TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| C-JID | PF20160 | 80 - 126 | 2.6e-07 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 509 |
| AcsI | RAATTY | 2 cut(s) | 221, 252 |
| AcuI | CTGAAG | 2 cut(s) | 49, 110 |
| AfaI | GTAC | 2 cut(s) | 173, 462 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 405 |
| AgsI | TTSAA | 2 cut(s) | 268, 551 |
| AjnI | CCWGG | 1 cut(s) | 241 |
| AluBI | AGCT | 3 cut(s) | 205, 373, 458 |
| AluI | AGCT | 3 cut(s) | 205, 373, 458 |
| Alw21I | GWGCWC | 1 cut(s) | 207 |
| Alw26I | GTCTC | 1 cut(s) | 163 |
| ApoI | RAATTY | 2 cut(s) | 221, 252 |
| AspS9I | GGNCC | 1 cut(s) | 512 |
| AsuHPI | GGTGA | 1 cut(s) | 304 |
| AvaII | GGWCC | 1 cut(s) | 512 |
| BanII | GRGCYC | 1 cut(s) | 207 |
| Bbv12I | GWGCWC | 1 cut(s) | 207 |
| BccI | CCATC | 1 cut(s) | 328 |
| BciT130I | CCWGG | 1 cut(s) | 243 |
| BciVI | GTATCC | 1 cut(s) | 114 |
| BcoDI | GTCTC | 1 cut(s) | 163 |
| BfuI | GTATCC | 1 cut(s) | 114 |
| Bme1390I | CCNGG | 1 cut(s) | 243 |
| Bme18I | GGWCC | 1 cut(s) | 512 |
| BmgT120I | GGNCC | 1 cut(s) | 512 |
| BmiI | GGNNCC | 2 cut(s) | 513, 514 |
| BmrFI | CCNGG | 1 cut(s) | 243 |
| BmrI | ACTGGG | 1 cut(s) | 510 |
| BmuI | ACTGGG | 1 cut(s) | 510 |
| BsaWI | WCCGGW | 1 cut(s) | 378 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 276, 306 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 405 |
| Bse1I | ACTGG | 1 cut(s) | 516 |
| Bse3DI | GCAATG | 1 cut(s) | 97 |
| BseBI | CCWGG | 1 cut(s) | 243 |
| BseGI | GGATG | 2 cut(s) | 149, 339 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 405 |
| BseMI | GCAATG | 1 cut(s) | 97 |
| BseMII | CTCAG | 1 cut(s) | 249 |
| BseNI | ACTGG | 1 cut(s) | 516 |
| BsiHKAI | GWGCWC | 1 cut(s) | 207 |
| BsiSI | CCGG | 1 cut(s) | 379 |
| BslFI | GGGAC | 1 cut(s) | 525 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 405 |
| BsmAI | GTCTC | 1 cut(s) | 163 |
| BsmBI | CGTCTC | 1 cut(s) | 163 |
| BsmFI | GGGAC | 1 cut(s) | 525 |
| Bsp1286I | GDGCHC | 1 cut(s) | 207 |
| Bsp1407I | TGTACA | 2 cut(s) | 171, 460 |
| BspACI | CCGC | 1 cut(s) | 509 |
| BspCNI | CTCAG | 1 cut(s) | 250 |
| BspLI | GGNNCC | 2 cut(s) | 513, 514 |
| BsrDI | GCAATG | 1 cut(s) | 97 |
| BsrGI | TGTACA | 2 cut(s) | 171, 460 |
| BsrI | ACTGG | 1 cut(s) | 516 |
| Bst2UI | CCWGG | 1 cut(s) | 243 |
| Bst4CI | ACNGT | 1 cut(s) | 500 |
