TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 17 - 187 | 5.1e-49 | TIR domain |
| TIR_2 | PF13676 | 20 - 116 | 1e-15 | TIR domain |
| NB-ARC | PF00931 | 200 - 369 | 2.9e-23 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 437 - 508 | 3e-15 | Disease resistance protein Roq1-like, winged-helix domain |
| C-JID | PF20160 | 770 - 872 | 6.9e-10 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2240 |
| Acc36I | ACCTGC | 1 cut(s) | 20 |
| AccB1I | GGYRCC | 1 cut(s) | 2690 |
| AccI | GTMKAC | 2 cut(s) | 1474, 2068 |
| AciI | CCGC | 4 cut(s) | 771, 896, 2495, 2867 |
| AclI | AACGTT | 1 cut(s) | 849 |
| AclWI | GGATC | 4 cut(s) | 149, 930, 1990, 2365 |
| AcoI | YGGCCR | 1 cut(s) | 459 |
| AcsI | RAATTY | 9 cut(s) | 315, 1228, 1323, 2031, 2038, 2102, 2144, 2254, 2322 |
| AcuI | CTGAAG | 4 cut(s) | 55, 399, 1137, 1709 |
| AdeI | CACNNNGTG | 1 cut(s) | 2459 |
| AfaI | GTAC | 8 cut(s) | 53, 531, 1205, 1255, 1945, 1981, 2433, 2603 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 21 |
| AflIII | ACRYGT | 1 cut(s) | 57 |
| AhlI | ACTAGT | 1 cut(s) | 703 |
| AjiI | CACGTC | 1 cut(s) | 58 |
| AjnI | CCWGG | 4 cut(s) | 215, 1534, 2311, 2505 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 390, 422, 2363, 2395 |
| AleI | CACNNNNGTG | 1 cut(s) | 2460 |
| Alw21I | GWGCWC | 4 cut(s) | 14, 1083, 2425, 2599 |
| Alw26I | GTCTC | 8 cut(s) | 349, 510, 560, 954, 2017, 2040, 2761, 2837 |
| Alw44I | GTGCAC | 1 cut(s) | 2595 |
| AlwI | GGATC | 4 cut(s) | 149, 930, 1990, 2365 |
| AoxI | GGCC | 4 cut(s) | 459, 1165, 1726, 2589 |
| ApaI | GGGCCC | 1 cut(s) | 2593 |
| ApaLI | GTGCAC | 1 cut(s) | 2595 |
| ApeKI | GCWGC | 4 cut(s) | 1693, 2118, 2248, 2414 |
| ApoI | RAATTY | 9 cut(s) | 315, 1228, 1323, 2031, 2038, 2102, 2144, 2254, 2322 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2016, 2048 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 834, 1509, 2656 |
| AspLEI | GCGC | 1 cut(s) | 1545 |
| AspS9I | GGNCC | 6 cut(s) | 570, 1727, 1926, 2512, 2589, 2590 |
| AsuHPI | GGTGA | 4 cut(s) | 1844, 2374, 2468, 2587 |
| AsuII | TTCGAA | 2 cut(s) | 1275, 2541 |
| AvaII | GGWCC | 3 cut(s) | 570, 1926, 2512 |
| AxyI | CCTNAGG | 1 cut(s) | 2880 |
| BaeGI | GKGCMC | 2 cut(s) | 2593, 2599 |
| BalI | TGGCCA | 1 cut(s) | 461 |
| BanI | GGYRCC | 1 cut(s) | 2690 |
| BanII | GRGCYC | 2 cut(s) | 1083, 2593 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1682, 1714 |
