TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| NB-ARC | PF00931 | 1 - 141 | 1e-16 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 210 - 278 | 7.5e-13 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 465 - 560 | 4.6e-06 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 471 - 557 | 8e-06 | Disease resistance protein RPS4B-like, leucine-rich repeats |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1466 |
| AciI | CCGC | 3 cut(s) | 367, 1709, 1793 |
| AclWI | GGATC | 4 cut(s) | 1227, 1312, 1575, 1744 |
| AcoI | YGGCCR | 2 cut(s) | 261, 1127 |
| AcsI | RAATTY | 7 cut(s) | 567, 1022, 1055, 1066, 1463, 1483, 1726 |
| AcuI | CTGAAG | 3 cut(s) | 1169, 1643, 1742 |
| AdeI | CACNNNGTG | 1 cut(s) | 336 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 30, 844, 1180, 1466, 1606 |
| AflIII | ACRYGT | 1 cut(s) | 151 |
| AhlI | ACTAGT | 3 cut(s) | 97, 361, 1559 |
| AjnI | CCWGG | 2 cut(s) | 850, 1504 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 533, 565, 626, 658, 1533, 1565 |
| AluBI | AGCT | 8 cut(s) | 394, 448, 491, 975, 1118, 1348, 1389, 1756 |
| AluI | AGCT | 8 cut(s) | 394, 448, 491, 975, 1118, 1348, 1389, 1756 |
| Alw21I | GWGCWC | 1 cut(s) | 396 |
| Alw26I | GTCTC | 6 cut(s) | 329, 1241, 1592, 1601, 1632, 1685 |
| AlwI | GGATC | 4 cut(s) | 1227, 1312, 1575, 1744 |
| Ama87I | CYCGRG | 2 cut(s) | 1418, 1600 |
| AoxI | GGCC | 4 cut(s) | 261, 1048, 1127, 1552 |
| ApeKI | GCWGC | 1 cut(s) | 861 |
| ApoI | RAATTY | 7 cut(s) | 567, 1022, 1055, 1066, 1463, 1483, 1726 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 50, 638, 825 |
| AspS9I | GGNCC | 2 cut(s) | 92, 1049 |
| AsuC2I | CCSGG | 2 cut(s) | 1601, 1602 |
| AsuHPI | GGTGA | 2 cut(s) | 296, 322 |
| AvaI | CYCGRG | 2 cut(s) | 1418, 1600 |
| AvaII | GGWCC | 1 cut(s) | 92 |
| BaeGI | GKGCMC | 1 cut(s) | 1607 |
| BanII | GRGCYC | 1 cut(s) | 396 |
| BauI | CACGAG | 1 cut(s) | 840 |
| BbsI | GAAGAC | 2 cut(s) | 848, 1195 |
| Bbv12I | GWGCWC | 1 cut(s) | 396 |
| BbvI | GCAGC | 1 cut(s) | 873 |
| BccI | CCATC | 6 cut(s) | 63, 1178, 1329, 1333, 1643, 1756 |
| BceAI | ACGGC | 2 cut(s) | 849, 1623 |
| BciT130I | CCWGG | 2 cut(s) | 852, 1506 |
| BciVI | GTATCC | 1 cut(s) | 1107 |
| BclI | TGATCA | 1 cut(s) | 85 |
| BcnI | CCSGG | 2 cut(s) | 1601, 1602 |
| BcoDI | GTCTC | 6 cut(s) | 329, 1241, 1592, 1601, 1632, 1685 |
| BcuI | ACTAGT | 3 cut(s) | 97, 361, 1559 |
| BfuI | GTATCC | 1 cut(s) | 1107 |
| BisI | GCNGC | 1 cut(s) | 862 |
| BlsI | GCNGC | 1 cut(s) | 863 |
