TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| NB-ARC | PF00931 | 23 - 178 | 3.6e-19 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 246 - 317 | 1.7e-14 | Disease resistance protein Roq1-like, winged-helix domain |
| TIR | PF01582 | 465 - 531 | 3e-08 | TIR domain |
| NB-ARC | PF00931 | 541 - 705 | 1.7e-20 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 772 - 846 | 8.2e-19 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 986 - 1091 | 1.6e-06 | Leucine-rich repeat region |
| C-JID | PF20160 | 1248 - 1386 | 2.7e-16 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 4323 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 821 |
| Acc36I | ACCTGC | 1 cut(s) | 655 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1216, 4111 |
| AccI | GTMKAC | 1 cut(s) | 3007 |
| AccIII | TCCGGA | 2 cut(s) | 3457, 3760 |
| AciI | CCGC | 3 cut(s) | 985, 2624, 3880 |
| AclWI | GGATC | 1 cut(s) | 2206 |
| AcsI | RAATTY | 9 cut(s) | 696, 1187, 1311, 1507, 2274, 2704, 3756, 4082, 4206 |
| AcuI | CTGAAG | 6 cut(s) | 488, 511, 2066, 2947, 2969, 3668 |
| AcyI | GRCGYC | 1 cut(s) | 2819 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 1216, 1367, 2578, 4111 |
| AflIII | ACRYGT | 3 cut(s) | 267, 818, 2641 |
| AgeI | ACCGGT | 1 cut(s) | 3892 |
| AjiI | CACGTC | 2 cut(s) | 268, 2593 |
| AjnI | CCWGG | 4 cut(s) | 477, 961, 2548, 3745 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 373, 405, 1956, 1988 |
| Alw21I | GWGCWC | 2 cut(s) | 1539, 2742 |
| Alw26I | GTCTC | 5 cut(s) | 599, 1386, 1426, 2177, 2276 |
| Alw44I | GTGCAC | 1 cut(s) | 2738 |
| AlwI | GGATC | 1 cut(s) | 2206 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 811, 887, 2465 |
| Ama87I | CYCGRG | 1 cut(s) | 2756 |
| Aor13HI | TCCGGA | 2 cut(s) | 3457, 3760 |
| AoxI | GGCC | 7 cut(s) | 925, 1207, 1369, 2512, 3181, 4102, 4264 |
| ApaLI | GTGCAC | 1 cut(s) | 2738 |
| ApoI | RAATTY | 9 cut(s) | 696, 1187, 1311, 1507, 2274, 2704, 3756, 4082, 4206 |
| ArsI | GACNNNNNNTTYG | 6 cut(s) | 3258, 3290, 3524, 3556, 3956, 3988 |
| AsiGI | ACCGGT | 1 cut(s) | 3892 |
| Asp700I | GAANNNNTTC | 5 cut(s) | 501, 752, 936, 2079, 2523 |
| AspLEI | GCGC | 3 cut(s) | 2559, 2862, 3608 |
| AsuC2I | CCSGG | 2 cut(s) | 2679, 3718 |
| AsuHPI | GGTGA | 9 cut(s) | 428, 472, 698, 1103, 1408, 2006, 2903, 3646, 3998 |
| AsuII | TTCGAA | 1 cut(s) | 3256 |
| AvaI | CYCGRG | 1 cut(s) | 2756 |
| AvaII | GGWCC | 8 cut(s) | 475, 1237, 1397, 1936, 2053, 2219, 3293, 4295 |
| AxyI | CCTNAGG | 2 cut(s) | 2541, 3086 |
