TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 24 - 206 | 4.1e-50 | TIR domain |
| TIR_2 | PF13676 | 27 - 124 | 1.7e-16 | TIR domain |
| NB-ARC | PF00931 | 213 - 381 | 2.1e-19 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 448 - 519 | 2.6e-10 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_RPS2 | PF23247 | 658 - 789 | 1e-07 | Plant disease resistance protein RPS2-like, leucine-rich repeats |
| LRR_13 | PF23286 | 708 - 793 | 1.1e-06 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 739 - 831 | 1.2e-08 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 841 - 940 | 5.8e-09 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 862 - 957 | 7.1e-08 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| C-JID | PF20160 | 1016 - 1141 | 2.5e-13 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1793 |
| AccB1I | GGYRCC | 2 cut(s) | 1097, 1678 |
| AccB7I | CCANNNNNTGG | 4 cut(s) | 2180, 3088, 3184, 3200 |
| AccI | GTMKAC | 4 cut(s) | 102, 1482, 1570, 2719 |
| AciI | CCGC | 7 cut(s) | 109, 565, 1411, 1661, 2441, 2524, 2770 |
| AclI | AACGTT | 2 cut(s) | 786, 873 |
| AclWI | GGATC | 6 cut(s) | 963, 2406, 2418, 3011, 3164, 3256 |
| AcoI | YGGCCR | 2 cut(s) | 1658, 3186 |
| AcuI | CTGAAG | 2 cut(s) | 1578, 1740 |
| AcyI | GRCGYC | 2 cut(s) | 392, 2737 |
| AjnI | CCWGG | 3 cut(s) | 61, 1564, 2386 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 979, 1011, 1780, 1812 |
| Alw21I | GWGCWC | 1 cut(s) | 20 |
| Alw26I | GTCTC | 4 cut(s) | 353, 1985, 2343, 2385 |
| AlwI | GGATC | 6 cut(s) | 963, 2406, 2418, 3011, 3164, 3256 |
| Ama87I | CYCGRG | 2 cut(s) | 635, 1783 |
| AoxI | GGCC | 6 cut(s) | 1198, 1658, 1759, 2266, 2515, 3186 |
| ApeKI | GCWGC | 3 cut(s) | 2151, 2667, 2880 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1412, 1444 |
| AseI | ATTAAT | 3 cut(s) | 1185, 1956, 2958 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 625 |
| AspS9I | GGNCC | 3 cut(s) | 1760, 2515, 3491 |
| AsuHPI | GGTGA | 3 cut(s) | 469, 2024, 2881 |
| AsuII | TTCGAA | 1 cut(s) | 512 |
| AsuNHI | GCTAGC | 1 cut(s) | 3503 |
| AvaI | CYCGRG | 2 cut(s) | 635, 1783 |
| AvaII | GGWCC | 1 cut(s) | 3491 |
| AxyI | CCTNAGG | 1 cut(s) | 1149 |
| BaeGI | GKGCMC | 1 cut(s) | 1683 |
| BalI | TGGCCA | 1 cut(s) | 3188 |
| BanI | GGYRCC | 2 cut(s) | 1097, 1678 |
| BanII | GRGCYC | 1 cut(s) | 3397 |
| BbsI | GAAGAC | 5 cut(s) | 450, 742, 818, 1221, 2574 |
| Bbv12I | GWGCWC | 1 cut(s) | 20 |
| BbvI | GCAGC | 3 cut(s) | 2163, 2654, 2892 |
| BceAI | ACGGC | 1 cut(s) | 1673 |
| BciT130I | CCWGG | 3 cut(s) | 63, 1566, 2388 |
| BciVI | GTATCC | 2 cut(s) | 133, 499 |
| BcoDI | GTCTC | 4 cut(s) | 353, 1985, 2343, 2385 |
| BfuI | GTATCC | 2 cut(s) | 133, 499 |
