TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 18 - 198 | 5.8e-56 | TIR domain |
| TIR_2 | PF13676 | 21 - 117 | 1.5e-15 | TIR domain |
| NB-ARC | PF00931 | 201 - 370 | 1e-22 | NB-ARC domain |
| NACHT | PF05729 | 222 - 364 | 6.6e-06 | NACHT domain |
| WHD_ROQ1 | PF23282 | 439 - 508 | 3e-08 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 669 - 743 | 1.6e-08 | Leucine-rich repeat region |
| C-JID | PF20160 | 818 - 950 | 3.2e-12 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1910 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 124 |
| AccI | GTMKAC | 1 cut(s) | 1392 |
| AccIII | TCCGGA | 2 cut(s) | 190, 2733 |
| AciI | CCGC | 6 cut(s) | 91, 902, 1354, 2234, 2404, 2664 |
| AclWI | GGATC | 6 cut(s) | 135, 152, 338, 351, 936, 2291 |
| AcoI | YGGCCR | 1 cut(s) | 462 |
| AcsI | RAATTY | 5 cut(s) | 810, 1234, 1329, 2079, 2466 |
| AcuI | CTGAAG | 7 cut(s) | 402, 1067, 1143, 1712, 2091, 2616, 2770 |
| AdeI | CACNNNGTG | 1 cut(s) | 1034 |
| AfaI | GTAC | 5 cut(s) | 500, 1020, 2275, 2356, 2568 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 124, 2115, 2663, 2755 |
| AflII | CTTAAG | 1 cut(s) | 1937 |
| AflIII | ACRYGT | 2 cut(s) | 60, 2532 |
| AhlI | ACTAGT | 2 cut(s) | 1021, 1387 |
| AjiI | CACGTC | 1 cut(s) | 61 |
| AjnI | CCWGG | 3 cut(s) | 1470, 1537, 2455 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 393, 425, 1226, 1258 |
| Alw21I | GWGCWC | 3 cut(s) | 14, 198, 2560 |
| Alw26I | GTCTC | 5 cut(s) | 352, 473, 563, 2116, 2493 |
| AlwI | GGATC | 6 cut(s) | 135, 152, 338, 351, 936, 2291 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2510 |
| Ama87I | CYCGRG | 1 cut(s) | 1005 |
| Aor13HI | TCCGGA | 2 cut(s) | 190, 2733 |
| AoxI | GGCC | 3 cut(s) | 462, 1729, 2823 |
| ApaI | GGGCCC | 1 cut(s) | 2827 |
| ApeKI | GCWGC | 5 cut(s) | 372, 1696, 1918, 2886, 2951 |
| ApoI | RAATTY | 5 cut(s) | 810, 1234, 1329, 2079, 2466 |
| Asp700I | GAANNNNTTC | 5 cut(s) | 387, 840, 1080, 1515, 2024 |
| AspLEI | GCGC | 1 cut(s) | 1888 |
| AspS9I | GGNCC | 4 cut(s) | 1730, 2640, 2823, 2824 |
| AsuHPI | GGTGA | 6 cut(s) | 92, 234, 1847, 1982, 2693, 2944 |
| AvaI | CYCGRG | 1 cut(s) | 1005 |
| AvaII | GGWCC | 1 cut(s) | 2640 |
| BaeGI | GKGCMC | 1 cut(s) | 2827 |
| BalI | TGGCCA | 1 cut(s) | 464 |
| BamHI | GGATCC | 1 cut(s) | 343 |
| BanII | GRGCYC | 2 cut(s) | 198, 2827 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1685, 1717 |
| BauI | CACGAG | 1 cut(s) | 119 |
| BbsI | GAAGAC | 5 cut(s) | 90, 1166, 1553, 1733, 2776 |
