TMV resistance protein N-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 842 |
| AarI | CACCTGC | 1 cut(s) | 1218 |
| AatII | GACGTC | 2 cut(s) | 342, 1260 |
| Acc36I | ACCTGC | 2 cut(s) | 1218, 1416 |
| AccBSI | CCGCTC | 1 cut(s) | 398 |
| AccI | GTMKAC | 2 cut(s) | 478, 1335 |
| AciI | CCGC | 3 cut(s) | 343, 369, 398 |
| AclWI | GGATC | 2 cut(s) | 38, 518 |
| AcsI | RAATTY | 4 cut(s) | 181, 285, 422, 428 |
| AcuI | CTGAAG | 6 cut(s) | 752, 828, 1023, 1311, 1409, 1625 |
| AcyI | GRCGYC | 2 cut(s) | 339, 1257 |
| AfaI | GTAC | 4 cut(s) | 57, 879, 1074, 1773 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 548, 564, 1414 |
| AflIII | ACRYGT | 2 cut(s) | 1264, 1543 |
| AjiI | CACGTC | 2 cut(s) | 1339, 1345 |
| AjnI | CCWGG | 1 cut(s) | 1203 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 804, 836 |
| AluBI | AGCT | 9 cut(s) | 208, 772, 780, 869, 1083, 1507, 1521, 1609, 1687 |
| AluI | AGCT | 9 cut(s) | 208, 772, 780, 869, 1083, 1507, 1521, 1609, 1687 |
| Alw21I | GWGCWC | 1 cut(s) | 928 |
| Alw26I | GTCTC | 3 cut(s) | 1530, 1662, 1791 |
| Alw44I | GTGCAC | 1 cut(s) | 924 |
| AlwI | GGATC | 2 cut(s) | 38, 518 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 836 |
| Ama87I | CYCGRG | 1 cut(s) | 1646 |
| AoxI | GGCC | 1 cut(s) | 525 |
| ApaLI | GTGCAC | 1 cut(s) | 924 |
| ApeKI | GCWGC | 4 cut(s) | 22, 301, 1083, 1507 |
| ApoI | RAATTY | 4 cut(s) | 181, 285, 422, 428 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1859, 1891 |
| AseI | ATTAAT | 1 cut(s) | 1587 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 788, 816, 1016 |
| AsuC2I | CCSGG | 1 cut(s) | 1224 |
| AsuHPI | GGTGA | 1 cut(s) | 794 |
| AvaI | CYCGRG | 1 cut(s) | 1646 |
| AxyI | CCTNAGG | 1 cut(s) | 1413 |
| BaeGI | GKGCMC | 1 cut(s) | 928 |
| BauI | CACGAG | 1 cut(s) | 417 |
| BbsI | GAAGAC | 3 cut(s) | 851, 1159, 1260 |
| Bbv12I | GWGCWC | 1 cut(s) | 928 |
| BbvI | GCAGC | 4 cut(s) | 9, 313, 1070, 1494 |
| BccI | CCATC | 1 cut(s) | 1492 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1876, 1910 |
| BciT130I | CCWGG | 1 cut(s) | 1205 |
| BciVI | GTATCC | 1 cut(s) | 1476 |
| BcnI | CCSGG | 1 cut(s) | 1224 |
| BcoDI | GTCTC | 3 cut(s) | 1530, 1662, 1791 |
| BfaI | CTAG | 3 cut(s) | 278, 690, 1022 |
| BfuAI | ACCTGC | 2 cut(s) | 1218, 1416 |
| BfuI | GTATCC | 1 cut(s) | 1476 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1417 |
| BglII | AGATCT | 1 cut(s) | 1127 |
| BisI | GCNGC | 4 cut(s) | 23, 302, 1084, 1508 |
| BlsI | GCNGC | 4 cut(s) | 24, 303, 1085, 1509 |
| BmcAI | AGTACT | 2 cut(s) | 879, 1074 |
| Bme1390I | CCNGG | 2 cut(s) | 1205, 1224 |
| BmeT110I | CYCGRG | 1 cut(s) | 1646 |
| BmgBI | CACGTC | 2 cut(s) | 1339, 1345 |