| BglII | AGATCT | 2 cut(s) | 470, 2467 |
| BisI | GCNGC | 5 cut(s) | 1661, 2152, 2441, 2668, 2881 |
| BlpI | GCTNAGC | 1 cut(s) | 729 |
| BlsI | GCNGC | 5 cut(s) | 1662, 2153, 2442, 2669, 2882 |
| BmcAI | AGTACT | 1 cut(s) | 978 |
| Bme1390I | CCNGG | 3 cut(s) | 63, 1566, 2388 |
| Bme18I | GGWCC | 1 cut(s) | 3491 |
| BmeT110I | CYCGRG | 2 cut(s) | 635, 1783 |
| BmgT120I | GGNCC | 3 cut(s) | 1760, 2515, 3491 |
| BmiI | GGNNCC | 4 cut(s) | 1099, 1680, 1762, 2516 |
| BmrFI | CCNGG | 3 cut(s) | 63, 1566, 2388 |
| BmrI | ACTGGG | 2 cut(s) | 457, 705 |
| BmsI | GCATC | 7 cut(s) | 245, 1404, 1497, 1701, 2354, 2876, 3019 |
| BmtI | GCTAGC | 1 cut(s) | 3507 |
| BmuI | ACTGGG | 2 cut(s) | 457, 705 |
| BpiI | GAAGAC | 5 cut(s) | 450, 742, 818, 1221, 2574 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2536, 2568 |
| BpmI | CTGGAG | 2 cut(s) | 195, 1215 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 729 |
| Bpu14I | TTCGAA | 1 cut(s) | 512 |
| BpuEI | CTTGAG | 4 cut(s) | 1130, 2009, 2735, 2956 |
| BsaAI | YACGTR | 1 cut(s) | 2824 |
| BsaBI | GATNNNNATC | 1 cut(s) | 954 |
| BsaHI | GRCGYC | 2 cut(s) | 392, 2737 |
| BsaJI | CCNNGG | 3 cut(s) | 154, 2315, 2386 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 828, 858 |
| Bse118I | RCCGGY | 1 cut(s) | 346 |
| Bse1I | ACTGG | 4 cut(s) | 463, 700, 3140, 3205 |
| Bse21I | CCTNAGG | 1 cut(s) | 1149 |
| Bse3DI | GCAATG | 2 cut(s) | 2914, 2928 |
| Bse8I | GATNNNNATC | 1 cut(s) | 954 |
| BseBI | CCWGG | 3 cut(s) | 63, 1566, 2388 |
| BseDI | CCNNGG | 3 cut(s) | 154, 2315, 2386 |
| BseGI | GGATG | 8 cut(s) | 71, 705, 1419, 1512, 2369, 2554, 2843, 2867 |
| BseJI | GATNNNNATC | 1 cut(s) | 954 |
| BseMI | GCAATG | 2 cut(s) | 2914, 2928 |
| BseMII | CTCAG | 3 cut(s) | 405, 1140, 1712 |
| BseNI | ACTGG | 4 cut(s) | 463, 700, 3140, 3205 |
| BseRI | GAGGAG | 1 cut(s) | 1930 |
| BseSI | GKGCMC | 1 cut(s) | 1683 |
| BseX3I | CGGCCG | 1 cut(s) | 1658 |
| BseXI | GCAGC | 3 cut(s) | 2163, 2654, 2892 |
| BseYI | CCCAGC | 1 cut(s) | 3139 |
| BsgI | GTGCAG | 4 cut(s) | 615, 1109, 1364, 3384 |
| Bsh1285I | CGRYCG | 3 cut(s) | 181, 1661, 2232 |
| BshFI | GGCC | 6 cut(s) | 1200, 1660, 1761, 2268, 2517, 3188 |
| BshNI | GGYRCC | 2 cut(s) | 1097, 1678 |
| BsiEI | CGRYCG | 3 cut(s) | 181, 1661, 2232 |
| BsiHKAI | GWGCWC | 1 cut(s) | 20 |
| BsiHKCI | CYCGRG | 2 cut(s) | 635, 1783 |
| BsiSI | CCGG | 1 cut(s) | 347 |
| BslFI | GGGAC | 1 cut(s) | 2236 |
| BsmAI | GTCTC | 4 cut(s) | 353, 1985, 2343, 2385 |
| BsmBI | CGTCTC | 1 cut(s) | 1985 |
| BsmFI | GGGAC | 1 cut(s) | 2236 |
| BsmI | GAATGC | 2 cut(s) | 508, 2045 |
| BsnI | GGCC | 6 cut(s) | 1200, 1660, 1761, 2268, 2517, 3188 |
| BsoBI | CYCGRG | 2 cut(s) | 635, 1783 |
