TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 12 - 188 | 1.3e-53 | TIR domain |
| TIR_2 | PF13676 | 15 - 111 | 7.8e-16 | TIR domain |
| NB-ARC | PF00931 | 206 - 360 | 7.7e-20 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 428 - 498 | 9.4e-19 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 571 - 675 | 7.8e-13 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 595 - 681 | 7.3e-09 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 663 - 725 | 7e-07 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 751 - 826 | 1.6e-09 | Leucine-rich repeat region |
| LRR_8 | PF13855 | 761 - 817 | 7e-09 | Leucine rich repeat |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 624 |
| AccB1I | GGYRCC | 1 cut(s) | 2448 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1465 |
| AccBSI | CCGCTC | 1 cut(s) | 680 |
| AccI | GTMKAC | 1 cut(s) | 242 |
| AciI | CCGC | 9 cut(s) | 415, 625, 651, 680, 837, 1326, 2452, 2506, 2600 |
| AclWI | GGATC | 3 cut(s) | 134, 320, 1450 |
| AcoI | YGGCCR | 1 cut(s) | 2410 |
| AcsI | RAATTY | 6 cut(s) | 270, 463, 567, 704, 1028, 1242 |
| AcuI | CTGAAG | 5 cut(s) | 459, 1034, 1110, 1554, 2444 |
| AcyI | GRCGYC | 1 cut(s) | 621 |
| AfaI | GTAC | 5 cut(s) | 339, 1161, 1675, 1776, 2551 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 846, 1465 |
| AflII | CTTAAG | 1 cut(s) | 1826 |
| AflIII | ACRYGT | 1 cut(s) | 1546 |
| AhlI | ACTAGT | 1 cut(s) | 1565 |
| AjnI | CCWGG | 3 cut(s) | 1504, 1696, 1978 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 546, 578, 924, 956, 2145, 2177 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1380, 1412 |
| Alw21I | GWGCWC | 2 cut(s) | 8, 17 |
| Alw26I | GTCTC | 3 cut(s) | 732, 764, 1145 |
| AlwI | GGATC | 3 cut(s) | 134, 320, 1450 |
| AoxI | GGCC | 2 cut(s) | 1273, 2410 |
| ApeKI | GCWGC | 3 cut(s) | 185, 304, 2537 |
| ApoI | RAATTY | 6 cut(s) | 270, 463, 567, 704, 1028, 1242 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2221, 2253 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1070, 1098, 2433 |
| AspLEI | GCGC | 1 cut(s) | 1515 |
| AsuHPI | GGTGA | 2 cut(s) | 12, 374 |
| AsuII | TTCGAA | 1 cut(s) | 2227 |
| BanI | GGYRCC | 1 cut(s) | 2448 |
| BanII | GRGCYC | 2 cut(s) | 17, 1169 |
| BbsI | GAAGAC | 4 cut(s) | 1298, 1441, 1542, 1967 |
| Bbv12I | GWGCWC | 2 cut(s) | 8, 17 |
| BbvI | GCAGC | 3 cut(s) | 172, 291, 2549 |
| BccI | CCATC | 2 cut(s) | 99, 1265 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1358, 1392, 1859, 1893 |
| BciT130I | CCWGG | 3 cut(s) | 1506, 1698, 1980 |
| BciVI | GTATCC | 1 cut(s) | 61 |
| BclI | TGATCA | 2 cut(s) | 1036, 1359 |
| BcoDI | GTCTC | 3 cut(s) | 732, 764, 1145 |
| BcuI | ACTAGT | 1 cut(s) | 1565 |
