TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| LRR_14 | PF23598 | 51 - 154 | 2.4e-15 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 75 - 160 | 6.2e-06 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 149 - 206 | 3.4e-06 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 229 - 303 | 2.6e-09 | Leucine-rich repeat region |
| C-JID | PF20160 | 379 - 522 | 9e-17 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1174 |
| AciI | CCGC | 1 cut(s) | 1517 |
| AclWI | GGATC | 2 cut(s) | 747, 1386 |
| AcoI | YGGCCR | 1 cut(s) | 1311 |
| AcsI | RAATTY | 2 cut(s) | 1345, 1466 |
| AcuI | CTGAAG | 2 cut(s) | 783, 1644 |
| AfaI | GTAC | 4 cut(s) | 1003, 1045, 1101, 1160 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1174 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 973 |
| AjnI | CCWGG | 5 cut(s) | 136, 735, 1135, 1204, 1238 |
| AleI | CACNNNNGTG | 1 cut(s) | 1170 |
| AluBI | AGCT | 9 cut(s) | 313, 423, 478, 526, 904, 922, 1035, 1198, 1462 |
| AluI | AGCT | 9 cut(s) | 313, 423, 478, 526, 904, 922, 1035, 1198, 1462 |
| Alw21I | GWGCWC | 2 cut(s) | 1304, 1404 |
| Alw44I | GTGCAC | 1 cut(s) | 1400 |
| AlwI | GGATC | 2 cut(s) | 747, 1386 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 954 |
| AoxI | GGCC | 3 cut(s) | 133, 1311, 1609 |
| ApaLI | GTGCAC | 1 cut(s) | 1400 |
| ApeKI | GCWGC | 4 cut(s) | 4, 897, 1198, 1637 |
| ApoI | RAATTY | 2 cut(s) | 1345, 1466 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 661, 693 |
| AseI | ATTAAT | 2 cut(s) | 30, 1725 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 879, 1232, 1493 |
| AspLEI | GCGC | 1 cut(s) | 1700 |
| AspS9I | GGNCC | 3 cut(s) | 134, 1537, 1703 |
| AsuHPI | GGTGA | 3 cut(s) | 615, 1157, 1474 |
| AvaII | GGWCC | 2 cut(s) | 1537, 1703 |
| BaeGI | GKGCMC | 2 cut(s) | 561, 1404 |
| BanII | GRGCYC | 1 cut(s) | 1366 |
| BbsI | GAAGAC | 1 cut(s) | 407 |
| Bbv12I | GWGCWC | 2 cut(s) | 1304, 1404 |
| BbvCI | CCTCAGC | 1 cut(s) | 947 |
| BbvI | GCAGC | 4 cut(s) | 16, 884, 1185, 1649 |
| BccI | CCATC | 2 cut(s) | 382, 1406 |
| BceAI | ACGGC | 2 cut(s) | 1326, 1711 |
| BciT130I | CCWGG | 5 cut(s) | 138, 737, 1137, 1206, 1240 |
| BciVI | GTATCC | 1 cut(s) | 1415 |
| BclI | TGATCA | 1 cut(s) | 996 |
| BfaI | CTAG | 3 cut(s) | 606, 867, 1644 |
| BfuI | GTATCC | 1 cut(s) | 1415 |
| BglII | AGATCT | 1 cut(s) | 451 |
| BisI | GCNGC | 4 cut(s) | 5, 898, 1199, 1638 |
| BlpI | GCTNAGC | 1 cut(s) | 793 |
| BlsI | GCNGC | 4 cut(s) | 6, 899, 1200, 1639 |
| BmcAI | AGTACT | 1 cut(s) | 1003 |
| Bme1390I | CCNGG | 5 cut(s) | 138, 737, 1137, 1206, 1240 |