| Bsp119I | TTCGAA | 1 cut(s) | 512 |
| Bsp1286I | GDGCHC | 3 cut(s) | 20, 1683, 3397 |
| Bsp1407I | TGTACA | 2 cut(s) | 2840, 3405 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 729 |
| BspACI | CCGC | 7 cut(s) | 109, 565, 1411, 1661, 2441, 2524, 2770 |
| BspANI | GGCC | 6 cut(s) | 1200, 1660, 1761, 2268, 2517, 3188 |
| BspCNI | CTCAG | 3 cut(s) | 406, 1141, 1713 |
| BspHI | TCATGA | 2 cut(s) | 661, 3301 |
| BspLI | GGNNCC | 4 cut(s) | 1099, 1680, 1762, 2516 |
| BspOI | GCTAGC | 1 cut(s) | 3507 |
| BspPI | GGATC | 6 cut(s) | 963, 2406, 2418, 3011, 3164, 3256 |
| BspQI | GCTCTTC | 2 cut(s) | 1554, 3417 |
| BspT104I | TTCGAA | 1 cut(s) | 512 |
| BspT107I | GGYRCC | 2 cut(s) | 1097, 1678 |
| BsrDI | GCAATG | 2 cut(s) | 2914, 2928 |
| BsrFI | RCCGGY | 1 cut(s) | 346 |
| BsrGI | TGTACA | 2 cut(s) | 2840, 3405 |
| BsrI | ACTGG | 4 cut(s) | 463, 700, 3140, 3205 |
| BssAI | RCCGGY | 1 cut(s) | 346 |
| BssECI | CCNNGG | 3 cut(s) | 154, 2315, 2386 |
| BssNAI | GTATAC | 1 cut(s) | 1483 |
| BssNI | GRCGYC | 2 cut(s) | 392, 2737 |
| BssT1I | CCWWGG | 2 cut(s) | 154, 2315 |
| Bst1107I | GTATAC | 1 cut(s) | 1483 |
| Bst2UI | CCWGG | 3 cut(s) | 63, 1566, 2388 |
| Bst4CI | ACNGT | 3 cut(s) | 1170, 1303, 3009 |
| Bst6I | CTCTTC | 7 cut(s) | 37, 1346, 1545, 1554, 1668, 2805, 3417 |
| BstACI | GRCGYC | 2 cut(s) | 392, 2737 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2925 |
| BstAUI | TGTACA | 2 cut(s) | 2840, 3405 |
| BstBAI | YACGTR | 1 cut(s) | 2824 |
| BstBI | TTCGAA | 1 cut(s) | 512 |
| BstC8I | GCNNGC | 7 cut(s) | 563, 579, 590, 1124, 1128, 3480, 3505 |
| BstEII | GGTNACC | 1 cut(s) | 457 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2851 |
| BstF5I | GGATG | 8 cut(s) | 71, 705, 1419, 1512, 2369, 2554, 2843, 2867 |
| BstMAI | GTCTC | 4 cut(s) | 353, 1985, 2343, 2385 |
| BstMCI | CGRYCG | 3 cut(s) | 181, 1661, 2232 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 233, 398, 665, 1054, 1643, 2097, 2523, 2736, 2925 |
| BstNI | CCWGG | 3 cut(s) | 63, 1566, 2388 |
| BstNSI | RCATGY | 2 cut(s) | 588, 1867 |
| BstPI | GGTNACC | 1 cut(s) | 457 |
| BstSCI | CCNGG | 3 cut(s) | 61, 1564, 2386 |
| BstSLI | GKGCMC | 1 cut(s) | 1683 |
| BstSNI | TACGTA | 1 cut(s) | 2824 |
| BstV1I | GCAGC | 3 cut(s) | 2163, 2654, 2892 |
| BstV2I | GAAGAC | 5 cut(s) | 450, 742, 818, 1221, 2574 |
| BstX2I | RGATCY | 5 cut(s) | 470, 2410, 2467, 3016, 3169 |
| BstYI | RGATCY | 5 cut(s) | 470, 2410, 2467, 3016, 3169 |
| BstZ17I | GTATAC | 1 cut(s) | 1483 |
| BstZI | CGGCCG | 1 cut(s) | 1658 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1149 |
| BsuI | GTATCC | 2 cut(s) | 133, 499 |
| BsuRI | GGCC | 6 cut(s) | 1200, 1660, 1761, 2268, 2517, 3188 |
