TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Ribosomal_L4 | PF00573 | 74 - 254 | 2.2e-55 | Ribosomal protein L4/L1 family |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 275 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 423 |
| AccBSI | CCGCTC | 1 cut(s) | 379 |
| AccII | CGCG | 6 cut(s) | 225, 240, 273, 297, 485, 569 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 301, 313, 392, 417, 423 |
| AgsI | TTSAA | 3 cut(s) | 670, 712, 757 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 199 |
| AjnI | CCWGG | 3 cut(s) | 353, 416, 683 |
| AleI | CACNNNNGTG | 1 cut(s) | 500 |
| AluBI | AGCT | 4 cut(s) | 96, 136, 643, 842 |
| AluI | AGCT | 4 cut(s) | 96, 136, 643, 842 |
| Alw21I | GWGCWC | 1 cut(s) | 138 |
| Alw26I | GTCTC | 3 cut(s) | 176, 734, 782 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 423 |
| AoxI | GGCC | 2 cut(s) | 351, 407 |
| ApaI | GGGCCC | 1 cut(s) | 411 |
| ApeKI | GCWGC | 1 cut(s) | 866 |
| AspLEI | GCGC | 4 cut(s) | 227, 242, 270, 485 |
| AspS9I | GGNCC | 5 cut(s) | 304, 351, 372, 407, 408 |
| AsuC2I | CCSGG | 2 cut(s) | 370, 387 |
| AsuHPI | GGTGA | 5 cut(s) | 22, 99, 154, 283, 649 |
| AsuII | TTCGAA | 1 cut(s) | 780 |
| AvaII | GGWCC | 2 cut(s) | 304, 372 |
| BaeGI | GKGCMC | 1 cut(s) | 411 |
| BanI | GGYRCC | 1 cut(s) | 275 |
| BanII | GRGCYC | 2 cut(s) | 138, 411 |
| BbsI | GAAGAC | 3 cut(s) | 347, 554, 608 |
| Bbv12I | GWGCWC | 1 cut(s) | 138 |
| BccI | CCATC | 1 cut(s) | 797 |
| BceAI | ACGGC | 2 cut(s) | 212, 486 |
| BciT130I | CCWGG | 3 cut(s) | 355, 418, 685 |
| BcnI | CCSGG | 2 cut(s) | 370, 387 |
| BcoDI | GTCTC | 3 cut(s) | 176, 734, 782 |
| BfoI | RGCGCY | 1 cut(s) | 271 |
| BisI | GCNGC | 7 cut(s) | 271, 274, 298, 455, 486, 567, 867 |
| BlsI | GCNGC | 7 cut(s) | 272, 275, 299, 456, 487, 568, 868 |
| Bme1390I | CCNGG | 5 cut(s) | 355, 370, 387, 418, 685 |
| Bme18I | GGWCC | 2 cut(s) | 304, 372 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 199 |
| BmgT120I | GGNCC | 5 cut(s) | 304, 351, 372, 407, 408 |
| BmiI | GGNNCC | 3 cut(s) | 277, 374, 409 |
| BmrFI | CCNGG | 5 cut(s) | 355, 370, 387, 418, 685 |
| BmsI | GCATC | 3 cut(s) | 438, 802, 853 |
| BpiI | GAAGAC | 3 cut(s) | 347, 554, 608 |
| BpmI | CTGGAG | 3 cut(s) | 242, 445, 641 |
| Bpu14I | TTCGAA | 1 cut(s) | 780 |
| BpuEI | CTTGAG | 1 cut(s) | 182 |
| BpuMI | CCSGG | 2 cut(s) | 370, 387 |
| BsaI | GGTCTC | 1 cut(s) | 176 |
| BsaJI | CCNNGG | 7 cut(s) | 271, 295, 307, 416, 417, 594, 683 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 384, 414 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 301, 313, 392, 417, 423 |
| Bse118I | RCCGGY | 1 cut(s) | 164 |
| Bse1I | ACTGG | 1 cut(s) | 428 |
| Bse3DI | GCAATG | 1 cut(s) | 561 |
| BseBI | CCWGG | 3 cut(s) | 355, 418, 685 |
| BseDI | CCNNGG | 7 cut(s) | 271, 295, 307, 416, 417, 594, 683 |
