TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 18 - 198 | 1.2e-55 | TIR domain |
| TIR_2 | PF13676 | 21 - 117 | 3.8e-16 | TIR domain |
| NB-ARC | PF00931 | 202 - 370 | 1.1e-20 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 438 - 509 | 3e-15 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 725 - 825 | 4.1e-07 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 767 - 934 | 1.4e-10 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 861 - 929 | 1.1e-07 | Leucine-rich repeat region |
| C-JID | PF20160 | 1006 - 1150 | 4.4e-07 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 3368 |
| Acc65I | GGTACC | 1 cut(s) | 3136 |
| AccB1I | GGYRCC | 2 cut(s) | 3136, 3545 |
| AccI | GTMKAC | 1 cut(s) | 1389 |
| AccIII | TCCGGA | 1 cut(s) | 190 |
| AciI | CCGC | 3 cut(s) | 91, 1351, 3579 |
| AclWI | GGATC | 3 cut(s) | 146, 933, 3176 |
| AcuI | CTGAAG | 9 cut(s) | 58, 402, 1307, 1712, 2422, 2492, 2609, 2981, 3186 |
| AdeI | CACNNNGTG | 1 cut(s) | 267 |
| AfaI | GTAC | 8 cut(s) | 840, 1984, 2191, 2292, 2842, 2923, 3089, 3138 |
| AfeI | AGCGCT | 1 cut(s) | 2435 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 21, 22, 2080, 3089 |
| AflIII | ACRYGT | 1 cut(s) | 60 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 3151 |
| AhlI | ACTAGT | 1 cut(s) | 706 |
| AjiI | CACGTC | 2 cut(s) | 61, 3584 |
| AjnI | CCWGG | 4 cut(s) | 218, 1537, 1798, 3016 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 238, 270, 393, 425, 1223, 1255 |
| AleI | CACNNNNGTG | 1 cut(s) | 723 |
| Alw21I | GWGCWC | 6 cut(s) | 14, 198, 720, 3130, 3430, 3441 |
| Alw44I | GTGCAC | 1 cut(s) | 3426 |
| AlwI | GGATC | 3 cut(s) | 146, 933, 3176 |
| Ama87I | CYCGRG | 2 cut(s) | 3315, 3375 |
| Aor13HI | TCCGGA | 1 cut(s) | 190 |
| Aor51HI | AGCGCT | 1 cut(s) | 2435 |
| AoxI | GGCC | 2 cut(s) | 24, 1729 |
| ApaLI | GTGCAC | 1 cut(s) | 3426 |
| ApeKI | GCWGC | 6 cut(s) | 372, 1696, 2121, 2328, 2488, 3483 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2019, 2051 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1512 |
| Asp718I | GGTACC | 1 cut(s) | 3136 |
| AspLEI | GCGC | 1 cut(s) | 2436 |
| AspS9I | GGNCC | 3 cut(s) | 24, 1730, 1929 |
| AsuC2I | CCSGG | 1 cut(s) | 152 |
| AsuHPI | GGTGA | 5 cut(s) | 1847, 2552, 3118, 3266, 3418 |
| AvaI | CYCGRG | 2 cut(s) | 3315, 3375 |
| AvaII | GGWCC | 1 cut(s) | 1929 |
| BaeGI | GKGCMC | 1 cut(s) | 3430 |
| BanI | GGYRCC | 2 cut(s) | 3136, 3545 |
| BanII | GRGCYC | 2 cut(s) | 198, 3424 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 822, 854, 1685, 1717 |
| BauI | CACGAG | 3 cut(s) | 2868, 3423, 3564 |