| BtgZI | GCGATG | 1 cut(s) | 222 |
| BtsCI | GGATG | 8 cut(s) | 71, 705, 1419, 1512, 2369, 2554, 2843, 2867 |
| BtsI | GCAGTG | 1 cut(s) | 769 |
| BtsIMutI | CAGTG | 4 cut(s) | 411, 470, 769, 1978 |
| Cac8I | GCNNGC | 7 cut(s) | 563, 579, 590, 1124, 1128, 3480, 3505 |
| CciI | TCATGA | 2 cut(s) | 661, 3301 |
| Cfr10I | RCCGGY | 1 cut(s) | 346 |
| Cfr13I | GGNCC | 3 cut(s) | 1760, 2515, 3491 |
| CseI | GACGC | 3 cut(s) | 381, 674, 2745 |
| DraI | TTTAAA | 2 cut(s) | 2479, 3222 |
| EaeI | YGGCCR | 2 cut(s) | 1658, 3186 |
| EagI | CGGCCG | 1 cut(s) | 1658 |
| Eam1104I | CTCTTC | 7 cut(s) | 37, 1346, 1545, 1554, 1668, 2805, 3417 |
| EarI | CTCTTC | 7 cut(s) | 37, 1346, 1545, 1554, 1668, 2805, 3417 |
| EclXI | CGGCCG | 1 cut(s) | 1658 |
| Eco105I | TACGTA | 1 cut(s) | 2824 |
| Eco130I | CCWWGG | 2 cut(s) | 154, 2315 |
| Eco147I | AGGCCT | 1 cut(s) | 1200 |
| Eco24I | GRGCYC | 1 cut(s) | 3397 |
| Eco32I | GATATC | 1 cut(s) | 2650 |
| Eco47I | GGWCC | 1 cut(s) | 3491 |
| Eco52I | CGGCCG | 1 cut(s) | 1658 |
| Eco57I | CTGAAG | 2 cut(s) | 1578, 1740 |
| Eco81I | CCTNAGG | 1 cut(s) | 1149 |
| Eco88I | CYCGRG | 2 cut(s) | 635, 1783 |
| Eco91I | GGTNACC | 1 cut(s) | 457 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2851 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1760, 2515 |
| EcoO65I | GGTNACC | 1 cut(s) | 457 |
| EcoRI | GAATTC | 1 cut(s) | 1733 |
| EcoRII | CCWGG | 3 cut(s) | 61, 1564, 2386 |
| EcoRV | GATATC | 1 cut(s) | 2650 |
| EcoT14I | CCWWGG | 2 cut(s) | 154, 2315 |
| EcoT22I | ATGCAT | 4 cut(s) | 323, 1512, 1716, 2869 |
| EcoT38I | GRGCYC | 1 cut(s) | 3397 |
| ErhI | CCWWGG | 2 cut(s) | 154, 2315 |
| Esp3I | CGTCTC | 1 cut(s) | 1985 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 16, 48, 899, 931 |
| FaqI | GGGAC | 1 cut(s) | 2236 |
| FauI | CCCGC | 1 cut(s) | 116 |
| FblI | GTMKAC | 4 cut(s) | 102, 1482, 1570, 2719 |
| Fnu4HI | GCNGC | 5 cut(s) | 1661, 2152, 2441, 2668, 2881 |
| FokI | GGATG | 8 cut(s) | 78, 712, 1426, 1519, 2376, 2541, 2830, 2854 |
| FriOI | GRGCYC | 1 cut(s) | 3397 |
| Fsp4HI | GCNGC | 5 cut(s) | 1661, 2152, 2441, 2668, 2881 |
| GluI | GCNGC | 5 cut(s) | 1661, 2152, 2441, 2668, 2881 |
| GsaI | CCCAGC | 1 cut(s) | 3143 |
| GsuI | CTGGAG | 2 cut(s) | 195, 1215 |
| HaeIII | GGCC | 6 cut(s) | 1200, 1660, 1761, 2268, 2517, 3188 |
| HapII | CCGG | 1 cut(s) | 347 |
| HgaI | GACGC | 3 cut(s) | 381, 674, 2745 |
| Hin1I | GRCGYC | 2 cut(s) | 392, 2737 |
| HincII | GTYRAC | 1 cut(s) | 2859 |
| HindII | GTYRAC | 1 cut(s) | 2859 |
| HindIII | AAGCTT | 3 cut(s) | 3110, 3215, 3480 |
| HpaII | CCGG | 1 cut(s) | 347 |
| HphI | GGTGA | 3 cut(s) | 469, 2024, 2881 |