| Bbv12I | GWGCWC | 3 cut(s) | 14, 198, 2560 |
| BbvI | GCAGC | 5 cut(s) | 384, 1683, 1930, 2898, 2963 |
| BccI | CCATC | 8 cut(s) | 191, 334, 471, 667, 1298, 1312, 2430, 2652 |
| BceAI | ACGGC | 1 cut(s) | 2573 |
| BciT130I | CCWGG | 3 cut(s) | 1472, 1539, 2457 |
| BciVI | GTATCC | 2 cut(s) | 592, 1788 |
| BclI | TGATCA | 2 cut(s) | 1852, 2859 |
| BcoDI | GTCTC | 5 cut(s) | 352, 473, 563, 2116, 2493 |
| BcuI | ACTAGT | 2 cut(s) | 1021, 1387 |
| BfaI | CTAG | 8 cut(s) | 293, 555, 707, 791, 911, 1022, 1388, 2376 |
| BfmI | CTRYAG | 2 cut(s) | 1105, 2994 |
| BfoI | RGCGCY | 1 cut(s) | 1889 |
| BfrI | CTTAAG | 1 cut(s) | 1937 |
| BfuI | GTATCC | 2 cut(s) | 592, 1788 |
| BglII | AGATCT | 1 cut(s) | 720 |
| BisI | GCNGC | 5 cut(s) | 373, 1697, 1919, 2887, 2952 |
| BlsI | GCNGC | 5 cut(s) | 374, 1698, 1920, 2888, 2953 |
| Bme1390I | CCNGG | 3 cut(s) | 1472, 1539, 2457 |
| Bme18I | GGWCC | 1 cut(s) | 2640 |
| BmeT110I | CYCGRG | 1 cut(s) | 1005 |
| BmgBI | CACGTC | 1 cut(s) | 61 |
| BmgT120I | GGNCC | 4 cut(s) | 1730, 2640, 2823, 2824 |
| BmiI | GGNNCC | 6 cut(s) | 25, 345, 574, 2642, 2824, 2825 |
| BmrFI | CCNGG | 3 cut(s) | 1472, 1539, 2457 |
| BmsI | GCATC | 6 cut(s) | 436, 559, 753, 1964, 2362, 2799 |
| BpiI | GAAGAC | 5 cut(s) | 90, 1166, 1553, 1733, 2776 |
| BpmI | CTGGAG | 5 cut(s) | 629, 1188, 1206, 2556, 2774 |
| BpuEI | CTTGAG | 3 cut(s) | 1774, 2371, 2432 |
| Bsa29I | ATCGAT | 1 cut(s) | 218 |
| BsaBI | GATNNNNATC | 1 cut(s) | 927 |
| BsaJI | CCNNGG | 5 cut(s) | 47, 76, 784, 2625, 2636 |
| BsaWI | WCCGGW | 3 cut(s) | 190, 1810, 2733 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2490, 2520 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 124, 2115, 2663, 2755 |
| Bse118I | RCCGGY | 1 cut(s) | 2236 |
| Bse1I | ACTGG | 2 cut(s) | 326, 465 |
| Bse3DI | GCAATG | 3 cut(s) | 1341, 1375, 2773 |
| Bse8I | GATNNNNATC | 1 cut(s) | 927 |
| BseAI | TCCGGA | 2 cut(s) | 190, 2733 |
| BseBI | CCWGG | 3 cut(s) | 1472, 1539, 2457 |
| BseCI | ATCGAT | 1 cut(s) | 218 |
| BseDI | CCNNGG | 5 cut(s) | 47, 76, 784, 2625, 2636 |
| BseGI | GGATG | 7 cut(s) | 160, 482, 550, 678, 859, 1819, 2917 |
| BseJI | GATNNNNATC | 1 cut(s) | 927 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 124, 2115, 2663, 2755 |
| BseMI | GCAATG | 3 cut(s) | 1341, 1375, 2773 |
| BseNI | ACTGG | 2 cut(s) | 326, 465 |
| BseRI | GAGGAG | 2 cut(s) | 320, 997 |
| BseSI | GKGCMC | 1 cut(s) | 2827 |
| BseXI | GCAGC | 5 cut(s) | 384, 1683, 1930, 2898, 2963 |