| BbsI | GAAGAC | 4 cut(s) | 90, 1163, 3174, 3223 |
| Bbv12I | GWGCWC | 6 cut(s) | 14, 198, 720, 3130, 3430, 3441 |
| BbvCI | CCTCAGC | 1 cut(s) | 1459 |
| BbvI | GCAGC | 6 cut(s) | 384, 1683, 2108, 2315, 2475, 3495 |
| BccI | CCATC | 6 cut(s) | 191, 236, 667, 1295, 1309, 3557 |
| BceAI | ACGGC | 1 cut(s) | 331 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2859, 2893 |
| BciT130I | CCWGG | 4 cut(s) | 220, 1539, 1800, 3018 |
| BciVI | GTATCC | 1 cut(s) | 1788 |
| BclI | TGATCA | 2 cut(s) | 727, 3456 |
| BcnI | CCSGG | 1 cut(s) | 152 |
| BcuI | ACTAGT | 1 cut(s) | 706 |
| BfaI | CTAG | 7 cut(s) | 465, 702, 707, 788, 908, 1002, 2283 |
| BfmI | CTRYAG | 2 cut(s) | 3193, 3612 |
| BfoI | RGCGCY | 1 cut(s) | 2437 |
| BfuI | GTATCC | 1 cut(s) | 1788 |
| BisI | GCNGC | 6 cut(s) | 373, 1697, 2122, 2329, 2489, 3484 |
| BlpI | GCTNAGC | 1 cut(s) | 603 |
| BlsI | GCNGC | 6 cut(s) | 374, 1698, 2123, 2330, 2490, 3485 |
| Bme1390I | CCNGG | 5 cut(s) | 152, 220, 1539, 1800, 3018 |
| Bme18I | GGWCC | 1 cut(s) | 1929 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 3151 |
| BmeT110I | CYCGRG | 2 cut(s) | 3315, 3375 |
| BmgBI | CACGTC | 2 cut(s) | 61, 3584 |
| BmgT120I | GGNCC | 3 cut(s) | 24, 1730, 1929 |
| BmiI | GGNNCC | 7 cut(s) | 345, 574, 1732, 1931, 2783, 3138, 3547 |
| BmrFI | CCNGG | 5 cut(s) | 152, 220, 1539, 1800, 3018 |
| BmrI | ACTGGG | 1 cut(s) | 3291 |
| BmsI | GCATC | 8 cut(s) | 436, 491, 559, 589, 753, 2916, 3386, 3559 |
| BmuI | ACTGGG | 1 cut(s) | 3291 |
| BpiI | GAAGAC | 4 cut(s) | 90, 1163, 3174, 3223 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 185, 217 |
| BpmI | CTGGAG | 3 cut(s) | 1064, 1185, 3347 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1177, 1459 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 603 |
| BpuEI | CTTGAG | 9 cut(s) | 629, 1774, 1979, 2006, 2186, 2317, 2938, 2993, 3126 |
| BpuMI | CCSGG | 1 cut(s) | 152 |
| Bsa29I | ATCGAT | 2 cut(s) | 1851, 1899 |
| BsaBI | GATNNNNATC | 3 cut(s) | 924, 1659, 2208 |
| BsaJI | CCNNGG | 4 cut(s) | 47, 781, 948, 3314 |
| BsaWI | WCCGGW | 2 cut(s) | 190, 1810 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 3051, 3081 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 21, 22, 2080, 3089 |
| Bse1I | ACTGG | 4 cut(s) | 37, 945, 3138, 3297 |
| Bse3DI | GCAATG | 4 cut(s) | 1338, 2010, 2015, 2217 |
| Bse8I | GATNNNNATC | 3 cut(s) | 924, 1659, 2208 |
| BseAI | TCCGGA | 1 cut(s) | 190 |
| BseBI | CCWGG | 4 cut(s) | 220, 1539, 1800, 3018 |
| BseCI | ATCGAT | 2 cut(s) | 1851, 1899 |
| BseDI | CCNNGG | 4 cut(s) | 47, 781, 948, 3314 |
