TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 18 - 193 | 9.6e-54 | TIR domain |
| TIR_2 | PF13676 | 21 - 116 | 2.8e-13 | TIR domain |
| NB-ARC | PF00931 | 211 - 366 | 6.1e-20 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 435 - 504 | 1.2e-20 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 665 - 751 | 1.7e-10 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 694 - 875 | 1.5e-06 | Disease resistance protein RPS4B-like, leucine-rich repeats |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 863, 1142 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 2520 |
| AatII | GACGTC | 1 cut(s) | 642 |
| Acc36I | ACCTGC | 1 cut(s) | 2139 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1483 |
| AccBSI | CCGCTC | 1 cut(s) | 698 |
| AccI | GTMKAC | 3 cut(s) | 778, 828, 2586 |
| AciI | CCGC | 5 cut(s) | 643, 669, 698, 1504, 2801 |
| AclWI | GGATC | 4 cut(s) | 152, 338, 1914, 2391 |
| AcoI | YGGCCR | 2 cut(s) | 2500, 2619 |
| AcsI | RAATTY | 7 cut(s) | 288, 481, 722, 728, 1046, 1260, 2968 |
| AcuI | CTGAAG | 6 cut(s) | 1128, 1323, 1389, 1611, 1709, 2510 |
| AcyI | GRCGYC | 1 cut(s) | 639 |
| AfaI | GTAC | 5 cut(s) | 9, 321, 1179, 2706, 2780 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 864, 1483, 2891, 2892 |
| AjiI | CACGTC | 1 cut(s) | 1645 |
| AjnI | CCWGG | 1 cut(s) | 2755 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 564, 596, 2781, 2813 |
| Alw26I | GTCTC | 1 cut(s) | 436 |
| AlwI | GGATC | 4 cut(s) | 152, 338, 1914, 2391 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1807 |
| Ama87I | CYCGRG | 2 cut(s) | 1946, 2771 |
| AoxI | GGCC | 4 cut(s) | 1099, 1156, 2500, 2619 |
| ApeKI | GCWGC | 5 cut(s) | 203, 601, 1807, 2918, 2930 |
| ApoI | RAATTY | 7 cut(s) | 288, 481, 722, 728, 1046, 1260, 2968 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2305, 2337 |
| AseI | ATTAAT | 1 cut(s) | 1695 |
| Asp700I | GAANNNNTTC | 5 cut(s) | 1088, 1116, 1316, 2241, 2523 |
| AspS9I | GGNCC | 1 cut(s) | 2821 |
| AsuC2I | CCSGG | 1 cut(s) | 1524 |
| AsuHPI | GGTGA | 3 cut(s) | 2259, 2777, 2995 |
| AsuNHI | GCTAGC | 1 cut(s) | 2591 |
| AvaI | CYCGRG | 2 cut(s) | 1946, 2771 |
| AvaII | GGWCC | 1 cut(s) | 2821 |
| AxyI | CCTNAGG | 1 cut(s) | 1713 |
| BaeGI | GKGCMC | 1 cut(s) | 2205 |
| BalI | TGGCCA | 1 cut(s) | 2621 |
| BbsI | GAAGAC | 5 cut(s) | 642, 1459, 1560, 2051, 2516 |
| BbvI | GCAGC | 5 cut(s) | 190, 613, 1794, 2930, 2942 |
| BccI | CCATC | 3 cut(s) | 1414, 1792, 2578 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1376, 1410 |