| BmiI | GGNNCC | 2 cut(s) | 553, 1406 |
| BmrFI | CCNGG | 2 cut(s) | 1205, 1224 |
| BmrI | ACTGGG | 3 cut(s) | 890, 938, 947 |
| BmsI | GCATC | 1 cut(s) | 1152 |
| BmuI | ACTGGG | 3 cut(s) | 890, 938, 947 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1845 |
| BpiI | GAAGAC | 3 cut(s) | 851, 1159, 1260 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 398, 430, 400, 432, 1585, 1617 |
| BpuEI | CTTGAG | 1 cut(s) | 277 |
| BpuMI | CCSGG | 1 cut(s) | 1224 |
| BsaAI | YACGTR | 1 cut(s) | 1775 |
| BsaBI | GATNNNNATC | 1 cut(s) | 42 |
| BsaHI | GRCGYC | 2 cut(s) | 339, 1257 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 716, 746, 1323, 1353 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 548, 564, 1414 |
| Bse1I | ACTGG | 6 cut(s) | 305, 379, 885, 933, 942, 1288 |
| Bse21I | CCTNAGG | 1 cut(s) | 1413 |
| Bse3DI | GCAATG | 1 cut(s) | 1026 |
| Bse8I | GATNNNNATC | 1 cut(s) | 42 |
| BseBI | CCWGG | 1 cut(s) | 1205 |
| BseGI | GGATG | 3 cut(s) | 121, 340, 1167 |
| BseJI | GATNNNNATC | 1 cut(s) | 42 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 548, 564, 1414 |
| BseMI | GCAATG | 1 cut(s) | 1026 |
| BseMII | CTCAG | 5 cut(s) | 186, 1189, 1314, 1531, 1583 |
| BseNI | ACTGG | 6 cut(s) | 305, 379, 885, 933, 942, 1288 |
| BseSI | GKGCMC | 1 cut(s) | 928 |
| BseXI | GCAGC | 4 cut(s) | 9, 313, 1070, 1494 |
| BsgI | GTGCAG | 1 cut(s) | 1252 |
| BshFI | GGCC | 1 cut(s) | 527 |
| BsiHKAI | GWGCWC | 1 cut(s) | 928 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1646 |
| BsiSI | CCGG | 1 cut(s) | 1223 |
| BslFI | GGGAC | 1 cut(s) | 385 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 548, 564, 1414 |
| BsmAI | GTCTC | 3 cut(s) | 1530, 1662, 1791 |
| BsmFI | GGGAC | 1 cut(s) | 385 |
| BsmI | GAATGC | 1 cut(s) | 788 |
| BsnI | GGCC | 1 cut(s) | 527 |
| BsoBI | CYCGRG | 1 cut(s) | 1646 |
| Bsp1286I | GDGCHC | 1 cut(s) | 928 |
| Bsp143I | GATC | 6 cut(s) | 43, 510, 904, 991, 1057, 1127 |
| BspACI | CCGC | 3 cut(s) | 343, 369, 398 |
| BspANI | GGCC | 1 cut(s) | 527 |
| BspCNI | CTCAG | 5 cut(s) | 185, 1188, 1315, 1530, 1584 |
| BspHI | TCATGA | 3 cut(s) | 97, 544, 754 |
| BspLI | GGNNCC | 2 cut(s) | 553, 1406 |
| BspMI | ACCTGC | 2 cut(s) | 1218, 1416 |
| BspPI | GGATC | 2 cut(s) | 38, 518 |
| BsrBI | CCGCTC | 1 cut(s) | 398 |
| BsrDI | GCAATG | 1 cut(s) | 1026 |
| BsrI | ACTGG | 6 cut(s) | 305, 379, 885, 933, 942, 1288 |
| BssMI | GATC | 6 cut(s) | 43, 510, 904, 991, 1057, 1127 |
| BssNI | GRCGYC | 2 cut(s) | 339, 1257 |
| BssSI | CACGAG | 1 cut(s) | 417 |
| Bst2BI | CACGAG | 1 cut(s) | 417 |
| Bst2UI | CCWGG | 1 cut(s) | 1205 |
| Bst4CI | ACNGT | 3 cut(s) | 19, 923, 1532 |
| Bst6I | CTCTTC | 4 cut(s) | 771, 895, 937, 999 |