| Hpy188I | TCNGA | 9 cut(s) | 373, 387, 475, 529, 620, 1558, 1594, 1894, 3262 |
| Hpy99I | CGWCG | 3 cut(s) | 1402, 2702, 3476 |
| HpyCH4III | ACNGT | 3 cut(s) | 1170, 1303, 3009 |
| HpyCH4IV | ACGT | 6 cut(s) | 375, 786, 873, 1042, 1994, 2823 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 233, 398, 665, 1054, 1643, 2097, 2523, 2736, 2925 |
| HpySE526I | ACGT | 6 cut(s) | 375, 786, 873, 1042, 1994, 2823 |
| Hsp92I | GRCGYC | 2 cut(s) | 392, 2737 |
| LguI | GCTCTTC | 2 cut(s) | 1554, 3417 |
| LmnI | GCTCC | 3 cut(s) | 15, 64, 2185 |
| Lsp1109I | GCAGC | 3 cut(s) | 2163, 2654, 2892 |
| LweI | GCATC | 7 cut(s) | 245, 1404, 1497, 1701, 2354, 2876, 3019 |
| MaeII | ACGT | 6 cut(s) | 375, 786, 873, 1042, 1994, 2823 |
| MaeIII | GTNAC | 6 cut(s) | 457, 802, 878, 2824, 3077, 3542 |
| MfeI | CAATTG | 4 cut(s) | 556, 1539, 1638, 2250 |
| MflI | RGATCY | 5 cut(s) | 470, 2410, 2467, 3016, 3169 |
| MhlI | GDGCHC | 3 cut(s) | 20, 1683, 3397 |
| MlsI | TGGCCA | 1 cut(s) | 3188 |
| MluNI | TGGCCA | 1 cut(s) | 3188 |
| MlyI | GAGTC | 2 cut(s) | 1562, 2554 |
| MmeI | TCCRAC | 5 cut(s) | 598, 1322, 1977, 3240, 3266 |
| Mox20I | TGGCCA | 1 cut(s) | 3188 |
| Mph1103I | ATGCAT | 4 cut(s) | 323, 1512, 1716, 2869 |
| MroXI | GAANNNNTTC | 1 cut(s) | 625 |
| MscI | TGGCCA | 1 cut(s) | 3188 |
| MslI | CAYNNNNRTG | 1 cut(s) | 3124 |
| Msp20I | TGGCCA | 1 cut(s) | 3188 |
| MspI | CCGG | 1 cut(s) | 347 |
| MspR9I | CCNGG | 3 cut(s) | 63, 1566, 2388 |
| MunI | CAATTG | 4 cut(s) | 556, 1539, 1638, 2250 |
| Mva1269I | GAATGC | 2 cut(s) | 508, 2045 |
| MvaI | CCWGG | 3 cut(s) | 63, 1566, 2388 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 233, 398, 665, 1054, 1643, 2097, 2523, 2736, 2925 |
| NheI | GCTAGC | 1 cut(s) | 3503 |
| NlaIV | GGNNCC | 4 cut(s) | 1099, 1680, 1762, 2516 |
| NmuCI | GTSAC | 2 cut(s) | 457, 878 |
| NsiI | ATGCAT | 4 cut(s) | 323, 1512, 1716, 2869 |
| NspI | RCATGY | 2 cut(s) | 588, 1867 |
| NspV | TTCGAA | 1 cut(s) | 512 |
| PaeR7I | CTCGAG | 2 cut(s) | 635, 1783 |
| PagI | TCATGA | 2 cut(s) | 661, 3301 |
| PceI | AGGCCT | 1 cut(s) | 1200 |
| PciSI | GCTCTTC | 2 cut(s) | 1554, 3417 |
| PctI | GAATGC | 2 cut(s) | 508, 2045 |
| PdmI | GAANNNNTTC | 1 cut(s) | 625 |
| PflFI | GACNNNGTC | 1 cut(s) | 551 |
| PflMI | CCANNNNNTGG | 4 cut(s) | 2180, 3088, 3184, 3200 |
| PfoI | TCCNGGA | 1 cut(s) | 61 |
| PkrI | GCNGC | 5 cut(s) | 1662, 2153, 2442, 2669, 2882 |
| Ple19I | CGATCG | 2 cut(s) | 181, 2232 |
| PleI | GAGTC | 2 cut(s) | 1561, 2553 |
| PpsI | GAGTC | 2 cut(s) | 1561, 2553 |
| Ppu21I | YACGTR | 1 cut(s) | 2824 |
| PshBI | ATTAAT | 3 cut(s) | 1185, 1956, 2958 |
| PsiI | TTATAA | 1 cut(s) | 1793 |
| Psp1406I | AACGTT | 2 cut(s) | 786, 873 |