| BciT130I | CCWGG | 1 cut(s) | 2757 |
| BciVI | GTATCC | 2 cut(s) | 79, 1776 |
| BcnI | CCSGG | 1 cut(s) | 1524 |
| BcoDI | GTCTC | 1 cut(s) | 436 |
| BfaI | CTAG | 7 cut(s) | 578, 990, 1295, 1322, 2511, 2592, 2985 |
| BfuAI | ACCTGC | 1 cut(s) | 2139 |
| BfuI | GTATCC | 2 cut(s) | 79, 1776 |
| BglII | AGATCT | 2 cut(s) | 1204, 1427 |
| BisI | GCNGC | 5 cut(s) | 204, 602, 1808, 2919, 2931 |
| BlsI | GCNGC | 5 cut(s) | 205, 603, 1809, 2920, 2932 |
| BmcAI | AGTACT | 1 cut(s) | 1179 |
| Bme1390I | CCNGG | 2 cut(s) | 1524, 2757 |
| Bme18I | GGWCC | 1 cut(s) | 2821 |
| BmeT110I | CYCGRG | 2 cut(s) | 1946, 2771 |
| BmgBI | CACGTC | 1 cut(s) | 1645 |
| BmgT120I | GGNCC | 1 cut(s) | 2821 |
| BmiI | GGNNCC | 2 cut(s) | 853, 2822 |
| BmrFI | CCNGG | 2 cut(s) | 1524, 2757 |
| BmrI | ACTGGG | 3 cut(s) | 1190, 1247, 2415 |
| BmsI | GCATC | 5 cut(s) | 147, 1452, 2505, 2905, 2930 |
| BmtI | GCTAGC | 1 cut(s) | 2595 |
| BmuI | ACTGGG | 3 cut(s) | 1190, 1247, 2415 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1647 |
| BpiI | GAAGAC | 5 cut(s) | 642, 1459, 1560, 2051, 2516 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1885, 1917 |
| BpmI | CTGGAG | 2 cut(s) | 174, 1052 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2456 |
| BpuEI | CTTGAG | 1 cut(s) | 577 |
| BpuMI | CCSGG | 1 cut(s) | 1524 |
| BsaBI | GATNNNNATC | 1 cut(s) | 342 |
| BsaHI | GRCGYC | 1 cut(s) | 639 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 303, 333 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 864, 1483, 2891, 2892 |
| Bse1I | ACTGG | 4 cut(s) | 1185, 1242, 2385, 2421 |
| Bse21I | CCTNAGG | 1 cut(s) | 1713 |
| Bse3DI | GCAATG | 2 cut(s) | 1326, 2342 |
| Bse8I | GATNNNNATC | 1 cut(s) | 342 |
| BseBI | CCWGG | 1 cut(s) | 2757 |
| BseGI | GGATG | 4 cut(s) | 160, 280, 1467, 2438 |
| BseJI | GATNNNNATC | 1 cut(s) | 342 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 864, 1483, 2891, 2892 |
| BseMI | GCAATG | 2 cut(s) | 1326, 2342 |
| BseMII | CTCAG | 4 cut(s) | 59, 1851, 1883, 2481 |
| BseNI | ACTGG | 4 cut(s) | 1185, 1242, 2385, 2421 |
| BseRI | GAGGAG | 4 cut(s) | 33, 751, 2667, 2864 |
| BseSI | GKGCMC | 1 cut(s) | 2205 |
| BseXI | GCAGC | 5 cut(s) | 190, 613, 1794, 2930, 2942 |
| BseYI | CCCAGC | 1 cut(s) | 2143 |
| BsgI | GTGCAG | 1 cut(s) | 1552 |
| BshFI | GGCC | 4 cut(s) | 1101, 1158, 2502, 2621 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1946, 2771 |