| BstACI | GRCGYC | 2 cut(s) | 339, 1257 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1171 |
| BstBAI | YACGTR | 1 cut(s) | 1775 |
| BstC8I | GCNNGC | 1 cut(s) | 1765 |
| BstDEI | CTNAG | 7 cut(s) | 172, 1175, 1323, 1413, 1517, 1592, 1941 |
| BstEII | GGTNACC | 1 cut(s) | 800 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 546, 1412 |
| BstF5I | GGATG | 3 cut(s) | 121, 340, 1167 |
| BstKTI | GATC | 6 cut(s) | 46, 513, 907, 994, 1060, 1130 |
| BstMAI | GTCTC | 3 cut(s) | 1530, 1662, 1791 |
| BstMBI | GATC | 6 cut(s) | 43, 510, 904, 991, 1057, 1127 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 1171, 1417 |
| BstNI | CCWGG | 1 cut(s) | 1205 |
| BstNSI | RCATGY | 3 cut(s) | 1035, 1268, 1547 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1845 |
| BstPI | GGTNACC | 1 cut(s) | 800 |
| BstSCI | CCNGG | 2 cut(s) | 1203, 1222 |
| BstSLI | GKGCMC | 1 cut(s) | 928 |
| BstV1I | GCAGC | 4 cut(s) | 9, 313, 1070, 1494 |
| BstV2I | GAAGAC | 3 cut(s) | 851, 1159, 1260 |
| BstX2I | RGATCY | 2 cut(s) | 510, 1127 |
| BstYI | RGATCY | 2 cut(s) | 510, 1127 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1413 |
| BsuI | GTATCC | 1 cut(s) | 1476 |
| BsuRI | GGCC | 1 cut(s) | 527 |
| BtrI | CACGTC | 2 cut(s) | 1339, 1345 |
| BtsCI | GGATG | 3 cut(s) | 121, 340, 1167 |
| BtsI | GCAGTG | 1 cut(s) | 1774 |
| BtsIMutI | CAGTG | 3 cut(s) | 926, 928, 1774 |
| BveI | ACCTGC | 2 cut(s) | 1218, 1416 |
| Cac8I | GCNNGC | 1 cut(s) | 1765 |
| CaiI | CAGNNNCTG | 1 cut(s) | 836 |
| CciI | TCATGA | 3 cut(s) | 97, 544, 754 |
| Csp6I | GTAC | 4 cut(s) | 56, 878, 1073, 1772 |
| CviQI | GTAC | 4 cut(s) | 56, 878, 1073, 1772 |
| DdeI | CTNAG | 7 cut(s) | 172, 1175, 1323, 1413, 1517, 1592, 1941 |
| DpnI | GATC | 6 cut(s) | 45, 512, 906, 993, 1059, 1129 |
| DpnII | GATC | 6 cut(s) | 43, 510, 904, 991, 1057, 1127 |
| Eam1104I | CTCTTC | 4 cut(s) | 771, 895, 937, 999 |
| EarI | CTCTTC | 4 cut(s) | 771, 895, 937, 999 |
| Eco57I | CTGAAG | 6 cut(s) | 752, 828, 1023, 1311, 1409, 1625 |
| Eco81I | CCTNAGG | 1 cut(s) | 1413 |
| Eco88I | CYCGRG | 1 cut(s) | 1646 |
| Eco91I | GGTNACC | 1 cut(s) | 800 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 546, 1412 |
| EcoO65I | GGTNACC | 1 cut(s) | 800 |
| EcoRI | GAATTC | 1 cut(s) | 181 |
| EcoRII | CCWGG | 1 cut(s) | 1203 |
| EcoT22I | ATGCAT | 1 cut(s) | 1167 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 804, 836 |
| FaqI | GGGAC | 1 cut(s) | 385 |
| FauI | CCCGC | 1 cut(s) | 362 |
| FblI | GTMKAC | 2 cut(s) | 478, 1335 |
| Fnu4HI | GCNGC | 4 cut(s) | 23, 302, 1084, 1508 |
| FokI | GGATG | 3 cut(s) | 128, 347, 1174 |
| Fsp4HI | GCNGC | 4 cut(s) | 23, 302, 1084, 1508 |
| FspBI | CTAG | 3 cut(s) | 278, 690, 1022 |