| Bst6I | CTCTTC | 1 cut(s) | 546 |
| BstAUI | TGTACA | 2 cut(s) | 171, 460 |
| BstC8I | GCNNGC | 1 cut(s) | 25 |
| BstDEI | CTNAG | 2 cut(s) | 163, 258 |
| BstF5I | GGATG | 2 cut(s) | 149, 339 |
| BstMAI | GTCTC | 1 cut(s) | 163 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 310 |
| BstNI | CCWGG | 1 cut(s) | 243 |
| BstNSI | RCATGY | 1 cut(s) | 23 |
| BstSCI | CCNGG | 1 cut(s) | 241 |
| BsuI | GTATCC | 1 cut(s) | 114 |
| BtsCI | GGATG | 2 cut(s) | 149, 339 |
| BtsIMutI | CAGTG | 1 cut(s) | 523 |
| Cac8I | GCNNGC | 1 cut(s) | 25 |
| Cfr13I | GGNCC | 1 cut(s) | 512 |
| Csp6I | GTAC | 2 cut(s) | 172, 461 |
| CviAII | CATG | 5 cut(s) | 20, 83, 97, 318, 488 |
| CviJI | RGCY | 4 cut(s) | 74, 205, 373, 458 |
| CviKI_1 | RGCY | 4 cut(s) | 74, 205, 373, 458 |
| CviQI | GTAC | 2 cut(s) | 172, 461 |
| DdeI | CTNAG | 2 cut(s) | 163, 258 |
| Eam1104I | CTCTTC | 1 cut(s) | 546 |
| EarI | CTCTTC | 1 cut(s) | 546 |
| Ecl136II | GAGCTC | 1 cut(s) | 205 |
| Eco24I | GRGCYC | 1 cut(s) | 207 |
| Eco47I | GGWCC | 1 cut(s) | 512 |
| Eco53kI | GAGCTC | 1 cut(s) | 205 |
| Eco57I | CTGAAG | 2 cut(s) | 49, 110 |
| EcoICRI | GAGCTC | 1 cut(s) | 205 |
| EcoO109I | RGGNCCY | 1 cut(s) | 512 |
| EcoRII | CCWGG | 1 cut(s) | 241 |
| EcoT22I | ATGCAT | 1 cut(s) | 281 |
| EcoT38I | GRGCYC | 1 cut(s) | 207 |
| Esp3I | CGTCTC | 1 cut(s) | 163 |
| FaeI | CATG | 5 cut(s) | 23, 86, 100, 321, 491 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 397, 429 |
| FaqI | GGGAC | 1 cut(s) | 525 |
| FatI | CATG | 5 cut(s) | 19, 82, 96, 317, 487 |
| FauI | CCCGC | 1 cut(s) | 502 |
| FokI | GGATG | 2 cut(s) | 136, 346 |
| FriOI | GRGCYC | 1 cut(s) | 207 |
| HapII | CCGG | 1 cut(s) | 379 |
| Hin1II | CATG | 5 cut(s) | 23, 86, 100, 321, 491 |
| HinfI | GANTC | 3 cut(s) | 120, 287, 449 |
| HpaII | CCGG | 1 cut(s) | 379 |
| HphI | GGTGA | 1 cut(s) | 304 |
| Hpy166II | GTNNAC | 2 cut(s) | 34, 172 |
| Hpy188III | TCNNGA | 1 cut(s) | 257 |
| Hpy8I | GTNNAC | 2 cut(s) | 34, 172 |
| HpyAV | CCTTC | 2 cut(s) | 134, 318 |
| HpyCH4III | ACNGT | 1 cut(s) | 500 |
| HpyCH4IV | ACGT | 1 cut(s) | 184 |
| HpyCH4V | TGCA | 5 cut(s) | 27, 90, 199, 279, 321 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 310 |
| HpyF3I | CTNAG | 2 cut(s) | 163, 258 |
| HpySE526I | ACGT | 1 cut(s) | 184 |
| Hsp92II | CATG | 5 cut(s) | 23, 86, 100, 321, 491 |