| BfaI | CTAG | 9 cut(s) | 972, 1220, 1277, 1304, 1566, 1754, 2265, 2421, 2544 |
| BfrI | CTTAAG | 1 cut(s) | 1826 |
| BfuI | GTATCC | 1 cut(s) | 61 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1510 |
| BglII | AGATCT | 4 cut(s) | 425, 1186, 1409, 2011 |
| BisI | GCNGC | 5 cut(s) | 186, 305, 837, 2452, 2538 |
| BlsI | GCNGC | 5 cut(s) | 187, 306, 838, 2453, 2539 |
| BmcAI | AGTACT | 2 cut(s) | 1161, 2551 |
| Bme1390I | CCNGG | 3 cut(s) | 1506, 1698, 1980 |
| BmiI | GGNNCC | 2 cut(s) | 835, 2450 |
| BmrFI | CCNGG | 3 cut(s) | 1506, 1698, 1980 |
| BmrI | ACTGGG | 2 cut(s) | 1172, 2325 |
| BmsI | GCATC | 7 cut(s) | 245, 592, 1867, 2333, 2524, 2549, 2611 |
| BmuI | ACTGGG | 2 cut(s) | 1172, 2325 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1848 |
| BpiI | GAAGAC | 4 cut(s) | 1298, 1441, 1542, 1967 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 193, 225, 680, 712, 682, 714 |
| BpmI | CTGGAG | 1 cut(s) | 156 |
| Bpu10I | CCTNAGC | 1 cut(s) | 144 |
| Bpu14I | TTCGAA | 1 cut(s) | 2227 |
| BpuEI | CTTGAG | 4 cut(s) | 559, 1670, 1969, 2486 |
| BsaAI | YACGTR | 1 cut(s) | 1778 |
| BsaBI | GATNNNNATC | 3 cut(s) | 324, 1358, 2016 |
| BsaHI | GRCGYC | 1 cut(s) | 621 |
| BsaI | GGTCTC | 2 cut(s) | 764, 1145 |
| BsaJI | CCNNGG | 4 cut(s) | 26, 1696, 1697, 2161 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 846, 1465 |
| Bse1I | ACTGG | 3 cut(s) | 587, 1167, 2331 |
| Bse3DI | GCAATG | 1 cut(s) | 2465 |
| Bse8I | GATNNNNATC | 3 cut(s) | 324, 1358, 2016 |
| BseBI | CCWGG | 3 cut(s) | 1506, 1698, 1980 |
| BseDI | CCNNGG | 4 cut(s) | 26, 1696, 1697, 2161 |
| BseGI | GGATG | 6 cut(s) | 115, 142, 583, 2174, 2348, 2602 |
| BseJI | GATNNNNATC | 3 cut(s) | 324, 1358, 2016 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 846, 1465 |
| BseMI | GCAATG | 1 cut(s) | 2465 |
| BseMII | CTCAG | 4 cut(s) | 135, 468, 1609, 2391 |
| BseNI | ACTGG | 3 cut(s) | 587, 1167, 2331 |
| BseRI | GAGGAG | 2 cut(s) | 15, 862 |
| BseXI | GCAGC | 3 cut(s) | 172, 291, 2549 |
| Bsh1285I | CGRYCG | 1 cut(s) | 2183 |
| BshFI | GGCC | 2 cut(s) | 1275, 2412 |
| BshNI | GGYRCC | 1 cut(s) | 2448 |
| BsiEI | CGRYCG | 1 cut(s) | 2183 |
| BsiHKAI | GWGCWC | 2 cut(s) | 8, 17 |
| BsiSI | CCGG | 2 cut(s) | 2246, 2471 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 846, 1465 |
| BsmAI | GTCTC | 3 cut(s) | 732, 764, 1145 |
| BsmI | GAATGC | 2 cut(s) | 1070, 1449 |
| BsnI | GGCC | 2 cut(s) | 1275, 2412 |
| Bso31I | GGTCTC | 2 cut(s) | 764, 1145 |
| Bsp119I | TTCGAA | 1 cut(s) | 2227 |
| Bsp1286I | GDGCHC | 3 cut(s) | 8, 17, 1169 |
| Bsp1407I | TGTACA | 1 cut(s) | 1673 |
| Bsp143I | GATC | 9 cut(s) | 139, 325, 425, 1036, 1186, 1359, 1409, 1455, 2011 |
| BspACI | CCGC | 9 cut(s) | 415, 625, 651, 680, 837, 1326, 2452, 2506, 2600 |