| BaeGI | GKGCMC | 1 cut(s) | 2742 |
| BanII | GRGCYC | 1 cut(s) | 1539 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 2619, 2651, 2991, 3023 |
| BauI | CACGAG | 1 cut(s) | 3944 |
| BbsI | GAAGAC | 5 cut(s) | 1134, 1971, 2957, 3245, 4029 |
| Bbv12I | GWGCWC | 2 cut(s) | 1539, 2742 |
| BbvCI | CCTCAGC | 1 cut(s) | 4332 |
| BccI | CCATC | 4 cut(s) | 1037, 2297, 2720, 3932 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 307, 341, 1623, 1657 |
| BciT130I | CCWGG | 4 cut(s) | 479, 963, 2550, 3747 |
| BclI | TGATCA | 2 cut(s) | 1735, 3772 |
| BcnI | CCSGG | 2 cut(s) | 2679, 3718 |
| BcoDI | GTCTC | 5 cut(s) | 599, 1386, 1426, 2177, 2276 |
| BfmI | CTRYAG | 2 cut(s) | 1519, 1557 |
| BfuAI | ACCTGC | 1 cut(s) | 655 |
| BglII | AGATCT | 4 cut(s) | 467, 863, 2441, 2977 |
| BmcAI | AGTACT | 7 cut(s) | 135, 1728, 1949, 2388, 2637, 2840, 2850 |
| Bme1390I | CCNGG | 6 cut(s) | 479, 963, 2550, 2679, 3718, 3747 |
| Bme18I | GGWCC | 8 cut(s) | 475, 1237, 1397, 1936, 2053, 2219, 3293, 4295 |
| BmeT110I | CYCGRG | 1 cut(s) | 2756 |
| BmgBI | CACGTC | 2 cut(s) | 268, 2593 |
| BmiI | GGNNCC | 5 cut(s) | 289, 1238, 1867, 2547, 4329 |
| BmrFI | CCNGG | 6 cut(s) | 479, 963, 2550, 2679, 3718, 3747 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2928 |
| BpiI | GAAGAC | 5 cut(s) | 1134, 1971, 2957, 3245, 4029 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1459, 1491 |
| Bpu10I | CCTNAGC | 2 cut(s) | 543, 4332 |
| Bpu14I | TTCGAA | 1 cut(s) | 3256 |
| BpuEI | CTTGAG | 4 cut(s) | 1371, 2375, 3179, 3247 |
| BpuMI | CCSGG | 2 cut(s) | 2679, 3718 |
| BsaAI | YACGTR | 1 cut(s) | 2642 |
| BsaBI | GATNNNNATC | 2 cut(s) | 348, 1926 |
| BsaHI | GRCGYC | 1 cut(s) | 2819 |
| BsaI | GGTCTC | 3 cut(s) | 599, 1426, 2177 |
| BsaJI | CCNNGG | 4 cut(s) | 1210, 2056, 3717, 4105 |
| BsaWI | WCCGGW | 3 cut(s) | 3457, 3760, 3892 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 647, 677 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 1216, 1367, 2578, 4111 |
| Bse118I | RCCGGY | 2 cut(s) | 3169, 3892 |
| Bse1I | ACTGG | 8 cut(s) | 361, 816, 988, 998, 1973, 3354, 3636, 3883 |
| Bse21I | CCTNAGG | 2 cut(s) | 2541, 3086 |
| Bse3DI | GCAATG | 2 cut(s) | 762, 1795 |
| Bse8I | GATNNNNATC | 2 cut(s) | 348, 1926 |
| BseAI | TCCGGA | 2 cut(s) | 3457, 3760 |
| BseBI | CCWGG | 4 cut(s) | 479, 963, 2550, 3747 |
| BseDI | CCNNGG | 4 cut(s) | 1210, 2056, 3717, 4105 |
| BseGI | GGATG | 7 cut(s) | 76, 1572, 1665, 1858, 2587, 3029, 3811 |
| BseJI | GATNNNNATC | 2 cut(s) | 348, 1926 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 1216, 1367, 2578, 4111 |