| BseGI | GGATG | 8 cut(s) | 604, 678, 856, 1508, 1819, 2006, 2209, 3098 |
| BseJI | GATNNNNATC | 3 cut(s) | 924, 1659, 2208 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 21, 22, 2080, 3089 |
| BseMI | GCAATG | 4 cut(s) | 1338, 2010, 2015, 2217 |
| BseMII | CTCAG | 9 cut(s) | 216, 570, 1425, 1473, 1820, 2330, 2612, 2650, 3063 |
| BseNI | ACTGG | 4 cut(s) | 37, 945, 3138, 3297 |
| BseRI | GAGGAG | 2 cut(s) | 188, 2468 |
| BseSI | GKGCMC | 1 cut(s) | 3430 |
| BseXI | GCAGC | 6 cut(s) | 384, 1683, 2108, 2315, 2475, 3495 |
| BseYI | CCCAGC | 1 cut(s) | 477 |
| BsgI | GTGCAG | 1 cut(s) | 2899 |
| BshFI | GGCC | 2 cut(s) | 26, 1731 |
| BshNI | GGYRCC | 2 cut(s) | 3136, 3545 |
| BshVI | ATCGAT | 2 cut(s) | 1851, 1899 |
| BsiHKAI | GWGCWC | 6 cut(s) | 14, 198, 720, 3130, 3430, 3441 |
| BsiHKCI | CYCGRG | 2 cut(s) | 3315, 3375 |
| BsiSI | CCGG | 3 cut(s) | 151, 191, 1811 |
| BslFI | GGGAC | 3 cut(s) | 167, 328, 2413 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 21, 22, 2080, 3089 |
| BsmBI | CGTCTC | 1 cut(s) | 354 |
| BsmFI | GGGAC | 3 cut(s) | 167, 328, 2413 |
| BsmI | GAATGC | 2 cut(s) | 302, 2730 |
| BsnI | GGCC | 2 cut(s) | 26, 1731 |
| BsoBI | CYCGRG | 2 cut(s) | 3315, 3375 |
| Bsp1286I | GDGCHC | 7 cut(s) | 14, 198, 720, 3130, 3424, 3430, 3441 |
| Bsp13I | TCCGGA | 1 cut(s) | 190 |
| Bsp1407I | TGTACA | 2 cut(s) | 838, 2189 |
| Bsp143I | GATC | 8 cut(s) | 138, 727, 925, 1852, 1900, 3181, 3271, 3456 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 603 |
| Bsp19I | CCATGG | 1 cut(s) | 47 |
| BspACI | CCGC | 3 cut(s) | 91, 1351, 3579 |
| BspANI | GGCC | 2 cut(s) | 26, 1731 |
| BspCNI | CTCAG | 9 cut(s) | 215, 571, 1426, 1472, 1821, 2331, 2613, 2649, 3064 |
| BspDI | ATCGAT | 2 cut(s) | 1851, 1899 |
| BspEI | TCCGGA | 1 cut(s) | 190 |
| BspLI | GGNNCC | 7 cut(s) | 345, 574, 1732, 1931, 2783, 3138, 3547 |
| BspMAI | CTGCAG | 1 cut(s) | 3616 |
| BspPI | GGATC | 3 cut(s) | 146, 933, 3176 |
| BspQI | GCTCTTC | 2 cut(s) | 1527, 3444 |
| BspT107I | GGYRCC | 2 cut(s) | 3136, 3545 |
| BsrDI | GCAATG | 4 cut(s) | 1338, 2010, 2015, 2217 |
| BsrGI | TGTACA | 2 cut(s) | 838, 2189 |
| BsrI | ACTGG | 4 cut(s) | 37, 945, 3138, 3297 |
| BssECI | CCNNGG | 4 cut(s) | 47, 781, 948, 3314 |
| BssMI | GATC | 8 cut(s) | 138, 727, 925, 1852, 1900, 3181, 3271, 3456 |
| BssNAI | GTATAC | 1 cut(s) | 1390 |
| BssSI | CACGAG | 3 cut(s) | 2868, 3423, 3564 |
| BssT1I | CCWWGG | 2 cut(s) | 47, 948 |
| Bst1107I | GTATAC | 1 cut(s) | 1390 |
| Bst2BI | CACGAG | 3 cut(s) | 2868, 3423, 3564 |
| Bst2UI | CCWGG | 4 cut(s) | 220, 1539, 1800, 3018 |
