TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 17 - 187 | 1.5e-49 | TIR domain |
| TIR_2 | PF13676 | 20 - 116 | 3.6e-16 | TIR domain |
| NB-ARC | PF00931 | 200 - 369 | 8.4e-24 | NB-ARC domain |
| NACHT | PF05729 | 221 - 362 | 5.2e-06 | NACHT domain |
| WHD_ROQ1 | PF23282 | 437 - 486 | 7.2e-06 | Disease resistance protein Roq1-like, winged-helix domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 20 |
| AccI | GTMKAC | 1 cut(s) | 1474 |
| AciI | CCGC | 1 cut(s) | 771 |
| AclWI | GGATC | 2 cut(s) | 149, 930 |
| AcoI | YGGCCR | 1 cut(s) | 459 |
| AcsI | RAATTY | 3 cut(s) | 315, 1228, 1323 |
| AcuI | CTGAAG | 4 cut(s) | 55, 399, 1061, 1137 |
| AdeI | CACNNNGTG | 1 cut(s) | 1028 |
| AfaI | GTAC | 4 cut(s) | 53, 531, 1205, 1255 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 21 |
| AflIII | ACRYGT | 2 cut(s) | 57, 1340 |
| AhlI | ACTAGT | 1 cut(s) | 703 |
| AjiI | CACGTC | 1 cut(s) | 58 |
| AjnI | CCWGG | 1 cut(s) | 215 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 390, 422, 1220, 1252 |
| Alw21I | GWGCWC | 1 cut(s) | 14 |
| Alw26I | GTCTC | 4 cut(s) | 349, 510, 560, 1172 |
| AlwI | GGATC | 2 cut(s) | 149, 930 |
| Ama87I | CYCGRG | 1 cut(s) | 929 |
| AoxI | GGCC | 1 cut(s) | 459 |
| ApoI | RAATTY | 3 cut(s) | 315, 1228, 1323 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 834, 1074 |
| AspS9I | GGNCC | 1 cut(s) | 570 |
| AvaI | CYCGRG | 1 cut(s) | 929 |
| AvaII | GGWCC | 1 cut(s) | 570 |
| BalI | TGGCCA | 1 cut(s) | 461 |
| BbsI | GAAGAC | 1 cut(s) | 87 |
| Bbv12I | GWGCWC | 1 cut(s) | 14 |
| BccI | CCATC | 3 cut(s) | 664, 1292, 1306 |
| BciT130I | CCWGG | 1 cut(s) | 217 |
| BciVI | GTATCC | 1 cut(s) | 589 |
| BcoDI | GTCTC | 4 cut(s) | 349, 510, 560, 1172 |
| BcuI | ACTAGT | 1 cut(s) | 703 |
| BfmI | CTRYAG | 1 cut(s) | 27 |
| BfuAI | ACCTGC | 1 cut(s) | 20 |
| BfuI | GTATCC | 1 cut(s) | 589 |
| BglII | AGATCT | 1 cut(s) | 285 |
| BmcAI | AGTACT | 1 cut(s) | 1255 |
| Bme1390I | CCNGG | 1 cut(s) | 217 |
| Bme18I | GGWCC | 1 cut(s) | 570 |
| BmeT110I | CYCGRG | 1 cut(s) | 929 |
| BmgBI | CACGTC | 1 cut(s) | 58 |
| BmgT120I | GGNCC | 1 cut(s) | 570 |
| BmiI | GGNNCC | 2 cut(s) | 342, 571 |
| BmrFI | CCNGG | 1 cut(s) | 217 |
| BmrI | ACTGGG | 1 cut(s) | 30 |
| BmsI | GCATC | 4 cut(s) | 433, 556, 750, 1210 |
| BmuI | ACTGGG | 1 cut(s) | 30 |