| BspANI | GGCC | 2 cut(s) | 1275, 2412 |
| BspCNI | CTCAG | 4 cut(s) | 136, 467, 1608, 2392 |
| BspHI | TCATGA | 2 cut(s) | 700, 826 |
| BspLI | GGNNCC | 2 cut(s) | 835, 2450 |
| BspPI | GGATC | 3 cut(s) | 134, 320, 1450 |
| BspQI | GCTCTTC | 1 cut(s) | 22 |
| BspT104I | TTCGAA | 1 cut(s) | 2227 |
| BspT107I | GGYRCC | 1 cut(s) | 2448 |
| BspTI | CTTAAG | 1 cut(s) | 1826 |
| BspTNI | GGTCTC | 2 cut(s) | 764, 1145 |
| BsrBI | CCGCTC | 1 cut(s) | 680 |
| BsrDI | GCAATG | 1 cut(s) | 2465 |
| BsrGI | TGTACA | 1 cut(s) | 1673 |
| BsrI | ACTGG | 3 cut(s) | 587, 1167, 2331 |
| BssECI | CCNNGG | 4 cut(s) | 26, 1696, 1697, 2161 |
| BssMI | GATC | 9 cut(s) | 139, 325, 425, 1036, 1186, 1359, 1409, 1455, 2011 |
| BssNI | GRCGYC | 1 cut(s) | 621 |
| BssT1I | CCWWGG | 1 cut(s) | 2161 |
| Bst2UI | CCWGG | 3 cut(s) | 1506, 1698, 1980 |
| Bst4CI | ACNGT | 6 cut(s) | 545, 1205, 1423, 1588, 1726, 2181 |
| Bst6I | CTCTTC | 6 cut(s) | 22, 927, 1053, 1177, 1219, 1281 |
| BstACI | GRCGYC | 1 cut(s) | 621 |
| BstAFI | CTTAAG | 1 cut(s) | 1826 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 182, 2561 |
| BstAUI | TGTACA | 1 cut(s) | 1673 |
| BstBAI | YACGTR | 1 cut(s) | 1778 |
| BstBI | TTCGAA | 1 cut(s) | 2227 |
| BstC8I | GCNNGC | 5 cut(s) | 1511, 1530, 1768, 1922, 2456 |
| BstDEI | CTNAG | 6 cut(s) | 144, 454, 1190, 1595, 2303, 2400 |
| BstEII | GGTNACC | 1 cut(s) | 1082 |
| BstF5I | GGATG | 6 cut(s) | 115, 142, 583, 2174, 2348, 2602 |
| BstHHI | GCGC | 1 cut(s) | 1515 |
| BstKTI | GATC | 9 cut(s) | 142, 328, 428, 1039, 1189, 1362, 1412, 1458, 2014 |
| BstMAI | GTCTC | 3 cut(s) | 732, 764, 1145 |
| BstMBI | GATC | 9 cut(s) | 139, 325, 425, 1036, 1186, 1359, 1409, 1455, 2011 |
| BstMCI | CGRYCG | 1 cut(s) | 2183 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 12, 182, 296, 1323, 1510, 1917, 2561 |
| BstNI | CCWGG | 3 cut(s) | 1506, 1698, 1980 |
| BstNSI | RCATGY | 2 cut(s) | 1550, 1924 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1848 |
| BstPI | GGTNACC | 1 cut(s) | 1082 |
| BstSCI | CCNGG | 3 cut(s) | 1504, 1696, 1978 |
| BstV1I | GCAGC | 3 cut(s) | 172, 291, 2549 |
| BstV2I | GAAGAC | 4 cut(s) | 1298, 1441, 1542, 1967 |
| BstX2I | RGATCY | 4 cut(s) | 425, 1186, 1409, 2011 |
| BstYI | RGATCY | 4 cut(s) | 425, 1186, 1409, 2011 |
| BsuI | GTATCC | 1 cut(s) | 61 |
| BsuRI | GGCC | 2 cut(s) | 1275, 2412 |
| BtgZI | GCGATG | 1 cut(s) | 411 |
| BtsCI | GGATG | 6 cut(s) | 115, 142, 583, 2174, 2348, 2602 |
| BtsI | GCAGTG | 3 cut(s) | 99, 1777, 1990 |
| BtsIMutI | CAGTG | 5 cut(s) | 99, 1210, 1777, 1990, 2338 |
| Cac8I | GCNNGC | 5 cut(s) | 1511, 1530, 1768, 1922, 2456 |
| CciI | TCATGA | 2 cut(s) | 700, 826 |
| CfoI | GCGC | 1 cut(s) | 1515 |
