TMV resistance protein N-like
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 776 |
| AccB1I | GGYRCC | 2 cut(s) | 1176, 1805 |
| AccI | GTMKAC | 1 cut(s) | 574 |
| AccII | CGCG | 1 cut(s) | 1549 |
| AciI | CCGC | 2 cut(s) | 1267, 1549 |
| AclWI | GGATC | 1 cut(s) | 1496 |
| AcsI | RAATTY | 6 cut(s) | 261, 490, 537, 544, 650, 1353 |
| AcuI | CTGAAG | 1 cut(s) | 215 |
| AdeI | CACNNNGTG | 1 cut(s) | 1493 |
| AfaI | GTAC | 7 cut(s) | 487, 791, 1141, 1219, 1467, 1713, 1718 |
| AfeI | AGCGCT | 1 cut(s) | 1260 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 984, 1109, 1624 |
| AflII | CTTAAG | 1 cut(s) | 803 |
| AflIII | ACRYGT | 1 cut(s) | 1120 |
| AjnI | CCWGG | 4 cut(s) | 40, 301, 1342, 1504 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1394, 1426 |
| AleI | CACNNNNGTG | 1 cut(s) | 1494 |
| AluBI | AGCT | 6 cut(s) | 634, 682, 754, 808, 881, 1738 |
| AluI | AGCT | 6 cut(s) | 634, 682, 754, 808, 881, 1738 |
| Alw21I | GWGCWC | 1 cut(s) | 1459 |
| Alw26I | GTCTC | 2 cut(s) | 523, 1380 |
| AlwI | GGATC | 1 cut(s) | 1496 |
| Aor51HI | AGCGCT | 1 cut(s) | 1260 |
| AoxI | GGCC | 2 cut(s) | 232, 1704 |
| ApaI | GGGCCC | 1 cut(s) | 1708 |
| ApeKI | GCWGC | 3 cut(s) | 784, 808, 1448 |
| ApoI | RAATTY | 6 cut(s) | 261, 490, 537, 544, 650, 1353 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 522, 554 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 15, 893, 1771 |
| AspLEI | GCGC | 4 cut(s) | 51, 1261, 1549, 1609 |
| AspS9I | GGNCC | 4 cut(s) | 233, 1531, 1704, 1705 |
| AsuHPI | GGTGA | 8 cut(s) | 350, 497, 760, 851, 1405, 1580, 1607, 1702 |
| AsuII | TTCGAA | 1 cut(s) | 1656 |
| AvaII | GGWCC | 1 cut(s) | 1531 |
| BaeGI | GKGCMC | 3 cut(s) | 1116, 1181, 1708 |
| BanI | GGYRCC | 2 cut(s) | 1176, 1805 |
| BanII | GRGCYC | 1 cut(s) | 1708 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 188, 220 |
| Bbv12I | GWGCWC | 1 cut(s) | 1459 |
| BbvI | GCAGC | 3 cut(s) | 795, 796, 1435 |
| BccI | CCATC | 6 cut(s) | 517, 1174, 1189, 1294, 1489, 1658 |
| BceAI | ACGGC | 1 cut(s) | 772 |
| BciT130I | CCWGG | 4 cut(s) | 42, 303, 1344, 1506 |
| BciVI | GTATCC | 1 cut(s) | 291 |
| BclI | TGATCA | 2 cut(s) | 355, 1740 |
| BcoDI | GTCTC | 2 cut(s) | 523, 1380 |
| BfaI | CTAG | 1 cut(s) | 875 |
| BfmI | CTRYAG | 2 cut(s) | 809, 1863 |
| BfoI | RGCGCY | 1 cut(s) | 1262 |
| BfrI | CTTAAG | 1 cut(s) | 803 |
| BfuI | GTATCC | 1 cut(s) | 291 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 46, 1200 |
| BglII | AGATCT | 1 cut(s) | 290 |
| BisI | GCNGC | 3 cut(s) | 785, 809, 1449 |
| BlsI | GCNGC | 3 cut(s) | 786, 810, 1450 |
| Bme1390I | CCNGG | 4 cut(s) | 42, 303, 1344, 1506 |
| Bme18I | GGWCC | 1 cut(s) | 1531 |
