TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| C-JID | PF20160 | 19 - 170 | 1.6e-12 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 53 |
| Acc36I | ACCTGC | 1 cut(s) | 263 |
| AccII | CGCG | 2 cut(s) | 39, 372 |
| AccIII | TCCGGA | 1 cut(s) | 342 |
| AclWI | GGATC | 1 cut(s) | 164 |
| AcsI | RAATTY | 1 cut(s) | 69 |
| AdeI | CACNNNGTG | 1 cut(s) | 508 |
| AfaI | GTAC | 4 cut(s) | 123, 180, 247, 262 |
| AflIII | ACRYGT | 2 cut(s) | 236, 322 |
| AgsI | TTSAA | 3 cut(s) | 85, 383, 436 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 193 |
| AjiI | CACGTC | 1 cut(s) | 508 |
| AjnI | CCWGG | 2 cut(s) | 58, 349 |
| AluBI | AGCT | 3 cut(s) | 43, 449, 517 |
| AluI | AGCT | 3 cut(s) | 43, 449, 517 |
| Alw21I | GWGCWC | 2 cut(s) | 45, 172 |
| AlwI | GGATC | 1 cut(s) | 164 |
| Aor13HI | TCCGGA | 1 cut(s) | 342 |
| AoxI | GGCC | 1 cut(s) | 483 |
| ApaI | GGGCCC | 1 cut(s) | 487 |
| ApeKI | GCWGC | 3 cut(s) | 546, 549, 617 |
| ApoI | RAATTY | 1 cut(s) | 69 |
| AspS9I | GGNCC | 3 cut(s) | 335, 483, 484 |
| AsuC2I | CCSGG | 1 cut(s) | 333 |
| AsuHPI | GGTGA | 1 cut(s) | 302 |
| AvaII | GGWCC | 1 cut(s) | 335 |
| BaeGI | GKGCMC | 1 cut(s) | 487 |
| BanII | GRGCYC | 2 cut(s) | 45, 487 |
| Bbv12I | GWGCWC | 2 cut(s) | 45, 172 |
| BbvI | GCAGC | 3 cut(s) | 558, 561, 629 |
| BceAI | ACGGC | 1 cut(s) | 185 |
| BciT130I | CCWGG | 2 cut(s) | 60, 351 |
| BclI | TGATCA | 1 cut(s) | 519 |
| BcnI | CCSGG | 1 cut(s) | 333 |
| BfmI | CTRYAG | 1 cut(s) | 660 |
| BfuAI | ACCTGC | 1 cut(s) | 263 |
| BisI | GCNGC | 3 cut(s) | 547, 550, 618 |
| BlsI | GCNGC | 3 cut(s) | 548, 551, 619 |
| Bme1390I | CCNGG | 3 cut(s) | 60, 333, 351 |
| Bme18I | GGWCC | 1 cut(s) | 335 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 193 |
| BmgBI | CACGTC | 1 cut(s) | 508 |
| BmgT120I | GGNCC | 3 cut(s) | 335, 483, 484 |
| BmiI | GGNNCC | 4 cut(s) | 25, 347, 484, 485 |
| BmrFI | CCNGG | 3 cut(s) | 60, 333, 351 |
| BmsI | GCATC | 2 cut(s) | 121, 561 |
| BpmI | CTGGAG | 1 cut(s) | 29 |
| BpuMI | CCSGG | 1 cut(s) | 333 |
| Bsa29I | ATCGAT | 1 cut(s) | 441 |
| BsaBI | GATNNNNATC | 1 cut(s) | 155 |
| BsaJI | CCNNGG | 3 cut(s) | 125, 349, 350 |
| BsaWI | WCCGGW | 1 cut(s) | 342 |
| Bse1I | ACTGG | 3 cut(s) | 46, 253, 268 |
| Bse3DI | GCAATG | 1 cut(s) | 421 |
| Bse8I | GATNNNNATC | 1 cut(s) | 155 |
| BseAI | TCCGGA | 1 cut(s) | 342 |
| BseBI | CCWGG | 2 cut(s) | 60, 351 |
| BseCI | ATCGAT | 1 cut(s) | 441 |
| BseDI | CCNNGG | 3 cut(s) | 125, 349, 350 |
| BseGI | GGATG | 3 cut(s) | 136, 360, 583 |