| BseMI | GCAATG | 2 cut(s) | 762, 1795 |
| BseMII | CTCAG | 9 cut(s) | 462, 534, 928, 2030, 2588, 2941, 3481, 4215, 4346 |
| BseNI | ACTGG | 8 cut(s) | 361, 816, 988, 998, 1973, 3354, 3636, 3883 |
| BseRI | GAGGAG | 3 cut(s) | 1368, 4302, 4305 |
| BseSI | GKGCMC | 1 cut(s) | 2742 |
| BseYI | CCCAGC | 1 cut(s) | 250 |
| BsgI | GTGCAG | 2 cut(s) | 1179, 4074 |
| BshFI | GGCC | 7 cut(s) | 927, 1209, 1371, 2514, 3183, 4104, 4266 |
| BshTI | ACCGGT | 1 cut(s) | 3892 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1539, 2742 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2756 |
| BsiSI | CCGG | 6 cut(s) | 2679, 3170, 3458, 3717, 3761, 3893 |
| BsiWI | CGTACG | 1 cut(s) | 1846 |
| BslFI | GGGAC | 1 cut(s) | 3734 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 1216, 1367, 2578, 4111 |
| BsmAI | GTCTC | 5 cut(s) | 599, 1386, 1426, 2177, 2276 |
| BsmBI | CGTCTC | 1 cut(s) | 1386 |
| BsmFI | GGGAC | 1 cut(s) | 3734 |
| BsmI | GAATGC | 1 cut(s) | 3659 |
| BsnI | GGCC | 7 cut(s) | 927, 1209, 1371, 2514, 3183, 4104, 4266 |
| Bso31I | GGTCTC | 3 cut(s) | 599, 1426, 2177 |
| BsoBI | CYCGRG | 1 cut(s) | 2756 |
| Bsp119I | TTCGAA | 1 cut(s) | 3256 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1539, 2742 |
| Bsp13I | TCCGGA | 2 cut(s) | 3457, 3760 |
| BspACI | CCGC | 3 cut(s) | 985, 2624, 3880 |
| BspANI | GGCC | 7 cut(s) | 927, 1209, 1371, 2514, 3183, 4104, 4266 |
| BspCNI | CTCAG | 9 cut(s) | 463, 535, 927, 2031, 2589, 2940, 3480, 4216, 4345 |
| BspEI | TCCGGA | 2 cut(s) | 3457, 3760 |
| BspHI | TCATGA | 2 cut(s) | 1858, 3775 |
| BspLI | GGNNCC | 5 cut(s) | 289, 1238, 1867, 2547, 4329 |
| BspMAI | CTGCAG | 1 cut(s) | 1561 |
| BspMI | ACCTGC | 1 cut(s) | 655 |
| BspPI | GGATC | 1 cut(s) | 2206 |
| BspQI | GCTCTTC | 2 cut(s) | 507, 2085 |
| BspT104I | TTCGAA | 1 cut(s) | 3256 |
| BspTNI | GGTCTC | 3 cut(s) | 599, 1426, 2177 |
| BsrDI | GCAATG | 2 cut(s) | 762, 1795 |
| BsrFI | RCCGGY | 2 cut(s) | 3169, 3892 |
| BsrI | ACTGG | 8 cut(s) | 361, 816, 988, 998, 1973, 3354, 3636, 3883 |
| BssAI | RCCGGY | 2 cut(s) | 3169, 3892 |
| BssECI | CCNNGG | 4 cut(s) | 1210, 2056, 3717, 4105 |
| BssNAI | GTATAC | 1 cut(s) | 3008 |
| BssNI | GRCGYC | 1 cut(s) | 2819 |
| BssSI | CACGAG | 1 cut(s) | 3944 |
| BssT1I | CCWWGG | 3 cut(s) | 1210, 2056, 4105 |
| Bst1107I | GTATAC | 1 cut(s) | 3008 |
| Bst2BI | CACGAG | 1 cut(s) | 3944 |
| Bst2UI | CCWGG | 4 cut(s) | 479, 963, 2550, 3747 |
| Bst4CI | ACNGT | 4 cut(s) | 557, 728, 2135, 2909 |