| Csp6I | GTAC | 5 cut(s) | 338, 1160, 1674, 1775, 2550 |
| CviQI | GTAC | 5 cut(s) | 338, 1160, 1674, 1775, 2550 |
| DdeI | CTNAG | 6 cut(s) | 144, 454, 1190, 1595, 2303, 2400 |
| DpnI | GATC | 9 cut(s) | 141, 327, 427, 1038, 1188, 1361, 1411, 1457, 2013 |
| DpnII | GATC | 9 cut(s) | 139, 325, 425, 1036, 1186, 1359, 1409, 1455, 2011 |
| DraI | TTTAAA | 2 cut(s) | 1633, 2617 |
| EaeI | YGGCCR | 1 cut(s) | 2410 |
| Eam1104I | CTCTTC | 6 cut(s) | 22, 927, 1053, 1177, 1219, 1281 |
| EarI | CTCTTC | 6 cut(s) | 22, 927, 1053, 1177, 1219, 1281 |
| Ecl136II | GAGCTC | 1 cut(s) | 15 |
| Eco130I | CCWWGG | 1 cut(s) | 2161 |
| Eco24I | GRGCYC | 2 cut(s) | 17, 1169 |
| Eco31I | GGTCTC | 2 cut(s) | 764, 1145 |
| Eco53kI | GAGCTC | 1 cut(s) | 15 |
| Eco57I | CTGAAG | 5 cut(s) | 459, 1034, 1110, 1554, 2444 |
| Eco91I | GGTNACC | 1 cut(s) | 1082 |
| EcoICRI | GAGCTC | 1 cut(s) | 15 |
| EcoO65I | GGTNACC | 1 cut(s) | 1082 |
| EcoRI | GAATTC | 2 cut(s) | 270, 463 |
| EcoRII | CCWGG | 3 cut(s) | 1504, 1696, 1978 |
| EcoT14I | CCWWGG | 1 cut(s) | 2161 |
| EcoT22I | ATGCAT | 1 cut(s) | 238 |
| EcoT38I | GRGCYC | 2 cut(s) | 17, 1169 |
| ErhI | CCWWGG | 1 cut(s) | 2161 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1086, 1118, 2495, 2527 |
| FauI | CCCGC | 2 cut(s) | 644, 2499 |
| FbaI | TGATCA | 2 cut(s) | 1036, 1359 |
| FblI | GTMKAC | 1 cut(s) | 242 |
| Fnu4HI | GCNGC | 5 cut(s) | 186, 305, 837, 2452, 2538 |
| FokI | GGATG | 6 cut(s) | 122, 149, 570, 2181, 2355, 2589 |
| FriOI | GRGCYC | 2 cut(s) | 17, 1169 |
| Fsp4HI | GCNGC | 5 cut(s) | 186, 305, 837, 2452, 2538 |
| FspBI | CTAG | 9 cut(s) | 972, 1220, 1277, 1304, 1566, 1754, 2265, 2421, 2544 |
| GlaI | GCGC | 1 cut(s) | 1514 |
| GluI | GCNGC | 5 cut(s) | 186, 305, 837, 2452, 2538 |
| GsuI | CTGGAG | 1 cut(s) | 156 |
| HaeIII | GGCC | 2 cut(s) | 1275, 2412 |
| HapII | CCGG | 2 cut(s) | 2246, 2471 |
| HhaI | GCGC | 1 cut(s) | 1515 |
| Hin1I | GRCGYC | 1 cut(s) | 621 |
| Hin6I | GCGC | 1 cut(s) | 1513 |
| HinP1I | GCGC | 1 cut(s) | 1513 |
| HincII | GTYRAC | 3 cut(s) | 243, 1618, 1693 |
| HindII | GTYRAC | 3 cut(s) | 243, 1618, 1693 |
| HindIII | AAGCTT | 3 cut(s) | 2036, 2084, 2456 |
| HpaII | CCGG | 2 cut(s) | 2246, 2471 |
| HphI | GGTGA | 2 cut(s) | 12, 374 |
| Hpy166II | GTNNAC | 6 cut(s) | 243, 895, 1618, 1676, 1693, 1775 |
| Hpy188I | TCNGA | 4 cut(s) | 269, 820, 2323, 2463 |
| Hpy8I | GTNNAC | 6 cut(s) | 243, 895, 1618, 1676, 1693, 1775 |
| Hpy99I | CGWCG | 2 cut(s) | 244, 1488 |
| HpyAV | CCTTC | 8 cut(s) | 731, 824, 833, 1012, 1661, 1922, 2130, 2292 |
| HpyCH4III | ACNGT | 6 cut(s) | 545, 1205, 1423, 1588, 1726, 2181 |
| HpyCH4IV | ACGT | 4 cut(s) | 606, 621, 1539, 1777 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 12, 182, 296, 1323, 1510, 1917, 2561 |