| BseYI | CCCAGC | 1 cut(s) | 955 |
| BsgI | GTGCAG | 1 cut(s) | 2332 |
| Bsh1285I | CGRYCG | 2 cut(s) | 231, 2361 |
| BshFI | GGCC | 3 cut(s) | 464, 1731, 2825 |
| BshVI | ATCGAT | 1 cut(s) | 218 |
| BsiEI | CGRYCG | 2 cut(s) | 231, 2361 |
| BsiHKAI | GWGCWC | 3 cut(s) | 14, 198, 2560 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1005 |
| BsiSI | CCGG | 4 cut(s) | 191, 1811, 2237, 2734 |
| BslFI | GGGAC | 2 cut(s) | 328, 1074 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 124, 2115, 2663, 2755 |
| BsmAI | GTCTC | 5 cut(s) | 352, 473, 563, 2116, 2493 |
| BsmFI | GGGAC | 2 cut(s) | 328, 1074 |
| BsmI | GAATGC | 3 cut(s) | 302, 2160, 2607 |
| BsnI | GGCC | 3 cut(s) | 464, 1731, 2825 |
| BsoBI | CYCGRG | 1 cut(s) | 1005 |
| Bsp120I | GGGCCC | 1 cut(s) | 2823 |
| Bsp1286I | GDGCHC | 4 cut(s) | 14, 198, 2560, 2827 |
| Bsp13I | TCCGGA | 2 cut(s) | 190, 2733 |
| BspACI | CCGC | 6 cut(s) | 91, 902, 1354, 2234, 2404, 2664 |
| BspANI | GGCC | 3 cut(s) | 464, 1731, 2825 |
| BspDI | ATCGAT | 1 cut(s) | 218 |
| BspEI | TCCGGA | 2 cut(s) | 190, 2733 |
| BspLI | GGNNCC | 6 cut(s) | 25, 345, 574, 2642, 2824, 2825 |
| BspMAI | CTGCAG | 1 cut(s) | 2998 |
| BspPI | GGATC | 6 cut(s) | 135, 152, 338, 351, 936, 2291 |
| BspQI | GCTCTTC | 2 cut(s) | 1086, 1527 |
| BspTI | CTTAAG | 1 cut(s) | 1937 |
| BsrDI | GCAATG | 3 cut(s) | 1341, 1375, 2773 |
| BsrFI | RCCGGY | 1 cut(s) | 2236 |
| BsrI | ACTGG | 2 cut(s) | 326, 465 |
| BssAI | RCCGGY | 1 cut(s) | 2236 |
| BssECI | CCNNGG | 5 cut(s) | 47, 76, 784, 2625, 2636 |
| BssNAI | GTATAC | 1 cut(s) | 1393 |
| BssSI | CACGAG | 1 cut(s) | 119 |
| BssT1I | CCWWGG | 3 cut(s) | 784, 2625, 2636 |
| Bst1107I | GTATAC | 1 cut(s) | 1393 |
| Bst2BI | CACGAG | 1 cut(s) | 119 |
| Bst2UI | CCWGG | 3 cut(s) | 1472, 1539, 2457 |
| Bst4CI | ACNGT | 8 cut(s) | 282, 537, 565, 1397, 2060, 2115, 2359, 2750 |
| Bst6I | CTCTTC | 6 cut(s) | 396, 1086, 1267, 1527, 1641, 2035 |
| BstAFI | CTTAAG | 1 cut(s) | 1937 |
| BstC8I | GCNNGC | 4 cut(s) | 43, 1358, 2158, 2238 |
| BstDSI | CCRYGG | 1 cut(s) | 47 |
| BstEII | GGTNACC | 1 cut(s) | 2260 |
| BstF5I | GGATG | 7 cut(s) | 160, 482, 550, 678, 859, 1819, 2917 |
| BstH2I | RGCGCY | 1 cut(s) | 1889 |
| BstHHI | GCGC | 1 cut(s) | 1888 |
| BstMAI | GTCTC | 5 cut(s) | 352, 473, 563, 2116, 2493 |
| BstMCI | CGRYCG | 2 cut(s) | 231, 2361 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 470, 2176, 2346, 2555 |
| BstNI | CCWGG | 3 cut(s) | 1472, 1539, 2457 |