| BbsI | GAAGAC | 4 cut(s) | 87, 1650, 2733, 2809 |
| Bbv12I | GWGCWC | 4 cut(s) | 14, 1083, 2425, 2599 |
| BbvI | GCAGC | 4 cut(s) | 1680, 2105, 2260, 2401 |
| BccI | CCATC | 5 cut(s) | 664, 1292, 1306, 2007, 2011 |
| BceAI | ACGGC | 1 cut(s) | 2880 |
| BciT130I | CCWGG | 4 cut(s) | 217, 1536, 2313, 2507 |
| BciVI | GTATCC | 2 cut(s) | 589, 1785 |
| BclI | TGATCA | 3 cut(s) | 1849, 2473, 2625 |
| BcoDI | GTCTC | 8 cut(s) | 349, 510, 560, 954, 2017, 2040, 2761, 2837 |
| BcuI | ACTAGT | 1 cut(s) | 703 |
| BfaI | CTAG | 9 cut(s) | 252, 552, 699, 704, 785, 905, 929, 999, 1016 |
| BfmI | CTRYAG | 1 cut(s) | 27 |
| BfuAI | ACCTGC | 1 cut(s) | 20 |
| BfuI | GTATCC | 2 cut(s) | 589, 1785 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1540 |
| BglII | AGATCT | 1 cut(s) | 285 |
| BisI | GCNGC | 5 cut(s) | 1694, 2119, 2249, 2415, 2495 |
| BlsI | GCNGC | 5 cut(s) | 1695, 2120, 2250, 2416, 2496 |
| BmcAI | AGTACT | 1 cut(s) | 1255 |
| Bme1390I | CCNGG | 4 cut(s) | 217, 1536, 2313, 2507 |
| Bme18I | GGWCC | 3 cut(s) | 570, 1926, 2512 |
| BmgBI | CACGTC | 1 cut(s) | 58 |
| BmgT120I | GGNCC | 6 cut(s) | 570, 1727, 1926, 2512, 2589, 2590 |
| BmrFI | CCNGG | 4 cut(s) | 217, 1536, 2313, 2507 |
| BmrI | ACTGGG | 1 cut(s) | 30 |
| BmsI | GCATC | 6 cut(s) | 433, 556, 750, 1210, 2374, 2555 |
| BmuI | ACTGGG | 1 cut(s) | 30 |
| BpiI | GAAGAC | 4 cut(s) | 87, 1650, 2733, 2809 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 704, 736 |
| BpmI | CTGGAG | 5 cut(s) | 171, 556, 626, 1182, 2528 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1174 |
| Bpu14I | TTCGAA | 2 cut(s) | 1275, 2541 |
| BpuEI | CTTGAG | 5 cut(s) | 1097, 1897, 1976, 2003, 2421 |
| BsaBI | GATNNNNATC | 2 cut(s) | 921, 2472 |
| BsaJI | CCNNGG | 4 cut(s) | 297, 778, 2458, 2694 |
| BsaWI | WCCGGW | 1 cut(s) | 1807 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 169, 199, 1930, 1960, 2346, 2376 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 21 |
| Bse1I | ACTGG | 4 cut(s) | 25, 942, 968, 2299 |
| Bse21I | CCTNAGG | 1 cut(s) | 2880 |
| Bse3DI | GCAATG | 5 cut(s) | 1235, 1411, 1570, 2007, 2012 |
| Bse8I | GATNNNNATC | 2 cut(s) | 921, 2472 |
| BseBI | CCWGG | 4 cut(s) | 217, 1536, 2313, 2507 |
| BseDI | CCNNGG | 4 cut(s) | 297, 778, 2458, 2694 |
| BseJI | GATNNNNATC | 2 cut(s) | 921, 2472 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 21 |