| Bst6I | CTCTTC | 6 cut(s) | 300, 396, 1527, 1641, 1797, 3444 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2913 |
| BstAUI | TGTACA | 2 cut(s) | 838, 2189 |
| BstC8I | GCNNGC | 5 cut(s) | 272, 475, 531, 1355, 2728 |
| BstDSI | CCRYGG | 2 cut(s) | 47, 781 |
| BstF5I | GGATG | 8 cut(s) | 604, 678, 856, 1508, 1819, 2006, 2209, 3098 |
| BstH2I | RGCGCY | 1 cut(s) | 2437 |
| BstHHI | GCGC | 1 cut(s) | 2436 |
| BstKTI | GATC | 8 cut(s) | 141, 730, 928, 1855, 1903, 3184, 3274, 3459 |
| BstMBI | GATC | 8 cut(s) | 138, 727, 925, 1852, 1900, 3181, 3271, 3456 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 78, 470, 479, 2746, 2800, 2913, 3125 |
| BstNI | CCWGG | 4 cut(s) | 220, 1539, 1800, 3018 |
| BstNSI | RCATGY | 2 cut(s) | 1226, 1347 |
| BstSCI | CCNGG | 5 cut(s) | 150, 218, 1537, 1798, 3016 |
| BstSFI | CTRYAG | 2 cut(s) | 3193, 3612 |
| BstSLI | GKGCMC | 1 cut(s) | 3430 |
| BstV1I | GCAGC | 6 cut(s) | 384, 1683, 2108, 2315, 2475, 3495 |
| BstV2I | GAAGAC | 4 cut(s) | 90, 1163, 3174, 3223 |
| BstX2I | RGATCY | 1 cut(s) | 3181 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1227 |
| BstYI | RGATCY | 1 cut(s) | 3181 |
| BstZ17I | GTATAC | 1 cut(s) | 1390 |
| Bsu15I | ATCGAT | 2 cut(s) | 1851, 1899 |
| BsuI | GTATCC | 1 cut(s) | 1788 |
| BsuRI | GGCC | 2 cut(s) | 26, 1731 |
| BsuTUI | ATCGAT | 2 cut(s) | 1851, 1899 |
| BtgI | CCRYGG | 2 cut(s) | 47, 781 |
| BtrI | CACGTC | 2 cut(s) | 61, 3584 |
| BtsCI | GGATG | 8 cut(s) | 604, 678, 856, 1508, 1819, 2006, 2209, 3098 |
| BtsI | GCAGTG | 1 cut(s) | 134 |
| BtsIMutI | CAGTG | 8 cut(s) | 30, 134, 533, 2446, 2644, 2669, 3366, 3428 |
| Cac8I | GCNNGC | 5 cut(s) | 272, 475, 531, 1355, 2728 |
| CfoI | GCGC | 1 cut(s) | 2436 |
| Cfr13I | GGNCC | 3 cut(s) | 24, 1730, 1929 |
| ClaI | ATCGAT | 2 cut(s) | 1851, 1899 |
| CseI | GACGC | 1 cut(s) | 1554 |
| CsiI | ACCWGGT | 1 cut(s) | 1798 |
| Csp6I | GTAC | 8 cut(s) | 839, 1983, 2190, 2291, 2841, 2922, 3088, 3137 |
| CspCI | CAANNNNNGTGG | 6 cut(s) | 518, 553, 2133, 2168, 2856, 2891 |
| CviQI | GTAC | 8 cut(s) | 839, 1983, 2190, 2291, 2841, 2922, 3088, 3137 |
| DpnI | GATC | 8 cut(s) | 140, 729, 927, 1854, 1902, 3183, 3273, 3458 |
| DpnII | GATC | 8 cut(s) | 138, 727, 925, 1852, 1900, 3181, 3271, 3456 |
| DraI | TTTAAA | 2 cut(s) | 1716, 2247 |
| DraIII | CACNNNGTG | 1 cut(s) | 267 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 3368 |
| DriI | GACNNNNNGTC | 1 cut(s) | 3151 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 3368 |
| Eam1104I | CTCTTC | 6 cut(s) | 300, 396, 1527, 1641, 1797, 3444 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 3151 |