| Bst6I | CTCTTC | 4 cut(s) | 507, 854, 2085, 2209 |
| BstACI | GRCGYC | 1 cut(s) | 2819 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 910, 2497 |
| BstBAI | YACGTR | 1 cut(s) | 2642 |
| BstBI | TTCGAA | 1 cut(s) | 3256 |
| BstC8I | GCNNGC | 8 cut(s) | 522, 889, 968, 2467, 2555, 3240, 3244, 3482 |
| BstEII | GGTNACC | 2 cut(s) | 536, 3437 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2576 |
| BstF5I | GGATG | 7 cut(s) | 76, 1572, 1665, 1858, 2587, 3029, 3811 |
| BstHHI | GCGC | 3 cut(s) | 2559, 2862, 3608 |
| BstMAI | GTCTC | 5 cut(s) | 599, 1386, 1426, 2177, 2276 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 910, 967, 2497, 2554, 2627 |
| BstNI | CCWGG | 4 cut(s) | 479, 963, 2550, 3747 |
| BstNSI | RCATGY | 4 cut(s) | 771, 822, 2349, 3246 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2928 |
| BstPI | GGTNACC | 2 cut(s) | 536, 3437 |
| BstSCI | CCNGG | 6 cut(s) | 477, 961, 2548, 2677, 3716, 3745 |
| BstSFI | CTRYAG | 2 cut(s) | 1519, 1557 |
| BstSLI | GKGCMC | 1 cut(s) | 2742 |
| BstV2I | GAAGAC | 5 cut(s) | 1134, 1971, 2957, 3245, 4029 |
| BstX2I | RGATCY | 5 cut(s) | 467, 863, 2198, 2441, 2977 |
| BstYI | RGATCY | 5 cut(s) | 467, 863, 2198, 2441, 2977 |
| BstZ17I | GTATAC | 1 cut(s) | 3008 |
| Bsu36I | CCTNAGG | 2 cut(s) | 2541, 3086 |
| BsuRI | GGCC | 7 cut(s) | 927, 1209, 1371, 2514, 3183, 4104, 4266 |
| BtrI | CACGTC | 2 cut(s) | 268, 2593 |
| BtsCI | GGATG | 7 cut(s) | 76, 1572, 1665, 1858, 2587, 3029, 3811 |
| BtsI | GCAGTG | 1 cut(s) | 2476 |
| BtsIMutI | CAGTG | 2 cut(s) | 2476, 2971 |
| BveI | ACCTGC | 1 cut(s) | 655 |
| Cac8I | GCNNGC | 8 cut(s) | 522, 889, 968, 2467, 2555, 3240, 3244, 3482 |
| CaiI | CAGNNNCTG | 3 cut(s) | 811, 887, 2465 |
| CciI | TCATGA | 2 cut(s) | 1858, 3775 |
| CfoI | GCGC | 3 cut(s) | 2559, 2862, 3608 |
| Cfr10I | RCCGGY | 2 cut(s) | 3169, 3892 |
| CseI | GACGC | 1 cut(s) | 2808 |
| CspAI | ACCGGT | 1 cut(s) | 3892 |
| DraI | TTTAAA | 1 cut(s) | 3417 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 821 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 821 |
| Eam1104I | CTCTTC | 4 cut(s) | 507, 854, 2085, 2209 |
| EarI | CTCTTC | 4 cut(s) | 507, 854, 2085, 2209 |
| Ecl136II | GAGCTC | 1 cut(s) | 1537 |
| Eco130I | CCWWGG | 3 cut(s) | 1210, 2056, 4105 |
| Eco147I | AGGCCT | 2 cut(s) | 1371, 4266 |
| Eco24I | GRGCYC | 1 cut(s) | 1539 |
| Eco31I | GGTCTC | 3 cut(s) | 599, 1426, 2177 |
| Eco32I | GATATC | 1 cut(s) | 3303 |
| Eco47I | GGWCC | 8 cut(s) | 475, 1237, 1397, 1936, 2053, 2219, 3293, 4295 |