| Bme1390I | CCNGG | 4 cut(s) | 852, 1506, 1601, 1602 |
| Bme18I | GGWCC | 1 cut(s) | 92 |
| BmeT110I | CYCGRG | 2 cut(s) | 1418, 1600 |
| BmgT120I | GGNCC | 2 cut(s) | 92, 1049 |
| BmiI | GGNNCC | 3 cut(s) | 175, 849, 1051 |
| BmrFI | CCNGG | 4 cut(s) | 852, 1506, 1601, 1602 |
| BmsI | GCATC | 4 cut(s) | 780, 990, 1143, 1643 |
| BpiI | GAAGAC | 2 cut(s) | 848, 1195 |
| BpmI | CTGGAG | 1 cut(s) | 1574 |
| BpuEI | CTTGAG | 2 cut(s) | 410, 1298 |
| BpuMI | CCSGG | 2 cut(s) | 1601, 1602 |
| BsaI | GGTCTC | 1 cut(s) | 1241 |
| BsaJI | CCNNGG | 2 cut(s) | 1505, 1600 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 30, 844, 1180, 1466, 1606 |
| Bse3DI | GCAATG | 2 cut(s) | 648, 1329 |
| BseBI | CCWGG | 2 cut(s) | 852, 1506 |
| BseDI | CCNNGG | 2 cut(s) | 1505, 1600 |
| BseGI | GGATG | 8 cut(s) | 166, 795, 1189, 1321, 1325, 1490, 1654, 1658 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 30, 844, 1180, 1466, 1606 |
| BseMI | GCAATG | 2 cut(s) | 648, 1329 |
| BseMII | CTCAG | 2 cut(s) | 63, 1509 |
| BseRI | GAGGAG | 2 cut(s) | 317, 860 |
| BseSI | GKGCMC | 1 cut(s) | 1607 |
| BseXI | GCAGC | 1 cut(s) | 873 |
| BshFI | GGCC | 4 cut(s) | 263, 1050, 1129, 1554 |
| BsiHKAI | GWGCWC | 1 cut(s) | 396 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1418, 1600 |
| BsiSI | CCGG | 4 cut(s) | 264, 1126, 1174, 1601 |
| BslFI | GGGAC | 1 cut(s) | 1522 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 30, 844, 1180, 1466, 1606 |
| BsmAI | GTCTC | 6 cut(s) | 329, 1241, 1592, 1601, 1632, 1685 |
| BsmBI | CGTCTC | 1 cut(s) | 329 |
| BsmFI | GGGAC | 1 cut(s) | 1522 |
| BsmI | GAATGC | 2 cut(s) | 653, 992 |
| BsnI | GGCC | 4 cut(s) | 263, 1050, 1129, 1554 |
| Bso31I | GGTCTC | 1 cut(s) | 1241 |
| BsoBI | CYCGRG | 2 cut(s) | 1418, 1600 |
| Bsp1286I | GDGCHC | 2 cut(s) | 396, 1607 |
| Bsp143I | GATC | 7 cut(s) | 85, 421, 769, 1219, 1317, 1567, 1736 |
| BspACI | CCGC | 3 cut(s) | 367, 1709, 1793 |
| BspANI | GGCC | 4 cut(s) | 263, 1050, 1129, 1554 |
| BspCNI | CTCAG | 2 cut(s) | 64, 1510 |
| BspLI | GGNNCC | 3 cut(s) | 175, 849, 1051 |
| BspPI | GGATC | 4 cut(s) | 1227, 1312, 1575, 1744 |
| BspTNI | GGTCTC | 1 cut(s) | 1241 |
| BsrDI | GCAATG | 2 cut(s) | 648, 1329 |
| BssECI | CCNNGG | 2 cut(s) | 1505, 1600 |
| BssMI | GATC | 7 cut(s) | 85, 421, 769, 1219, 1317, 1567, 1736 |
| BssSI | CACGAG | 1 cut(s) | 840 |
| Bst2BI | CACGAG | 1 cut(s) | 840 |
| Bst2UI | CCWGG | 2 cut(s) | 852, 1506 |
| Bst4CI | ACNGT | 2 cut(s) | 939, 1307 |
| Bst6I | CTCTTC | 3 cut(s) | 429, 954, 1116 |