| BsiSI | CCGG | 2 cut(s) | 1501, 1523 |
| BslFI | GGGAC | 1 cut(s) | 1500 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 864, 1483, 2891, 2892 |
| BsmAI | GTCTC | 1 cut(s) | 436 |
| BsmFI | GGGAC | 1 cut(s) | 1500 |
| BsmI | GAATGC | 2 cut(s) | 1088, 2365 |
| BsnI | GGCC | 4 cut(s) | 1101, 1158, 2502, 2621 |
| BsoBI | CYCGRG | 2 cut(s) | 1946, 2771 |
| Bsp1286I | GDGCHC | 1 cut(s) | 2205 |
| BspACI | CCGC | 5 cut(s) | 643, 669, 698, 1504, 2801 |
| BspANI | GGCC | 4 cut(s) | 1101, 1158, 2502, 2621 |
| BspCNI | CTCAG | 4 cut(s) | 58, 1852, 1884, 2482 |
| BspLI | GGNNCC | 2 cut(s) | 853, 2822 |
| BspMI | ACCTGC | 1 cut(s) | 2139 |
| BspOI | GCTAGC | 1 cut(s) | 2595 |
| BspPI | GGATC | 4 cut(s) | 152, 338, 1914, 2391 |
| BsrBI | CCGCTC | 1 cut(s) | 698 |
| BsrDI | GCAATG | 2 cut(s) | 1326, 2342 |
| BsrI | ACTGG | 4 cut(s) | 1185, 1242, 2385, 2421 |
| BssNAI | GTATAC | 1 cut(s) | 2587 |
| BssNI | GRCGYC | 1 cut(s) | 639 |
| Bst1107I | GTATAC | 1 cut(s) | 2587 |
| Bst2UI | CCWGG | 1 cut(s) | 2757 |
| Bst4CI | ACNGT | 5 cut(s) | 319, 2023, 2265, 2672, 2696 |
| Bst6I | CTCTTC | 3 cut(s) | 1195, 1237, 1299 |
| BstACI | GRCGYC | 1 cut(s) | 639 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 200, 1471 |
| BstC8I | GCNNGC | 3 cut(s) | 2504, 2546, 2593 |
| BstF5I | GGATG | 4 cut(s) | 160, 280, 1467, 2438 |
| BstMAI | GTCTC | 1 cut(s) | 436 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 200, 1471, 2140, 2927 |
| BstNI | CCWGG | 1 cut(s) | 2757 |
| BstNSI | RCATGY | 2 cut(s) | 449, 1335 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1647 |
| BstSCI | CCNGG | 2 cut(s) | 1522, 2755 |
| BstSLI | GKGCMC | 1 cut(s) | 2205 |
| BstV1I | GCAGC | 5 cut(s) | 190, 613, 1794, 2930, 2942 |
| BstV2I | GAAGAC | 5 cut(s) | 642, 1459, 1560, 2051, 2516 |
| BstX2I | RGATCY | 4 cut(s) | 1204, 1427, 1906, 2383 |
| BstYI | RGATCY | 4 cut(s) | 1204, 1427, 1906, 2383 |
| BstZ17I | GTATAC | 1 cut(s) | 2587 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1713 |
| BsuI | GTATCC | 2 cut(s) | 79, 1776 |
| BsuRI | GGCC | 4 cut(s) | 1101, 1158, 2502, 2621 |
| BtgZI | GCGATG | 1 cut(s) | 1401 |
| BtrI | CACGTC | 1 cut(s) | 1645 |
| BtsCI | GGATG | 4 cut(s) | 160, 280, 1467, 2438 |
| BtsI | GCAGTG | 2 cut(s) | 117, 2074 |
| BtsIMutI | CAGTG | 4 cut(s) | 53, 117, 2074, 2428 |
| BveI | ACCTGC | 1 cut(s) | 2139 |
| Cac8I | GCNNGC | 3 cut(s) | 2504, 2546, 2593 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1807 |
| Cfr13I | GGNCC | 1 cut(s) | 2821 |