| BseMI | GCAATG | 5 cut(s) | 1235, 1411, 1570, 2007, 2012 |
| BseMII | CTCAG | 3 cut(s) | 360, 588, 2358 |
| BseNI | ACTGG | 4 cut(s) | 25, 942, 968, 2299 |
| BseRI | GAGGAG | 2 cut(s) | 185, 317 |
| BseSI | GKGCMC | 2 cut(s) | 2593, 2599 |
| BseXI | GCAGC | 4 cut(s) | 1680, 2105, 2260, 2401 |
| BseYI | CCCAGC | 1 cut(s) | 470 |
| BsgI | GTGCAG | 1 cut(s) | 2436 |
| Bsh1285I | CGRYCG | 3 cut(s) | 228, 2754, 2830 |
| BshFI | GGCC | 4 cut(s) | 461, 1167, 1728, 2591 |
| BshNI | GGYRCC | 1 cut(s) | 2690 |
| BsiEI | CGRYCG | 3 cut(s) | 228, 2754, 2830 |
| BsiHKAI | GWGCWC | 4 cut(s) | 14, 1083, 2425, 2599 |
| BsiSI | CCGG | 2 cut(s) | 1808, 2269 |
| BslFI | GGGAC | 1 cut(s) | 1097 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 21 |
| BsmAI | GTCTC | 8 cut(s) | 349, 510, 560, 954, 2017, 2040, 2761, 2837 |
| BsmBI | CGTCTC | 2 cut(s) | 2761, 2837 |
| BsmFI | GGGAC | 1 cut(s) | 1097 |
| BsmI | GAATGC | 1 cut(s) | 2736 |
| BsnI | GGCC | 4 cut(s) | 461, 1167, 1728, 2591 |
| Bsp119I | TTCGAA | 2 cut(s) | 1275, 2541 |
| Bsp120I | GGGCCC | 1 cut(s) | 2589 |
| Bsp1286I | GDGCHC | 5 cut(s) | 14, 1083, 2425, 2593, 2599 |
| Bsp19I | CCATGG | 2 cut(s) | 297, 2694 |
| BspACI | CCGC | 4 cut(s) | 771, 896, 2495, 2867 |
| BspANI | GGCC | 4 cut(s) | 461, 1167, 1728, 2591 |
| BspCNI | CTCAG | 3 cut(s) | 359, 587, 2359 |
| BspHI | TCATGA | 1 cut(s) | 2259 |
| BspMAI | CTGCAG | 1 cut(s) | 31 |
| BspMI | ACCTGC | 1 cut(s) | 20 |
| BspPI | GGATC | 4 cut(s) | 149, 930, 1990, 2365 |
| BspQI | GCTCTTC | 2 cut(s) | 1524, 2613 |
| BspT104I | TTCGAA | 2 cut(s) | 1275, 2541 |
| BspT107I | GGYRCC | 1 cut(s) | 2690 |
| BsrDI | GCAATG | 5 cut(s) | 1235, 1411, 1570, 2007, 2012 |
| BsrI | ACTGG | 4 cut(s) | 25, 942, 968, 2299 |
| BssECI | CCNNGG | 4 cut(s) | 297, 778, 2458, 2694 |
| BssNAI | GTATAC | 1 cut(s) | 1475 |
| BssT1I | CCWWGG | 2 cut(s) | 297, 2694 |
| Bst1107I | GTATAC | 1 cut(s) | 1475 |
| Bst2UI | CCWGG | 4 cut(s) | 217, 1536, 2313, 2507 |
| Bst4CI | ACNGT | 6 cut(s) | 279, 562, 782, 1028, 2459, 2601 |
| Bst6I | CTCTTC | 3 cut(s) | 393, 1524, 2613 |
| BstBI | TTCGAA | 2 cut(s) | 1275, 2541 |
| BstC8I | GCNNGC | 1 cut(s) | 269 |
| BstDEI | CTNAG | 8 cut(s) | 346, 574, 600, 1174, 1826, 1901, 2367, 2880 |
| BstDSI | CCRYGG | 4 cut(s) | 297, 778, 2458, 2694 |
| BstHHI | GCGC | 1 cut(s) | 1545 |