| BstC8I | GCNNGC | 1 cut(s) | 1140 |
| BstDEI | CTNAG | 5 cut(s) | 72, 996, 1223, 1518, 1806 |
| BstF5I | GGATG | 8 cut(s) | 166, 795, 1189, 1321, 1325, 1490, 1654, 1658 |
| BstKTI | GATC | 7 cut(s) | 88, 424, 772, 1222, 1320, 1570, 1739 |
| BstMAI | GTCTC | 6 cut(s) | 329, 1241, 1592, 1601, 1632, 1685 |
| BstMBI | GATC | 7 cut(s) | 85, 421, 769, 1219, 1317, 1567, 1736 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 981, 1135, 1354, 1717, 1773 |
| BstNI | CCWGG | 2 cut(s) | 852, 1506 |
| BstNSI | RCATGY | 1 cut(s) | 155 |
| BstSCI | CCNGG | 4 cut(s) | 850, 1504, 1599, 1600 |
| BstSLI | GKGCMC | 1 cut(s) | 1607 |
| BstV1I | GCAGC | 1 cut(s) | 873 |
| BstV2I | GAAGAC | 2 cut(s) | 848, 1195 |
| BstX2I | RGATCY | 3 cut(s) | 1219, 1317, 1567 |
| BstYI | RGATCY | 3 cut(s) | 1219, 1317, 1567 |
| BsuI | GTATCC | 1 cut(s) | 1107 |
| BsuRI | GGCC | 4 cut(s) | 263, 1050, 1129, 1554 |
| BtsCI | GGATG | 8 cut(s) | 166, 795, 1189, 1321, 1325, 1490, 1654, 1658 |
| Cac8I | GCNNGC | 1 cut(s) | 1140 |
| Cfr13I | GGNCC | 2 cut(s) | 92, 1049 |
| Cfr9I | CCCGGG | 1 cut(s) | 1600 |
| CviAII | CATG | 5 cut(s) | 89, 152, 794, 816, 893 |
| DdeI | CTNAG | 5 cut(s) | 72, 996, 1223, 1518, 1806 |
| DpnI | GATC | 7 cut(s) | 87, 423, 771, 1221, 1319, 1569, 1738 |
| DpnII | GATC | 7 cut(s) | 85, 421, 769, 1219, 1317, 1567, 1736 |
| DraI | TTTAAA | 1 cut(s) | 1618 |
| DraIII | CACNNNGTG | 1 cut(s) | 336 |
| EaeI | YGGCCR | 2 cut(s) | 261, 1127 |
| Eam1104I | CTCTTC | 3 cut(s) | 429, 954, 1116 |
| EarI | CTCTTC | 3 cut(s) | 429, 954, 1116 |
| Ecl136II | GAGCTC | 1 cut(s) | 394 |
| Eco24I | GRGCYC | 1 cut(s) | 396 |
| Eco31I | GGTCTC | 1 cut(s) | 1241 |
| Eco47I | GGWCC | 1 cut(s) | 92 |
| Eco53kI | GAGCTC | 1 cut(s) | 394 |
| Eco57I | CTGAAG | 3 cut(s) | 1169, 1643, 1742 |
| Eco88I | CYCGRG | 2 cut(s) | 1418, 1600 |
| EcoICRI | GAGCTC | 1 cut(s) | 394 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1049 |
| EcoRI | GAATTC | 1 cut(s) | 567 |
| EcoRII | CCWGG | 2 cut(s) | 850, 1504 |
| EcoT22I | ATGCAT | 1 cut(s) | 795 |
| EcoT38I | GRGCYC | 1 cut(s) | 396 |
| Esp3I | CGTCTC | 1 cut(s) | 329 |
| FaeI | CATG | 5 cut(s) | 92, 155, 797, 819, 896 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 626, 658 |
| FaqI | GGGAC | 1 cut(s) | 1522 |
| FatI | CATG | 5 cut(s) | 88, 151, 793, 815, 892 |
| FbaI | TGATCA | 1 cut(s) | 85 |
| Fnu4HI | GCNGC | 1 cut(s) | 862 |
| FokI | GGATG | 8 cut(s) | 173, 802, 1196, 1308, 1312, 1477, 1661, 1665 |
| FriOI | GRGCYC | 1 cut(s) | 396 |