| EarI | CTCTTC | 6 cut(s) | 300, 396, 1527, 1641, 1797, 3444 |
| Ecl136II | GAGCTC | 1 cut(s) | 196 |
| Eco130I | CCWWGG | 2 cut(s) | 47, 948 |
| Eco24I | GRGCYC | 2 cut(s) | 198, 3424 |
| Eco47I | GGWCC | 1 cut(s) | 1929 |
| Eco47III | AGCGCT | 1 cut(s) | 2435 |
| Eco53kI | GAGCTC | 1 cut(s) | 196 |
| Eco57I | CTGAAG | 9 cut(s) | 58, 402, 1307, 1712, 2422, 2492, 2609, 2981, 3186 |
| Eco88I | CYCGRG | 2 cut(s) | 3315, 3375 |
| EcoICRI | GAGCTC | 1 cut(s) | 196 |
| EcoO109I | RGGNCCY | 2 cut(s) | 24, 1929 |
| EcoRI | GAATTC | 2 cut(s) | 1231, 1947 |
| EcoRII | CCWGG | 4 cut(s) | 218, 1537, 1798, 3016 |
| EcoT14I | CCWWGG | 2 cut(s) | 47, 948 |
| EcoT22I | ATGCAT | 4 cut(s) | 302, 1228, 1482, 3401 |
| EcoT38I | GRGCYC | 2 cut(s) | 198, 3424 |
| ErhI | CCWWGG | 2 cut(s) | 47, 948 |
| Esp3I | CGTCTC | 1 cut(s) | 354 |
| FaqI | GGGAC | 3 cut(s) | 167, 328, 2413 |
| FauI | CCCGC | 1 cut(s) | 98 |
| FauNDI | CATATG | 3 cut(s) | 1045, 2754, 3532 |
| FbaI | TGATCA | 2 cut(s) | 727, 3456 |
| FblI | GTMKAC | 1 cut(s) | 1389 |
| Fnu4HI | GCNGC | 6 cut(s) | 373, 1697, 2122, 2329, 2489, 3484 |
| FokI | GGATG | 8 cut(s) | 611, 685, 863, 1515, 1826, 1993, 2196, 3105 |
| FriOI | GRGCYC | 2 cut(s) | 198, 3424 |
| Fsp4HI | GCNGC | 6 cut(s) | 373, 1697, 2122, 2329, 2489, 3484 |
| FspBI | CTAG | 7 cut(s) | 465, 702, 707, 788, 908, 1002, 2283 |
| GlaI | GCGC | 1 cut(s) | 2435 |
| GluI | GCNGC | 6 cut(s) | 373, 1697, 2122, 2329, 2489, 3484 |
| GsaI | CCCAGC | 1 cut(s) | 481 |
| GsuI | CTGGAG | 3 cut(s) | 1064, 1185, 3347 |
| HaeII | RGCGCY | 1 cut(s) | 2437 |
| HaeIII | GGCC | 2 cut(s) | 26, 1731 |
| HapII | CCGG | 3 cut(s) | 151, 191, 1811 |
| HgaI | GACGC | 1 cut(s) | 1554 |
| HhaI | GCGC | 1 cut(s) | 2436 |
| Hin6I | GCGC | 1 cut(s) | 2434 |
| HinP1I | GCGC | 1 cut(s) | 2434 |
| HindIII | AAGCTT | 5 cut(s) | 407, 605, 1718, 2384, 2747 |
| HpaII | CCGG | 3 cut(s) | 151, 191, 1811 |
| HphI | GGTGA | 5 cut(s) | 1847, 2552, 3118, 3266, 3418 |
| Hpy166II | GTNNAC | 8 cut(s) | 1220, 1390, 1544, 1688, 2669, 2895, 3042, 3428 |
| Hpy8I | GTNNAC | 8 cut(s) | 1220, 1390, 1544, 1688, 2669, 2895, 3042, 3428 |
| Hpy99I | CGWCG | 2 cut(s) | 62, 236 |
| HpyCH4IV | ACGT | 4 cut(s) | 60, 2763, 3322, 3583 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 78, 470, 479, 2746, 2800, 2913, 3125 |
| HpySE526I | ACGT | 4 cut(s) | 60, 2763, 3322, 3583 |
| HspAI | GCGC | 1 cut(s) | 2434 |
| Kpn2I | TCCGGA | 1 cut(s) | 190 |
| KpnI | GGTACC | 1 cut(s) | 3140 |
| Ksp22I | TGATCA | 2 cut(s) | 727, 3456 |
| Kzo9I | GATC | 8 cut(s) | 138, 727, 925, 1852, 1900, 3181, 3271, 3456 |
