TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| C-JID | PF20160 | 22 - 97 | 1.8e-09 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 3 cut(s) | 151, 185, 343 |
| AclWI | GGATC | 1 cut(s) | 297 |
| AcoI | YGGCCR | 1 cut(s) | 222 |
| AfaI | GTAC | 2 cut(s) | 71, 385 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 85, 86, 190, 387 |
| AgsI | TTSAA | 2 cut(s) | 209, 377 |
| AleI | CACNNNNGTG | 1 cut(s) | 81 |
| AluBI | AGCT | 1 cut(s) | 109 |
| AluI | AGCT | 1 cut(s) | 109 |
| AlwI | GGATC | 1 cut(s) | 297 |
| Ama87I | CYCGRG | 1 cut(s) | 281 |
| AoxI | GGCC | 1 cut(s) | 222 |
| ApeKI | GCWGC | 1 cut(s) | 109 |
| AspLEI | GCGC | 1 cut(s) | 204 |
| AsuC2I | CCSGG | 2 cut(s) | 117, 381 |
| AsuHPI | GGTGA | 1 cut(s) | 68 |
| AvaI | CYCGRG | 1 cut(s) | 281 |
| BbvI | GCAGC | 1 cut(s) | 96 |
| BccI | CCATC | 1 cut(s) | 385 |
| BceAI | ACGGC | 1 cut(s) | 237 |
| BcnI | CCSGG | 2 cut(s) | 117, 381 |
| BisI | GCNGC | 1 cut(s) | 110 |
| BlsI | GCNGC | 1 cut(s) | 111 |
| Bme1390I | CCNGG | 2 cut(s) | 117, 381 |
| BmeT110I | CYCGRG | 1 cut(s) | 281 |
| BmrFI | CCNGG | 2 cut(s) | 117, 381 |
| BmsI | GCATC | 1 cut(s) | 121 |
| BpuMI | CCSGG | 2 cut(s) | 117, 381 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 85, 86, 190, 387 |
| BseGI | GGATG | 2 cut(s) | 112, 396 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 85, 86, 190, 387 |
| BseRI | GAGGAG | 1 cut(s) | 161 |
| BseXI | GCAGC | 1 cut(s) | 96 |
| BshFI | GGCC | 1 cut(s) | 224 |
| BsiHKCI | CYCGRG | 1 cut(s) | 281 |
| BsiSI | CCGG | 2 cut(s) | 116, 381 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 85, 86, 190, 387 |
| BsmI | GAATGC | 1 cut(s) | 215 |
| BsnI | GGCC | 1 cut(s) | 224 |
| BsoBI | CYCGRG | 1 cut(s) | 281 |
| Bsp143I | GATC | 1 cut(s) | 289 |
| BspACI | CCGC | 3 cut(s) | 151, 185, 343 |
| BspANI | GGCC | 1 cut(s) | 224 |
| BspPI | GGATC | 1 cut(s) | 297 |
| BssMI | GATC | 1 cut(s) | 289 |
| Bst4CI | ACNGT | 2 cut(s) | 62, 103 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 210 |
| BstC8I | GCNNGC | 1 cut(s) | 151 |
| BstF5I | GGATG | 2 cut(s) | 112, 396 |
| BstHHI | GCGC | 1 cut(s) | 204 |
| BstKTI | GATC | 1 cut(s) | 292 |
| BstMBI | GATC | 1 cut(s) | 289 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 210 |
| BstSCI | CCNGG | 2 cut(s) | 115, 379 |
| BstV1I | GCAGC | 1 cut(s) | 96 |
| BsuRI | GGCC | 1 cut(s) | 224 |
| BtsCI | GGATG | 2 cut(s) | 112, 396 |
| Cac8I | GCNNGC | 1 cut(s) | 151 |
| CfoI | GCGC | 1 cut(s) | 204 |
| Csp6I | GTAC | 2 cut(s) | 70, 384 |
| CviAII | CATG | 2 cut(s) | 216, 335 |
| CviJI | RGCY | 3 cut(s) | 109, 224, 361 |
| CviKI_1 | RGCY | 3 cut(s) | 109, 224, 361 |
| CviQI | GTAC | 2 cut(s) | 70, 384 |
| DpnI | GATC | 1 cut(s) | 291 |
| DpnII | GATC | 1 cut(s) | 289 |
| EaeI | YGGCCR | 1 cut(s) | 222 |
| Eco32I | GATATC | 1 cut(s) | 349 |