| BstNSI | RCATGY | 4 cut(s) | 1019, 1509, 2536, 2766 |
| BstPI | GGTNACC | 1 cut(s) | 2260 |
| BstSCI | CCNGG | 3 cut(s) | 1470, 1537, 2455 |
| BstSFI | CTRYAG | 2 cut(s) | 1105, 2994 |
| BstSLI | GKGCMC | 1 cut(s) | 2827 |
| BstV1I | GCAGC | 5 cut(s) | 384, 1683, 1930, 2898, 2963 |
| BstV2I | GAAGAC | 5 cut(s) | 90, 1166, 1553, 1733, 2776 |
| BstX2I | RGATCY | 3 cut(s) | 343, 720, 2296 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1230 |
| BstYI | RGATCY | 3 cut(s) | 343, 720, 2296 |
| BstZ17I | GTATAC | 1 cut(s) | 1393 |
| Bsu15I | ATCGAT | 1 cut(s) | 218 |
| BsuI | GTATCC | 2 cut(s) | 592, 1788 |
| BsuRI | GGCC | 3 cut(s) | 464, 1731, 2825 |
| BsuTUI | ATCGAT | 1 cut(s) | 218 |
| BtgI | CCRYGG | 1 cut(s) | 47 |
| BtgZI | GCGATG | 1 cut(s) | 2408 |
| BtrI | CACGTC | 1 cut(s) | 61 |
| BtsCI | GGATG | 7 cut(s) | 160, 482, 550, 678, 859, 1819, 2917 |
| BtsIMutI | CAGTG | 2 cut(s) | 2120, 2400 |
| Cac8I | GCNNGC | 4 cut(s) | 43, 1358, 2158, 2238 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2510 |
| CfoI | GCGC | 1 cut(s) | 1888 |
| Cfr10I | RCCGGY | 1 cut(s) | 2236 |
| Cfr13I | GGNCC | 4 cut(s) | 1730, 2640, 2823, 2824 |
| ClaI | ATCGAT | 1 cut(s) | 218 |
| CseI | GACGC | 2 cut(s) | 1554, 2329 |
| CsiI | ACCWGGT | 1 cut(s) | 1470 |
| Csp6I | GTAC | 5 cut(s) | 499, 1019, 2274, 2355, 2567 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 2289, 2324, 2800, 2835 |
| CviQI | GTAC | 5 cut(s) | 499, 1019, 2274, 2355, 2567 |
| DraIII | CACNNNGTG | 1 cut(s) | 1034 |
| EaeI | YGGCCR | 1 cut(s) | 462 |
| Eam1104I | CTCTTC | 6 cut(s) | 396, 1086, 1267, 1527, 1641, 2035 |
| EarI | CTCTTC | 6 cut(s) | 396, 1086, 1267, 1527, 1641, 2035 |
| EciI | GGCGGA | 1 cut(s) | 2223 |
| Ecl136II | GAGCTC | 1 cut(s) | 196 |
| Eco130I | CCWWGG | 3 cut(s) | 784, 2625, 2636 |
| Eco24I | GRGCYC | 2 cut(s) | 198, 2827 |
| Eco47I | GGWCC | 1 cut(s) | 2640 |
| Eco53kI | GAGCTC | 1 cut(s) | 196 |
| Eco57I | CTGAAG | 7 cut(s) | 402, 1067, 1143, 1712, 2091, 2616, 2770 |
| Eco88I | CYCGRG | 1 cut(s) | 1005 |
| Eco91I | GGTNACC | 1 cut(s) | 2260 |
| EcoICRI | GAGCTC | 1 cut(s) | 196 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2823 |
| EcoO65I | GGTNACC | 1 cut(s) | 2260 |
| EcoRI | GAATTC | 1 cut(s) | 1234 |
| EcoRII | CCWGG | 3 cut(s) | 1470, 1537, 2455 |
| EcoT14I | CCWWGG | 3 cut(s) | 784, 2625, 2636 |
| EcoT22I | ATGCAT | 1 cut(s) | 302 |
| EcoT38I | GRGCYC | 2 cut(s) | 198, 2827 |