| Eco53kI | GAGCTC | 1 cut(s) | 1537 |
| Eco57I | CTGAAG | 6 cut(s) | 488, 511, 2066, 2947, 2969, 3668 |
| Eco81I | CCTNAGG | 2 cut(s) | 2541, 3086 |
| Eco88I | CYCGRG | 1 cut(s) | 2756 |
| Eco91I | GGTNACC | 2 cut(s) | 536, 3437 |
| EcoICRI | GAGCTC | 1 cut(s) | 1537 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2576 |
| EcoO109I | RGGNCCY | 2 cut(s) | 2219, 4295 |
| EcoO65I | GGTNACC | 2 cut(s) | 536, 3437 |
| EcoRI | GAATTC | 1 cut(s) | 1507 |
| EcoRII | CCWGG | 4 cut(s) | 477, 961, 2548, 3745 |
| EcoRV | GATATC | 1 cut(s) | 3303 |
| EcoT14I | CCWWGG | 3 cut(s) | 1210, 2056, 4105 |
| EcoT22I | ATGCAT | 3 cut(s) | 906, 2493, 3248 |
| EcoT38I | GRGCYC | 1 cut(s) | 1539 |
| ErhI | CCWWGG | 3 cut(s) | 1210, 2056, 4105 |
| Esp3I | CGTCTC | 1 cut(s) | 1386 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 737, 769, 2315, 2347 |
| FaqI | GGGAC | 1 cut(s) | 3734 |
| FbaI | TGATCA | 2 cut(s) | 1735, 3772 |
| FblI | GTMKAC | 1 cut(s) | 3007 |
| FokI | GGATG | 7 cut(s) | 83, 1579, 1672, 1865, 2594, 3016, 3798 |
| FriOI | GRGCYC | 1 cut(s) | 1539 |
| GlaI | GCGC | 3 cut(s) | 2558, 2861, 3607 |
| GsaI | CCCAGC | 1 cut(s) | 254 |
| HaeIII | GGCC | 7 cut(s) | 927, 1209, 1371, 2514, 3183, 4104, 4266 |
| HapII | CCGG | 6 cut(s) | 2679, 3170, 3458, 3717, 3761, 3893 |
| HgaI | GACGC | 1 cut(s) | 2808 |
| HhaI | GCGC | 3 cut(s) | 2559, 2862, 3608 |
| Hin1I | GRCGYC | 1 cut(s) | 2819 |
| Hin6I | GCGC | 3 cut(s) | 2557, 2860, 3606 |
| HinP1I | GCGC | 3 cut(s) | 2557, 2860, 3606 |
| HincII | GTYRAC | 2 cut(s) | 3473, 4168 |
| HindII | GTYRAC | 2 cut(s) | 3473, 4168 |
| HindIII | AAGCTT | 2 cut(s) | 3155, 3533 |
| HpaI | GTTAAC | 1 cut(s) | 4168 |
| HpaII | CCGG | 6 cut(s) | 2679, 3170, 3458, 3717, 3761, 3893 |
| HphI | GGTGA | 9 cut(s) | 428, 472, 698, 1103, 1408, 2006, 2903, 3646, 3998 |
| Hpy166II | GTNNAC | 8 cut(s) | 79, 1273, 2740, 3008, 3332, 3473, 3548, 4168 |
| Hpy8I | GTNNAC | 8 cut(s) | 79, 1273, 2740, 3008, 3332, 3473, 3548, 4168 |
| Hpy99I | CGWCG | 2 cut(s) | 1158, 4053 |
| HpyCH4III | ACNGT | 4 cut(s) | 557, 728, 2135, 2909 |
| HpyCH4IV | ACGT | 8 cut(s) | 267, 313, 1845, 1891, 2240, 2592, 2641, 4135 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 910, 967, 2497, 2554, 2627 |
| HpySE526I | ACGT | 8 cut(s) | 267, 313, 1845, 1891, 2240, 2592, 2641, 4135 |
| Hsp92I | GRCGYC | 1 cut(s) | 2819 |
| HspAI | GCGC | 3 cut(s) | 2557, 2860, 3606 |
| Kpn2I | TCCGGA | 2 cut(s) | 3457, 3760 |
| Ksp22I | TGATCA | 2 cut(s) | 1735, 3772 |