| Bme18I | GGWCC | 2 cut(s) | 1537, 1703 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 973 |
| BmgT120I | GGNCC | 3 cut(s) | 134, 1537, 1703 |
| BmiI | GGNNCC | 3 cut(s) | 1538, 1705, 1714 |
| BmrFI | CCNGG | 5 cut(s) | 138, 737, 1137, 1206, 1240 |
| BmrI | ACTGGG | 1 cut(s) | 771 |
| BmsI | GCATC | 5 cut(s) | 779, 861, 1210, 1624, 1649 |
| BmuI | ACTGGG | 1 cut(s) | 771 |
| BoxI | GACNNNNGTC | 1 cut(s) | 288 |
| BpiI | GAAGAC | 1 cut(s) | 407 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 28, 60 |
| Bpu10I | CCTNAGC | 1 cut(s) | 947 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 793 |
| BpuEI | CTTGAG | 1 cut(s) | 110 |
| BsaBI | GATNNNNATC | 1 cut(s) | 456 |
| BsaJI | CCNNGG | 2 cut(s) | 136, 1277 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1174 |
| Bse1I | ACTGG | 3 cut(s) | 334, 361, 777 |
| Bse3DI | GCAATG | 1 cut(s) | 1055 |
| Bse8I | GATNNNNATC | 1 cut(s) | 456 |
| BseBI | CCWGG | 5 cut(s) | 138, 737, 1137, 1206, 1240 |
| BseDI | CCNNGG | 2 cut(s) | 136, 1277 |
| BseGI | GGATG | 3 cut(s) | 794, 1201, 1663 |
| BseJI | GATNNNNATC | 1 cut(s) | 456 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1174 |
| BseMI | GCAATG | 1 cut(s) | 1055 |
| BseMII | CTCAG | 1 cut(s) | 961 |
| BseNI | ACTGG | 3 cut(s) | 334, 361, 777 |
| BseRI | GAGGAG | 2 cut(s) | 323, 1580 |
| BseSI | GKGCMC | 2 cut(s) | 561, 1404 |
| BseXI | GCAGC | 4 cut(s) | 16, 884, 1185, 1649 |
| BshFI | GGCC | 3 cut(s) | 135, 1313, 1611 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1304, 1404 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1174 |
| BsmI | GAATGC | 2 cut(s) | 366, 721 |
| BsnI | GGCC | 3 cut(s) | 135, 1313, 1611 |
| Bsp1286I | GDGCHC | 4 cut(s) | 561, 1304, 1366, 1404 |
| Bsp143I | GATC | 4 cut(s) | 451, 739, 996, 1378 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 793 |
| BspACI | CCGC | 1 cut(s) | 1517 |
| BspANI | GGCC | 3 cut(s) | 135, 1313, 1611 |
| BspCNI | CTCAG | 1 cut(s) | 960 |
| BspLI | GGNNCC | 3 cut(s) | 1538, 1705, 1714 |
| BspPI | GGATC | 2 cut(s) | 747, 1386 |
| BsrDI | GCAATG | 1 cut(s) | 1055 |
| BsrI | ACTGG | 3 cut(s) | 334, 361, 777 |
| BssECI | CCNNGG | 2 cut(s) | 136, 1277 |
| BssMI | GATC | 4 cut(s) | 451, 739, 996, 1378 |
| BssT1I | CCWWGG | 1 cut(s) | 1277 |
| Bst2UI | CCWGG | 5 cut(s) | 138, 737, 1137, 1206, 1240 |
| Bst4CI | ACNGT | 6 cut(s) | 166, 621, 1104, 1112, 1192, 1406 |
| BstC8I | GCNNGC | 2 cut(s) | 208, 902 |
| BstDEI | CTNAG | 4 cut(s) | 743, 793, 846, 947 |
| BstF5I | GGATG | 3 cut(s) | 794, 1201, 1663 |