| KflI | GGGWCCC | 1 cut(s) | 512 |
| LmnI | GCTCC | 2 cut(s) | 9, 202 |
| LpnPI | CCDG | 8 cut(s) | 60, 113, 185, 228, 255, 270, 392, 529 |
| MaeII | ACGT | 1 cut(s) | 184 |
| MboII | GAAGA | 1 cut(s) | 376 |
| MfeI | CAATTG | 2 cut(s) | 58, 433 |
| MhlI | GDGCHC | 1 cut(s) | 207 |
| MluCI | AATT | 5 cut(s) | 58, 221, 237, 252, 433 |
| MmeI | TCCRAC | 1 cut(s) | 423 |
| MnlI | CCTC | 3 cut(s) | 415, 544, 547 |
| Mph1103I | ATGCAT | 1 cut(s) | 281 |
| MseI | TTAA | 1 cut(s) | 477 |
| MspI | CCGG | 1 cut(s) | 379 |
| MspR9I | CCNGG | 1 cut(s) | 243 |
| MunI | CAATTG | 2 cut(s) | 58, 433 |
| MvaI | CCWGG | 1 cut(s) | 243 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 310 |
| NlaIII | CATG | 5 cut(s) | 23, 86, 100, 321, 491 |
| NlaIV | GGNNCC | 2 cut(s) | 513, 514 |
| NsiI | ATGCAT | 1 cut(s) | 281 |
| NspI | RCATGY | 1 cut(s) | 23 |
| PfeI | GAWTC | 3 cut(s) | 120, 287, 449 |
| PfoI | TCCNGGA | 1 cut(s) | 241 |
| PpuMI | RGGWCCY | 1 cut(s) | 512 |
| Psp124BI | GAGCTC | 1 cut(s) | 207 |
| Psp5II | RGGWCCY | 1 cut(s) | 512 |
| Psp6I | CCWGG | 1 cut(s) | 241 |
| PspGI | CCWGG | 1 cut(s) | 241 |
| PspN4I | GGNNCC | 2 cut(s) | 513, 514 |
| PspPI | GGNCC | 1 cut(s) | 512 |
| PspPPI | RGGWCCY | 1 cut(s) | 512 |
| RsaI | GTAC | 2 cut(s) | 173, 462 |
| RsaNI | GTAC | 2 cut(s) | 172, 461 |
| SacI | GAGCTC | 1 cut(s) | 207 |
| SaqAI | TTAA | 1 cut(s) | 477 |
| Sau96I | GGNCC | 1 cut(s) | 512 |
| ScrFI | CCNGG | 1 cut(s) | 243 |
| SduI | GDGCHC | 1 cut(s) | 207 |
| SetI | ASST | 6 cut(s) | 132, 187, 207, 310, 375, 460 |
| SinI | GGWCC | 1 cut(s) | 512 |
| Sse9I | AATT | 5 cut(s) | 58, 221, 237, 252, 433 |
| SsiI | CCGC | 1 cut(s) | 509 |
| SspI | AATATT | 1 cut(s) | 395 |
| SstI | GAGCTC | 1 cut(s) | 207 |
| StyD4I | CCNGG | 1 cut(s) | 241 |
| TaaI | ACNGT | 1 cut(s) | 500 |
| TaiI | ACGT | 1 cut(s) | 187 |
| TasI | AATT | 5 cut(s) | 58, 221, 237, 252, 433 |
| TatI | WGTACW | 2 cut(s) | 171, 460 |
| TfiI | GAWTC | 3 cut(s) | 120, 287, 449 |
| Tru1I | TTAA | 1 cut(s) | 477 |
| Tru9I | TTAA | 1 cut(s) | 477 |
| TscAI | CASTG | 1 cut(s) | 523 |
| TspDTI | ATGAA | 4 cut(s) | 365, 401, 504, 519 |
| TspRI | CASTG | 1 cut(s) | 523 |
| VpaK11BI | GGWCC | 1 cut(s) | 512 |
| XapI | RAATTY | 2 cut(s) | 221, 252 |
| XceI | RCATGY | 1 cut(s) | 23 |
| Zsp2I | ATGCAT | 1 cut(s) | 281 |