| BstMAI | GTCTC | 8 cut(s) | 349, 510, 560, 954, 2017, 2040, 2761, 2837 |
| BstMCI | CGRYCG | 3 cut(s) | 228, 2754, 2830 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 35, 75, 467, 1540, 2420 |
| BstNI | CCWGG | 4 cut(s) | 217, 1536, 2313, 2507 |
| BstNSI | RCATGY | 4 cut(s) | 530, 1013, 1344, 2421 |
| BstSCI | CCNGG | 4 cut(s) | 215, 1534, 2311, 2505 |
| BstSFI | CTRYAG | 1 cut(s) | 27 |
| BstSLI | GKGCMC | 2 cut(s) | 2593, 2599 |
| BstV1I | GCAGC | 4 cut(s) | 1680, 2105, 2260, 2401 |
| BstV2I | GAAGAC | 4 cut(s) | 87, 1650, 2733, 2809 |
| BstX2I | RGATCY | 2 cut(s) | 285, 1995 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1224 |
| BstYI | RGATCY | 2 cut(s) | 285, 1995 |
| BstZ17I | GTATAC | 1 cut(s) | 1475 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2880 |
| BsuI | GTATCC | 2 cut(s) | 589, 1785 |
| BsuRI | GGCC | 4 cut(s) | 461, 1167, 1728, 2591 |
| BtgI | CCRYGG | 4 cut(s) | 297, 778, 2458, 2694 |
| BtgZI | GCGATG | 1 cut(s) | 1321 |
| BtrI | CACGTC | 1 cut(s) | 58 |
| BtsI | GCAGTG | 2 cut(s) | 131, 198 |
| BtsIMutI | CAGTG | 4 cut(s) | 131, 198, 558, 2597 |
| BveI | ACCTGC | 1 cut(s) | 20 |
| Cac8I | GCNNGC | 1 cut(s) | 269 |
| CciI | TCATGA | 1 cut(s) | 2259 |
| CfoI | GCGC | 1 cut(s) | 1545 |
| Cfr13I | GGNCC | 6 cut(s) | 570, 1727, 1926, 2512, 2589, 2590 |
| CseI | GACGC | 1 cut(s) | 1655 |
| Csp6I | GTAC | 8 cut(s) | 52, 530, 1204, 1254, 1944, 1980, 2432, 2602 |
| CviQI | GTAC | 8 cut(s) | 52, 530, 1204, 1254, 1944, 1980, 2432, 2602 |
| DdeI | CTNAG | 8 cut(s) | 346, 574, 600, 1174, 1826, 1901, 2367, 2880 |
| DraIII | CACNNNGTG | 1 cut(s) | 2459 |
| EaeI | YGGCCR | 1 cut(s) | 459 |
| Eam1104I | CTCTTC | 3 cut(s) | 393, 1524, 2613 |
| EarI | CTCTTC | 3 cut(s) | 393, 1524, 2613 |
| EciI | GGCGGA | 1 cut(s) | 2882 |
| Ecl136II | GAGCTC | 1 cut(s) | 1081 |
| Eco130I | CCWWGG | 2 cut(s) | 297, 2694 |
| Eco147I | AGGCCT | 1 cut(s) | 1167 |
| Eco24I | GRGCYC | 2 cut(s) | 1083, 2593 |
| Eco47I | GGWCC | 3 cut(s) | 570, 1926, 2512 |
| Eco53kI | GAGCTC | 1 cut(s) | 1081 |
| Eco57I | CTGAAG | 4 cut(s) | 55, 399, 1137, 1709 |
| Eco81I | CCTNAGG | 1 cut(s) | 2880 |
| EcoICRI | GAGCTC | 1 cut(s) | 1081 |
| EcoO109I | RGGNCCY | 4 cut(s) | 570, 1926, 2512, 2589 |
| EcoRI | GAATTC | 2 cut(s) | 315, 1228 |
| EcoRII | CCWGG | 4 cut(s) | 215, 1534, 2311, 2505 |
| EcoT14I | CCWWGG | 2 cut(s) | 297, 2694 |
| EcoT22I | ATGCAT | 2 cut(s) | 1225, 2570 |