| BmgT120I | GGNCC | 4 cut(s) | 233, 1531, 1704, 1705 |
| BmiI | GGNNCC | 8 cut(s) | 235, 1178, 1271, 1532, 1705, 1706, 1807, 1843 |
| BmrFI | CCNGG | 4 cut(s) | 42, 303, 1344, 1506 |
| BmsI | GCATC | 6 cut(s) | 614, 1212, 1225, 1405, 1622, 1670 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 211, 243, 1268, 1300, 1391, 1423 |
| BpmI | CTGGAG | 1 cut(s) | 1643 |
| Bpu14I | TTCGAA | 1 cut(s) | 1656 |
| BpuEI | CTTGAG | 4 cut(s) | 509, 1234, 1295, 1455 |
| Bsa29I | ATCGAT | 2 cut(s) | 402, 1662 |
| BsaAI | YACGTR | 1 cut(s) | 386 |
| BsaBI | GATNNNNATC | 1 cut(s) | 162 |
| BsaJI | CCNNGG | 2 cut(s) | 1492, 1809 |
| BsaWI | WCCGGW | 2 cut(s) | 313, 1329 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1377, 1407, 1826, 1856 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 984, 1109, 1624 |
| Bse1I | ACTGG | 2 cut(s) | 1103, 1204 |
| Bse3DI | GCAATG | 2 cut(s) | 513, 518 |
| Bse8I | GATNNNNATC | 1 cut(s) | 162 |
| BseBI | CCWGG | 4 cut(s) | 42, 303, 1344, 1506 |
| BseCI | ATCGAT | 2 cut(s) | 402, 1662 |
| BseDI | CCNNGG | 2 cut(s) | 1492, 1809 |
| BseGI | GGATG | 6 cut(s) | 11, 322, 509, 629, 1420, 1798 |
| BseJI | GATNNNNATC | 1 cut(s) | 162 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 984, 1109, 1624 |
| BseMI | GCAATG | 2 cut(s) | 513, 518 |
| BseMII | CTCAG | 2 cut(s) | 1009, 1389 |
| BseNI | ACTGG | 2 cut(s) | 1103, 1204 |
| BseSI | GKGCMC | 3 cut(s) | 1116, 1181, 1708 |
| BseXI | GCAGC | 3 cut(s) | 795, 796, 1435 |
| BsgI | GTGCAG | 1 cut(s) | 1470 |
| Bsh1236I | CGCG | 1 cut(s) | 1549 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1224 |
| BshFI | GGCC | 2 cut(s) | 234, 1706 |
| BshNI | GGYRCC | 2 cut(s) | 1176, 1805 |
| BshVI | ATCGAT | 2 cut(s) | 402, 1662 |
| BsiEI | CGRYCG | 1 cut(s) | 1224 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1459 |
| BsiSI | CCGG | 2 cut(s) | 314, 1330 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 984, 1109, 1624 |
| BsmAI | GTCTC | 2 cut(s) | 523, 1380 |
| BsmI | GAATGC | 1 cut(s) | 1029 |
| BsnI | GGCC | 2 cut(s) | 234, 1706 |
| Bsp119I | TTCGAA | 1 cut(s) | 1656 |
| Bsp120I | GGGCCC | 1 cut(s) | 1704 |
| Bsp1286I | GDGCHC | 4 cut(s) | 1116, 1181, 1459, 1708 |
| Bsp143I | GATC | 6 cut(s) | 290, 355, 403, 1501, 1585, 1740 |
| Bsp19I | CCATGG | 1 cut(s) | 1809 |
| BspACI | CCGC | 2 cut(s) | 1267, 1549 |
| BspANI | GGCC | 2 cut(s) | 234, 1706 |
| BspCNI | CTCAG | 2 cut(s) | 1008, 1390 |
| BspDI | ATCGAT | 2 cut(s) | 402, 1662 |
| BspFNI | CGCG | 1 cut(s) | 1549 |
| BspLI | GGNNCC | 8 cut(s) | 235, 1178, 1271, 1532, 1705, 1706, 1807, 1843 |
| BspMAI | CTGCAG | 2 cut(s) | 813, 1867 |
| BspPI | GGATC | 1 cut(s) | 1496 |
| BspQI | GCTCTTC | 2 cut(s) | 30, 1728 |