| BseGI | GGATG | 3 cut(s) | 802, 808, 856 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 301, 313, 392, 417, 423 |
| BseMI | GCAATG | 1 cut(s) | 561 |
| BseMII | CTCAG | 2 cut(s) | 100, 783 |
| BseNI | ACTGG | 1 cut(s) | 428 |
| BseRI | GAGGAG | 3 cut(s) | 25, 74, 408 |
| BseSI | GKGCMC | 1 cut(s) | 411 |
| BseYI | CCCAGC | 1 cut(s) | 92 |
| Bsh1236I | CGCG | 6 cut(s) | 225, 240, 273, 297, 485, 569 |
| BshFI | GGCC | 2 cut(s) | 353, 409 |
| BshNI | GGYRCC | 1 cut(s) | 275 |
| BsiHKAI | GWGCWC | 1 cut(s) | 138 |
| BsiSI | CCGG | 4 cut(s) | 165, 370, 387, 737 |
| BslFI | GGGAC | 2 cut(s) | 434, 676 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 301, 313, 392, 417, 423 |
| BsmAI | GTCTC | 3 cut(s) | 176, 734, 782 |
| BsmBI | CGTCTC | 1 cut(s) | 734 |
| BsmFI | GGGAC | 2 cut(s) | 434, 676 |
| BsmI | GAATGC | 1 cut(s) | 718 |
| BsnI | GGCC | 2 cut(s) | 353, 409 |
| Bso31I | GGTCTC | 1 cut(s) | 176 |
| Bsp119I | TTCGAA | 1 cut(s) | 780 |
| Bsp120I | GGGCCC | 1 cut(s) | 407 |
| Bsp1286I | GDGCHC | 2 cut(s) | 138, 411 |
| BspANI | GGCC | 2 cut(s) | 353, 409 |
| BspCNI | CTCAG | 2 cut(s) | 99, 784 |
| BspFNI | CGCG | 6 cut(s) | 225, 240, 273, 297, 485, 569 |
| BspLI | GGNNCC | 3 cut(s) | 277, 374, 409 |
| BspT104I | TTCGAA | 1 cut(s) | 780 |
| BspT107I | GGYRCC | 1 cut(s) | 275 |
| BspTNI | GGTCTC | 1 cut(s) | 176 |
| BsrBI | CCGCTC | 1 cut(s) | 379 |
| BsrDI | GCAATG | 1 cut(s) | 561 |
| BsrFI | RCCGGY | 1 cut(s) | 164 |
| BsrI | ACTGG | 1 cut(s) | 428 |
| BssAI | RCCGGY | 1 cut(s) | 164 |
| BssECI | CCNNGG | 7 cut(s) | 271, 295, 307, 416, 417, 594, 683 |
| BssT1I | CCWWGG | 1 cut(s) | 594 |
| Bst2UI | CCWGG | 3 cut(s) | 355, 418, 685 |
| Bst4CI | ACNGT | 1 cut(s) | 745 |
| Bst6I | CTCTTC | 2 cut(s) | 61, 569 |
| BstBI | TTCGAA | 1 cut(s) | 780 |
| BstC8I | GCNNGC | 4 cut(s) | 138, 223, 459, 481 |
| BstDEI | CTNAG | 2 cut(s) | 86, 792 |
| BstDSI | CCRYGG | 2 cut(s) | 271, 295 |
| BstF5I | GGATG | 3 cut(s) | 802, 808, 856 |
| BstFNI | CGCG | 6 cut(s) | 225, 240, 273, 297, 485, 569 |
| BstH2I | RGCGCY | 1 cut(s) | 271 |
| BstHHI | GCGC | 4 cut(s) | 227, 242, 270, 485 |
| BstMAI | GTCTC | 3 cut(s) | 176, 734, 782 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 137, 331, 485 |
| BstNI | CCWGG | 3 cut(s) | 355, 418, 685 |
| BstSCI | CCNGG | 5 cut(s) | 353, 368, 385, 416, 683 |
| BstSLI | GKGCMC | 1 cut(s) | 411 |
| BstUI | CGCG | 6 cut(s) | 225, 240, 273, 297, 485, 569 |
| BstV2I | GAAGAC | 3 cut(s) | 347, 554, 608 |
| BsuRI | GGCC | 2 cut(s) | 353, 409 |
| BtgI | CCRYGG | 2 cut(s) | 271, 295 |
| BtgZI | GCGATG | 2 cut(s) | 534, 584 |
| BtsCI | GGATG | 3 cut(s) | 802, 808, 856 |
| Cac8I | GCNNGC | 4 cut(s) | 138, 223, 459, 481 |
| CaiI | CAGNNNCTG | 1 cut(s) | 423 |
| CfoI | GCGC | 4 cut(s) | 227, 242, 270, 485 |
| Cfr10I | RCCGGY | 1 cut(s) | 164 |
| Cfr13I | GGNCC | 5 cut(s) | 304, 351, 372, 407, 408 |