| GluI | GCNGC | 4 cut(s) | 23, 302, 1084, 1508 |
| HaeIII | GGCC | 1 cut(s) | 527 |
| HapII | CCGG | 1 cut(s) | 1223 |
| Hin1I | GRCGYC | 2 cut(s) | 339, 1257 |
| HincII | GTYRAC | 2 cut(s) | 1615, 1825 |
| HindII | GTYRAC | 2 cut(s) | 1615, 1825 |
| HindIII | AAGCTT | 1 cut(s) | 1607 |
| HpaI | GTTAAC | 1 cut(s) | 1825 |
| HpaII | CCGG | 1 cut(s) | 1223 |
| HphI | GGTGA | 1 cut(s) | 794 |
| Hpy188I | TCNGA | 9 cut(s) | 284, 538, 832, 1003, 1178, 1353, 1593, 1605, 1836 |
| HpyAV | CCTTC | 8 cut(s) | 129, 449, 517, 542, 723, 730, 1295, 1658 |
| HpyCH4III | ACNGT | 3 cut(s) | 19, 923, 1532 |
| HpyCH4IV | ACGT | 5 cut(s) | 339, 1257, 1338, 1344, 1774 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 1171, 1417 |
| HpyF3I | CTNAG | 7 cut(s) | 172, 1175, 1323, 1413, 1517, 1592, 1941 |
| HpySE526I | ACGT | 5 cut(s) | 339, 1257, 1338, 1344, 1774 |
| Hsp92I | GRCGYC | 2 cut(s) | 339, 1257 |
| KspAI | GTTAAC | 1 cut(s) | 1825 |
| Kzo9I | GATC | 6 cut(s) | 43, 510, 904, 991, 1057, 1127 |
| LmnI | GCTCC | 1 cut(s) | 551 |
| Lsp1109I | GCAGC | 4 cut(s) | 9, 313, 1070, 1494 |
| LweI | GCATC | 1 cut(s) | 1152 |
| MaeI | CTAG | 3 cut(s) | 278, 690, 1022 |
| MaeII | ACGT | 5 cut(s) | 339, 1257, 1338, 1344, 1774 |
| MaeIII | GTNAC | 9 cut(s) | 578, 800, 950, 983, 1063, 1187, 1345, 1595, 1875 |
| MalI | GATC | 6 cut(s) | 45, 512, 906, 993, 1059, 1129 |
| MbiI | CCGCTC | 1 cut(s) | 398 |
| MboI | GATC | 6 cut(s) | 43, 510, 904, 991, 1057, 1127 |
| MflI | RGATCY | 2 cut(s) | 510, 1127 |
| MhlI | GDGCHC | 1 cut(s) | 928 |
| MlyI | GAGTC | 4 cut(s) | 1310, 1334, 1342, 1603 |
| MmeI | TCCRAC | 1 cut(s) | 262 |
| MnlI | CCTC | 6 cut(s) | 58, 552, 561, 791, 1127, 1509 |
| Mph1103I | ATGCAT | 1 cut(s) | 1167 |
| MroXI | GAANNNNTTC | 3 cut(s) | 788, 816, 1016 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1310 |
| MspA1I | CMGCKG | 1 cut(s) | 1083 |
| MspI | CCGG | 1 cut(s) | 1223 |
| MspR9I | CCNGG | 2 cut(s) | 1205, 1224 |
| Mva1269I | GAATGC | 1 cut(s) | 788 |
| MvaI | CCWGG | 1 cut(s) | 1205 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 1171, 1417 |
| NciI | CCSGG | 1 cut(s) | 1224 |
| NdeII | GATC | 6 cut(s) | 43, 510, 904, 991, 1057, 1127 |
| NlaIV | GGNNCC | 2 cut(s) | 553, 1406 |
| NmuCI | GTSAC | 6 cut(s) | 578, 800, 1187, 1345, 1595, 1875 |
| NsiI | ATGCAT | 1 cut(s) | 1167 |
| NspI | RCATGY | 3 cut(s) | 1035, 1268, 1547 |
| PaeR7I | CTCGAG | 1 cut(s) | 1646 |
| PagI | TCATGA | 3 cut(s) | 97, 544, 754 |
| PaqCI | CACCTGC | 1 cut(s) | 1218 |
| PciI | ACATGT | 2 cut(s) | 1264, 1543 |
| PctI | GAATGC | 1 cut(s) | 788 |
| PdmI | GAANNNNTTC | 3 cut(s) | 788, 816, 1016 |
| PfeI | GAWTC | 9 cut(s) | 200, 411, 761, 833, 998, 1208, 1447, 1651, 1747 |