| BseJI | GATNNNNATC | 1 cut(s) | 155 |
| BseMI | GCAATG | 1 cut(s) | 421 |
| BseMII | CTCAG | 2 cut(s) | 66, 105 |
| BseNI | ACTGG | 3 cut(s) | 46, 253, 268 |
| BseRI | GAGGAG | 1 cut(s) | 581 |
| BseSI | GKGCMC | 1 cut(s) | 487 |
| BseXI | GCAGC | 3 cut(s) | 558, 561, 629 |
| BsgI | GTGCAG | 1 cut(s) | 38 |
| Bsh1236I | CGCG | 2 cut(s) | 39, 372 |
| BshFI | GGCC | 1 cut(s) | 485 |
| BshVI | ATCGAT | 1 cut(s) | 441 |
| BsiHKAI | GWGCWC | 2 cut(s) | 45, 172 |
| BsiSI | CCGG | 2 cut(s) | 333, 343 |
| BsnI | GGCC | 1 cut(s) | 485 |
| Bsp120I | GGGCCC | 1 cut(s) | 483 |
| Bsp1286I | GDGCHC | 3 cut(s) | 45, 172, 487 |
| Bsp13I | TCCGGA | 1 cut(s) | 342 |
| Bsp143I | GATC | 4 cut(s) | 156, 307, 442, 519 |
| Bsp68I | TCGCGA | 1 cut(s) | 39 |
| BspANI | GGCC | 1 cut(s) | 485 |
| BspCNI | CTCAG | 2 cut(s) | 67, 106 |
| BspDI | ATCGAT | 1 cut(s) | 441 |
| BspEI | TCCGGA | 1 cut(s) | 342 |
| BspFNI | CGCG | 2 cut(s) | 39, 372 |
| BspLI | GGNNCC | 4 cut(s) | 25, 347, 484, 485 |
| BspMAI | CTGCAG | 1 cut(s) | 664 |
| BspMI | ACCTGC | 1 cut(s) | 263 |
| BspPI | GGATC | 1 cut(s) | 164 |
| BsrDI | GCAATG | 1 cut(s) | 421 |
| BsrI | ACTGG | 3 cut(s) | 46, 253, 268 |
| BssECI | CCNNGG | 3 cut(s) | 125, 349, 350 |
| BssMI | GATC | 4 cut(s) | 156, 307, 442, 519 |
| BssT1I | CCWWGG | 1 cut(s) | 125 |
| Bst2UI | CCWGG | 2 cut(s) | 60, 351 |
| Bst4CI | ACNGT | 1 cut(s) | 400 |
| BstC8I | GCNNGC | 2 cut(s) | 41, 464 |
| BstDEI | CTNAG | 2 cut(s) | 75, 114 |
| BstF5I | GGATG | 3 cut(s) | 136, 360, 583 |
| BstFNI | CGCG | 2 cut(s) | 39, 372 |
| BstKTI | GATC | 4 cut(s) | 159, 310, 445, 522 |
| BstMBI | GATC | 4 cut(s) | 156, 307, 442, 519 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 167 |
| BstNI | CCWGG | 2 cut(s) | 60, 351 |
| BstNSI | RCATGY | 3 cut(s) | 326, 414, 466 |
| BstSCI | CCNGG | 3 cut(s) | 58, 331, 349 |
| BstSFI | CTRYAG | 1 cut(s) | 660 |
| BstSLI | GKGCMC | 1 cut(s) | 487 |
| BstUI | CGCG | 2 cut(s) | 39, 372 |
| BstV1I | GCAGC | 3 cut(s) | 558, 561, 629 |
| Bsu15I | ATCGAT | 1 cut(s) | 441 |
| BsuRI | GGCC | 1 cut(s) | 485 |
| BsuTUI | ATCGAT | 1 cut(s) | 441 |
| BtgZI | GCGATG | 1 cut(s) | 387 |
| BtrI | CACGTC | 1 cut(s) | 508 |
| BtsCI | GGATG | 3 cut(s) | 136, 360, 583 |
| BtuMI | TCGCGA | 1 cut(s) | 39 |
| BveI | ACCTGC | 1 cut(s) | 263 |
| Cac8I | GCNNGC | 2 cut(s) | 41, 464 |
| Cfr13I | GGNCC | 3 cut(s) | 335, 483, 484 |
| ClaI | ATCGAT | 1 cut(s) | 441 |
| Csp6I | GTAC | 4 cut(s) | 122, 179, 246, 261 |
| CviAII | CATG | 3 cut(s) | 323, 411, 463 |
| CviJI | RGCY | 5 cut(s) | 43, 449, 485, 517, 572 |