| Psp6I | CCWGG | 3 cut(s) | 61, 1564, 2386 |
| PspEI | GGTNACC | 1 cut(s) | 457 |
| PspFI | CCCAGC | 1 cut(s) | 3139 |
| PspGI | CCWGG | 3 cut(s) | 61, 1564, 2386 |
| PspN4I | GGNNCC | 4 cut(s) | 1099, 1680, 1762, 2516 |
| PspPI | GGNCC | 3 cut(s) | 1760, 2515, 3491 |
| PspXI | VCTCGAGB | 1 cut(s) | 635 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1009, 1041 |
| PsuI | RGATCY | 5 cut(s) | 470, 2410, 2467, 3016, 3169 |
| PsyI | GACNNNGTC | 1 cut(s) | 551 |
| PvuI | CGATCG | 2 cut(s) | 181, 2232 |
| RseI | CAYNNNNRTG | 1 cut(s) | 3124 |
| SapI | GCTCTTC | 2 cut(s) | 1554, 3417 |
| SatI | GCNGC | 5 cut(s) | 1661, 2152, 2441, 2668, 2881 |
| Sau96I | GGNCC | 3 cut(s) | 1760, 2515, 3491 |
| ScaI | AGTACT | 1 cut(s) | 978 |
| SchI | GAGTC | 2 cut(s) | 1562, 2554 |
| ScrFI | CCNGG | 3 cut(s) | 63, 1566, 2388 |
| SduI | GDGCHC | 3 cut(s) | 20, 1683, 3397 |
| SfaNI | GCATC | 7 cut(s) | 245, 1404, 1497, 1701, 2354, 2876, 3019 |
| Sfr274I | CTCGAG | 2 cut(s) | 635, 1783 |
| SfuI | TTCGAA | 1 cut(s) | 512 |
| SinI | GGWCC | 1 cut(s) | 3491 |
| SlaI | CTCGAG | 2 cut(s) | 635, 1783 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 3124 |
| SmlI | CTYRAG | 6 cut(s) | 635, 1109, 1783, 1988, 2750, 2971 |
| SmoI | CTYRAG | 6 cut(s) | 635, 1109, 1783, 1988, 2750, 2971 |
| SnaBI | TACGTA | 1 cut(s) | 2824 |
| SseBI | AGGCCT | 1 cut(s) | 1200 |
| SsiI | CCGC | 7 cut(s) | 109, 565, 1411, 1661, 2441, 2524, 2770 |
| SspI | AATATT | 3 cut(s) | 865, 2135, 3296 |
| StuI | AGGCCT | 1 cut(s) | 1200 |
| StyD4I | CCNGG | 3 cut(s) | 61, 1564, 2386 |
| StyI | CCWWGG | 2 cut(s) | 154, 2315 |
| TaaI | ACNGT | 3 cut(s) | 1170, 1303, 3009 |
| TaiI | ACGT | 6 cut(s) | 378, 789, 876, 1045, 1997, 2826 |
| TatI | WGTACW | 5 cut(s) | 940, 976, 1459, 2840, 3405 |
| TauI | GCSGC | 2 cut(s) | 1663, 2443 |
| TscAI | CASTG | 4 cut(s) | 418, 470, 776, 1978 |
| TseFI | GTSAC | 2 cut(s) | 457, 878 |
| TseI | GCWGC | 3 cut(s) | 2151, 2667, 2880 |
| Tsp45I | GTSAC | 2 cut(s) | 457, 878 |
| TspGWI | ACGGA | 4 cut(s) | 1415, 2029, 2194, 2715 |
| TspRI | CASTG | 4 cut(s) | 418, 470, 776, 1978 |
| Tth111I | GACNNNGTC | 1 cut(s) | 551 |
| Van91I | CCANNNNNTGG | 4 cut(s) | 2180, 3088, 3184, 3200 |
| VpaK11BI | GGWCC | 1 cut(s) | 3491 |
| VspI | ATTAAT | 3 cut(s) | 1185, 1956, 2958 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2851 |
| XbaI | TCTAGA | 1 cut(s) | 2620 |
| XceI | RCATGY | 2 cut(s) | 588, 1867 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 289 |
| XhoI | CTCGAG | 2 cut(s) | 635, 1783 |
| XmiI | GTMKAC | 4 cut(s) | 102, 1482, 1570, 2719 |
| XmnI | GAANNNNTTC | 1 cut(s) | 625 |
| ZrmI | AGTACT | 1 cut(s) | 978 |
| Zsp2I | ATGCAT | 4 cut(s) | 323, 1512, 1716, 2869 |