| PkrI | GCNGC | 4 cut(s) | 24, 303, 1085, 1509 |
| PleI | GAGTC | 4 cut(s) | 1310, 1333, 1342, 1602 |
| PpsI | GAGTC | 4 cut(s) | 1310, 1333, 1342, 1602 |
| Ppu21I | YACGTR | 1 cut(s) | 1775 |
| PscI | ACATGT | 2 cut(s) | 1264, 1543 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1845 |
| PshBI | ATTAAT | 1 cut(s) | 1587 |
| PsiI | TTATAA | 1 cut(s) | 842 |
| Psp6I | CCWGG | 1 cut(s) | 1203 |
| PspEI | GGTNACC | 1 cut(s) | 800 |
| PspGI | CCWGG | 1 cut(s) | 1203 |
| PspN4I | GGNNCC | 2 cut(s) | 553, 1406 |
| PstNI | CAGNNNCTG | 1 cut(s) | 836 |
| PsuI | RGATCY | 2 cut(s) | 510, 1127 |
| PvuII | CAGCTG | 1 cut(s) | 1083 |
| RsaI | GTAC | 4 cut(s) | 57, 879, 1074, 1773 |
| RsaNI | GTAC | 4 cut(s) | 56, 878, 1073, 1772 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1310 |
| SatI | GCNGC | 4 cut(s) | 23, 302, 1084, 1508 |
| Sau3AI | GATC | 6 cut(s) | 43, 510, 904, 991, 1057, 1127 |
| ScaI | AGTACT | 2 cut(s) | 879, 1074 |
| SchI | GAGTC | 4 cut(s) | 1310, 1334, 1342, 1603 |
| ScrFI | CCNGG | 2 cut(s) | 1205, 1224 |
| SduI | GDGCHC | 1 cut(s) | 928 |
| SfaNI | GCATC | 1 cut(s) | 1152 |
| Sfr274I | CTCGAG | 1 cut(s) | 1646 |
| SlaI | CTCGAG | 1 cut(s) | 1646 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1310 |
| SmlI | CTYRAG | 2 cut(s) | 292, 1646 |
| SmoI | CTYRAG | 2 cut(s) | 292, 1646 |
| SsiI | CCGC | 3 cut(s) | 343, 369, 398 |
| SspI | AATATT | 2 cut(s) | 635, 1017 |
| SspMI | CTAG | 3 cut(s) | 278, 690, 1022 |
| StyD4I | CCNGG | 2 cut(s) | 1203, 1222 |
| TaaI | ACNGT | 3 cut(s) | 19, 923, 1532 |
| TaiI | ACGT | 5 cut(s) | 342, 1260, 1341, 1347, 1777 |
| TaqI | TCGA | 4 cut(s) | 741, 1060, 1512, 1647 |
| TatI | WGTACW | 2 cut(s) | 877, 1072 |
| TfiI | GAWTC | 9 cut(s) | 200, 411, 761, 833, 998, 1208, 1447, 1651, 1747 |
| TscAI | CASTG | 3 cut(s) | 928, 933, 1774 |
| TseFI | GTSAC | 6 cut(s) | 578, 800, 1187, 1345, 1595, 1875 |
| TseI | GCWGC | 4 cut(s) | 22, 301, 1083, 1507 |
| Tsp45I | GTSAC | 6 cut(s) | 578, 800, 1187, 1345, 1595, 1875 |
| TspDTI | ATGAA | 5 cut(s) | 17, 114, 213, 337, 561 |
| TspGWI | ACGGA | 4 cut(s) | 580, 1059, 1136, 1459 |
| TspRI | CASTG | 3 cut(s) | 928, 933, 1774 |
| VneI | GTGCAC | 1 cut(s) | 924 |
| VspI | ATTAAT | 1 cut(s) | 1587 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 546, 1412 |
| XapI | RAATTY | 4 cut(s) | 181, 285, 422, 428 |
| XceI | RCATGY | 3 cut(s) | 1035, 1268, 1547 |
| XhoI | CTCGAG | 1 cut(s) | 1646 |
| XmiI | GTMKAC | 2 cut(s) | 478, 1335 |
| XmnI | GAANNNNTTC | 3 cut(s) | 788, 816, 1016 |
| XspI | CTAG | 3 cut(s) | 278, 690, 1022 |
| ZraI | GACGTC | 2 cut(s) | 340, 1258 |
| ZrmI | AGTACT | 2 cut(s) | 879, 1074 |
| Zsp2I | ATGCAT | 1 cut(s) | 1167 |