| CviKI_1 | RGCY | 5 cut(s) | 43, 449, 485, 517, 572 |
| CviQI | GTAC | 4 cut(s) | 122, 179, 246, 261 |
| DdeI | CTNAG | 2 cut(s) | 75, 114 |
| DpnI | GATC | 4 cut(s) | 158, 309, 444, 521 |
| DpnII | GATC | 4 cut(s) | 156, 307, 442, 519 |
| DraIII | CACNNNGTG | 1 cut(s) | 508 |
| DriI | GACNNNNNGTC | 1 cut(s) | 193 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 193 |
| Ecl136II | GAGCTC | 1 cut(s) | 43 |
| Eco130I | CCWWGG | 1 cut(s) | 125 |
| Eco24I | GRGCYC | 2 cut(s) | 45, 487 |
| Eco47I | GGWCC | 1 cut(s) | 335 |
| Eco53kI | GAGCTC | 1 cut(s) | 43 |
| EcoICRI | GAGCTC | 1 cut(s) | 43 |
| EcoO109I | RGGNCCY | 1 cut(s) | 483 |
| EcoRII | CCWGG | 2 cut(s) | 58, 349 |
| EcoT14I | CCWWGG | 1 cut(s) | 125 |
| EcoT22I | ATGCAT | 2 cut(s) | 136, 464 |
| EcoT38I | GRGCYC | 2 cut(s) | 45, 487 |
| ErhI | CCWWGG | 1 cut(s) | 125 |
| FaeI | CATG | 3 cut(s) | 326, 414, 466 |
| FatI | CATG | 3 cut(s) | 322, 410, 462 |
| FauNDI | CATATG | 1 cut(s) | 12 |
| FbaI | TGATCA | 1 cut(s) | 519 |
| Fnu4HI | GCNGC | 3 cut(s) | 547, 550, 618 |
| FokI | GGATG | 3 cut(s) | 143, 367, 590 |
| FriOI | GRGCYC | 2 cut(s) | 45, 487 |
| Fsp4HI | GCNGC | 3 cut(s) | 547, 550, 618 |
| GluI | GCNGC | 3 cut(s) | 547, 550, 618 |
| GsuI | CTGGAG | 1 cut(s) | 29 |
| HaeIII | GGCC | 1 cut(s) | 485 |
| HapII | CCGG | 2 cut(s) | 333, 343 |
| Hin1II | CATG | 3 cut(s) | 326, 414, 466 |
| HpaII | CCGG | 2 cut(s) | 333, 343 |
| HphI | GGTGA | 1 cut(s) | 302 |
| Hpy166II | GTNNAC | 2 cut(s) | 364, 511 |
| Hpy188I | TCNGA | 2 cut(s) | 307, 643 |
| Hpy188III | TCNNGA | 5 cut(s) | 38, 74, 185, 206, 343 |
| Hpy8I | GTNNAC | 2 cut(s) | 364, 511 |
| Hpy99I | CGWCG | 2 cut(s) | 509, 650 |
| HpyAV | CCTTC | 1 cut(s) | 581 |
| HpyCH4III | ACNGT | 1 cut(s) | 400 |
| HpyCH4IV | ACGT | 2 cut(s) | 238, 507 |
| HpyCH4V | TGCA | 8 cut(s) | 19, 134, 414, 462, 466, 491, 605, 662 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 167 |
| HpyF3I | CTNAG | 2 cut(s) | 75, 114 |
| HpySE526I | ACGT | 2 cut(s) | 238, 507 |
| Hsp92II | CATG | 3 cut(s) | 326, 414, 466 |
| Kpn2I | TCCGGA | 1 cut(s) | 342 |
| Ksp22I | TGATCA | 1 cut(s) | 519 |
| Kzo9I | GATC | 4 cut(s) | 156, 307, 442, 519 |
| LmnI | GCTCC | 1 cut(s) | 48 |
| Lsp1109I | GCAGC | 3 cut(s) | 558, 561, 629 |
| LweI | GCATC | 2 cut(s) | 121, 561 |
| MaeII | ACGT | 2 cut(s) | 238, 507 |
| MaeIII | GTNAC | 1 cut(s) | 109 |
| MalI | GATC | 4 cut(s) | 158, 309, 444, 521 |
| MboI | GATC | 4 cut(s) | 156, 307, 442, 519 |
| MhlI | GDGCHC | 3 cut(s) | 45, 172, 487 |
