfl23II | CGTACG | 1 cut(s) | 3653 |
| PflFI | GACNNNGTC | 1 cut(s) | 918 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 3005, 3461, 3938 |
| PkrI | GCNGC | 6 cut(s) | 481, 1962, 2087, 2783, 2786, 3568 |
| PleI | GAGTC | 4 cut(s) | 541, 1655, 1818, 3324 |
| PmaCI | CACGTG | 1 cut(s) | 3758 |
| PmlI | CACGTG | 1 cut(s) | 3758 |
| PpsI | GAGTC | 4 cut(s) | 541, 1655, 1818, 3324 |
| Ppu21I | YACGTR | 3 cut(s) | 3653, 3758, 4041 |
| PpuMI | RGGWCCY | 2 cut(s) | 1699, 2948 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2334 |
| PshBI | ATTAAT | 1 cut(s) | 1974 |
| PsiI | TTATAA | 1 cut(s) | 1025 |
| Psp124BI | GAGCTC | 2 cut(s) | 2514, 3951 |
| Psp1406I | AACGTT | 1 cut(s) | 2985 |
| Psp5II | RGGWCCY | 2 cut(s) | 1699, 2948 |
| Psp6I | CCWGG | 3 cut(s) | 290, 1564, 3825 |
| PspCI | CACGTG | 1 cut(s) | 3758 |
| PspEI | GGTNACC | 1 cut(s) | 3851 |
| PspGI | CCWGG | 3 cut(s) | 290, 1564, 3825 |
| PspLI | CGTACG | 1 cut(s) | 3653 |
| PspN4I | GGNNCC | 5 cut(s) | 1228, 1700, 1701, 2684, 3981 |
| PspPI | GGNCC | 5 cut(s) | 748, 1226, 1699, 2377, 2948 |
| PspPPI | RGGWCCY | 2 cut(s) | 1699, 2948 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2503 |
| PsuI | RGATCY | 3 cut(s) | 376, 1713, 2002 |
| PsyI | GACNNNGTC | 1 cut(s) | 918 |
| PvuII | CAGCTG | 1 cut(s) | 3116 |
| RsaI | GTAC | 8 cut(s) | 390, 1314, 1555, 1602, 2265, 3655, 3820, 3970 |
| RsaNI | GTAC | 8 cut(s) | 389, 1313, 1554, 1601, 2264, 3654, 3819, 3969 |
| RseI | CAYNNNNRTG | 5 cut(s) | 335, 1593, 3797, 3836, 3846 |
| SacI | GAGCTC | 2 cut(s) | 2514, 3951 |
| SapI | GCTCTTC | 3 cut(s) | 1811, 2704, 2794 |
| SatI | GCNGC | 6 cut(s) | 480, 1961, 2086, 2782, 2785, 3567 |
| Sau96I | GGNCC | 5 cut(s) | 748, 1226, 1699, 2377, 2948 |
| ScaI | AGTACT | 1 cut(s) | 3970 |
| SchI | GAGTC | 4 cut(s) | 542, 1655, 1819, 3324 |
| ScrFI | CCNGG | 4 cut(s) | 292, 1566, 1696, 3827 |
| SduI | GDGCHC | 9 cut(s) | 1879, 2231, 2514, 2716, 3080, 3662, 3843, 3951, 3984 |
| SfaNI | GCATC | 6 cut(s) | 1494, 2137, 2163, 3046, 3398, 3779 |
| SinI | GGWCC | 5 cut(s) | 748, 1226, 1699, 2377, 2948 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 335, 1593, 3797, 3836, 3846 |
| SmlI | CTYRAG | 7 cut(s) | 97, 197, 1109, 1270, 1709, 1883, 2332 |
| SmoI | CTYRAG | 7 cut(s) | 97, 197, 1109, 1270, 1709, 1883, 2332 |
| SpeI | ACTAGT | 1 cut(s) | 2891 |
| SphI | GCATGC | 1 cut(s) | 2434 |
| SseBI | AGGCCT | 1 cut(s) | 1200 |
| SsiI | CCGC | 8 cut(s) | 121, 751, 1239, 2380, 3035, 3387, 3512, 3580 |
| SspI | AATATT | 2 cut(s) | 1359, 2104 |
| SspMI | CTAG | 6 cut(s) | 818, 1982, 2327, 2892, 3099, 3504 |
| SstI | GAGCTC | 2 cut(s) | 2514, 3951 |
| StuI | AGGCCT | 1 cut(s) | 1200 |
| StyD4I | CCNGG | 4 cut(s) | 290, 1564, 1694, 3825 |
| StyI | CCWWGG | 1 cut(s) | 547 |
| TaiI | ACGT | 6 cut(s) | 150, 2988, 2997, 3655, 3760, 4043 |
| TaqI | TCGA | 4 cut(s) | 1006, 1254, 1434, 3333 |
| TatI | WGTACW | 5 cut(s) | 1312, 1600, 2263, 3818, 3968 |
| TscAI | CASTG | 7 cut(s) | 357, 1663, 2345, 2508, 3010, 3309, 3379 |
| TseFI | GTSAC | 3 cut(s) | 809, 1658, 2336 |
| TseI | GCWGC | 6 cut(s) | 479, 1960, 2085, 2781, 2784, 3566 |
| Tsp45I | GTSAC | 3 cut(s) | 809, 1658, 2336 |
| TspGWI | ACGGA | 3 cut(s) | 406, 617, 3265 |
| TspRI | CASTG | 7 cut(s) | 357, 1663, 2345, 2508, 3010, 3309, 3379 |
| Tth111I | GACNNNGTC | 1 cut(s) | 918 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 3005, 3461, 3938 |
| Vha464I | CTTAAG | 2 cut(s) | 97, 2332 |
| VneI | GTGCAC | 4 cut(s) | 1875, 2227, 3076, 3839 |
| VpaK11BI | GGWCC | 5 cut(s) | 748, 1226, 1699, 2377, 2948 |
| VspI | ATTAAT | 1 cut(s) | 1974 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1273 |
| XapI | RAATTY | 6 cut(s) | 168, 539, 1687, 2528, 3229, 3623 |
| XbaI | TCTAGA | 1 cut(s) | 2326 |
| XceI | RCATGY | 2 cut(s) | 1377, 2434 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 298 |
| XmiI | GTMKAC | 2 cut(s) | 3145, 3328 |
| XmnI | GAANNNNTTC | 4 cut(s) | 1130, 1539, 2566, 3408 |
| XspI | CTAG | 6 cut(s) | 818, 1982, 2327, 2892, 3099, 3504 |
| ZrmI | AGTACT | 1 cut(s) | 3970 |
| Zsp2I | ATGCAT | 2 cut(s) | 1509, 3794 |