| BspT104I | TTCGAA | 1 cut(s) | 1656 |
| BspT107I | GGYRCC | 2 cut(s) | 1176, 1805 |
| BspTI | CTTAAG | 1 cut(s) | 803 |
| BsrDI | GCAATG | 2 cut(s) | 513, 518 |
| BsrI | ACTGG | 2 cut(s) | 1103, 1204 |
| BssECI | CCNNGG | 2 cut(s) | 1492, 1809 |
| BssMI | GATC | 6 cut(s) | 290, 355, 403, 1501, 1585, 1740 |
| BssT1I | CCWWGG | 1 cut(s) | 1809 |
| Bst2UI | CCWGG | 4 cut(s) | 42, 303, 1344, 1506 |
| Bst4CI | ACNGT | 6 cut(s) | 929, 1222, 1493, 1619, 1716, 1838 |
| Bst6I | CTCTTC | 3 cut(s) | 30, 144, 1728 |
| BstAFI | CTTAAG | 1 cut(s) | 803 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1209 |
| BstBAI | YACGTR | 1 cut(s) | 386 |
| BstBI | TTCGAA | 1 cut(s) | 1656 |
| BstC8I | GCNNGC | 2 cut(s) | 1027, 1128 |
| BstDEI | CTNAG | 6 cut(s) | 257, 332, 407, 979, 995, 1398 |
| BstDSI | CCRYGG | 2 cut(s) | 1492, 1809 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 982 |
| BstF5I | GGATG | 6 cut(s) | 11, 322, 509, 629, 1420, 1798 |
| BstFNI | CGCG | 1 cut(s) | 1549 |
| BstH2I | RGCGCY | 1 cut(s) | 1262 |
| BstHHI | GCGC | 4 cut(s) | 51, 1261, 1549, 1609 |
| BstKTI | GATC | 6 cut(s) | 293, 358, 406, 1504, 1588, 1743 |
| BstMAI | GTCTC | 2 cut(s) | 523, 1380 |
| BstMBI | GATC | 6 cut(s) | 290, 355, 403, 1501, 1585, 1740 |
| BstMCI | CGRYCG | 1 cut(s) | 1224 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 46, 1200, 1209, 1454 |
| BstNI | CCWGG | 4 cut(s) | 42, 303, 1344, 1506 |
| BstNSI | RCATGY | 2 cut(s) | 1124, 1455 |
| BstSCI | CCNGG | 4 cut(s) | 40, 301, 1342, 1504 |
| BstSFI | CTRYAG | 2 cut(s) | 809, 1863 |
| BstSLI | GKGCMC | 3 cut(s) | 1116, 1181, 1708 |
| BstSNI | TACGTA | 1 cut(s) | 386 |
| BstUI | CGCG | 1 cut(s) | 1549 |
| BstV1I | GCAGC | 3 cut(s) | 795, 796, 1435 |
| BstX2I | RGATCY | 2 cut(s) | 290, 1501 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1173 |
| BstYI | RGATCY | 2 cut(s) | 290, 1501 |
| Bsu15I | ATCGAT | 2 cut(s) | 402, 1662 |
| BsuI | GTATCC | 1 cut(s) | 291 |
| BsuRI | GGCC | 2 cut(s) | 234, 1706 |
| BsuTUI | ATCGAT | 2 cut(s) | 402, 1662 |
| BtgI | CCRYGG | 2 cut(s) | 1492, 1809 |
| BtsCI | GGATG | 6 cut(s) | 11, 322, 509, 629, 1420, 1798 |
| BtsIMutI | CAGTG | 1 cut(s) | 1197 |
| Cac8I | GCNNGC | 2 cut(s) | 1027, 1128 |
| CfoI | GCGC | 4 cut(s) | 51, 1261, 1549, 1609 |
| Cfr13I | GGNCC | 4 cut(s) | 233, 1531, 1704, 1705 |
| ClaI | ATCGAT | 2 cut(s) | 402, 1662 |
| CsiI | ACCWGGT | 1 cut(s) | 301 |
| Csp6I | GTAC | 7 cut(s) | 486, 790, 1140, 1218, 1466, 1712, 1717 |
| CviAII | CATG | 8 cut(s) | 83, 820, 1121, 1452, 1637, 1684, 1729, 1810 |
| CviQI | GTAC | 7 cut(s) | 486, 790, 1140, 1218, 1466, 1712, 1717 |
| DdeI | CTNAG | 6 cut(s) | 257, 332, 407, 979, 995, 1398 |
| DpnI | GATC | 6 cut(s) | 292, 357, 405, 1503, 1587, 1742 |