| EcoT38I | GRGCYC | 2 cut(s) | 1083, 2593 |
| ErhI | CCWWGG | 2 cut(s) | 297, 2694 |
| Esp3I | CGTCTC | 2 cut(s) | 2761, 2837 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 885, 917, 2644, 2676 |
| FaqI | GGGAC | 1 cut(s) | 1097 |
| FauNDI | CATATG | 2 cut(s) | 1042, 2085 |
| FbaI | TGATCA | 3 cut(s) | 1849, 2473, 2625 |
| FblI | GTMKAC | 2 cut(s) | 1474, 2068 |
| Fnu4HI | GCNGC | 5 cut(s) | 1694, 2119, 2249, 2415, 2495 |
| FriOI | GRGCYC | 2 cut(s) | 1083, 2593 |
| Fsp4HI | GCNGC | 5 cut(s) | 1694, 2119, 2249, 2415, 2495 |
| FspBI | CTAG | 9 cut(s) | 252, 552, 699, 704, 785, 905, 929, 999, 1016 |
| GlaI | GCGC | 1 cut(s) | 1544 |
| GluI | GCNGC | 5 cut(s) | 1694, 2119, 2249, 2415, 2495 |
| GsaI | CCCAGC | 1 cut(s) | 474 |
| GsuI | CTGGAG | 5 cut(s) | 171, 556, 626, 1182, 2528 |
| HaeIII | GGCC | 4 cut(s) | 461, 1167, 1728, 2591 |
| HapII | CCGG | 2 cut(s) | 1808, 2269 |
| HgaI | GACGC | 1 cut(s) | 1655 |
| HhaI | GCGC | 1 cut(s) | 1545 |
| Hin6I | GCGC | 1 cut(s) | 1543 |
| HinP1I | GCGC | 1 cut(s) | 1543 |
| HincII | GTYRAC | 1 cut(s) | 2304 |
| HindII | GTYRAC | 1 cut(s) | 2304 |
| HindIII | AAGCTT | 2 cut(s) | 370, 1095 |
| HpaII | CCGG | 2 cut(s) | 1808, 2269 |
| HphI | GGTGA | 4 cut(s) | 1844, 2374, 2468, 2587 |
| Hpy166II | GTNNAC | 7 cut(s) | 1475, 1685, 2069, 2304, 2597, 2768, 2844 |
| Hpy188I | TCNGA | 8 cut(s) | 74, 349, 515, 577, 761, 1396, 1459, 2808 |
| Hpy8I | GTNNAC | 7 cut(s) | 1475, 1685, 2069, 2304, 2597, 2768, 2844 |
| Hpy99I | CGWCG | 1 cut(s) | 59 |
| HpyCH4III | ACNGT | 6 cut(s) | 279, 562, 782, 1028, 2459, 2601 |
| HpyCH4IV | ACGT | 4 cut(s) | 57, 849, 1398, 2531 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 35, 75, 467, 1540, 2420 |
| HpyF3I | CTNAG | 8 cut(s) | 346, 574, 600, 1174, 1826, 1901, 2367, 2880 |
| HpySE526I | ACGT | 4 cut(s) | 57, 849, 1398, 2531 |
| HspAI | GCGC | 1 cut(s) | 1543 |
| Ksp22I | TGATCA | 3 cut(s) | 1849, 2473, 2625 |
| LguI | GCTCTTC | 2 cut(s) | 1524, 2613 |
| LmnI | GCTCC | 3 cut(s) | 537, 1604, 2869 |
| Lsp1109I | GCAGC | 4 cut(s) | 1680, 2105, 2260, 2401 |
| LweI | GCATC | 6 cut(s) | 433, 556, 750, 1210, 2374, 2555 |
| MaeI | CTAG | 9 cut(s) | 252, 552, 699, 704, 785, 905, 929, 999, 1016 |
| MaeII | ACGT | 4 cut(s) | 57, 849, 1398, 2531 |
| MaeIII | GTNAC | 5 cut(s) | 1018, 1623, 1904, 2362, 2527 |
| MfeI | CAATTG | 1 cut(s) | 2214 |