| BpiI | GAAGAC | 1 cut(s) | 87 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 704, 736 |
| BpmI | CTGGAG | 4 cut(s) | 171, 556, 626, 1182 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1174 |
| BsaBI | GATNNNNATC | 1 cut(s) | 921 |
| BsaI | GGTCTC | 1 cut(s) | 1172 |
| BsaJI | CCNNGG | 2 cut(s) | 297, 778 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 169, 199 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 21 |
| Bse1I | ACTGG | 4 cut(s) | 25, 942, 968, 1365 |
| Bse8I | GATNNNNATC | 1 cut(s) | 921 |
| BseBI | CCWGG | 1 cut(s) | 217 |
| BseDI | CCNNGG | 2 cut(s) | 297, 778 |
| BseGI | GGATG | 4 cut(s) | 157, 448, 547, 675 |
| BseJI | GATNNNNATC | 1 cut(s) | 921 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 21 |
| BseMII | CTCAG | 2 cut(s) | 360, 588 |
| BseNI | ACTGG | 4 cut(s) | 25, 942, 968, 1365 |
| BseRI | GAGGAG | 2 cut(s) | 185, 317 |
| BseYI | CCCAGC | 1 cut(s) | 470 |
| Bsh1285I | CGRYCG | 1 cut(s) | 228 |
| BshFI | GGCC | 1 cut(s) | 461 |
| BsiEI | CGRYCG | 1 cut(s) | 228 |
| BsiHKAI | GWGCWC | 1 cut(s) | 14 |
| BsiHKCI | CYCGRG | 1 cut(s) | 929 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 21 |
| BsmAI | GTCTC | 4 cut(s) | 349, 510, 560, 1172 |
| BsnI | GGCC | 1 cut(s) | 461 |
| Bso31I | GGTCTC | 1 cut(s) | 1172 |
| BsoBI | CYCGRG | 1 cut(s) | 929 |
| Bsp1286I | GDGCHC | 1 cut(s) | 14 |
| Bsp143I | GATC | 5 cut(s) | 154, 225, 285, 922, 1003 |
| Bsp19I | CCATGG | 1 cut(s) | 297 |
| BspACI | CCGC | 1 cut(s) | 771 |
| BspANI | GGCC | 1 cut(s) | 461 |
| BspCNI | CTCAG | 2 cut(s) | 359, 587 |
| BspLI | GGNNCC | 2 cut(s) | 342, 571 |
| BspMAI | CTGCAG | 1 cut(s) | 31 |
| BspMI | ACCTGC | 1 cut(s) | 20 |
| BspPI | GGATC | 2 cut(s) | 149, 930 |
| BspQI | GCTCTTC | 1 cut(s) | 1080 |
| BspTNI | GGTCTC | 1 cut(s) | 1172 |
| BsrI | ACTGG | 4 cut(s) | 25, 942, 968, 1365 |
| BssECI | CCNNGG | 2 cut(s) | 297, 778 |
| BssMI | GATC | 5 cut(s) | 154, 225, 285, 922, 1003 |
| BssNAI | GTATAC | 1 cut(s) | 1475 |
| BssT1I | CCWWGG | 1 cut(s) | 297 |
| Bst1107I | GTATAC | 1 cut(s) | 1475 |
| Bst2UI | CCWGG | 1 cut(s) | 217 |
| Bst4CI | ACNGT | 3 cut(s) | 279, 562, 782 |
| Bst6I | CTCTTC | 2 cut(s) | 393, 1080 |
| BstC8I | GCNNGC | 1 cut(s) | 269 |
| BstDEI | CTNAG | 4 cut(s) | 346, 574, 600, 1174 |
| BstDSI | CCRYGG | 2 cut(s) | 297, 778 |
| BstF5I | GGATG | 4 cut(s) | 157, 448, 547, 675 |