| Csp6I | GTAC | 5 cut(s) | 8, 320, 1178, 2705, 2779 |
| CviAII | CATG | 9 cut(s) | 264, 446, 1016, 1196, 1332, 1448, 2150, 2277, 2576 |
| CviQI | GTAC | 5 cut(s) | 8, 320, 1178, 2705, 2779 |
| DraI | TTTAAA | 3 cut(s) | 930, 1930, 2257 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 2520 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 2520 |
| EaeI | YGGCCR | 2 cut(s) | 2500, 2619 |
| Eam1104I | CTCTTC | 3 cut(s) | 1195, 1237, 1299 |
| EarI | CTCTTC | 3 cut(s) | 1195, 1237, 1299 |
| Eco147I | AGGCCT | 1 cut(s) | 1158 |
| Eco47I | GGWCC | 1 cut(s) | 2821 |
| Eco57I | CTGAAG | 6 cut(s) | 1128, 1323, 1389, 1611, 1709, 2510 |
| Eco81I | CCTNAGG | 1 cut(s) | 1713 |
| Eco88I | CYCGRG | 2 cut(s) | 1946, 2771 |
| EcoRI | GAATTC | 2 cut(s) | 288, 481 |
| EcoRII | CCWGG | 1 cut(s) | 2755 |
| FaeI | CATG | 9 cut(s) | 267, 449, 1019, 1199, 1335, 1451, 2153, 2280, 2579 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1104, 1136 |
| FaqI | GGGAC | 1 cut(s) | 1500 |
| FatI | CATG | 9 cut(s) | 263, 445, 1015, 1195, 1331, 1447, 2149, 2276, 2575 |
| FauI | CCCGC | 2 cut(s) | 662, 1497 |
| FblI | GTMKAC | 3 cut(s) | 778, 828, 2586 |
| Fnu4HI | GCNGC | 5 cut(s) | 204, 602, 1808, 2919, 2931 |
| FokI | GGATG | 4 cut(s) | 167, 287, 1474, 2445 |
| Fsp4HI | GCNGC | 5 cut(s) | 204, 602, 1808, 2919, 2931 |
| FspBI | CTAG | 7 cut(s) | 578, 990, 1295, 1322, 2511, 2592, 2985 |
| GluI | GCNGC | 5 cut(s) | 204, 602, 1808, 2919, 2931 |
| GsaI | CCCAGC | 1 cut(s) | 2147 |
| GsuI | CTGGAG | 2 cut(s) | 174, 1052 |
| HaeIII | GGCC | 4 cut(s) | 1101, 1158, 2502, 2621 |
| HapII | CCGG | 2 cut(s) | 1501, 1523 |
| Hin1I | GRCGYC | 1 cut(s) | 639 |
| Hin1II | CATG | 9 cut(s) | 267, 449, 1019, 1199, 1335, 1451, 2153, 2280, 2579 |
| HincII | GTYRAC | 3 cut(s) | 261, 829, 1990 |
| HindII | GTYRAC | 3 cut(s) | 261, 829, 1990 |
| HindIII | AAGCTT | 3 cut(s) | 2120, 2168, 2546 |
| HpaII | CCGG | 2 cut(s) | 1501, 1523 |
| HphI | GGTGA | 3 cut(s) | 2259, 2777, 2995 |
| Hpy166II | GTNNAC | 9 cut(s) | 261, 779, 829, 913, 1615, 1642, 1742, 1990, 2587 |
| Hpy188I | TCNGA | 8 cut(s) | 352, 515, 766, 838, 1303, 1630, 1893, 2956 |
| Hpy8I | GTNNAC | 9 cut(s) | 261, 779, 829, 913, 1615, 1642, 1742, 1990, 2587 |
| HpyCH4III | ACNGT | 5 cut(s) | 319, 2023, 2265, 2672, 2696 |
| HpyCH4IV | ACGT | 2 cut(s) | 639, 1644 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 200, 1471, 2140, 2927 |
| HpySE526I | ACGT | 2 cut(s) | 639, 1644 |
| Hsp92I | GRCGYC | 1 cut(s) | 639 |