| Cfr42I | CCGCGG | 2 cut(s) | 274, 298 |
| CseI | GACGC | 1 cut(s) | 697 |
| DdeI | CTNAG | 2 cut(s) | 86, 792 |
| DriI | GACNNNNNGTC | 1 cut(s) | 199 |
| Eam1104I | CTCTTC | 2 cut(s) | 61, 569 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 199 |
| EarI | CTCTTC | 2 cut(s) | 61, 569 |
| EciI | GGCGGA | 3 cut(s) | 193, 405, 503 |
| Ecl136II | GAGCTC | 1 cut(s) | 136 |
| Eco130I | CCWWGG | 1 cut(s) | 594 |
| Eco24I | GRGCYC | 2 cut(s) | 138, 411 |
| Eco31I | GGTCTC | 1 cut(s) | 176 |
| Eco47I | GGWCC | 2 cut(s) | 304, 372 |
| Eco53kI | GAGCTC | 1 cut(s) | 136 |
| EcoICRI | GAGCTC | 1 cut(s) | 136 |
| EcoRII | CCWGG | 3 cut(s) | 353, 416, 683 |
| EcoT14I | CCWWGG | 1 cut(s) | 594 |
| EcoT38I | GRGCYC | 2 cut(s) | 138, 411 |
| ErhI | CCWWGG | 1 cut(s) | 594 |
| Esp3I | CGTCTC | 1 cut(s) | 734 |
| FaiI | YATR | 2 cut(s) | 617, 768 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 593, 625 |
| FaqI | GGGAC | 2 cut(s) | 434, 676 |
| FauI | CCCGC | 5 cut(s) | 230, 302, 305, 339, 384 |
| Fnu4HI | GCNGC | 7 cut(s) | 271, 274, 298, 455, 486, 567, 867 |
| FokI | GGATG | 3 cut(s) | 809, 815, 863 |
| FriOI | GRGCYC | 2 cut(s) | 138, 411 |
| Fsp4HI | GCNGC | 7 cut(s) | 271, 274, 298, 455, 486, 567, 867 |
| GlaI | GCGC | 4 cut(s) | 226, 241, 269, 484 |
| GluI | GCNGC | 7 cut(s) | 271, 274, 298, 455, 486, 567, 867 |
| GsaI | CCCAGC | 1 cut(s) | 96 |
| GsuI | CTGGAG | 3 cut(s) | 242, 445, 641 |
| HaeII | RGCGCY | 1 cut(s) | 271 |
| HaeIII | GGCC | 2 cut(s) | 353, 409 |
| HapII | CCGG | 4 cut(s) | 165, 370, 387, 737 |
| HgaI | GACGC | 1 cut(s) | 697 |
| HhaI | GCGC | 4 cut(s) | 227, 242, 270, 485 |
| Hin6I | GCGC | 4 cut(s) | 225, 240, 268, 483 |
| HinP1I | GCGC | 4 cut(s) | 225, 240, 268, 483 |
| HincII | GTYRAC | 1 cut(s) | 678 |
| HindII | GTYRAC | 1 cut(s) | 678 |
| HindIII | AAGCTT | 1 cut(s) | 641 |
| HinfI | GANTC | 3 cut(s) | 396, 694, 727 |
| HpaII | CCGG | 4 cut(s) | 165, 370, 387, 737 |
| HphI | GGTGA | 5 cut(s) | 22, 99, 154, 283, 649 |
| Hpy166II | GTNNAC | 3 cut(s) | 235, 678, 748 |
| Hpy188I | TCNGA | 4 cut(s) | 89, 308, 383, 862 |
| Hpy188III | TCNNGA | 2 cut(s) | 259, 433 |
| Hpy8I | GTNNAC | 3 cut(s) | 235, 678, 748 |
| Hpy99I | CGWCG | 3 cut(s) | 233, 472, 556 |
| HpyAV | CCTTC | 8 cut(s) | 34, 169, 196, 619, 756, 776, 821, 830 |
| HpyCH4III | ACNGT | 1 cut(s) | 745 |
| HpyCH4V | TGCA | 2 cut(s) | 815, 866 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 137, 331, 485 |
| HpyF3I | CTNAG | 2 cut(s) | 86, 792 |
| HspAI | GCGC | 4 cut(s) | 225, 240, 268, 483 |
| KspI | CCGCGG | 2 cut(s) | 274, 298 |
| LmnI | GCTCC | 4 cut(s) | 101, 384, 426, 839 |
| LweI | GCATC | 3 cut(s) | 438, 802, 853 |
| MbiI | CCGCTC | 1 cut(s) | 379 |
| MhlI | GDGCHC | 2 cut(s) | 138, 411 |
| MlyI | GAGTC | 1 cut(s) | 405 |
| MmeI | TCCRAC | 2 cut(s) | 406, 516 |