| LguI | GCTCTTC | 2 cut(s) | 1527, 3444 |
| LmnI | GCTCC | 6 cut(s) | 193, 201, 343, 540, 2455, 2787 |
| Lsp1109I | GCAGC | 6 cut(s) | 384, 1683, 2108, 2315, 2475, 3495 |
| LweI | GCATC | 8 cut(s) | 436, 491, 559, 589, 753, 2916, 3386, 3559 |
| MabI | ACCWGGT | 1 cut(s) | 1798 |
| MaeI | CTAG | 7 cut(s) | 465, 702, 707, 788, 908, 1002, 2283 |
| MaeII | ACGT | 4 cut(s) | 60, 2763, 3322, 3583 |
| MaeIII | GTNAC | 6 cut(s) | 1021, 1907, 2476, 2624, 2824, 3067 |
| MalI | GATC | 8 cut(s) | 140, 729, 927, 1854, 1902, 3183, 3273, 3458 |
| MboI | GATC | 8 cut(s) | 138, 727, 925, 1852, 1900, 3181, 3271, 3456 |
| MfeI | CAATTG | 5 cut(s) | 1631, 2427, 2789, 2836, 2911 |
| MflI | RGATCY | 1 cut(s) | 3181 |
| MhlI | GDGCHC | 7 cut(s) | 14, 198, 720, 3130, 3424, 3430, 3441 |
| MlyI | GAGTC | 5 cut(s) | 2022, 2077, 2229, 2284, 3056 |
| MmeI | TCCRAC | 3 cut(s) | 571, 1073, 2809 |
| Mph1103I | ATGCAT | 4 cut(s) | 302, 1228, 1482, 3401 |
| MroI | TCCGGA | 1 cut(s) | 190 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1512 |
| MslI | CAYNNNNRTG | 4 cut(s) | 723, 1225, 3225, 3404 |
| MspI | CCGG | 3 cut(s) | 151, 191, 1811 |
| MspR9I | CCNGG | 5 cut(s) | 152, 220, 1539, 1800, 3018 |
| MunI | CAATTG | 5 cut(s) | 1631, 2427, 2789, 2836, 2911 |
| Mva1269I | GAATGC | 2 cut(s) | 302, 2730 |
| MvaI | CCWGG | 4 cut(s) | 220, 1539, 1800, 3018 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 78, 470, 479, 2746, 2800, 2913, 3125 |
| NciI | CCSGG | 1 cut(s) | 152 |
| NcoI | CCATGG | 1 cut(s) | 47 |
| NdeI | CATATG | 3 cut(s) | 1045, 2754, 3532 |
| NdeII | GATC | 8 cut(s) | 138, 727, 925, 1852, 1900, 3181, 3271, 3456 |
| NlaIV | GGNNCC | 7 cut(s) | 345, 574, 1732, 1931, 2783, 3138, 3547 |
| NmuCI | GTSAC | 3 cut(s) | 1021, 1907, 2624 |
| NsiI | ATGCAT | 4 cut(s) | 302, 1228, 1482, 3401 |
| NspI | RCATGY | 2 cut(s) | 1226, 1347 |
| OliI | CACNNNNGTG | 1 cut(s) | 723 |
| PciSI | GCTCTTC | 2 cut(s) | 1527, 3444 |
| PctI | GAATGC | 2 cut(s) | 302, 2730 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1512 |
| PflFI | GACNNNGTC | 1 cut(s) | 1548 |
| PfoI | TCCNGGA | 2 cut(s) | 150, 3016 |
| PkrI | GCNGC | 6 cut(s) | 374, 1698, 2123, 2330, 2490, 3485 |
| PleI | GAGTC | 5 cut(s) | 2022, 2076, 2229, 2283, 3056 |
| PpsI | GAGTC | 5 cut(s) | 2022, 2076, 2229, 2283, 3056 |
| PpuMI | RGGWCCY | 1 cut(s) | 1929 |
| Psp124BI | GAGCTC | 1 cut(s) | 198 |
| Psp5II | RGGWCCY | 1 cut(s) | 1929 |
| Psp6I | CCWGG | 4 cut(s) | 218, 1537, 1798, 3016 |
| PspFI | CCCAGC | 1 cut(s) | 477 |
| PspGI | CCWGG | 4 cut(s) | 218, 1537, 1798, 3016 |