| Hsp92II | CATG | 9 cut(s) | 267, 449, 1019, 1199, 1335, 1451, 2153, 2280, 2579 |
| LmnI | GCTCC | 5 cut(s) | 851, 1479, 2511, 2758, 2851 |
| Lsp1109I | GCAGC | 5 cut(s) | 190, 613, 1794, 2930, 2942 |
| LweI | GCATC | 5 cut(s) | 147, 1452, 2505, 2905, 2930 |
| MaeI | CTAG | 7 cut(s) | 578, 990, 1295, 1322, 2511, 2592, 2985 |
| MaeII | ACGT | 2 cut(s) | 639, 1644 |
| MbiI | CCGCTC | 1 cut(s) | 698 |
| MfeI | CAATTG | 2 cut(s) | 207, 1998 |
| MflI | RGATCY | 4 cut(s) | 1204, 1427, 1906, 2383 |
| MhlI | GDGCHC | 1 cut(s) | 2205 |
| MlsI | TGGCCA | 1 cut(s) | 2621 |
| MluNI | TGGCCA | 1 cut(s) | 2621 |
| MlyI | GAGTC | 4 cut(s) | 1610, 1634, 1657, 1903 |
| MmeI | TCCRAC | 2 cut(s) | 2230, 2511 |
| Mox20I | TGGCCA | 1 cut(s) | 2621 |
| MroXI | GAANNNNTTC | 5 cut(s) | 1088, 1116, 1316, 2241, 2523 |
| MscI | TGGCCA | 1 cut(s) | 2621 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1610, 2907 |
| Msp20I | TGGCCA | 1 cut(s) | 2621 |
| MspA1I | CMGCKG | 1 cut(s) | 1080 |
| MspI | CCGG | 2 cut(s) | 1501, 1523 |
| MspR9I | CCNGG | 2 cut(s) | 1524, 2757 |
| MunI | CAATTG | 2 cut(s) | 207, 1998 |
| Mva1269I | GAATGC | 2 cut(s) | 1088, 2365 |
| MvaI | CCWGG | 1 cut(s) | 2757 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 200, 1471, 2140, 2927 |
| NciI | CCSGG | 1 cut(s) | 1524 |
| NheI | GCTAGC | 1 cut(s) | 2591 |
| NlaIII | CATG | 9 cut(s) | 267, 449, 1019, 1199, 1335, 1451, 2153, 2280, 2579 |
| NlaIV | GGNNCC | 2 cut(s) | 853, 2822 |
| NmuCI | GTSAC | 6 cut(s) | 878, 1895, 2265, 2321, 2390, 3001 |
| NspI | RCATGY | 2 cut(s) | 449, 1335 |
| PaeR7I | CTCGAG | 1 cut(s) | 1946 |
| PceI | AGGCCT | 1 cut(s) | 1158 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 1766, 2700 |
| PctI | GAATGC | 2 cut(s) | 1088, 2365 |
| PdmI | GAANNNNTTC | 5 cut(s) | 1088, 1116, 1316, 2241, 2523 |
| PfeI | GAWTC | 7 cut(s) | 215, 500, 1061, 1298, 1508, 1705, 2797 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1483 |
| PfoI | TCCNGGA | 1 cut(s) | 2755 |
| PkrI | GCNGC | 5 cut(s) | 205, 603, 1809, 2920, 2932 |
| PleI | GAGTC | 4 cut(s) | 1610, 1633, 1656, 1902 |
| PpsI | GAGTC | 4 cut(s) | 1610, 1633, 1656, 1902 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1647 |
| PshBI | ATTAAT | 1 cut(s) | 1695 |
| PsiI | TTATAA | 2 cut(s) | 863, 1142 |
| Psp6I | CCWGG | 1 cut(s) | 2755 |
| PspFI | CCCAGC | 1 cut(s) | 2143 |
| PspGI | CCWGG | 1 cut(s) | 2755 |
| PspN4I | GGNNCC | 2 cut(s) | 853, 2822 |