| HpyF3I | CTNAG | 6 cut(s) | 144, 454, 1190, 1595, 2303, 2400 |
| HpySE526I | ACGT | 4 cut(s) | 606, 621, 1539, 1777 |
| Hsp92I | GRCGYC | 1 cut(s) | 621 |
| HspAI | GCGC | 1 cut(s) | 1513 |
| Ksp22I | TGATCA | 2 cut(s) | 1036, 1359 |
| Kzo9I | GATC | 9 cut(s) | 139, 325, 425, 1036, 1186, 1359, 1409, 1455, 2011 |
| LguI | GCTCTTC | 1 cut(s) | 22 |
| LmnI | GCTCC | 2 cut(s) | 833, 2473 |
| Lsp1109I | GCAGC | 3 cut(s) | 172, 291, 2549 |
| LweI | GCATC | 7 cut(s) | 245, 592, 1867, 2333, 2524, 2549, 2611 |
| MaeI | CTAG | 9 cut(s) | 972, 1220, 1277, 1304, 1566, 1754, 2265, 2421, 2544 |
| MaeII | ACGT | 4 cut(s) | 606, 621, 1539, 1777 |
| MaeIII | GTNAC | 6 cut(s) | 860, 1082, 1232, 1345, 2237, 2306 |
| MalI | GATC | 9 cut(s) | 141, 327, 427, 1038, 1188, 1361, 1411, 1457, 2013 |
| MbiI | CCGCTC | 1 cut(s) | 680 |
| MboI | GATC | 9 cut(s) | 139, 325, 425, 1036, 1186, 1359, 1409, 1455, 2011 |
| MfeI | CAATTG | 1 cut(s) | 2556 |
| MflI | RGATCY | 4 cut(s) | 425, 1186, 1409, 2011 |
| MhlI | GDGCHC | 3 cut(s) | 8, 17, 1169 |
| MlyI | GAGTC | 2 cut(s) | 734, 1236 |
| MmeI | TCCRAC | 2 cut(s) | 544, 2504 |
| Mph1103I | ATGCAT | 1 cut(s) | 238 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1070, 1098, 2433 |
| MslI | CAYNNNNRTG | 1 cut(s) | 2523 |
| MspCI | CTTAAG | 1 cut(s) | 1826 |
| MspI | CCGG | 2 cut(s) | 2246, 2471 |
| MspR9I | CCNGG | 3 cut(s) | 1506, 1698, 1980 |
| MunI | CAATTG | 1 cut(s) | 2556 |
| Mva1269I | GAATGC | 2 cut(s) | 1070, 1449 |
| MvaI | CCWGG | 3 cut(s) | 1506, 1698, 1980 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 12, 182, 296, 1323, 1510, 1917, 2561 |
| NdeII | GATC | 9 cut(s) | 139, 325, 425, 1036, 1186, 1359, 1409, 1455, 2011 |
| NlaIV | GGNNCC | 2 cut(s) | 835, 2450 |
| NmuCI | GTSAC | 3 cut(s) | 860, 2237, 2306 |
| NsiI | ATGCAT | 1 cut(s) | 238 |
| NspI | RCATGY | 2 cut(s) | 1550, 1924 |
| NspV | TTCGAA | 1 cut(s) | 2227 |
| PaeI | GCATGC | 1 cut(s) | 1924 |
| PagI | TCATGA | 2 cut(s) | 700, 826 |
| PasI | CCCWGGG | 1 cut(s) | 1697 |
| PciI | ACATGT | 1 cut(s) | 1546 |
| PciSI | GCTCTTC | 1 cut(s) | 22 |
| PctI | GAATGC | 2 cut(s) | 1070, 1449 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1070, 1098, 2433 |
| PfeI | GAWTC | 8 cut(s) | 120, 197, 482, 693, 1043, 1490, 1609, 2299 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1465 |
| PkrI | GCNGC | 5 cut(s) | 187, 306, 838, 2453, 2539 |
| PleI | GAGTC | 2 cut(s) | 734, 1235 |
| PpsI | GAGTC | 2 cut(s) | 734, 1235 |
| Ppu21I | YACGTR | 1 cut(s) | 1778 |
| PscI | ACATGT | 1 cut(s) | 1546 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1848 |
| Psp124BI | GAGCTC | 1 cut(s) | 17 |
| Psp6I | CCWGG | 3 cut(s) | 1504, 1696, 1978 |