| ErhI | CCWWGG | 3 cut(s) | 784, 2625, 2636 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 254, 286, 891, 923, 2768, 2800 |
| FaqI | GGGAC | 2 cut(s) | 328, 1074 |
| FauI | CCCGC | 1 cut(s) | 98 |
| FauNDI | CATATG | 1 cut(s) | 1048 |
| FbaI | TGATCA | 2 cut(s) | 1852, 2859 |
| FblI | GTMKAC | 1 cut(s) | 1392 |
| Fnu4HI | GCNGC | 5 cut(s) | 373, 1697, 1919, 2887, 2952 |
| FokI | GGATG | 7 cut(s) | 167, 489, 537, 685, 866, 1826, 2924 |
| FriOI | GRGCYC | 2 cut(s) | 198, 2827 |
| Fsp4HI | GCNGC | 5 cut(s) | 373, 1697, 1919, 2887, 2952 |
| FspBI | CTAG | 8 cut(s) | 293, 555, 707, 791, 911, 1022, 1388, 2376 |
| GlaI | GCGC | 1 cut(s) | 1887 |
| GluI | GCNGC | 5 cut(s) | 373, 1697, 1919, 2887, 2952 |
| GsaI | CCCAGC | 1 cut(s) | 959 |
| GsuI | CTGGAG | 5 cut(s) | 629, 1188, 1206, 2556, 2774 |
| HaeII | RGCGCY | 1 cut(s) | 1889 |
| HaeIII | GGCC | 3 cut(s) | 464, 1731, 2825 |
| HapII | CCGG | 4 cut(s) | 191, 1811, 2237, 2734 |
| HgaI | GACGC | 2 cut(s) | 1554, 2329 |
| HhaI | GCGC | 1 cut(s) | 1888 |
| Hin6I | GCGC | 1 cut(s) | 1886 |
| HinP1I | GCGC | 1 cut(s) | 1886 |
| HpaII | CCGG | 4 cut(s) | 191, 1811, 2237, 2734 |
| HphI | GGTGA | 6 cut(s) | 92, 234, 1847, 1982, 2693, 2944 |
| Hpy166II | GTNNAC | 3 cut(s) | 1393, 1544, 1688 |
| Hpy8I | GTNNAC | 3 cut(s) | 1393, 1544, 1688 |
| Hpy99I | CGWCG | 2 cut(s) | 62, 2984 |
| HpyCH4III | ACNGT | 8 cut(s) | 282, 537, 565, 1397, 2060, 2115, 2359, 2750 |
| HpyCH4IV | ACGT | 1 cut(s) | 60 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 470, 2176, 2346, 2555 |
| HpySE526I | ACGT | 1 cut(s) | 60 |
| HspAI | GCGC | 1 cut(s) | 1886 |
| Kpn2I | TCCGGA | 2 cut(s) | 190, 2733 |
| KroI | GCCGGC | 1 cut(s) | 2236 |
| KroNI | GCCGGC | 1 cut(s) | 2238 |
| Ksp22I | TGATCA | 2 cut(s) | 1852, 2859 |
| LguI | GCTCTTC | 2 cut(s) | 1086, 1527 |
| LmnI | GCTCC | 3 cut(s) | 23, 193, 540 |
| Lsp1109I | GCAGC | 5 cut(s) | 384, 1683, 1930, 2898, 2963 |
| LweI | GCATC | 6 cut(s) | 436, 559, 753, 1964, 2362, 2799 |
| MabI | ACCWGGT | 1 cut(s) | 1470 |
| MaeI | CTAG | 8 cut(s) | 293, 555, 707, 791, 911, 1022, 1388, 2376 |
| MaeII | ACGT | 1 cut(s) | 60 |
| MaeIII | GTNAC | 6 cut(s) | 199, 1024, 2243, 2260, 2506, 2517 |
| MfeI | CAATTG | 5 cut(s) | 2219, 2269, 2335, 2344, 2797 |
| MflI | RGATCY | 3 cut(s) | 343, 720, 2296 |
| MhlI | GDGCHC | 4 cut(s) | 14, 198, 2560, 2827 |
| MlsI | TGGCCA | 1 cut(s) | 464 |
| MluNI | TGGCCA | 1 cut(s) | 464 |
| MlyI | GAGTC | 3 cut(s) | 1993, 2118, 2495 |
| MmeI | TCCRAC | 3 cut(s) | 105, 571, 1748 |
