TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 4 - 96 | 2e-12 | TIR domain |
| NB-ARC | PF00931 | 112 - 269 | 1.5e-21 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 336 - 408 | 3.6e-14 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_13 | PF23286 | 603 - 722 | 2.8e-06 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| C-JID | PF20160 | 781 - 923 | 6.7e-11 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 278 |
| Acc36I | ACCTGC | 1 cut(s) | 2819 |
| AccBSI | CCGCTC | 1 cut(s) | 2803 |
| AccI | GTMKAC | 1 cut(s) | 1240 |
| AciI | CCGC | 2 cut(s) | 1321, 2803 |
| AclWI | GGATC | 5 cut(s) | 41, 54, 187, 752, 1677 |
| AcoI | YGGCCR | 2 cut(s) | 165, 1105 |
| AcsI | RAATTY | 9 cut(s) | 411, 954, 1406, 1461, 1516, 2036, 2324, 2352, 2413 |
| AcuI | CTGAAG | 3 cut(s) | 766, 1784, 1959 |
| AcvI | CACGTG | 1 cut(s) | 2065 |
| AfaI | GTAC | 4 cut(s) | 60, 1684, 2613, 2816 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1850 |
| AflIII | ACRYGT | 2 cut(s) | 2122, 2616 |
| AhlI | ACTAGT | 1 cut(s) | 2392 |
| AjiI | CACGTC | 1 cut(s) | 893 |
| AjnI | CCWGG | 2 cut(s) | 1234, 2341 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 643, 675 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2174, 2206 |
| Alw21I | GWGCWC | 4 cut(s) | 204, 780, 2575, 2743 |
| Alw26I | GTCTC | 2 cut(s) | 176, 1937 |
| AlwI | GGATC | 5 cut(s) | 41, 54, 187, 752, 1677 |
| Ama87I | CYCGRG | 2 cut(s) | 299, 2798 |
| AoxI | GGCC | 3 cut(s) | 165, 1105, 1432 |
| ApeKI | GCWGC | 2 cut(s) | 149, 499 |
| ApoI | RAATTY | 9 cut(s) | 411, 954, 1406, 1461, 1516, 2036, 2324, 2352, 2413 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 630, 662 |
| AseI | ATTAAT | 1 cut(s) | 1073 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1209, 2272 |
| AspS9I | GGNCC | 3 cut(s) | 1433, 1614, 2831 |
| AsuHPI | GGTGA | 3 cut(s) | 343, 2396, 2578 |
| AvaI | CYCGRG | 2 cut(s) | 299, 2798 |
| AvaII | GGWCC | 2 cut(s) | 1614, 2831 |
| AxyI | CCTNAGG | 2 cut(s) | 327, 813 |
| BalI | TGGCCA | 1 cut(s) | 167 |
| BamHI | GGATCC | 1 cut(s) | 46 |
| BanII | GRGCYC | 3 cut(s) | 204, 780, 2743 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 810, 842, 2595, 2627 |
| BbrPI | CACGTG | 1 cut(s) | 2065 |
| BbsI | GAAGAC | 3 cut(s) | 1634, 2012, 2893 |
| Bbv12I | GWGCWC | 4 cut(s) | 204, 780, 2575, 2743 |
| BbvI | GCAGC | 2 cut(s) | 161, 511 |
| BccI | CCATC | 8 cut(s) | 426, 1534, 1714, 1783, 2176, 2194, 2425, 2640 |
| BceAI | ACGGC | 1 cut(s) | 1092 |
| BciT130I | CCWGG | 2 cut(s) | 1236, 2343 |
| BciVI | GTATCC | 2 cut(s) | 719, 1491 |
| BclI | TGATCA | 1 cut(s) | 619 |
| BcoDI | GTCTC | 2 cut(s) | 176, 1937 |
| BcuI | ACTAGT | 1 cut(s) | 2392 |