| BstKTI | GATC | 5 cut(s) | 157, 228, 288, 925, 1006 |
| BstMAI | GTCTC | 4 cut(s) | 349, 510, 560, 1172 |
| BstMBI | GATC | 5 cut(s) | 154, 225, 285, 922, 1003 |
| BstMCI | CGRYCG | 1 cut(s) | 228 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 35, 75, 467 |
| BstNI | CCWGG | 1 cut(s) | 217 |
| BstNSI | RCATGY | 3 cut(s) | 530, 1013, 1344 |
| BstSCI | CCNGG | 1 cut(s) | 215 |
| BstSFI | CTRYAG | 1 cut(s) | 27 |
| BstV2I | GAAGAC | 1 cut(s) | 87 |
| BstX2I | RGATCY | 1 cut(s) | 285 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1224 |
| BstYI | RGATCY | 1 cut(s) | 285 |
| BstZ17I | GTATAC | 1 cut(s) | 1475 |
| BsuI | GTATCC | 1 cut(s) | 589 |
| BsuRI | GGCC | 1 cut(s) | 461 |
| BtgI | CCRYGG | 2 cut(s) | 297, 778 |
| BtrI | CACGTC | 1 cut(s) | 58 |
| BtsCI | GGATG | 4 cut(s) | 157, 448, 547, 675 |
| BtsI | GCAGTG | 2 cut(s) | 131, 198 |
| BtsIMutI | CAGTG | 3 cut(s) | 131, 198, 558 |
| BveI | ACCTGC | 1 cut(s) | 20 |
| Cac8I | GCNNGC | 1 cut(s) | 269 |
| Cfr13I | GGNCC | 1 cut(s) | 570 |
| Csp6I | GTAC | 4 cut(s) | 52, 530, 1204, 1254 |
| CviAII | CATG | 7 cut(s) | 298, 395, 527, 1010, 1153, 1224, 1341 |
| CviQI | GTAC | 4 cut(s) | 52, 530, 1204, 1254 |
| DdeI | CTNAG | 4 cut(s) | 346, 574, 600, 1174 |
| DpnI | GATC | 5 cut(s) | 156, 227, 287, 924, 1005 |
| DpnII | GATC | 5 cut(s) | 154, 225, 285, 922, 1003 |
| DraIII | CACNNNGTG | 1 cut(s) | 1028 |
| EaeI | YGGCCR | 1 cut(s) | 459 |
| Eam1104I | CTCTTC | 2 cut(s) | 393, 1080 |
| EarI | CTCTTC | 2 cut(s) | 393, 1080 |
| Eco130I | CCWWGG | 1 cut(s) | 297 |
| Eco31I | GGTCTC | 1 cut(s) | 1172 |
| Eco47I | GGWCC | 1 cut(s) | 570 |
| Eco57I | CTGAAG | 4 cut(s) | 55, 399, 1061, 1137 |
| Eco88I | CYCGRG | 1 cut(s) | 929 |
| EcoO109I | RGGNCCY | 1 cut(s) | 570 |
| EcoRI | GAATTC | 2 cut(s) | 315, 1228 |
| EcoRII | CCWGG | 1 cut(s) | 215 |
| EcoT14I | CCWWGG | 1 cut(s) | 297 |
| EcoT22I | ATGCAT | 1 cut(s) | 1225 |
| ErhI | CCWWGG | 1 cut(s) | 297 |
| FaeI | CATG | 7 cut(s) | 301, 398, 530, 1013, 1156, 1227, 1344 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 885, 917 |
| FatI | CATG | 7 cut(s) | 297, 394, 526, 1009, 1152, 1223, 1340 |
| FblI | GTMKAC | 1 cut(s) | 1474 |
| FokI | GGATG | 4 cut(s) | 164, 455, 534, 682 |
| GsaI | CCCAGC | 1 cut(s) | 474 |
| GsuI | CTGGAG | 4 cut(s) | 171, 556, 626, 1182 |