| KspAI | GTTAAC | 1 cut(s) | 4168 |
| LguI | GCTCTTC | 2 cut(s) | 507, 2085 |
| LmnI | GCTCC | 6 cut(s) | 287, 1534, 1865, 2545, 3380, 3796 |
| MaeII | ACGT | 8 cut(s) | 267, 313, 1845, 1891, 2240, 2592, 2641, 4135 |
| MflI | RGATCY | 5 cut(s) | 467, 863, 2198, 2441, 2977 |
| MhlI | GDGCHC | 2 cut(s) | 1539, 2742 |
| MlyI | GAGTC | 2 cut(s) | 2791, 3202 |
| MmeI | TCCRAC | 2 cut(s) | 345, 3016 |
| Mph1103I | ATGCAT | 3 cut(s) | 906, 2493, 3248 |
| MroI | TCCGGA | 2 cut(s) | 3457, 3760 |
| MroXI | GAANNNNTTC | 5 cut(s) | 501, 752, 936, 2079, 2523 |
| MslI | CAYNNNNRTG | 2 cut(s) | 3668, 4281 |
| MspA1I | CMGCKG | 2 cut(s) | 2624, 3013 |
| MspI | CCGG | 6 cut(s) | 2679, 3170, 3458, 3717, 3761, 3893 |
| MspR9I | CCNGG | 6 cut(s) | 479, 963, 2550, 2679, 3718, 3747 |
| Mva1269I | GAATGC | 1 cut(s) | 3659 |
| MvaI | CCWGG | 4 cut(s) | 479, 963, 2550, 3747 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 910, 967, 2497, 2554, 2627 |
| NciI | CCSGG | 2 cut(s) | 2679, 3718 |
| NlaIV | GGNNCC | 5 cut(s) | 289, 1238, 1867, 2547, 4329 |
| NmeAIII | GCCGAG | 2 cut(s) | 968, 2555 |
| NmuCI | GTSAC | 3 cut(s) | 1439, 1892, 2930 |
| NsiI | ATGCAT | 3 cut(s) | 906, 2493, 3248 |
| NspI | RCATGY | 4 cut(s) | 771, 822, 2349, 3246 |
| NspV | TTCGAA | 1 cut(s) | 3256 |
| PaeI | GCATGC | 1 cut(s) | 3246 |
| PaeR7I | CTCGAG | 1 cut(s) | 2756 |
| PagI | TCATGA | 2 cut(s) | 1858, 3775 |
| PceI | AGGCCT | 2 cut(s) | 1371, 4266 |
| PciI | ACATGT | 1 cut(s) | 818 |
| PciSI | GCTCTTC | 2 cut(s) | 507, 2085 |
| PctI | GAATGC | 1 cut(s) | 3659 |
| PdmI | GAANNNNTTC | 5 cut(s) | 501, 752, 936, 2079, 2523 |
| Pfl23II | CGTACG | 1 cut(s) | 1846 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1216, 4111 |
| PfoI | TCCNGGA | 2 cut(s) | 2677, 3745 |
| PinAI | ACCGGT | 1 cut(s) | 3892 |
| PleI | GAGTC | 2 cut(s) | 2790, 3201 |
| PpsI | GAGTC | 2 cut(s) | 2790, 3201 |
| Ppu21I | YACGTR | 1 cut(s) | 2642 |
| PpuMI | RGGWCCY | 2 cut(s) | 2219, 4295 |
| PscI | ACATGT | 1 cut(s) | 818 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2928 |
| PsiI | TTATAA | 1 cut(s) | 4323 |
| Psp124BI | GAGCTC | 1 cut(s) | 1539 |
| Psp5II | RGGWCCY | 2 cut(s) | 2219, 4295 |
| Psp6I | CCWGG | 4 cut(s) | 477, 961, 2548, 3745 |
| PspEI | GGTNACC | 2 cut(s) | 536, 3437 |
| PspFI | CCCAGC | 1 cut(s) | 250 |
| PspGI | CCWGG | 4 cut(s) | 477, 961, 2548, 3745 |
| PspLI | CGTACG | 1 cut(s) | 1846 |
| PspN4I | GGNNCC | 5 cut(s) | 289, 1238, 1867, 2547, 4329 |
| PspPPI | RGGWCCY | 2 cut(s) | 2219, 4295 |