| BfaI | CTAG | 8 cut(s) | 398, 482, 696, 917, 930, 1118, 1335, 2393 |
| BfmI | CTRYAG | 3 cut(s) | 625, 2635, 2692 |
| BfuAI | ACCTGC | 1 cut(s) | 2819 |
| BfuI | GTATCC | 2 cut(s) | 719, 1491 |
| BglII | AGATCT | 1 cut(s) | 913 |
| BisI | GCNGC | 2 cut(s) | 150, 500 |
| BlpI | GCTNAGC | 1 cut(s) | 393 |
| BlsI | GCNGC | 2 cut(s) | 151, 501 |
| Bme1390I | CCNGG | 2 cut(s) | 1236, 2343 |
| Bme18I | GGWCC | 2 cut(s) | 1614, 2831 |
| BmeT110I | CYCGRG | 2 cut(s) | 299, 2798 |
| BmgBI | CACGTC | 1 cut(s) | 893 |
| BmgT120I | GGNCC | 3 cut(s) | 1433, 1614, 2831 |
| BmiI | GGNNCC | 4 cut(s) | 48, 559, 1435, 1615 |
| BmrFI | CCNGG | 2 cut(s) | 1236, 2343 |
| BmrI | ACTGGG | 2 cut(s) | 317, 2548 |
| BmsI | GCATC | 6 cut(s) | 197, 988, 1164, 1326, 1374, 2063 |
| BmuI | ACTGGG | 2 cut(s) | 317, 2548 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1858 |
| BpiI | GAAGAC | 3 cut(s) | 1634, 2012, 2893 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 1337, 1369, 2562, 2594 |
| BpmI | CTGGAG | 1 cut(s) | 1025 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 393 |
| BpuEI | CTTGAG | 5 cut(s) | 69, 538, 794, 1339, 2072 |
| BsaAI | YACGTR | 3 cut(s) | 1244, 2065, 2125 |
| BsaBI | GATNNNNATC | 2 cut(s) | 618, 1479 |
| BsaI | GGTCTC | 1 cut(s) | 1937 |
| BsaJI | CCNNGG | 3 cut(s) | 1869, 2482, 2779 |
| BsaWI | WCCGGW | 1 cut(s) | 2311 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1850 |
| Bse1I | ACTGG | 8 cut(s) | 168, 312, 1008, 1089, 1581, 1738, 2357, 2543 |
| Bse21I | CCTNAGG | 2 cut(s) | 327, 813 |
| Bse3DI | GCAATG | 1 cut(s) | 1710 |
| Bse8I | GATNNNNATC | 2 cut(s) | 618, 1479 |
| BseBI | CCWGG | 2 cut(s) | 1236, 2343 |
| BseDI | CCNNGG | 3 cut(s) | 1869, 2482, 2779 |
| BseGI | GGATG | 7 cut(s) | 550, 1039, 1317, 1706, 1757, 2436, 2492 |
| BseJI | GATNNNNATC | 2 cut(s) | 618, 1479 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1850 |
| BseMI | GCAATG | 1 cut(s) | 1710 |
| BseMII | CTCAG | 7 cut(s) | 318, 804, 980, 1730, 1823, 1988, 2196 |
| BseNI | ACTGG | 8 cut(s) | 168, 312, 1008, 1089, 1581, 1738, 2357, 2543 |
| BseRI | GAGGAG | 1 cut(s) | 1033 |
| BseXI | GCAGC | 2 cut(s) | 161, 511 |
| BsgI | GTGCAG | 2 cut(s) | 516, 2420 |
| BshFI | GGCC | 3 cut(s) | 167, 1107, 1434 |
| BsiHKAI | GWGCWC | 4 cut(s) | 204, 780, 2575, 2743 |
| BsiHKCI | CYCGRG | 2 cut(s) | 299, 2798 |
| BsiSI | CCGG | 2 cut(s) | 1431, 2312 |
| BslFI | GGGAC | 3 cut(s) | 903, 1580, 2531 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1850 |
| BsmAI | GTCTC | 2 cut(s) | 176, 1937 |
| BsmFI | GGGAC | 3 cut(s) | 903, 1580, 2531 |
| BsmI | GAATGC | 1 cut(s) | 794 |
| BsnI | GGCC | 3 cut(s) | 167, 1107, 1434 |
| Bso31I | GGTCTC | 1 cut(s) | 1937 |
| BsoBI | CYCGRG | 2 cut(s) | 299, 2798 |
