TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| NB-ARC | PF00931 | 10 - 177 | 5.4e-20 | NB-ARC domain |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 655 |
| AcsI | RAATTY | 1 cut(s) | 696 |
| AcuI | CTGAAG | 2 cut(s) | 488, 511 |
| AfaI | GTAC | 1 cut(s) | 135 |
| AgsI | TTSAA | 2 cut(s) | 27, 203 |
| AjnI | CCWGG | 1 cut(s) | 477 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 373, 405 |
| AluBI | AGCT | 5 cut(s) | 174, 500, 508, 552, 605 |
| AluI | AGCT | 5 cut(s) | 174, 500, 508, 552, 605 |
| Alw26I | GTCTC | 1 cut(s) | 599 |
| ApeKI | GCWGC | 1 cut(s) | 171 |
| ApoI | RAATTY | 1 cut(s) | 696 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 501 |
| AspS9I | GGNCC | 1 cut(s) | 475 |
| AsuHPI | GGTGA | 2 cut(s) | 428, 472 |
| AvaII | GGWCC | 1 cut(s) | 475 |
| BbvI | GCAGC | 1 cut(s) | 183 |
| BccI | CCATC | 1 cut(s) | 264 |
| BciT130I | CCWGG | 1 cut(s) | 479 |
| BcoDI | GTCTC | 1 cut(s) | 599 |
| BfaI | CTAG | 3 cut(s) | 243, 426, 602 |
| BfuAI | ACCTGC | 1 cut(s) | 655 |
| BglII | AGATCT | 1 cut(s) | 467 |
| BisI | GCNGC | 1 cut(s) | 172 |
| BlsI | GCNGC | 1 cut(s) | 173 |
| BmcAI | AGTACT | 1 cut(s) | 135 |
| Bme1390I | CCNGG | 1 cut(s) | 479 |
| Bme18I | GGWCC | 1 cut(s) | 475 |
| BmgT120I | GGNCC | 1 cut(s) | 475 |
| BmiI | GGNNCC | 1 cut(s) | 289 |
| BmrFI | CCNGG | 1 cut(s) | 479 |
| BmsI | GCATC | 2 cut(s) | 237, 421 |
| Bpu10I | CCTNAGC | 1 cut(s) | 543 |
| BsaBI | GATNNNNATC | 1 cut(s) | 348 |
| BsaI | GGTCTC | 1 cut(s) | 599 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 647, 677 |
| Bse1I | ACTGG | 1 cut(s) | 361 |
| Bse8I | GATNNNNATC | 1 cut(s) | 348 |
| BseBI | CCWGG | 1 cut(s) | 479 |
| BseGI | GGATG | 3 cut(s) | 76, 252, 275 |
| BseJI | GATNNNNATC | 1 cut(s) | 348 |
| BseMII | CTCAG | 3 cut(s) | 308, 462, 534 |
| BseNI | ACTGG | 1 cut(s) | 361 |
| BseXI | GCAGC | 1 cut(s) | 183 |
| BseYI | CCCAGC | 1 cut(s) | 250 |
| BsmAI | GTCTC | 1 cut(s) | 599 |
| Bso31I | GGTCTC | 1 cut(s) | 599 |
| Bsp143I | GATC | 2 cut(s) | 142, 467 |
| BspCNI | CTCAG | 3 cut(s) | 309, 463, 535 |
| BspLI | GGNNCC | 1 cut(s) | 289 |
| BspMI | ACCTGC | 1 cut(s) | 655 |
| BspQI | GCTCTTC | 1 cut(s) | 507 |
| BspTNI | GGTCTC | 1 cut(s) | 599 |
| BsrI | ACTGG | 1 cut(s) | 361 |
| BssMI | GATC | 2 cut(s) | 142, 467 |
| Bst2UI | CCWGG | 1 cut(s) | 479 |
| Bst4CI | ACNGT | 1 cut(s) | 557 |
| Bst6I | CTCTTC | 1 cut(s) | 507 |
| BstC8I | GCNNGC | 1 cut(s) | 522 |
| BstDEI | CTNAG | 3 cut(s) | 317, 471, 543 |
| BstEII | GGTNACC | 1 cut(s) | 536 |
| BstF5I | GGATG | 3 cut(s) | 76, 252, 275 |