| BstHHI | GCGC | 1 cut(s) | 1700 |
| BstKTI | GATC | 4 cut(s) | 454, 742, 999, 1381 |
| BstMBI | GATC | 4 cut(s) | 451, 739, 996, 1378 |
| BstNI | CCWGG | 5 cut(s) | 138, 737, 1137, 1206, 1240 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 288 |
| BstSCI | CCNGG | 5 cut(s) | 136, 735, 1135, 1204, 1238 |
| BstSLI | GKGCMC | 2 cut(s) | 561, 1404 |
| BstV1I | GCAGC | 4 cut(s) | 16, 884, 1185, 1649 |
| BstV2I | GAAGAC | 1 cut(s) | 407 |
| BstX2I | RGATCY | 2 cut(s) | 451, 739 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 985, 1739 |
| BstYI | RGATCY | 2 cut(s) | 451, 739 |
| BsuI | GTATCC | 1 cut(s) | 1415 |
| BsuRI | GGCC | 3 cut(s) | 135, 1313, 1611 |
| BtsCI | GGATG | 3 cut(s) | 794, 1201, 1663 |
| BtsI | GCAGTG | 3 cut(s) | 217, 377, 1304 |
| BtsIMutI | CAGTG | 4 cut(s) | 217, 377, 784, 1304 |
| Cac8I | GCNNGC | 2 cut(s) | 208, 902 |
| CaiI | CAGNNNCTG | 1 cut(s) | 954 |
| CfoI | GCGC | 1 cut(s) | 1700 |
| Cfr13I | GGNCC | 3 cut(s) | 134, 1537, 1703 |
| Csp6I | GTAC | 4 cut(s) | 1002, 1044, 1100, 1159 |
| CviAII | CATG | 5 cut(s) | 633, 1436, 1486, 1691, 1739 |
| CviQI | GTAC | 4 cut(s) | 1002, 1044, 1100, 1159 |
| DdeI | CTNAG | 4 cut(s) | 743, 793, 846, 947 |
| DpnI | GATC | 4 cut(s) | 453, 741, 998, 1380 |
| DpnII | GATC | 4 cut(s) | 451, 739, 996, 1378 |
| DraI | TTTAAA | 6 cut(s) | 73, 438, 1291, 1432, 1477, 1678 |
| DriI | GACNNNNNGTC | 1 cut(s) | 973 |
| EaeI | YGGCCR | 1 cut(s) | 1311 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 973 |
| Eco130I | CCWWGG | 1 cut(s) | 1277 |
| Eco147I | AGGCCT | 1 cut(s) | 1611 |
| Eco24I | GRGCYC | 1 cut(s) | 1366 |
| Eco32I | GATATC | 1 cut(s) | 1450 |
| Eco47I | GGWCC | 2 cut(s) | 1537, 1703 |
| Eco57I | CTGAAG | 2 cut(s) | 783, 1644 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1703 |
| EcoRI | GAATTC | 1 cut(s) | 1466 |
| EcoRII | CCWGG | 5 cut(s) | 136, 735, 1135, 1204, 1238 |
| EcoRV | GATATC | 1 cut(s) | 1450 |
| EcoT14I | CCWWGG | 1 cut(s) | 1277 |
| EcoT38I | GRGCYC | 1 cut(s) | 1366 |
| ErhI | CCWWGG | 1 cut(s) | 1277 |
| FaeI | CATG | 5 cut(s) | 636, 1439, 1489, 1694, 1742 |
| FatI | CATG | 5 cut(s) | 632, 1435, 1485, 1690, 1738 |
| FauNDI | CATATG | 1 cut(s) | 1549 |
| FbaI | TGATCA | 1 cut(s) | 996 |
| Fnu4HI | GCNGC | 4 cut(s) | 5, 898, 1199, 1638 |
| FokI | GGATG | 3 cut(s) | 801, 1188, 1650 |
| FriOI | GRGCYC | 1 cut(s) | 1366 |
| Fsp4HI | GCNGC | 4 cut(s) | 5, 898, 1199, 1638 |
| FspBI | CTAG | 3 cut(s) | 606, 867, 1644 |
| GlaI | GCGC | 1 cut(s) | 1699 |
| GluI | GCNGC | 4 cut(s) | 5, 898, 1199, 1638 |
| HaeIII | GGCC | 3 cut(s) | 135, 1313, 1611 |