| PspEI | GGTNACC | 1 cut(s) | 1082 |
| PspGI | CCWGG | 3 cut(s) | 1504, 1696, 1978 |
| PspN4I | GGNNCC | 2 cut(s) | 835, 2450 |
| PsuI | RGATCY | 4 cut(s) | 425, 1186, 1409, 2011 |
| RsaI | GTAC | 5 cut(s) | 339, 1161, 1675, 1776, 2551 |
| RsaNI | GTAC | 5 cut(s) | 338, 1160, 1674, 1775, 2550 |
| RseI | CAYNNNNRTG | 1 cut(s) | 2523 |
| SacI | GAGCTC | 1 cut(s) | 17 |
| SalI | GTCGAC | 1 cut(s) | 241 |
| SapI | GCTCTTC | 1 cut(s) | 22 |
| SatI | GCNGC | 5 cut(s) | 186, 305, 837, 2452, 2538 |
| Sau3AI | GATC | 9 cut(s) | 139, 325, 425, 1036, 1186, 1359, 1409, 1455, 2011 |
| ScaI | AGTACT | 2 cut(s) | 1161, 2551 |
| SchI | GAGTC | 2 cut(s) | 734, 1236 |
| ScrFI | CCNGG | 3 cut(s) | 1506, 1698, 1980 |
| SduI | GDGCHC | 3 cut(s) | 8, 17, 1169 |
| SfaNI | GCATC | 7 cut(s) | 245, 592, 1867, 2333, 2524, 2549, 2611 |
| SfuI | TTCGAA | 1 cut(s) | 2227 |
| SmiI | ATTTAAAT | 1 cut(s) | 2617 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 2523 |
| SmlI | CTYRAG | 5 cut(s) | 574, 1649, 1826, 1948, 2501 |
| SmoI | CTYRAG | 5 cut(s) | 574, 1649, 1826, 1948, 2501 |
| SpeI | ACTAGT | 1 cut(s) | 1565 |
| SphI | GCATGC | 1 cut(s) | 1924 |
| SsiI | CCGC | 9 cut(s) | 415, 625, 651, 680, 837, 1326, 2452, 2506, 2600 |
| SspI | AATATT | 2 cut(s) | 917, 1299 |
| SspMI | CTAG | 9 cut(s) | 972, 1220, 1277, 1304, 1566, 1754, 2265, 2421, 2544 |
| SstI | GAGCTC | 1 cut(s) | 17 |
| StyD4I | CCNGG | 3 cut(s) | 1504, 1696, 1978 |
| StyI | CCWWGG | 1 cut(s) | 2161 |
| SwaI | ATTTAAAT | 1 cut(s) | 2617 |
| TaaI | ACNGT | 6 cut(s) | 545, 1205, 1423, 1588, 1726, 2181 |
| TaiI | ACGT | 4 cut(s) | 609, 624, 1542, 1780 |
| TaqI | TCGA | 5 cut(s) | 73, 200, 242, 1869, 2227 |
| TaqII | GACCGA | 1 cut(s) | 1356 |
| TatI | WGTACW | 3 cut(s) | 1159, 1673, 2549 |
| TauI | GCSGC | 2 cut(s) | 839, 2454 |
| TfiI | GAWTC | 8 cut(s) | 120, 197, 482, 693, 1043, 1490, 1609, 2299 |
| TscAI | CASTG | 5 cut(s) | 106, 1210, 1777, 1990, 2338 |
| TseFI | GTSAC | 3 cut(s) | 860, 2237, 2306 |
| TseI | GCWGC | 3 cut(s) | 185, 304, 2537 |
| Tsp45I | GTSAC | 3 cut(s) | 860, 2237, 2306 |
| TspGWI | ACGGA | 2 cut(s) | 733, 1472 |
| TspRI | CASTG | 5 cut(s) | 106, 1210, 1777, 1990, 2338 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1465 |
| Vha464I | CTTAAG | 1 cut(s) | 1826 |
| XapI | RAATTY | 6 cut(s) | 270, 463, 567, 704, 1028, 1242 |
| XbaI | TCTAGA | 1 cut(s) | 2420 |
| XceI | RCATGY | 2 cut(s) | 1550, 1924 |
| XmiI | GTMKAC | 1 cut(s) | 242 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1070, 1098, 2433 |
| XspI | CTAG | 9 cut(s) | 972, 1220, 1277, 1304, 1566, 1754, 2265, 2421, 2544 |
| ZraI | GACGTC | 1 cut(s) | 622 |
| ZrmI | AGTACT | 2 cut(s) | 1161, 2551 |
| Zsp2I | ATGCAT | 1 cut(s) | 238 |