| Bsp1286I | GDGCHC | 4 cut(s) | 204, 780, 2575, 2743 |
| Bsp1407I | TGTACA | 1 cut(s) | 2611 |
| Bsp143I | GATC | 9 cut(s) | 46, 179, 619, 734, 757, 913, 1669, 1924, 2461 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 393 |
| BspACI | CCGC | 2 cut(s) | 1321, 2803 |
| BspANI | GGCC | 3 cut(s) | 167, 1107, 1434 |
| BspCNI | CTCAG | 7 cut(s) | 319, 805, 981, 1731, 1824, 1989, 2197 |
| BspLI | GGNNCC | 4 cut(s) | 48, 559, 1435, 1615 |
| BspMI | ACCTGC | 1 cut(s) | 2819 |
| BspPI | GGATC | 5 cut(s) | 41, 54, 187, 752, 1677 |
| BspQI | GCTCTTC | 1 cut(s) | 785 |
| BspTNI | GGTCTC | 1 cut(s) | 1937 |
| BsrBI | CCGCTC | 1 cut(s) | 2803 |
| BsrDI | GCAATG | 1 cut(s) | 1710 |
| BsrGI | TGTACA | 1 cut(s) | 2611 |
| BsrI | ACTGG | 8 cut(s) | 168, 312, 1008, 1089, 1581, 1738, 2357, 2543 |
| BssECI | CCNNGG | 3 cut(s) | 1869, 2482, 2779 |
| BssMI | GATC | 9 cut(s) | 46, 179, 619, 734, 757, 913, 1669, 1924, 2461 |
| BssT1I | CCWWGG | 2 cut(s) | 1869, 2482 |
| Bst2UI | CCWGG | 2 cut(s) | 1236, 2343 |
| Bst4CI | ACNGT | 6 cut(s) | 63, 1399, 1682, 2157, 2662, 2788 |
| Bst6I | CTCTTC | 4 cut(s) | 785, 1338, 1803, 2873 |
| BstAUI | TGTACA | 1 cut(s) | 2611 |
| BstBAI | YACGTR | 3 cut(s) | 1244, 2065, 2125 |
| BstC8I | GCNNGC | 3 cut(s) | 1331, 1351, 2756 |
| BstDSI | CCRYGG | 1 cut(s) | 2779 |
| BstF5I | GGATG | 7 cut(s) | 550, 1039, 1317, 1706, 1757, 2436, 2492 |
| BstKTI | GATC | 9 cut(s) | 49, 182, 622, 737, 760, 916, 1672, 1927, 2464 |
| BstMAI | GTCTC | 2 cut(s) | 176, 1937 |
| BstMBI | GATC | 9 cut(s) | 46, 179, 619, 734, 757, 913, 1669, 1924, 2461 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 2697, 2817 |
| BstNI | CCWGG | 2 cut(s) | 1236, 2343 |
| BstNSI | RCATGY | 2 cut(s) | 579, 1975 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1858 |
| BstSCI | CCNGG | 2 cut(s) | 1234, 2341 |
| BstSFI | CTRYAG | 3 cut(s) | 625, 2635, 2692 |
| BstSNI | TACGTA | 1 cut(s) | 1244 |
| BstV1I | GCAGC | 2 cut(s) | 161, 511 |
| BstV2I | GAAGAC | 3 cut(s) | 1634, 2012, 2893 |
| BstX2I | RGATCY | 4 cut(s) | 46, 757, 913, 1669 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1870 |
| BstYI | RGATCY | 4 cut(s) | 46, 757, 913, 1669 |
| Bsu36I | CCTNAGG | 2 cut(s) | 327, 813 |
| BsuI | GTATCC | 2 cut(s) | 719, 1491 |
| BsuRI | GGCC | 3 cut(s) | 167, 1107, 1434 |
| BtgI | CCRYGG | 1 cut(s) | 2779 |
| BtgZI | GCGATG | 1 cut(s) | 69 |
| BtrI | CACGTC | 1 cut(s) | 893 |
| BtsCI | GGATG | 7 cut(s) | 550, 1039, 1317, 1706, 1757, 2436, 2492 |
| BtsIMutI | CAGTG | 4 cut(s) | 1001, 1648, 2364, 2793 |
| BveI | ACCTGC | 1 cut(s) | 2819 |
| Cac8I | GCNNGC | 3 cut(s) | 1331, 1351, 2756 |
| Cfr13I | GGNCC | 3 cut(s) | 1433, 1614, 2831 |