| Eco88I | CYCGRG | 1 cut(s) | 281 |
| EcoRV | GATATC | 1 cut(s) | 349 |
| FaeI | CATG | 2 cut(s) | 219, 338 |
| FaiI | YATR | 6 cut(s) | 29, 140, 217, 254, 320, 336 |
| FatI | CATG | 2 cut(s) | 215, 334 |
| FauI | CCCGC | 3 cut(s) | 158, 192, 336 |
| Fnu4HI | GCNGC | 1 cut(s) | 110 |
| FokI | GGATG | 1 cut(s) | 99 |
| Fsp4HI | GCNGC | 1 cut(s) | 110 |
| GlaI | GCGC | 1 cut(s) | 203 |
| GluI | GCNGC | 1 cut(s) | 110 |
| HaeIII | GGCC | 1 cut(s) | 224 |
| HapII | CCGG | 2 cut(s) | 116, 381 |
| HhaI | GCGC | 1 cut(s) | 204 |
| Hin1II | CATG | 2 cut(s) | 219, 338 |
| Hin6I | GCGC | 1 cut(s) | 202 |
| HinP1I | GCGC | 1 cut(s) | 202 |
| HincII | GTYRAC | 1 cut(s) | 278 |
| HindII | GTYRAC | 1 cut(s) | 278 |
| HinfI | GANTC | 2 cut(s) | 144, 168 |
| HpaII | CCGG | 2 cut(s) | 116, 381 |
| HphI | GGTGA | 1 cut(s) | 68 |
| Hpy166II | GTNNAC | 1 cut(s) | 278 |
| Hpy8I | GTNNAC | 1 cut(s) | 278 |
| HpyAV | CCTTC | 1 cut(s) | 261 |
| HpyCH4III | ACNGT | 2 cut(s) | 62, 103 |
| HpyCH4V | TGCA | 1 cut(s) | 112 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 210 |
| Hsp92II | CATG | 2 cut(s) | 219, 338 |
| HspAI | GCGC | 1 cut(s) | 202 |
| Kzo9I | GATC | 1 cut(s) | 289 |
| LpnPI | CCDG | 2 cut(s) | 129, 394 |
| Lsp1109I | GCAGC | 1 cut(s) | 96 |
| LweI | GCATC | 1 cut(s) | 121 |
| MaeIII | GTNAC | 1 cut(s) | 128 |
| MalI | GATC | 1 cut(s) | 291 |
| MboI | GATC | 1 cut(s) | 289 |
| MlyI | GAGTC | 1 cut(s) | 162 |
| MmeI | TCCRAC | 1 cut(s) | 267 |
| MnlI | CCTC | 3 cut(s) | 79, 182, 252 |
| MseI | TTAA | 2 cut(s) | 57, 312 |
| MslI | CAYNNNNRTG | 1 cut(s) | 81 |
| MspA1I | CMGCKG | 1 cut(s) | 153 |
| MspI | CCGG | 2 cut(s) | 116, 381 |
| MspR9I | CCNGG | 2 cut(s) | 117, 381 |
| Mva1269I | GAATGC | 1 cut(s) | 215 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 210 |
| NciI | CCSGG | 2 cut(s) | 117, 381 |
| NdeII | GATC | 1 cut(s) | 289 |
| NlaIII | CATG | 2 cut(s) | 219, 338 |
| OliI | CACNNNNGTG | 1 cut(s) | 81 |
| PctI | GAATGC | 1 cut(s) | 215 |
| PfeI | GAWTC | 1 cut(s) | 144 |
| PkrI | GCNGC | 1 cut(s) | 111 |
| PleI | GAGTC | 1 cut(s) | 162 |
| PpsI | GAGTC | 1 cut(s) | 162 |
| RsaI | GTAC | 2 cut(s) | 71, 385 |
| RsaNI | GTAC | 2 cut(s) | 70, 384 |
| RseI | CAYNNNNRTG | 1 cut(s) | 81 |
| SaqAI | TTAA | 2 cut(s) | 57, 312 |
| SatI | GCNGC | 1 cut(s) | 110 |
| Sau3AI | GATC | 1 cut(s) | 289 |
| SchI | GAGTC | 1 cut(s) | 162 |
| ScrFI | CCNGG | 2 cut(s) | 117, 381 |
| SetI | ASST | 3 cut(s) | 57, 111, 272 |
| SfaNI | GCATC | 1 cut(s) | 121 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 81 |
| SsiI | CCGC | 3 cut(s) | 151, 185, 343 |
| StyD4I | CCNGG | 2 cut(s) | 115, 379 |
| TaaI | ACNGT | 2 cut(s) | 62, 103 |
| TaqI | TCGA | 1 cut(s) | 174 |
| TfiI | GAWTC | 1 cut(s) | 144 |
| Tru1I | TTAA | 2 cut(s) | 57, 312 |
| Tru9I | TTAA | 2 cut(s) | 57, 312 |
| TseI | GCWGC | 1 cut(s) | 109 |