| MluCI | AATT | 4 cut(s) | 54, 69, 174, 296 |
| MmeI | TCCRAC | 3 cut(s) | 79, 212, 382 |
| MnlI | CCTC | 7 cut(s) | 37, 370, 398, 412, 559, 562, 607 |
| Mph1103I | ATGCAT | 2 cut(s) | 136, 464 |
| MroI | TCCGGA | 1 cut(s) | 342 |
| MspI | CCGG | 2 cut(s) | 333, 343 |
| MspR9I | CCNGG | 3 cut(s) | 60, 333, 351 |
| MvaI | CCWGG | 2 cut(s) | 60, 351 |
| MvnI | CGCG | 2 cut(s) | 39, 372 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 167 |
| NciI | CCSGG | 1 cut(s) | 333 |
| NdeI | CATATG | 1 cut(s) | 12 |
| NdeII | GATC | 4 cut(s) | 156, 307, 442, 519 |
| NlaIII | CATG | 3 cut(s) | 326, 414, 466 |
| NlaIV | GGNNCC | 4 cut(s) | 25, 347, 484, 485 |
| NruI | TCGCGA | 1 cut(s) | 39 |
| NsiI | ATGCAT | 2 cut(s) | 136, 464 |
| NspI | RCATGY | 3 cut(s) | 326, 414, 466 |
| PaeI | GCATGC | 1 cut(s) | 466 |
| PasI | CCCWGGG | 1 cut(s) | 350 |
| PciI | ACATGT | 1 cut(s) | 322 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 235, 510 |
| PfoI | TCCNGGA | 1 cut(s) | 58 |
| PkrI | GCNGC | 3 cut(s) | 548, 551, 619 |
| PscI | ACATGT | 1 cut(s) | 322 |
| PsiI | TTATAA | 1 cut(s) | 53 |
| Psp124BI | GAGCTC | 1 cut(s) | 45 |
| Psp6I | CCWGG | 2 cut(s) | 58, 349 |
| PspGI | CCWGG | 2 cut(s) | 58, 349 |
| PspN4I | GGNNCC | 4 cut(s) | 25, 347, 484, 485 |
| PspOMI | GGGCCC | 1 cut(s) | 483 |
| PspPI | GGNCC | 3 cut(s) | 335, 483, 484 |
| PstI | CTGCAG | 1 cut(s) | 664 |
| RruI | TCGCGA | 1 cut(s) | 39 |
| RsaI | GTAC | 4 cut(s) | 123, 180, 247, 262 |
| RsaNI | GTAC | 4 cut(s) | 122, 179, 246, 261 |
| SacI | GAGCTC | 1 cut(s) | 45 |
| SatI | GCNGC | 3 cut(s) | 547, 550, 618 |
| Sau3AI | GATC | 4 cut(s) | 156, 307, 442, 519 |
| Sau96I | GGNCC | 3 cut(s) | 335, 483, 484 |
| ScrFI | CCNGG | 3 cut(s) | 60, 333, 351 |
| SduI | GDGCHC | 3 cut(s) | 45, 172, 487 |
| SfaNI | GCATC | 2 cut(s) | 121, 561 |
| SfcI | CTRYAG | 1 cut(s) | 660 |
| SinI | GGWCC | 1 cut(s) | 335 |
| SphI | GCATGC | 1 cut(s) | 466 |
| Sse9I | AATT | 4 cut(s) | 54, 69, 174, 296 |
| SstI | GAGCTC | 1 cut(s) | 45 |
| StyD4I | CCNGG | 3 cut(s) | 58, 331, 349 |
| StyI | CCWWGG | 1 cut(s) | 125 |
| TaaI | ACNGT | 1 cut(s) | 400 |
| TaiI | ACGT | 2 cut(s) | 241, 510 |
| TaqI | TCGA | 1 cut(s) | 441 |
| TasI | AATT | 4 cut(s) | 54, 69, 174, 296 |
| TatI | WGTACW | 1 cut(s) | 178 |
| TseI | GCWGC | 3 cut(s) | 546, 549, 617 |
| TspDTI | ATGAA | 3 cut(s) | 371, 545, 594 |
| TspGWI | ACGGA | 1 cut(s) | 183 |
| VpaK11BI | GGWCC | 1 cut(s) | 335 |
| XapI | RAATTY | 1 cut(s) | 69 |
| XceI | RCATGY | 3 cut(s) | 326, 414, 466 |
| Zsp2I | ATGCAT | 2 cut(s) | 136, 464 |