| CseI | GACGC | 1 cut(s) | 230 |
| Csp6I | GTAC | 4 cut(s) | 59, 1683, 2612, 2815 |
| CviQI | GTAC | 4 cut(s) | 59, 1683, 2612, 2815 |
| DpnI | GATC | 9 cut(s) | 48, 181, 621, 736, 759, 915, 1671, 1926, 2463 |
| DpnII | GATC | 9 cut(s) | 46, 179, 619, 734, 757, 913, 1669, 1924, 2461 |
| DraI | TTTAAA | 1 cut(s) | 2548 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 278 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 278 |
| EaeI | YGGCCR | 2 cut(s) | 165, 1105 |
| Eam1104I | CTCTTC | 4 cut(s) | 785, 1338, 1803, 2873 |
| EarI | CTCTTC | 4 cut(s) | 785, 1338, 1803, 2873 |
| Ecl136II | GAGCTC | 3 cut(s) | 202, 778, 2741 |
| Eco105I | TACGTA | 1 cut(s) | 1244 |
| Eco130I | CCWWGG | 2 cut(s) | 1869, 2482 |
| Eco24I | GRGCYC | 3 cut(s) | 204, 780, 2743 |
| Eco31I | GGTCTC | 1 cut(s) | 1937 |
| Eco32I | GATATC | 1 cut(s) | 1960 |
| Eco47I | GGWCC | 2 cut(s) | 1614, 2831 |
| Eco53kI | GAGCTC | 3 cut(s) | 202, 778, 2741 |
| Eco57I | CTGAAG | 3 cut(s) | 766, 1784, 1959 |
| Eco72I | CACGTG | 1 cut(s) | 2065 |
| Eco81I | CCTNAGG | 2 cut(s) | 327, 813 |
| Eco88I | CYCGRG | 2 cut(s) | 299, 2798 |
| EcoICRI | GAGCTC | 3 cut(s) | 202, 778, 2741 |
| EcoRI | GAATTC | 2 cut(s) | 1461, 2413 |
| EcoRII | CCWGG | 2 cut(s) | 1234, 2341 |
| EcoRV | GATATC | 1 cut(s) | 1960 |
| EcoT14I | CCWWGG | 2 cut(s) | 1869, 2482 |
| EcoT22I | ATGCAT | 2 cut(s) | 796, 1179 |
| EcoT38I | GRGCYC | 3 cut(s) | 204, 780, 2743 |
| ErhI | CCWWGG | 2 cut(s) | 1869, 2482 |
| FaqI | GGGAC | 3 cut(s) | 903, 1580, 2531 |
| FbaI | TGATCA | 1 cut(s) | 619 |
| FblI | GTMKAC | 1 cut(s) | 1240 |
| Fnu4HI | GCNGC | 2 cut(s) | 150, 500 |
| FokI | GGATG | 7 cut(s) | 557, 1046, 1304, 1693, 1764, 2443, 2499 |
| FriOI | GRGCYC | 3 cut(s) | 204, 780, 2743 |
| Fsp4HI | GCNGC | 2 cut(s) | 150, 500 |
| FspBI | CTAG | 8 cut(s) | 398, 482, 696, 917, 930, 1118, 1335, 2393 |
| GluI | GCNGC | 2 cut(s) | 150, 500 |
| GsuI | CTGGAG | 1 cut(s) | 1025 |
| HaeIII | GGCC | 3 cut(s) | 167, 1107, 1434 |
| HapII | CCGG | 2 cut(s) | 1431, 2312 |
| HgaI | GACGC | 1 cut(s) | 230 |
| HincII | GTYRAC | 2 cut(s) | 1696, 2245 |
| HindII | GTYRAC | 2 cut(s) | 1696, 2245 |
| HindIII | AAGCTT | 4 cut(s) | 76, 1727, 2048, 2698 |
| HpaII | CCGG | 2 cut(s) | 1431, 2312 |
| HphI | GGTGA | 3 cut(s) | 343, 2396, 2578 |
| Hpy166II | GTNNAC | 7 cut(s) | 1241, 1696, 1720, 2245, 2614, 2622, 2791 |
| Hpy8I | GTNNAC | 7 cut(s) | 1241, 1696, 1720, 2245, 2614, 2622, 2791 |
| Hpy99I | CGWCG | 1 cut(s) | 2825 |
| HpyAV | CCTTC | 6 cut(s) | 548, 1057, 1494, 1897, 1934, 2246 |
| HpyCH4III | ACNGT | 6 cut(s) | 63, 1399, 1682, 2157, 2662, 2788 |
| HpyCH4IV | ACGT | 6 cut(s) | 706, 892, 1243, 2064, 2124, 2618 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 2697, 2817 |