| HaeIII | GGCC | 1 cut(s) | 461 |
| Hin1II | CATG | 7 cut(s) | 301, 398, 530, 1013, 1156, 1227, 1344 |
| HindIII | AAGCTT | 2 cut(s) | 370, 1095 |
| HinfI | GANTC | 7 cut(s) | 135, 293, 805, 861, 984, 1213, 1302 |
| Hpy166II | GTNNAC | 1 cut(s) | 1475 |
| Hpy188I | TCNGA | 6 cut(s) | 74, 349, 515, 577, 761, 1396 |
| Hpy188III | TCNNGA | 8 cut(s) | 139, 188, 535, 820, 911, 975, 1217, 1331 |
| Hpy8I | GTNNAC | 1 cut(s) | 1475 |
| Hpy99I | CGWCG | 1 cut(s) | 59 |
| HpyAV | CCTTC | 3 cut(s) | 407, 817, 1045 |
| HpyCH4III | ACNGT | 3 cut(s) | 279, 562, 782 |
| HpyCH4IV | ACGT | 3 cut(s) | 57, 1357, 1398 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 35, 75, 467 |
| HpyF3I | CTNAG | 4 cut(s) | 346, 574, 600, 1174 |
| HpySE526I | ACGT | 3 cut(s) | 57, 1357, 1398 |
| Hsp92II | CATG | 7 cut(s) | 301, 398, 530, 1013, 1156, 1227, 1344 |
| Kzo9I | GATC | 5 cut(s) | 154, 225, 285, 922, 1003 |
| LguI | GCTCTTC | 1 cut(s) | 1080 |
| LmnI | GCTCC | 1 cut(s) | 537 |
| LweI | GCATC | 4 cut(s) | 433, 556, 750, 1210 |
| MaeII | ACGT | 3 cut(s) | 57, 1357, 1398 |
| MaeIII | GTNAC | 1 cut(s) | 1452 |
| MalI | GATC | 5 cut(s) | 156, 227, 287, 924, 1005 |
| MboI | GATC | 5 cut(s) | 154, 225, 285, 922, 1003 |
| MflI | RGATCY | 1 cut(s) | 285 |
| MhlI | GDGCHC | 1 cut(s) | 14 |
| MlsI | TGGCCA | 1 cut(s) | 461 |
| MluCI | AATT | 5 cut(s) | 315, 728, 1228, 1269, 1323 |
| MluNI | TGGCCA | 1 cut(s) | 461 |
| MlyI | GAGTC | 3 cut(s) | 799, 1222, 1296 |
| MmeI | TCCRAC | 2 cut(s) | 568, 1070 |
| Mox20I | TGGCCA | 1 cut(s) | 461 |
| Mph1103I | ATGCAT | 1 cut(s) | 1225 |
| MroXI | GAANNNNTTC | 2 cut(s) | 834, 1074 |
| MscI | TGGCCA | 1 cut(s) | 461 |
| MseI | TTAA | 5 cut(s) | 281, 449, 1058, 1182, 1445 |
| Msp20I | TGGCCA | 1 cut(s) | 461 |
| MspR9I | CCNGG | 1 cut(s) | 217 |
| MvaI | CCWGG | 1 cut(s) | 217 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 35, 75, 467 |
| NcoI | CCATGG | 1 cut(s) | 297 |
| NdeII | GATC | 5 cut(s) | 154, 225, 285, 922, 1003 |
| NlaIII | CATG | 7 cut(s) | 301, 398, 530, 1013, 1156, 1227, 1344 |
| NlaIV | GGNNCC | 2 cut(s) | 342, 571 |
| NmuCI | GTSAC | 1 cut(s) | 1452 |
| NsiI | ATGCAT | 1 cut(s) | 1225 |
| NspI | RCATGY | 3 cut(s) | 530, 1013, 1344 |
| PciI | ACATGT | 1 cut(s) | 1340 |
| PciSI | GCTCTTC | 1 cut(s) | 1080 |
| PdmI | GAANNNNTTC | 2 cut(s) | 834, 1074 |
| PfeI | GAWTC | 4 cut(s) | 135, 293, 861, 984 |