| MseI | TTAA | 1 cut(s) | 438 |
| MslI | CAYNNNNRTG | 1 cut(s) | 500 |
| MspA1I | CMGCKG | 2 cut(s) | 273, 297 |
| MspI | CCGG | 4 cut(s) | 165, 370, 387, 737 |
| MspR9I | CCNGG | 5 cut(s) | 355, 370, 387, 418, 685 |
| Mva1269I | GAATGC | 1 cut(s) | 718 |
| MvaI | CCWGG | 3 cut(s) | 355, 418, 685 |
| MvnI | CGCG | 6 cut(s) | 225, 240, 273, 297, 485, 569 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 137, 331, 485 |
| NciI | CCSGG | 2 cut(s) | 370, 387 |
| NlaIV | GGNNCC | 3 cut(s) | 277, 374, 409 |
| NmeAIII | GCCGAG | 1 cut(s) | 157 |
| NspV | TTCGAA | 1 cut(s) | 780 |
| OliI | CACNNNNGTG | 1 cut(s) | 500 |
| PasI | CCCWGGG | 1 cut(s) | 417 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 476 |
| PctI | GAATGC | 1 cut(s) | 718 |
| PfeI | GAWTC | 2 cut(s) | 694, 727 |
| PflFI | GACNNNGTC | 1 cut(s) | 173 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 423 |
| PkrI | GCNGC | 7 cut(s) | 272, 275, 299, 456, 487, 568, 868 |
| PleI | GAGTC | 1 cut(s) | 404 |
| PpsI | GAGTC | 1 cut(s) | 404 |
| Psp124BI | GAGCTC | 1 cut(s) | 138 |
| Psp6I | CCWGG | 3 cut(s) | 353, 416, 683 |
| PspFI | CCCAGC | 1 cut(s) | 92 |
| PspGI | CCWGG | 3 cut(s) | 353, 416, 683 |
| PspN4I | GGNNCC | 3 cut(s) | 277, 374, 409 |
| PspOMI | GGGCCC | 1 cut(s) | 407 |
| PspPI | GGNCC | 5 cut(s) | 304, 351, 372, 407, 408 |
| PstNI | CAGNNNCTG | 1 cut(s) | 423 |
| PsyI | GACNNNGTC | 1 cut(s) | 173 |
| RseI | CAYNNNNRTG | 1 cut(s) | 500 |
| SacI | GAGCTC | 1 cut(s) | 138 |
| SacII | CCGCGG | 2 cut(s) | 274, 298 |
| SaqAI | TTAA | 1 cut(s) | 438 |
| SatI | GCNGC | 7 cut(s) | 271, 274, 298, 455, 486, 567, 867 |
| Sau96I | GGNCC | 5 cut(s) | 304, 351, 372, 407, 408 |
| SchI | GAGTC | 1 cut(s) | 405 |
| ScrFI | CCNGG | 5 cut(s) | 355, 370, 387, 418, 685 |
| SduI | GDGCHC | 2 cut(s) | 138, 411 |
| SfaNI | GCATC | 3 cut(s) | 438, 802, 853 |
| Sfr303I | CCGCGG | 2 cut(s) | 274, 298 |
| SfuI | TTCGAA | 1 cut(s) | 780 |
| SgrAI | CRCCGGYG | 1 cut(s) | 164 |
| SgrBI | CCGCGG | 2 cut(s) | 274, 298 |
| SinI | GGWCC | 2 cut(s) | 304, 372 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 500 |
| SmlI | CTYRAG | 1 cut(s) | 197 |
| SmoI | CTYRAG | 1 cut(s) | 197 |
| SspI | AATATT | 1 cut(s) | 658 |
| SstI | GAGCTC | 1 cut(s) | 138 |
| StyD4I | CCNGG | 5 cut(s) | 353, 368, 385, 416, 683 |
| StyI | CCWWGG | 1 cut(s) | 594 |
| TaaI | ACNGT | 1 cut(s) | 745 |
| TaqI | TCGA | 5 cut(s) | 192, 365, 467, 647, 780 |
| TauI | GCSGC | 6 cut(s) | 273, 276, 300, 457, 488, 569 |
| TfiI | GAWTC | 2 cut(s) | 694, 727 |
| Tru1I | TTAA | 1 cut(s) | 438 |
| Tru9I | TTAA | 1 cut(s) | 438 |
| TseI | GCWGC | 1 cut(s) | 866 |
| TspDTI | ATGAA | 2 cut(s) | 550, 587 |
| TspGWI | ACGGA | 1 cut(s) | 569 |
| Tth111I | GACNNNGTC | 1 cut(s) | 173 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 423 |
| VpaK11BI | GGWCC | 2 cut(s) | 304, 372 |