| HhaI | GCGC | 1 cut(s) | 1700 |
| Hin1II | CATG | 5 cut(s) | 636, 1439, 1489, 1694, 1742 |
| Hin6I | GCGC | 1 cut(s) | 1698 |
| HinP1I | GCGC | 1 cut(s) | 1698 |
| HincII | GTYRAC | 1 cut(s) | 268 |
| HindII | GTYRAC | 1 cut(s) | 268 |
| HindIII | AAGCTT | 3 cut(s) | 476, 524, 902 |
| HinfI | GANTC | 7 cut(s) | 37, 49, 190, 244, 890, 1233, 1257 |
| HpaI | GTTAAC | 1 cut(s) | 268 |
| HphI | GGTGA | 3 cut(s) | 615, 1157, 1474 |
| Hpy166II | GTNNAC | 3 cut(s) | 268, 943, 1402 |
| Hpy188I | TCNGA | 4 cut(s) | 48, 321, 763, 1624 |
| Hpy188III | TCNNGA | 4 cut(s) | 89, 104, 867, 1498 |
| Hpy8I | GTNNAC | 3 cut(s) | 268, 943, 1402 |
| HpyAV | CCTTC | 4 cut(s) | 101, 1222, 1483, 1622 |
| HpyCH4III | ACNGT | 6 cut(s) | 166, 621, 1104, 1112, 1192, 1406 |
| HpyF3I | CTNAG | 4 cut(s) | 743, 793, 846, 947 |
| Hsp92II | CATG | 5 cut(s) | 636, 1439, 1489, 1694, 1742 |
| HspAI | GCGC | 1 cut(s) | 1698 |
| Ksp22I | TGATCA | 1 cut(s) | 996 |
| KspAI | GTTAAC | 1 cut(s) | 268 |
| Kzo9I | GATC | 4 cut(s) | 451, 739, 996, 1378 |
| LmnI | GCTCC | 3 cut(s) | 310, 1138, 1195 |
| Lsp1109I | GCAGC | 4 cut(s) | 16, 884, 1185, 1649 |
| LweI | GCATC | 5 cut(s) | 779, 861, 1210, 1624, 1649 |
| MaeI | CTAG | 3 cut(s) | 606, 867, 1644 |
| MaeIII | GTNAC | 5 cut(s) | 38, 218, 621, 677, 746 |
| MalI | GATC | 4 cut(s) | 453, 741, 998, 1380 |
| MboI | GATC | 4 cut(s) | 451, 739, 996, 1378 |
| MboII | GAAGA | 8 cut(s) | 404, 407, 776, 872, 1384, 1513, 1568, 1637 |
| MflI | RGATCY | 2 cut(s) | 451, 739 |
| MhlI | GDGCHC | 4 cut(s) | 561, 1304, 1366, 1404 |
| MlyI | GAGTC | 2 cut(s) | 46, 1251 |
| MmeI | TCCRAC | 3 cut(s) | 817, 950, 1356 |
| MroXI | GAANNNNTTC | 3 cut(s) | 879, 1232, 1493 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1170, 1407 |
| MspR9I | CCNGG | 5 cut(s) | 138, 737, 1137, 1206, 1240 |
| Mva1269I | GAATGC | 2 cut(s) | 366, 721 |
| MvaI | CCWGG | 5 cut(s) | 138, 737, 1137, 1206, 1240 |
| NdeI | CATATG | 1 cut(s) | 1549 |
| NdeII | GATC | 4 cut(s) | 451, 739, 996, 1378 |
| NlaIII | CATG | 5 cut(s) | 636, 1439, 1489, 1694, 1742 |
| NlaIV | GGNNCC | 3 cut(s) | 1538, 1705, 1714 |
| NmuCI | GTSAC | 5 cut(s) | 38, 218, 621, 677, 746 |
| OliI | CACNNNNGTG | 1 cut(s) | 1170 |
| PceI | AGGCCT | 1 cut(s) | 1611 |
| PctI | GAATGC | 2 cut(s) | 366, 721 |
| PdmI | GAANNNNTTC | 3 cut(s) | 879, 1232, 1493 |
| PfeI | GAWTC | 5 cut(s) | 49, 190, 244, 890, 1233 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1174 |
| PfoI | TCCNGGA | 1 cut(s) | 1135 |
| PkrI | GCNGC | 4 cut(s) | 6, 899, 1200, 1639 |