| Fsp4HI | GCNGC | 1 cut(s) | 862 |
| GluI | GCNGC | 1 cut(s) | 862 |
| GsuI | CTGGAG | 1 cut(s) | 1574 |
| HaeIII | GGCC | 4 cut(s) | 263, 1050, 1129, 1554 |
| HapII | CCGG | 4 cut(s) | 264, 1126, 1174, 1601 |
| Hin1II | CATG | 5 cut(s) | 92, 155, 797, 819, 896 |
| HindIII | AAGCTT | 2 cut(s) | 1346, 1754 |
| HpaII | CCGG | 4 cut(s) | 264, 1126, 1174, 1601 |
| HphI | GGTGA | 2 cut(s) | 296, 322 |
| Hpy166II | GTNNAC | 3 cut(s) | 95, 947, 1339 |
| Hpy188I | TCNGA | 5 cut(s) | 522, 579, 1272, 1704, 1761 |
| Hpy8I | GTNNAC | 3 cut(s) | 95, 947, 1339 |
| HpyAV | CCTTC | 8 cut(s) | 130, 421, 670, 1110, 1237, 1466, 1505, 1539 |
| HpyCH4III | ACNGT | 2 cut(s) | 939, 1307 |
| HpyCH4IV | ACGT | 1 cut(s) | 322 |
| HpyCH4V | TGCA | 6 cut(s) | 628, 653, 793, 1295, 1334, 1374 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 981, 1135, 1354, 1717, 1773 |
| HpyF3I | CTNAG | 5 cut(s) | 72, 996, 1223, 1518, 1806 |
| HpySE526I | ACGT | 1 cut(s) | 322 |
| Hsp92II | CATG | 5 cut(s) | 92, 155, 797, 819, 896 |
| Ksp22I | TGATCA | 1 cut(s) | 85 |
| Kzo9I | GATC | 7 cut(s) | 85, 421, 769, 1219, 1317, 1567, 1736 |
| LmnI | GCTCC | 1 cut(s) | 847 |
| Lsp1109I | GCAGC | 1 cut(s) | 873 |
| LweI | GCATC | 4 cut(s) | 780, 990, 1143, 1643 |
| MaeII | ACGT | 1 cut(s) | 322 |
| MaeIII | GTNAC | 5 cut(s) | 242, 304, 401, 555, 1301 |
| MalI | GATC | 7 cut(s) | 87, 423, 771, 1221, 1319, 1569, 1738 |
| MboI | GATC | 7 cut(s) | 85, 421, 769, 1219, 1317, 1567, 1736 |
| MfeI | CAATTG | 1 cut(s) | 1536 |
| MflI | RGATCY | 3 cut(s) | 1219, 1317, 1567 |
| MhlI | GDGCHC | 2 cut(s) | 396, 1607 |
| MlyI | GAGTC | 4 cut(s) | 563, 584, 1238, 1603 |
| MmeI | TCCRAC | 1 cut(s) | 602 |
| Mph1103I | ATGCAT | 1 cut(s) | 795 |
| MroXI | GAANNNNTTC | 3 cut(s) | 50, 638, 825 |
| MslI | CAYNNNNRTG | 2 cut(s) | 63, 879 |
| MspI | CCGG | 4 cut(s) | 264, 1126, 1174, 1601 |
| MspR9I | CCNGG | 4 cut(s) | 852, 1506, 1601, 1602 |
| MunI | CAATTG | 1 cut(s) | 1536 |
| Mva1269I | GAATGC | 2 cut(s) | 653, 992 |
| MvaI | CCWGG | 2 cut(s) | 852, 1506 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 981, 1135, 1354, 1717, 1773 |
| NciI | CCSGG | 2 cut(s) | 1601, 1602 |
| NdeII | GATC | 7 cut(s) | 85, 421, 769, 1219, 1317, 1567, 1736 |
| NlaIII | CATG | 5 cut(s) | 92, 155, 797, 819, 896 |
| NlaIV | GGNNCC | 3 cut(s) | 175, 849, 1051 |
| NmuCI | GTSAC | 4 cut(s) | 242, 401, 555, 1301 |
| NsiI | ATGCAT | 1 cut(s) | 795 |
| NspI | RCATGY | 1 cut(s) | 155 |
| PaeR7I | CTCGAG | 1 cut(s) | 1418 |