| HpySE526I | ACGT | 6 cut(s) | 706, 892, 1243, 2064, 2124, 2618 |
| Ksp22I | TGATCA | 1 cut(s) | 619 |
| Kzo9I | GATC | 9 cut(s) | 46, 179, 619, 734, 757, 913, 1669, 1924, 2461 |
| LguI | GCTCTTC | 1 cut(s) | 785 |
| LmnI | GCTCC | 3 cut(s) | 1066, 1943, 2738 |
| Lsp1109I | GCAGC | 2 cut(s) | 161, 511 |
| LweI | GCATC | 6 cut(s) | 197, 988, 1164, 1326, 1374, 2063 |
| MaeI | CTAG | 8 cut(s) | 398, 482, 696, 917, 930, 1118, 1335, 2393 |
| MaeII | ACGT | 6 cut(s) | 706, 892, 1243, 2064, 2124, 2618 |
| MaeIII | GTNAC | 6 cut(s) | 258, 1157, 2118, 2452, 2531, 2551 |
| MalI | GATC | 9 cut(s) | 48, 181, 621, 736, 759, 915, 1671, 1926, 2463 |
| MbiI | CCGCTC | 1 cut(s) | 2803 |
| MboI | GATC | 9 cut(s) | 46, 179, 619, 734, 757, 913, 1669, 1924, 2461 |
| MfeI | CAATTG | 1 cut(s) | 2227 |
| MflI | RGATCY | 4 cut(s) | 46, 757, 913, 1669 |
| MhlI | GDGCHC | 4 cut(s) | 204, 780, 2575, 2743 |
| MlsI | TGGCCA | 1 cut(s) | 167 |
| MluNI | TGGCCA | 1 cut(s) | 167 |
| MlyI | GAGTC | 9 cut(s) | 291, 1313, 1868, 1923, 1987, 2232, 2605, 2790, 2800 |
| MmeI | TCCRAC | 7 cut(s) | 262, 628, 742, 989, 1534, 1641, 1647 |
| Mox20I | TGGCCA | 1 cut(s) | 167 |
| Mph1103I | ATGCAT | 2 cut(s) | 796, 1179 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1209, 2272 |
| MscI | TGGCCA | 1 cut(s) | 167 |
| Msp20I | TGGCCA | 1 cut(s) | 167 |
| MspA1I | CMGCKG | 1 cut(s) | 1804 |
| MspI | CCGG | 2 cut(s) | 1431, 2312 |
| MspR9I | CCNGG | 2 cut(s) | 1236, 2343 |
| MunI | CAATTG | 1 cut(s) | 2227 |
| Mva1269I | GAATGC | 1 cut(s) | 794 |
| MvaI | CCWGG | 2 cut(s) | 1236, 2343 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 2697, 2817 |
| NdeII | GATC | 9 cut(s) | 46, 179, 619, 734, 757, 913, 1669, 1924, 2461 |
| NlaIV | GGNNCC | 4 cut(s) | 48, 559, 1435, 1615 |
| NmuCI | GTSAC | 1 cut(s) | 258 |
| NsiI | ATGCAT | 2 cut(s) | 796, 1179 |
| NspI | RCATGY | 2 cut(s) | 579, 1975 |
| PaeR7I | CTCGAG | 1 cut(s) | 2798 |
| PciSI | GCTCTTC | 1 cut(s) | 785 |
| PctI | GAATGC | 1 cut(s) | 794 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1209, 2272 |
| PfeI | GAWTC | 8 cut(s) | 681, 1220, 1603, 1654, 1793, 2304, 2387, 2861 |
| PfoI | TCCNGGA | 1 cut(s) | 2341 |
| PkrI | GCNGC | 2 cut(s) | 151, 501 |
| PleI | GAGTC | 9 cut(s) | 291, 1312, 1867, 1922, 1987, 2232, 2604, 2790, 2800 |
| PmaCI | CACGTG | 1 cut(s) | 2065 |
| PmlI | CACGTG | 1 cut(s) | 2065 |
| PpsI | GAGTC | 9 cut(s) | 291, 1312, 1867, 1922, 1987, 2232, 2604, 2790, 2800 |
| Ppu21I | YACGTR | 3 cut(s) | 1244, 2065, 2125 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1858 |
| PshBI | ATTAAT | 1 cut(s) | 1073 |
| Psp124BI | GAGCTC | 3 cut(s) | 204, 780, 2743 |