| MflI | RGATCY | 2 cut(s) | 285, 1995 |
| MhlI | GDGCHC | 5 cut(s) | 14, 1083, 2425, 2593, 2599 |
| MlsI | TGGCCA | 1 cut(s) | 461 |
| MluNI | TGGCCA | 1 cut(s) | 461 |
| MlyI | GAGTC | 5 cut(s) | 799, 1222, 1529, 2019, 2074 |
| MmeI | TCCRAC | 2 cut(s) | 568, 1070 |
| Mox20I | TGGCCA | 1 cut(s) | 461 |
| Mph1103I | ATGCAT | 2 cut(s) | 1225, 2570 |
| MroXI | GAANNNNTTC | 3 cut(s) | 834, 1509, 2656 |
| MscI | TGGCCA | 1 cut(s) | 461 |
| MslI | CAYNNNNRTG | 2 cut(s) | 2460, 2573 |
| Msp20I | TGGCCA | 1 cut(s) | 461 |
| MspI | CCGG | 2 cut(s) | 1808, 2269 |
| MspR9I | CCNGG | 4 cut(s) | 217, 1536, 2313, 2507 |
| MunI | CAATTG | 1 cut(s) | 2214 |
| Mva1269I | GAATGC | 1 cut(s) | 2736 |
| MvaI | CCWGG | 4 cut(s) | 217, 1536, 2313, 2507 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 35, 75, 467, 1540, 2420 |
| NcoI | CCATGG | 2 cut(s) | 297, 2694 |
| NdeI | CATATG | 2 cut(s) | 1042, 2085 |
| NmuCI | GTSAC | 2 cut(s) | 1018, 2362 |
| NsiI | ATGCAT | 2 cut(s) | 1225, 2570 |
| NspI | RCATGY | 4 cut(s) | 530, 1013, 1344, 2421 |
| NspV | TTCGAA | 2 cut(s) | 1275, 2541 |
| OliI | CACNNNNGTG | 1 cut(s) | 2460 |
| PagI | TCATGA | 1 cut(s) | 2259 |
| PceI | AGGCCT | 1 cut(s) | 1167 |
| PciSI | GCTCTTC | 2 cut(s) | 1524, 2613 |
| PctI | GAATGC | 1 cut(s) | 2736 |
| PdmI | GAANNNNTTC | 3 cut(s) | 834, 1509, 2656 |
| PfeI | GAWTC | 6 cut(s) | 135, 293, 861, 984, 1657, 2137 |
| PfoI | TCCNGGA | 1 cut(s) | 2311 |
| PkrI | GCNGC | 5 cut(s) | 1695, 2120, 2250, 2416, 2496 |
| Ple19I | CGATCG | 1 cut(s) | 228 |
| PleI | GAGTC | 5 cut(s) | 799, 1221, 1528, 2019, 2073 |
| PpsI | GAGTC | 5 cut(s) | 799, 1221, 1528, 2019, 2073 |
| PpuMI | RGGWCCY | 3 cut(s) | 570, 1926, 2512 |
| PsiI | TTATAA | 1 cut(s) | 2240 |
| Psp124BI | GAGCTC | 1 cut(s) | 1083 |
| Psp1406I | AACGTT | 1 cut(s) | 849 |
| Psp5II | RGGWCCY | 3 cut(s) | 570, 1926, 2512 |
| Psp6I | CCWGG | 4 cut(s) | 215, 1534, 2311, 2505 |
| PspFI | CCCAGC | 1 cut(s) | 470 |
| PspGI | CCWGG | 4 cut(s) | 215, 1534, 2311, 2505 |
| PspOMI | GGGCCC | 1 cut(s) | 2589 |
| PspPI | GGNCC | 6 cut(s) | 570, 1727, 1926, 2512, 2589, 2590 |
| PspPPI | RGGWCCY | 3 cut(s) | 570, 1926, 2512 |
| PstI | CTGCAG | 1 cut(s) | 31 |
| PsuI | RGATCY | 2 cut(s) | 285, 1995 |
| PvuI | CGATCG | 1 cut(s) | 228 |
| RsaI | GTAC | 8 cut(s) | 53, 531, 1205, 1255, 1945, 1981, 2433, 2603 |
| RsaNI | GTAC | 8 cut(s) | 52, 530, 1204, 1254, 1944, 1980, 2432, 2602 |