| PspXI | VCTCGAGB | 1 cut(s) | 2756 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1839, 1871 |
| PstI | CTGCAG | 1 cut(s) | 1561 |
| PstNI | CAGNNNCTG | 3 cut(s) | 811, 887, 2465 |
| PsuI | RGATCY | 5 cut(s) | 467, 863, 2198, 2441, 2977 |
| PvuII | CAGCTG | 1 cut(s) | 3013 |
| RseI | CAYNNNNRTG | 2 cut(s) | 3668, 4281 |
| SacI | GAGCTC | 1 cut(s) | 1539 |
| SapI | GCTCTTC | 2 cut(s) | 507, 2085 |
| ScaI | AGTACT | 7 cut(s) | 135, 1728, 1949, 2388, 2637, 2840, 2850 |
| SchI | GAGTC | 2 cut(s) | 2791, 3202 |
| ScrFI | CCNGG | 6 cut(s) | 479, 963, 2550, 2679, 3718, 3747 |
| SduI | GDGCHC | 2 cut(s) | 1539, 2742 |
| SfcI | CTRYAG | 2 cut(s) | 1519, 1557 |
| Sfr274I | CTCGAG | 1 cut(s) | 2756 |
| SfuI | TTCGAA | 1 cut(s) | 3256 |
| SinI | GGWCC | 8 cut(s) | 475, 1237, 1397, 1936, 2053, 2219, 3293, 4295 |
| SlaI | CTCGAG | 1 cut(s) | 2756 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 3668, 4281 |
| SmlI | CTYRAG | 5 cut(s) | 1386, 2390, 2756, 3158, 3226 |
| SmoI | CTYRAG | 5 cut(s) | 1386, 2390, 2756, 3158, 3226 |
| SphI | GCATGC | 1 cut(s) | 3246 |
| SseBI | AGGCCT | 2 cut(s) | 1371, 4266 |
| SsiI | CCGC | 3 cut(s) | 985, 2624, 3880 |
| SstI | GAGCTC | 1 cut(s) | 1539 |
| StuI | AGGCCT | 2 cut(s) | 1371, 4266 |
| StyD4I | CCNGG | 6 cut(s) | 477, 961, 2548, 2677, 3716, 3745 |
| StyI | CCWWGG | 3 cut(s) | 1210, 2056, 4105 |
| TaaI | ACNGT | 4 cut(s) | 557, 728, 2135, 2909 |
| TaiI | ACGT | 8 cut(s) | 270, 316, 1848, 1894, 2243, 2595, 2644, 4138 |
| TaqI | TCGA | 7 cut(s) | 145, 2280, 2757, 2922, 3152, 3256, 3975 |
| TscAI | CASTG | 2 cut(s) | 2476, 2971 |
| TseFI | GTSAC | 3 cut(s) | 1439, 1892, 2930 |
| Tsp45I | GTSAC | 3 cut(s) | 1439, 1892, 2930 |
| TspGWI | ACGGA | 4 cut(s) | 1229, 1410, 2794, 3022 |
| TspRI | CASTG | 2 cut(s) | 2476, 2971 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1216, 4111 |
| VneI | GTGCAC | 1 cut(s) | 2738 |
| VpaK11BI | GGWCC | 8 cut(s) | 475, 1237, 1397, 1936, 2053, 2219, 3293, 4295 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2576 |
| XapI | RAATTY | 9 cut(s) | 696, 1187, 1311, 1507, 2274, 2704, 3756, 4082, 4206 |
| XbaI | TCTAGA | 3 cut(s) | 730, 2308, 2335 |
| XceI | RCATGY | 4 cut(s) | 771, 822, 2349, 3246 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1113, 4008 |
| XhoI | CTCGAG | 1 cut(s) | 2756 |
| XmiI | GTMKAC | 1 cut(s) | 3007 |
| XmnI | GAANNNNTTC | 5 cut(s) | 501, 752, 936, 2079, 2523 |
| ZrmI | AGTACT | 7 cut(s) | 135, 1728, 1949, 2388, 2637, 2840, 2850 |
| Zsp2I | ATGCAT | 3 cut(s) | 906, 2493, 3248 |