| DpnII | GATC | 6 cut(s) | 290, 355, 403, 1501, 1585, 1740 |
| DraIII | CACNNNGTG | 1 cut(s) | 1493 |
| Eam1104I | CTCTTC | 3 cut(s) | 30, 144, 1728 |
| EarI | CTCTTC | 3 cut(s) | 30, 144, 1728 |
| Eco105I | TACGTA | 1 cut(s) | 386 |
| Eco130I | CCWWGG | 1 cut(s) | 1809 |
| Eco24I | GRGCYC | 1 cut(s) | 1708 |
| Eco32I | GATATC | 1 cut(s) | 242 |
| Eco47I | GGWCC | 1 cut(s) | 1531 |
| Eco47III | AGCGCT | 1 cut(s) | 1260 |
| Eco57I | CTGAAG | 1 cut(s) | 215 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 982 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1531, 1704 |
| EcoRI | GAATTC | 1 cut(s) | 261 |
| EcoRII | CCWGG | 4 cut(s) | 40, 301, 1342, 1504 |
| EcoRV | GATATC | 1 cut(s) | 242 |
| EcoT14I | CCWWGG | 1 cut(s) | 1809 |
| EcoT22I | ATGCAT | 2 cut(s) | 189, 1685 |
| EcoT38I | GRGCYC | 1 cut(s) | 1708 |
| ErhI | CCWWGG | 1 cut(s) | 1809 |
| FaeI | CATG | 8 cut(s) | 86, 823, 1124, 1455, 1640, 1687, 1732, 1813 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1100, 1132, 1759, 1791 |
| FatI | CATG | 8 cut(s) | 82, 819, 1120, 1451, 1636, 1683, 1728, 1809 |
| FauI | CCCGC | 1 cut(s) | 1542 |
| FbaI | TGATCA | 2 cut(s) | 355, 1740 |
| FblI | GTMKAC | 1 cut(s) | 574 |
| Fnu4HI | GCNGC | 3 cut(s) | 785, 809, 1449 |
| FokI | GGATG | 6 cut(s) | 18, 329, 496, 636, 1427, 1805 |
| FriOI | GRGCYC | 1 cut(s) | 1708 |
| Fsp4HI | GCNGC | 3 cut(s) | 785, 809, 1449 |
| FspBI | CTAG | 1 cut(s) | 875 |
| GlaI | GCGC | 4 cut(s) | 50, 1260, 1548, 1608 |
| GluI | GCNGC | 3 cut(s) | 785, 809, 1449 |
| GsuI | CTGGAG | 1 cut(s) | 1643 |
| HaeII | RGCGCY | 1 cut(s) | 1262 |
| HaeIII | GGCC | 2 cut(s) | 234, 1706 |
| HapII | CCGG | 2 cut(s) | 314, 1330 |
| HhaI | GCGC | 4 cut(s) | 51, 1261, 1549, 1609 |
| Hin1II | CATG | 8 cut(s) | 86, 823, 1124, 1455, 1640, 1687, 1732, 1813 |
| Hin6I | GCGC | 4 cut(s) | 49, 1259, 1547, 1607 |
| HinP1I | GCGC | 4 cut(s) | 49, 1259, 1547, 1607 |
| HindIII | AAGCTT | 1 cut(s) | 752 |
| HpaII | CCGG | 2 cut(s) | 314, 1330 |
| HphI | GGTGA | 8 cut(s) | 350, 497, 760, 851, 1405, 1580, 1607, 1702 |
| Hpy166II | GTNNAC | 2 cut(s) | 575, 1712 |
| Hpy188I | TCNGA | 8 cut(s) | 267, 921, 991, 998, 1171, 1186, 1585, 1846 |
| Hpy8I | GTNNAC | 2 cut(s) | 575, 1712 |
| Hpy99I | CGWCG | 1 cut(s) | 1850 |
| HpyAV | CCTTC | 9 cut(s) | 113, 184, 294, 473, 726, 935, 1028, 1681, 1796 |
| HpyCH4III | ACNGT | 6 cut(s) | 929, 1222, 1493, 1619, 1716, 1838 |
| HpyCH4IV | ACGT | 2 cut(s) | 385, 1646 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 46, 1200, 1209, 1454 |
| HpyF3I | CTNAG | 6 cut(s) | 257, 332, 407, 979, 995, 1398 |
| HpySE526I | ACGT | 2 cut(s) | 385, 1646 |
| Hsp92II | CATG | 8 cut(s) | 86, 823, 1124, 1455, 1640, 1687, 1732, 1813 |