| PleI | GAGTC | 2 cut(s) | 45, 1251 |
| PpsI | GAGTC | 2 cut(s) | 45, 1251 |
| PpuMI | RGGWCCY | 1 cut(s) | 1703 |
| PshAI | GACNNNNGTC | 1 cut(s) | 288 |
| PshBI | ATTAAT | 2 cut(s) | 30, 1725 |
| Psp5II | RGGWCCY | 1 cut(s) | 1703 |
| Psp6I | CCWGG | 5 cut(s) | 136, 735, 1135, 1204, 1238 |
| PspGI | CCWGG | 5 cut(s) | 136, 735, 1135, 1204, 1238 |
| PspN4I | GGNNCC | 3 cut(s) | 1538, 1705, 1714 |
| PspPI | GGNCC | 3 cut(s) | 134, 1537, 1703 |
| PspPPI | RGGWCCY | 1 cut(s) | 1703 |
| PstNI | CAGNNNCTG | 1 cut(s) | 954 |
| PsuI | RGATCY | 2 cut(s) | 451, 739 |
| RsaI | GTAC | 4 cut(s) | 1003, 1045, 1101, 1160 |
| RsaNI | GTAC | 4 cut(s) | 1002, 1044, 1100, 1159 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1170, 1407 |
| SatI | GCNGC | 4 cut(s) | 5, 898, 1199, 1638 |
| Sau3AI | GATC | 4 cut(s) | 451, 739, 996, 1378 |
| Sau96I | GGNCC | 3 cut(s) | 134, 1537, 1703 |
| ScaI | AGTACT | 1 cut(s) | 1003 |
| SchI | GAGTC | 2 cut(s) | 46, 1251 |
| ScrFI | CCNGG | 5 cut(s) | 138, 737, 1137, 1206, 1240 |
| SduI | GDGCHC | 4 cut(s) | 561, 1304, 1366, 1404 |
| SfaNI | GCATC | 5 cut(s) | 779, 861, 1210, 1624, 1649 |
| SinI | GGWCC | 2 cut(s) | 1537, 1703 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1170, 1407 |
| SmlI | CTYRAG | 1 cut(s) | 89 |
| SmoI | CTYRAG | 1 cut(s) | 89 |
| SseBI | AGGCCT | 1 cut(s) | 1611 |
| SsiI | CCGC | 1 cut(s) | 1517 |
| SspI | AATATT | 1 cut(s) | 810 |
| SspMI | CTAG | 3 cut(s) | 606, 867, 1644 |
| StuI | AGGCCT | 1 cut(s) | 1611 |
| StyD4I | CCNGG | 5 cut(s) | 136, 735, 1135, 1204, 1238 |
| StyI | CCWWGG | 1 cut(s) | 1277 |
| TaaI | ACNGT | 6 cut(s) | 166, 621, 1104, 1112, 1192, 1406 |
| TatI | WGTACW | 2 cut(s) | 1001, 1043 |
| TfiI | GAWTC | 5 cut(s) | 49, 190, 244, 890, 1233 |
| TscAI | CASTG | 4 cut(s) | 217, 384, 784, 1304 |
| TseFI | GTSAC | 5 cut(s) | 38, 218, 621, 677, 746 |
| TseI | GCWGC | 4 cut(s) | 4, 897, 1198, 1637 |
| Tsp45I | GTSAC | 5 cut(s) | 38, 218, 621, 677, 746 |
| TspDTI | ATGAA | 7 cut(s) | 714, 951, 1044, 1044, 1158, 1502, 1538 |
| TspGWI | ACGGA | 1 cut(s) | 1529 |
| TspRI | CASTG | 4 cut(s) | 217, 384, 784, 1304 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1174 |
| VneI | GTGCAC | 1 cut(s) | 1400 |
| VpaK11BI | GGWCC | 2 cut(s) | 1537, 1703 |
| VspI | ATTAAT | 2 cut(s) | 30, 1725 |
| XapI | RAATTY | 2 cut(s) | 1345, 1466 |
| XbaI | TCTAGA | 1 cut(s) | 866 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 933, 1275 |
| XmnI | GAANNNNTTC | 3 cut(s) | 879, 1232, 1493 |
| XspI | CTAG | 3 cut(s) | 606, 867, 1644 |
| ZrmI | AGTACT | 1 cut(s) | 1003 |