| Ple19I | CGATCG | 1 cut(s) | 228 |
| PleI | GAGTC | 3 cut(s) | 799, 1221, 1296 |
| PpsI | GAGTC | 3 cut(s) | 799, 1221, 1296 |
| PpuMI | RGGWCCY | 1 cut(s) | 570 |
| PscI | ACATGT | 1 cut(s) | 1340 |
| Psp5II | RGGWCCY | 1 cut(s) | 570 |
| Psp6I | CCWGG | 1 cut(s) | 215 |
| PspFI | CCCAGC | 1 cut(s) | 470 |
| PspGI | CCWGG | 1 cut(s) | 215 |
| PspN4I | GGNNCC | 2 cut(s) | 342, 571 |
| PspPI | GGNCC | 1 cut(s) | 570 |
| PspPPI | RGGWCCY | 1 cut(s) | 570 |
| PstI | CTGCAG | 1 cut(s) | 31 |
| PsuI | RGATCY | 1 cut(s) | 285 |
| PvuI | CGATCG | 1 cut(s) | 228 |
| RsaI | GTAC | 4 cut(s) | 53, 531, 1205, 1255 |
| RsaNI | GTAC | 4 cut(s) | 52, 530, 1204, 1254 |
| SapI | GCTCTTC | 1 cut(s) | 1080 |
| SaqAI | TTAA | 5 cut(s) | 281, 449, 1058, 1182, 1445 |
| Sau3AI | GATC | 5 cut(s) | 154, 225, 285, 922, 1003 |
| Sau96I | GGNCC | 1 cut(s) | 570 |
| ScaI | AGTACT | 1 cut(s) | 1255 |
| SchI | GAGTC | 3 cut(s) | 799, 1222, 1296 |
| ScrFI | CCNGG | 1 cut(s) | 217 |
| SduI | GDGCHC | 1 cut(s) | 14 |
| SfaNI | GCATC | 4 cut(s) | 433, 556, 750, 1210 |
| SfcI | CTRYAG | 1 cut(s) | 27 |
| SinI | GGWCC | 1 cut(s) | 570 |
| SpeI | ACTAGT | 1 cut(s) | 703 |
| Sse9I | AATT | 5 cut(s) | 315, 728, 1228, 1269, 1323 |
| SsiI | CCGC | 1 cut(s) | 771 |
| StyD4I | CCNGG | 1 cut(s) | 215 |
| StyI | CCWWGG | 1 cut(s) | 297 |
| TaaI | ACNGT | 3 cut(s) | 279, 562, 782 |
| TaiI | ACGT | 3 cut(s) | 60, 1360, 1401 |
| TaqI | TCGA | 3 cut(s) | 649, 1275, 1305 |
| TasI | AATT | 5 cut(s) | 315, 728, 1228, 1269, 1323 |
| TatI | WGTACW | 2 cut(s) | 529, 1253 |
| TfiI | GAWTC | 4 cut(s) | 135, 293, 861, 984 |
| Tru1I | TTAA | 5 cut(s) | 281, 449, 1058, 1182, 1445 |
| Tru9I | TTAA | 5 cut(s) | 281, 449, 1058, 1182, 1445 |
| TscAI | CASTG | 3 cut(s) | 131, 205, 565 |
| TseFI | GTSAC | 1 cut(s) | 1452 |
| Tsp45I | GTSAC | 1 cut(s) | 1452 |
| TspDTI | ATGAA | 4 cut(s) | 411, 513, 1083, 1338 |
| TspGWI | ACGGA | 1 cut(s) | 1264 |
| TspRI | CASTG | 3 cut(s) | 131, 205, 565 |
| VpaK11BI | GGWCC | 1 cut(s) | 570 |
| XapI | RAATTY | 3 cut(s) | 315, 1228, 1323 |
| XceI | RCATGY | 3 cut(s) | 530, 1013, 1344 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1372 |
| XmiI | GTMKAC | 1 cut(s) | 1474 |
| XmnI | GAANNNNTTC | 2 cut(s) | 834, 1074 |
| ZrmI | AGTACT | 1 cut(s) | 1255 |
| Zsp2I | ATGCAT | 1 cut(s) | 1225 |