| Mox20I | TGGCCA | 1 cut(s) | 464 |
| Mph1103I | ATGCAT | 1 cut(s) | 302 |
| MroI | TCCGGA | 2 cut(s) | 190, 2733 |
| MroNI | GCCGGC | 1 cut(s) | 2236 |
| MroXI | GAANNNNTTC | 5 cut(s) | 387, 840, 1080, 1515, 2024 |
| MscI | TGGCCA | 1 cut(s) | 464 |
| MseI | TTAA | 8 cut(s) | 452, 1158, 1188, 1451, 1938, 2045, 2252, 2660 |
| Msp20I | TGGCCA | 1 cut(s) | 464 |
| MspCI | CTTAAG | 1 cut(s) | 1937 |
| MspI | CCGG | 4 cut(s) | 191, 1811, 2237, 2734 |
| MspR9I | CCNGG | 3 cut(s) | 1472, 1539, 2457 |
| MunI | CAATTG | 5 cut(s) | 2219, 2269, 2335, 2344, 2797 |
| Mva1269I | GAATGC | 3 cut(s) | 302, 2160, 2607 |
| MvaI | CCWGG | 3 cut(s) | 1472, 1539, 2457 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 470, 2176, 2346, 2555 |
| NaeI | GCCGGC | 1 cut(s) | 2238 |
| NdeI | CATATG | 1 cut(s) | 1048 |
| NgoMIV | GCCGGC | 1 cut(s) | 2236 |
| NlaIV | GGNNCC | 6 cut(s) | 25, 345, 574, 2642, 2824, 2825 |
| NmuCI | GTSAC | 3 cut(s) | 199, 1024, 2243 |
| NsiI | ATGCAT | 1 cut(s) | 302 |
| NspI | RCATGY | 4 cut(s) | 1019, 1509, 2536, 2766 |
| PaeR7I | CTCGAG | 1 cut(s) | 1005 |
| PciI | ACATGT | 1 cut(s) | 2532 |
| PciSI | GCTCTTC | 2 cut(s) | 1086, 1527 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 224, 2850 |
| PctI | GAATGC | 3 cut(s) | 302, 2160, 2607 |
| PdiI | GCCGGC | 1 cut(s) | 2238 |
| PdmI | GAANNNNTTC | 5 cut(s) | 387, 840, 1080, 1515, 2024 |
| PfeI | GAWTC | 7 cut(s) | 138, 289, 990, 1660, 1945, 1999, 2630 |
| PflFI | GACNNNGTC | 1 cut(s) | 1548 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 124 |
| PfoI | TCCNGGA | 1 cut(s) | 2455 |
| PkrI | GCNGC | 5 cut(s) | 374, 1698, 1920, 2888, 2953 |
| Ple19I | CGATCG | 1 cut(s) | 231 |
| PleI | GAGTC | 3 cut(s) | 1992, 2118, 2495 |
| PpsI | GAGTC | 3 cut(s) | 1992, 2118, 2495 |
| PscI | ACATGT | 1 cut(s) | 2532 |
| PsiI | TTATAA | 1 cut(s) | 1910 |
| Psp124BI | GAGCTC | 1 cut(s) | 198 |
| Psp6I | CCWGG | 3 cut(s) | 1470, 1537, 2455 |
| PspEI | GGTNACC | 1 cut(s) | 2260 |
| PspFI | CCCAGC | 1 cut(s) | 955 |
| PspGI | CCWGG | 3 cut(s) | 1470, 1537, 2455 |
| PspN4I | GGNNCC | 6 cut(s) | 25, 345, 574, 2642, 2824, 2825 |
| PspOMI | GGGCCC | 1 cut(s) | 2823 |
| PspPI | GGNCC | 4 cut(s) | 1730, 2640, 2823, 2824 |
| PstI | CTGCAG | 1 cut(s) | 2998 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2510 |
| PsuI | RGATCY | 3 cut(s) | 343, 720, 2296 |
| PsyI | GACNNNGTC | 1 cut(s) | 1548 |
| PvuI | CGATCG | 1 cut(s) | 231 |
| RsaI | GTAC | 5 cut(s) | 500, 1020, 2275, 2356, 2568 |