| RseI | CAYNNNNRTG | 2 cut(s) | 2460, 2573 |
| SacI | GAGCTC | 1 cut(s) | 1083 |
| SapI | GCTCTTC | 2 cut(s) | 1524, 2613 |
| SatI | GCNGC | 5 cut(s) | 1694, 2119, 2249, 2415, 2495 |
| Sau96I | GGNCC | 6 cut(s) | 570, 1727, 1926, 2512, 2589, 2590 |
| ScaI | AGTACT | 1 cut(s) | 1255 |
| SchI | GAGTC | 5 cut(s) | 799, 1222, 1529, 2019, 2074 |
| ScrFI | CCNGG | 4 cut(s) | 217, 1536, 2313, 2507 |
| SduI | GDGCHC | 5 cut(s) | 14, 1083, 2425, 2593, 2599 |
| SfaNI | GCATC | 6 cut(s) | 433, 556, 750, 1210, 2374, 2555 |
| SfcI | CTRYAG | 1 cut(s) | 27 |
| SfuI | TTCGAA | 2 cut(s) | 1275, 2541 |
| SinI | GGWCC | 3 cut(s) | 570, 1926, 2512 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 2460, 2573 |
| SmlI | CTYRAG | 5 cut(s) | 1076, 1876, 1955, 2018, 2436 |
| SmoI | CTYRAG | 5 cut(s) | 1076, 1876, 1955, 2018, 2436 |
| SpeI | ACTAGT | 1 cut(s) | 703 |
| SseBI | AGGCCT | 1 cut(s) | 1167 |
| SsiI | CCGC | 4 cut(s) | 771, 896, 2495, 2867 |
| SspI | AATATT | 1 cut(s) | 1846 |
| SspMI | CTAG | 9 cut(s) | 252, 552, 699, 704, 785, 905, 929, 999, 1016 |
| SstI | GAGCTC | 1 cut(s) | 1083 |
| StuI | AGGCCT | 1 cut(s) | 1167 |
| StyD4I | CCNGG | 4 cut(s) | 215, 1534, 2311, 2505 |
| StyI | CCWWGG | 2 cut(s) | 297, 2694 |
| TaaI | ACNGT | 6 cut(s) | 279, 562, 782, 1028, 2459, 2601 |
| TaiI | ACGT | 4 cut(s) | 60, 852, 1401, 2534 |
| TaqI | TCGA | 6 cut(s) | 649, 1275, 1360, 1896, 2541, 2802 |
| TaqII | GACCGA | 2 cut(s) | 2740, 2816 |
| TatI | WGTACW | 2 cut(s) | 529, 1253 |
| TauI | GCSGC | 1 cut(s) | 2497 |
| TfiI | GAWTC | 6 cut(s) | 135, 293, 861, 984, 1657, 2137 |
| TscAI | CASTG | 4 cut(s) | 131, 205, 565, 2604 |
| TseFI | GTSAC | 2 cut(s) | 1018, 2362 |
| TseI | GCWGC | 4 cut(s) | 1693, 2118, 2248, 2414 |
| Tsp45I | GTSAC | 2 cut(s) | 1018, 2362 |
| TspGWI | ACGGA | 3 cut(s) | 1264, 2436, 2690 |
| TspRI | CASTG | 4 cut(s) | 131, 205, 565, 2604 |
| VneI | GTGCAC | 1 cut(s) | 2595 |
| VpaK11BI | GGWCC | 3 cut(s) | 570, 1926, 2512 |
| XapI | RAATTY | 9 cut(s) | 315, 1228, 1323, 2031, 2038, 2102, 2144, 2254, 2322 |
| XceI | RCATGY | 4 cut(s) | 530, 1013, 1344, 2421 |
| XmiI | GTMKAC | 2 cut(s) | 1474, 2068 |
| XmnI | GAANNNNTTC | 3 cut(s) | 834, 1509, 2656 |
| XspI | CTAG | 9 cut(s) | 252, 552, 699, 704, 785, 905, 929, 999, 1016 |
| ZrmI | AGTACT | 1 cut(s) | 1255 |
| Zsp2I | ATGCAT | 2 cut(s) | 1225, 2570 |