| PciI | ACATGT | 1 cut(s) | 151 |
| PctI | GAATGC | 2 cut(s) | 653, 992 |
| PdmI | GAANNNNTTC | 3 cut(s) | 50, 638, 825 |
| PfeI | GAWTC | 8 cut(s) | 297, 611, 968, 1122, 1273, 1288, 1412, 1456 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1466 |
| PkrI | GCNGC | 1 cut(s) | 863 |
| PleI | GAGTC | 4 cut(s) | 562, 584, 1237, 1602 |
| PpsI | GAGTC | 4 cut(s) | 562, 584, 1237, 1602 |
| PscI | ACATGT | 1 cut(s) | 151 |
| Psp124BI | GAGCTC | 1 cut(s) | 396 |
| Psp6I | CCWGG | 2 cut(s) | 850, 1504 |
| PspGI | CCWGG | 2 cut(s) | 850, 1504 |
| PspN4I | GGNNCC | 3 cut(s) | 175, 849, 1051 |
| PspPI | GGNCC | 2 cut(s) | 92, 1049 |
| PsuI | RGATCY | 3 cut(s) | 1219, 1317, 1567 |
| RseI | CAYNNNNRTG | 2 cut(s) | 63, 879 |
| SacI | GAGCTC | 1 cut(s) | 396 |
| SatI | GCNGC | 1 cut(s) | 862 |
| Sau3AI | GATC | 7 cut(s) | 85, 421, 769, 1219, 1317, 1567, 1736 |
| Sau96I | GGNCC | 2 cut(s) | 92, 1049 |
| SchI | GAGTC | 4 cut(s) | 563, 584, 1238, 1603 |
| ScrFI | CCNGG | 4 cut(s) | 852, 1506, 1601, 1602 |
| SduI | GDGCHC | 2 cut(s) | 396, 1607 |
| SfaNI | GCATC | 4 cut(s) | 780, 990, 1143, 1643 |
| Sfr274I | CTCGAG | 1 cut(s) | 1418 |
| SinI | GGWCC | 1 cut(s) | 92 |
| SlaI | CTCGAG | 1 cut(s) | 1418 |
| SmaI | CCCGGG | 1 cut(s) | 1602 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 63, 879 |
| SmlI | CTYRAG | 3 cut(s) | 389, 1277, 1418 |
| SmoI | CTYRAG | 3 cut(s) | 389, 1277, 1418 |
| SpeI | ACTAGT | 3 cut(s) | 97, 361, 1559 |
| SsiI | CCGC | 3 cut(s) | 367, 1709, 1793 |
| SspI | AATATT | 4 cut(s) | 145, 704, 721, 1637 |
| SstI | GAGCTC | 1 cut(s) | 396 |
| StyD4I | CCNGG | 4 cut(s) | 850, 1504, 1599, 1600 |
| TaaI | ACNGT | 2 cut(s) | 939, 1307 |
| TaiI | ACGT | 1 cut(s) | 325 |
| TaqI | TCGA | 3 cut(s) | 42, 747, 1419 |
| TfiI | GAWTC | 8 cut(s) | 297, 611, 968, 1122, 1273, 1288, 1412, 1456 |
| TseFI | GTSAC | 4 cut(s) | 242, 401, 555, 1301 |
| TseI | GCWGC | 1 cut(s) | 861 |
| Tsp45I | GTSAC | 4 cut(s) | 242, 401, 555, 1301 |
| TspDTI | ATGAA | 6 cut(s) | 172, 177, 1355, 1493, 1521, 1760 |
| TspGWI | ACGGA | 1 cut(s) | 1774 |
| TspMI | CCCGGG | 1 cut(s) | 1600 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1466 |
| VpaK11BI | GGWCC | 1 cut(s) | 92 |
| XapI | RAATTY | 7 cut(s) | 567, 1022, 1055, 1066, 1463, 1483, 1726 |
| XbaI | TCTAGA | 1 cut(s) | 529 |
| XceI | RCATGY | 1 cut(s) | 155 |
| XhoI | CTCGAG | 1 cut(s) | 1418 |
| XmaI | CCCGGG | 1 cut(s) | 1600 |
| XmnI | GAANNNNTTC | 3 cut(s) | 50, 638, 825 |
| Zsp2I | ATGCAT | 1 cut(s) | 795 |