| PspN4I | GGNNCC | 7 cut(s) | 345, 574, 1732, 1931, 2783, 3138, 3547 |
| PspPI | GGNCC | 3 cut(s) | 24, 1730, 1929 |
| PspPPI | RGGWCCY | 1 cut(s) | 1929 |
| PstI | CTGCAG | 1 cut(s) | 3616 |
| PsuI | RGATCY | 1 cut(s) | 3181 |
| PsyI | GACNNNGTC | 1 cut(s) | 1548 |
| RsaI | GTAC | 8 cut(s) | 840, 1984, 2191, 2292, 2842, 2923, 3089, 3138 |
| RsaNI | GTAC | 8 cut(s) | 839, 1983, 2190, 2291, 2841, 2922, 3088, 3137 |
| RseI | CAYNNNNRTG | 4 cut(s) | 723, 1225, 3225, 3404 |
| SacI | GAGCTC | 1 cut(s) | 198 |
| SapI | GCTCTTC | 2 cut(s) | 1527, 3444 |
| SatI | GCNGC | 6 cut(s) | 373, 1697, 2122, 2329, 2489, 3484 |
| Sau3AI | GATC | 8 cut(s) | 138, 727, 925, 1852, 1900, 3181, 3271, 3456 |
| Sau96I | GGNCC | 3 cut(s) | 24, 1730, 1929 |
| SchI | GAGTC | 5 cut(s) | 2022, 2077, 2229, 2284, 3056 |
| ScrFI | CCNGG | 5 cut(s) | 152, 220, 1539, 1800, 3018 |
| SduI | GDGCHC | 7 cut(s) | 14, 198, 720, 3130, 3424, 3430, 3441 |
| SexAI | ACCWGGT | 1 cut(s) | 1798 |
| SfaNI | GCATC | 8 cut(s) | 436, 491, 559, 589, 753, 2916, 3386, 3559 |
| SfcI | CTRYAG | 2 cut(s) | 3193, 3612 |
| SinI | GGWCC | 1 cut(s) | 1929 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 723, 1225, 3225, 3404 |
| SmlI | CTYRAG | 9 cut(s) | 608, 1753, 1958, 2021, 2165, 2332, 2917, 2972, 3141 |
| SmoI | CTYRAG | 9 cut(s) | 608, 1753, 1958, 2021, 2165, 2332, 2917, 2972, 3141 |
| SpeI | ACTAGT | 1 cut(s) | 706 |
| SsiI | CCGC | 3 cut(s) | 91, 1351, 3579 |
| SspI | AATATT | 2 cut(s) | 2856, 3605 |
| SspMI | CTAG | 7 cut(s) | 465, 702, 707, 788, 908, 1002, 2283 |
| SstI | GAGCTC | 1 cut(s) | 198 |
| StyD4I | CCNGG | 5 cut(s) | 150, 218, 1537, 1798, 3016 |
| StyI | CCWWGG | 2 cut(s) | 47, 948 |
| TaiI | ACGT | 4 cut(s) | 63, 2766, 3325, 3586 |
| TaqI | TCGA | 5 cut(s) | 210, 390, 1009, 1851, 1899 |
| TatI | WGTACW | 4 cut(s) | 838, 2189, 2290, 2840 |
| TscAI | CASTG | 8 cut(s) | 37, 134, 540, 2446, 2644, 2676, 3373, 3435 |
| TseFI | GTSAC | 3 cut(s) | 1021, 1907, 2624 |
| TseI | GCWGC | 6 cut(s) | 372, 1696, 2121, 2328, 2488, 3483 |
| Tsp45I | GTSAC | 3 cut(s) | 1021, 1907, 2624 |
| TspGWI | ACGGA | 4 cut(s) | 1267, 2993, 3105, 3141 |
| TspRI | CASTG | 8 cut(s) | 37, 134, 540, 2446, 2644, 2676, 3373, 3435 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1548 |
| VneI | GTGCAC | 1 cut(s) | 3426 |
| VpaK11BI | GGWCC | 1 cut(s) | 1929 |
| XceI | RCATGY | 2 cut(s) | 1226, 1347 |
| XmiI | GTMKAC | 1 cut(s) | 1389 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1512 |
| XspI | CTAG | 7 cut(s) | 465, 702, 707, 788, 908, 1002, 2283 |
| Zsp2I | ATGCAT | 4 cut(s) | 302, 1228, 1482, 3401 |