| RsaNI | GTAC | 5 cut(s) | 499, 1019, 2274, 2355, 2567 |
| SacI | GAGCTC | 1 cut(s) | 198 |
| SapI | GCTCTTC | 2 cut(s) | 1086, 1527 |
| SaqAI | TTAA | 8 cut(s) | 452, 1158, 1188, 1451, 1938, 2045, 2252, 2660 |
| SatI | GCNGC | 5 cut(s) | 373, 1697, 1919, 2887, 2952 |
| Sau96I | GGNCC | 4 cut(s) | 1730, 2640, 2823, 2824 |
| SchI | GAGTC | 3 cut(s) | 1993, 2118, 2495 |
| ScrFI | CCNGG | 3 cut(s) | 1472, 1539, 2457 |
| SduI | GDGCHC | 4 cut(s) | 14, 198, 2560, 2827 |
| SexAI | ACCWGGT | 1 cut(s) | 1470 |
| SfaNI | GCATC | 6 cut(s) | 436, 559, 753, 1964, 2362, 2799 |
| SfcI | CTRYAG | 2 cut(s) | 1105, 2994 |
| Sfr274I | CTCGAG | 1 cut(s) | 1005 |
| SinI | GGWCC | 1 cut(s) | 2640 |
| SlaI | CTCGAG | 1 cut(s) | 1005 |
| SmlI | CTYRAG | 5 cut(s) | 1005, 1753, 1937, 2350, 2411 |
| SmoI | CTYRAG | 5 cut(s) | 1005, 1753, 1937, 2350, 2411 |
| SpeI | ACTAGT | 2 cut(s) | 1021, 1387 |
| SsiI | CCGC | 6 cut(s) | 91, 902, 1354, 2234, 2404, 2664 |
| SspI | AATATT | 3 cut(s) | 1287, 1849, 2987 |
| SspMI | CTAG | 8 cut(s) | 293, 555, 707, 791, 911, 1022, 1388, 2376 |
| SstI | GAGCTC | 1 cut(s) | 198 |
| StyD4I | CCNGG | 3 cut(s) | 1470, 1537, 2455 |
| StyI | CCWWGG | 3 cut(s) | 784, 2625, 2636 |
| TaaI | ACNGT | 8 cut(s) | 282, 537, 565, 1397, 2060, 2115, 2359, 2750 |
| TaiI | ACGT | 1 cut(s) | 63 |
| TaqI | TCGA | 3 cut(s) | 210, 218, 1006 |
| TatI | WGTACW | 2 cut(s) | 1018, 2273 |
| TfiI | GAWTC | 7 cut(s) | 138, 289, 990, 1660, 1945, 1999, 2630 |
| Tru1I | TTAA | 8 cut(s) | 452, 1158, 1188, 1451, 1938, 2045, 2252, 2660 |
| Tru9I | TTAA | 8 cut(s) | 452, 1158, 1188, 1451, 1938, 2045, 2252, 2660 |
| TscAI | CASTG | 2 cut(s) | 2120, 2400 |
| TseFI | GTSAC | 3 cut(s) | 199, 1024, 2243 |
| TseI | GCWGC | 5 cut(s) | 372, 1696, 1918, 2886, 2951 |
| Tsp45I | GTSAC | 3 cut(s) | 199, 1024, 2243 |
| TspGWI | ACGGA | 3 cut(s) | 119, 1167, 2432 |
| TspRI | CASTG | 2 cut(s) | 2120, 2400 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1548 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 124 |
| Vha464I | CTTAAG | 1 cut(s) | 1937 |
| VpaK11BI | GGWCC | 1 cut(s) | 2640 |
| XapI | RAATTY | 5 cut(s) | 810, 1234, 1329, 2079, 2466 |
| XbaI | TCTAGA | 1 cut(s) | 292 |
| XceI | RCATGY | 4 cut(s) | 1019, 1509, 2536, 2766 |
| XhoI | CTCGAG | 1 cut(s) | 1005 |
| XmiI | GTMKAC | 1 cut(s) | 1392 |
| XmnI | GAANNNNTTC | 5 cut(s) | 387, 840, 1080, 1515, 2024 |
| XspI | CTAG | 8 cut(s) | 293, 555, 707, 791, 911, 1022, 1388, 2376 |
| Zsp2I | ATGCAT | 1 cut(s) | 302 |