| HspAI | GCGC | 4 cut(s) | 49, 1259, 1547, 1607 |
| Ksp22I | TGATCA | 2 cut(s) | 355, 1740 |
| Kzo9I | GATC | 6 cut(s) | 290, 355, 403, 1501, 1585, 1740 |
| LguI | GCTCTTC | 2 cut(s) | 30, 1728 |
| LmnI | GCTCC | 1 cut(s) | 1847 |
| Lsp1109I | GCAGC | 3 cut(s) | 795, 796, 1435 |
| LweI | GCATC | 6 cut(s) | 614, 1212, 1225, 1405, 1622, 1670 |
| MabI | ACCWGGT | 1 cut(s) | 301 |
| MaeI | CTAG | 1 cut(s) | 875 |
| MaeII | ACGT | 2 cut(s) | 385, 1646 |
| MaeIII | GTNAC | 4 cut(s) | 129, 410, 1393, 1642 |
| MalI | GATC | 6 cut(s) | 292, 357, 405, 1503, 1587, 1742 |
| MboI | GATC | 6 cut(s) | 290, 355, 403, 1501, 1585, 1740 |
| MboII | GAAGA | 5 cut(s) | 47, 161, 236, 1705, 1745 |
| MfeI | CAATTG | 3 cut(s) | 723, 1088, 1135 |
| MflI | RGATCY | 2 cut(s) | 290, 1501 |
| MhlI | GDGCHC | 4 cut(s) | 1116, 1181, 1459, 1708 |
| MlyI | GAGTC | 7 cut(s) | 35, 525, 580, 751, 862, 1382, 1579 |
| MmeI | TCCRAC | 2 cut(s) | 969, 1869 |
| Mph1103I | ATGCAT | 2 cut(s) | 189, 1685 |
| MroXI | GAANNNNTTC | 3 cut(s) | 15, 893, 1771 |
| MseI | TTAA | 5 cut(s) | 498, 567, 804, 914, 1815 |
| MslI | CAYNNNNRTG | 4 cut(s) | 1059, 1119, 1494, 1688 |
| MspCI | CTTAAG | 1 cut(s) | 803 |
| MspI | CCGG | 2 cut(s) | 314, 1330 |
| MspR9I | CCNGG | 4 cut(s) | 42, 303, 1344, 1506 |
| MunI | CAATTG | 3 cut(s) | 723, 1088, 1135 |
| Mva1269I | GAATGC | 1 cut(s) | 1029 |
| MvaI | CCWGG | 4 cut(s) | 42, 303, 1344, 1506 |
| MvnI | CGCG | 1 cut(s) | 1549 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 46, 1200, 1209, 1454 |
| NcoI | CCATGG | 1 cut(s) | 1809 |
| NdeII | GATC | 6 cut(s) | 290, 355, 403, 1501, 1585, 1740 |
| NlaIII | CATG | 8 cut(s) | 86, 823, 1124, 1455, 1640, 1687, 1732, 1813 |
| NlaIV | GGNNCC | 8 cut(s) | 235, 1178, 1271, 1532, 1705, 1706, 1807, 1843 |
| NmuCI | GTSAC | 2 cut(s) | 410, 1393 |
| NsiI | ATGCAT | 2 cut(s) | 189, 1685 |
| NspI | RCATGY | 2 cut(s) | 1124, 1455 |
| NspV | TTCGAA | 1 cut(s) | 1656 |
| OliI | CACNNNNGTG | 1 cut(s) | 1494 |
| PciI | ACATGT | 1 cut(s) | 1120 |
| PciSI | GCTCTTC | 2 cut(s) | 30, 1728 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1842 |
| PctI | GAATGC | 1 cut(s) | 1029 |
| PdmI | GAANNNNTTC | 3 cut(s) | 15, 893, 1771 |
| PfeI | GAWTC | 8 cut(s) | 163, 502, 643, 814, 868, 949, 1538, 1612 |
| PfoI | TCCNGGA | 1 cut(s) | 1342 |
| PkrI | GCNGC | 3 cut(s) | 786, 810, 1450 |
| PleI | GAGTC | 7 cut(s) | 34, 525, 579, 750, 861, 1382, 1578 |
| PpsI | GAGTC | 7 cut(s) | 34, 525, 579, 750, 861, 1382, 1578 |
| Ppu21I | YACGTR | 1 cut(s) | 386 |
| PpuMI | RGGWCCY | 1 cut(s) | 1531 |
| PscI | ACATGT | 1 cut(s) | 1120 |
| PsiI | TTATAA | 1 cut(s) | 776 |
| Psp5II | RGGWCCY | 1 cut(s) | 1531 |