| Psp6I | CCWGG | 2 cut(s) | 1234, 2341 |
| PspCI | CACGTG | 1 cut(s) | 2065 |
| PspGI | CCWGG | 2 cut(s) | 1234, 2341 |
| PspN4I | GGNNCC | 4 cut(s) | 48, 559, 1435, 1615 |
| PspPI | GGNCC | 3 cut(s) | 1433, 1614, 2831 |
| PspXI | VCTCGAGB | 1 cut(s) | 2798 |
| PsuI | RGATCY | 4 cut(s) | 46, 757, 913, 1669 |
| PvuII | CAGCTG | 1 cut(s) | 1804 |
| RsaI | GTAC | 4 cut(s) | 60, 1684, 2613, 2816 |
| RsaNI | GTAC | 4 cut(s) | 59, 1683, 2612, 2815 |
| SacI | GAGCTC | 3 cut(s) | 204, 780, 2743 |
| SapI | GCTCTTC | 1 cut(s) | 785 |
| SatI | GCNGC | 2 cut(s) | 150, 500 |
| Sau3AI | GATC | 9 cut(s) | 46, 179, 619, 734, 757, 913, 1669, 1924, 2461 |
| Sau96I | GGNCC | 3 cut(s) | 1433, 1614, 2831 |
| SchI | GAGTC | 9 cut(s) | 291, 1313, 1868, 1923, 1987, 2232, 2605, 2790, 2800 |
| ScrFI | CCNGG | 2 cut(s) | 1236, 2343 |
| SduI | GDGCHC | 4 cut(s) | 204, 780, 2575, 2743 |
| SfaNI | GCATC | 6 cut(s) | 197, 988, 1164, 1326, 1374, 2063 |
| SfcI | CTRYAG | 3 cut(s) | 625, 2635, 2692 |
| Sfr274I | CTCGAG | 1 cut(s) | 2798 |
| SinI | GGWCC | 2 cut(s) | 1614, 2831 |
| SlaI | CTCGAG | 1 cut(s) | 2798 |
| SmlI | CTYRAG | 6 cut(s) | 84, 517, 773, 1354, 2051, 2798 |
| SmoI | CTYRAG | 6 cut(s) | 84, 517, 773, 1354, 2051, 2798 |
| SnaBI | TACGTA | 1 cut(s) | 1244 |
| SpeI | ACTAGT | 1 cut(s) | 2392 |
| SsiI | CCGC | 2 cut(s) | 1321, 2803 |
| SspI | AATATT | 2 cut(s) | 642, 2332 |
| SspMI | CTAG | 8 cut(s) | 398, 482, 696, 917, 930, 1118, 1335, 2393 |
| SstI | GAGCTC | 3 cut(s) | 204, 780, 2743 |
| StyD4I | CCNGG | 2 cut(s) | 1234, 2341 |
| StyI | CCWWGG | 2 cut(s) | 1869, 2482 |
| TaaI | ACNGT | 6 cut(s) | 63, 1399, 1682, 2157, 2662, 2788 |
| TaiI | ACGT | 6 cut(s) | 709, 895, 1246, 2067, 2127, 2621 |
| TaqI | TCGA | 6 cut(s) | 636, 1379, 1404, 2171, 2499, 2799 |
| TatI | WGTACW | 2 cut(s) | 2611, 2814 |
| TfiI | GAWTC | 8 cut(s) | 681, 1220, 1603, 1654, 1793, 2304, 2387, 2861 |
| TscAI | CASTG | 4 cut(s) | 1008, 1648, 2364, 2793 |
| TseFI | GTSAC | 1 cut(s) | 258 |
| TseI | GCWGC | 2 cut(s) | 149, 499 |
| Tsp45I | GTSAC | 1 cut(s) | 258 |
| TspDTI | ATGAA | 9 cut(s) | 29, 117, 556, 561, 1265, 1616, 2265, 2406, 2667 |
| TspGWI | ACGGA | 7 cut(s) | 39, 1301, 1584, 1700, 2094, 2535, 2796 |
| TspRI | CASTG | 4 cut(s) | 1008, 1648, 2364, 2793 |
| VpaK11BI | GGWCC | 2 cut(s) | 1614, 2831 |
| VspI | ATTAAT | 1 cut(s) | 1073 |
| XapI | RAATTY | 9 cut(s) | 411, 954, 1406, 1461, 1516, 2036, 2324, 2352, 2413 |
| XceI | RCATGY | 2 cut(s) | 579, 1975 |
| XhoI | CTCGAG | 1 cut(s) | 2798 |
| XmiI | GTMKAC | 1 cut(s) | 1240 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1209, 2272 |
| XspI | CTAG | 8 cut(s) | 398, 482, 696, 917, 930, 1118, 1335, 2393 |
| Zsp2I | ATGCAT | 2 cut(s) | 796, 1179 |