| PspPI | GGNCC | 1 cut(s) | 2821 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1807 |
| PsuI | RGATCY | 4 cut(s) | 1204, 1427, 1906, 2383 |
| PvuII | CAGCTG | 1 cut(s) | 1080 |
| RsaI | GTAC | 5 cut(s) | 9, 321, 1179, 2706, 2780 |
| RsaNI | GTAC | 5 cut(s) | 8, 320, 1178, 2705, 2779 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1610, 2907 |
| SalI | GTCGAC | 1 cut(s) | 827 |
| SatI | GCNGC | 5 cut(s) | 204, 602, 1808, 2919, 2931 |
| Sau96I | GGNCC | 1 cut(s) | 2821 |
| ScaI | AGTACT | 1 cut(s) | 1179 |
| SchI | GAGTC | 4 cut(s) | 1610, 1634, 1657, 1903 |
| ScrFI | CCNGG | 2 cut(s) | 1524, 2757 |
| SduI | GDGCHC | 1 cut(s) | 2205 |
| SfaNI | GCATC | 5 cut(s) | 147, 1452, 2505, 2905, 2930 |
| Sfr274I | CTCGAG | 1 cut(s) | 1946 |
| SinI | GGWCC | 1 cut(s) | 2821 |
| SlaI | CTCGAG | 1 cut(s) | 1946 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1610, 2907 |
| SmlI | CTYRAG | 2 cut(s) | 592, 1946 |
| SmoI | CTYRAG | 2 cut(s) | 592, 1946 |
| SseBI | AGGCCT | 1 cut(s) | 1158 |
| SsiI | CCGC | 5 cut(s) | 643, 669, 698, 1504, 2801 |
| SspI | AATATT | 2 cut(s) | 935, 1317 |
| SspMI | CTAG | 7 cut(s) | 578, 990, 1295, 1322, 2511, 2592, 2985 |
| StuI | AGGCCT | 1 cut(s) | 1158 |
| StyD4I | CCNGG | 2 cut(s) | 1522, 2755 |
| TaaI | ACNGT | 5 cut(s) | 319, 2023, 2265, 2672, 2696 |
| TaiI | ACGT | 2 cut(s) | 642, 1647 |
| TaqI | TCGA | 7 cut(s) | 91, 828, 1266, 1360, 1651, 1812, 1947 |
| TatI | WGTACW | 2 cut(s) | 319, 1177 |
| TfiI | GAWTC | 7 cut(s) | 215, 500, 1061, 1298, 1508, 1705, 2797 |
| TscAI | CASTG | 4 cut(s) | 53, 124, 2074, 2428 |
| TseFI | GTSAC | 6 cut(s) | 878, 1895, 2265, 2321, 2390, 3001 |
| TseI | GCWGC | 5 cut(s) | 203, 601, 1807, 2918, 2930 |
| Tsp45I | GTSAC | 6 cut(s) | 878, 1895, 2265, 2321, 2390, 3001 |
| TspGWI | ACGGA | 4 cut(s) | 1359, 1758, 2692, 2813 |
| TspRI | CASTG | 4 cut(s) | 53, 124, 2074, 2428 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1483 |
| VpaK11BI | GGWCC | 1 cut(s) | 2821 |
| VspI | ATTAAT | 1 cut(s) | 1695 |
| XapI | RAATTY | 7 cut(s) | 288, 481, 722, 728, 1046, 1260, 2968 |
| XbaI | TCTAGA | 2 cut(s) | 989, 1294 |
| XceI | RCATGY | 2 cut(s) | 449, 1335 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2577 |
| XhoI | CTCGAG | 1 cut(s) | 1946 |
| XmiI | GTMKAC | 3 cut(s) | 778, 828, 2586 |
| XmnI | GAANNNNTTC | 5 cut(s) | 1088, 1116, 1316, 2241, 2523 |
| XspI | CTAG | 7 cut(s) | 578, 990, 1295, 1322, 2511, 2592, 2985 |
| ZraI | GACGTC | 1 cut(s) | 640 |
| ZrmI | AGTACT | 1 cut(s) | 1179 |