| Psp6I | CCWGG | 4 cut(s) | 40, 301, 1342, 1504 |
| PspGI | CCWGG | 4 cut(s) | 40, 301, 1342, 1504 |
| PspN4I | GGNNCC | 8 cut(s) | 235, 1178, 1271, 1532, 1705, 1706, 1807, 1843 |
| PspOMI | GGGCCC | 1 cut(s) | 1704 |
| PspPI | GGNCC | 4 cut(s) | 233, 1531, 1704, 1705 |
| PspPPI | RGGWCCY | 1 cut(s) | 1531 |
| PstI | CTGCAG | 2 cut(s) | 813, 1867 |
| PsuI | RGATCY | 2 cut(s) | 290, 1501 |
| RsaI | GTAC | 7 cut(s) | 487, 791, 1141, 1219, 1467, 1713, 1718 |
| RsaNI | GTAC | 7 cut(s) | 486, 790, 1140, 1218, 1466, 1712, 1717 |
| RseI | CAYNNNNRTG | 4 cut(s) | 1059, 1119, 1494, 1688 |
| SapI | GCTCTTC | 2 cut(s) | 30, 1728 |
| SaqAI | TTAA | 5 cut(s) | 498, 567, 804, 914, 1815 |
| SatI | GCNGC | 3 cut(s) | 785, 809, 1449 |
| Sau3AI | GATC | 6 cut(s) | 290, 355, 403, 1501, 1585, 1740 |
| Sau96I | GGNCC | 4 cut(s) | 233, 1531, 1704, 1705 |
| SchI | GAGTC | 7 cut(s) | 35, 525, 580, 751, 862, 1382, 1579 |
| ScrFI | CCNGG | 4 cut(s) | 42, 303, 1344, 1506 |
| SduI | GDGCHC | 4 cut(s) | 1116, 1181, 1459, 1708 |
| SexAI | ACCWGGT | 1 cut(s) | 301 |
| SfaNI | GCATC | 6 cut(s) | 614, 1212, 1225, 1405, 1622, 1670 |
| SfcI | CTRYAG | 2 cut(s) | 809, 1863 |
| SfuI | TTCGAA | 1 cut(s) | 1656 |
| SinI | GGWCC | 1 cut(s) | 1531 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 1059, 1119, 1494, 1688 |
| SmlI | CTYRAG | 5 cut(s) | 524, 803, 1213, 1274, 1470 |
| SmoI | CTYRAG | 5 cut(s) | 524, 803, 1213, 1274, 1470 |
| SnaBI | TACGTA | 1 cut(s) | 386 |
| SsiI | CCGC | 2 cut(s) | 1267, 1549 |
| SspI | AATATT | 2 cut(s) | 352, 1856 |
| SspMI | CTAG | 1 cut(s) | 875 |
| StyD4I | CCNGG | 4 cut(s) | 40, 301, 1342, 1504 |
| StyI | CCWWGG | 1 cut(s) | 1809 |
| TaaI | ACNGT | 6 cut(s) | 929, 1222, 1493, 1619, 1716, 1838 |
| TaiI | ACGT | 2 cut(s) | 388, 1649 |
| TaqI | TCGA | 5 cut(s) | 402, 1563, 1650, 1656, 1662 |
| TatI | WGTACW | 2 cut(s) | 1139, 1711 |
| TfiI | GAWTC | 8 cut(s) | 163, 502, 643, 814, 868, 949, 1538, 1612 |
| Tru1I | TTAA | 5 cut(s) | 498, 567, 804, 914, 1815 |
| Tru9I | TTAA | 5 cut(s) | 498, 567, 804, 914, 1815 |
| TscAI | CASTG | 1 cut(s) | 1204 |
| TseFI | GTSAC | 2 cut(s) | 410, 1393 |
| TseI | GCWGC | 3 cut(s) | 784, 808, 1448 |
| Tsp45I | GTSAC | 2 cut(s) | 410, 1393 |
| TspGWI | ACGGA | 1 cut(s) | 1805 |
| TspRI | CASTG | 1 cut(s) | 1204 |
| Vha464I | CTTAAG | 1 cut(s) | 803 |
| VpaK11BI | GGWCC | 1 cut(s) | 1531 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 982 |
| XapI | RAATTY | 6 cut(s) | 261, 490, 537, 544, 650, 1353 |
| XceI | RCATGY | 2 cut(s) | 1124, 1455 |
| XmiI | GTMKAC | 1 cut(s) | 574 |
| XmnI | GAANNNNTTC | 3 cut(s) | 15, 893, 1771 |
| XspI | CTAG | 1 cut(s) | 875 |
| Zsp2I | ATGCAT | 2 cut(s) | 189, 1685 |