| BstKTI | GATC | 2 cut(s) | 145, 470 |
| BstMAI | GTCTC | 1 cut(s) | 599 |
| BstMBI | GATC | 2 cut(s) | 142, 467 |
| BstNI | CCWGG | 1 cut(s) | 479 |
| BstPI | GGTNACC | 1 cut(s) | 536 |
| BstSCI | CCNGG | 1 cut(s) | 477 |
| BstV1I | GCAGC | 1 cut(s) | 183 |
| BstX2I | RGATCY | 1 cut(s) | 467 |
| BstYI | RGATCY | 1 cut(s) | 467 |
| BtsCI | GGATG | 3 cut(s) | 76, 252, 275 |
| BveI | ACCTGC | 1 cut(s) | 655 |
| Cac8I | GCNNGC | 1 cut(s) | 522 |
| Cfr13I | GGNCC | 1 cut(s) | 475 |
| Csp6I | GTAC | 1 cut(s) | 134 |
| CviAII | CATG | 3 cut(s) | 292, 452, 632 |
| CviJI | RGCY | 8 cut(s) | 174, 290, 377, 500, 508, 552, 605, 706 |
| CviKI_1 | RGCY | 8 cut(s) | 174, 290, 377, 500, 508, 552, 605, 706 |
| CviQI | GTAC | 1 cut(s) | 134 |
| DdeI | CTNAG | 3 cut(s) | 317, 471, 543 |
| DpnI | GATC | 2 cut(s) | 144, 469 |
| DpnII | GATC | 2 cut(s) | 142, 467 |
| Eam1104I | CTCTTC | 1 cut(s) | 507 |
| EarI | CTCTTC | 1 cut(s) | 507 |
| Eco31I | GGTCTC | 1 cut(s) | 599 |
| Eco47I | GGWCC | 1 cut(s) | 475 |
| Eco57I | CTGAAG | 2 cut(s) | 488, 511 |
| Eco91I | GGTNACC | 1 cut(s) | 536 |
| EcoO65I | GGTNACC | 1 cut(s) | 536 |
| EcoRII | CCWGG | 1 cut(s) | 477 |
| FaeI | CATG | 3 cut(s) | 295, 455, 635 |
| FaiI | YATR | 8 cut(s) | 86, 94, 293, 396, 453, 585, 633, 644 |
| FatI | CATG | 3 cut(s) | 291, 451, 631 |
| Fnu4HI | GCNGC | 1 cut(s) | 172 |
| FokI | GGATG | 3 cut(s) | 83, 259, 282 |
| Fsp4HI | GCNGC | 1 cut(s) | 172 |
| FspBI | CTAG | 3 cut(s) | 243, 426, 602 |
| GluI | GCNGC | 1 cut(s) | 172 |
| GsaI | CCCAGC | 1 cut(s) | 254 |
| Hin1II | CATG | 3 cut(s) | 295, 455, 635 |
| HinfI | GANTC | 2 cut(s) | 23, 147 |
| HphI | GGTGA | 2 cut(s) | 428, 472 |
| Hpy188I | TCNGA | 5 cut(s) | 184, 318, 358, 472, 530 |
| Hpy188III | TCNNGA | 2 cut(s) | 27, 338 |
| HpyAV | CCTTC | 4 cut(s) | 186, 278, 527, 535 |
| HpyCH4III | ACNGT | 1 cut(s) | 557 |
| HpyCH4IV | ACGT | 1 cut(s) | 313 |
| HpyCH4V | TGCA | 1 cut(s) | 631 |
| HpyF3I | CTNAG | 3 cut(s) | 317, 471, 543 |
| HpySE526I | ACGT | 1 cut(s) | 313 |
| Hsp92II | CATG | 3 cut(s) | 295, 455, 635 |
| Kzo9I | GATC | 2 cut(s) | 142, 467 |
| LguI | GCTCTTC | 1 cut(s) | 507 |
| LmnI | GCTCC | 1 cut(s) | 287 |
| Lsp1109I | GCAGC | 1 cut(s) | 183 |
| LweI | GCATC | 2 cut(s) | 237, 421 |
| MaeI | CTAG | 3 cut(s) | 243, 426, 602 |
| MaeII | ACGT | 1 cut(s) | 313 |
| MaeIII | GTNAC | 2 cut(s) | 222, 536 |
| MalI | GATC | 2 cut(s) | 144, 469 |
| MboI | GATC | 2 cut(s) | 142, 467 |
| MboII | GAAGA | 5 cut(s) | 47, 307, 398, 477, 494 |
| MflI | RGATCY | 1 cut(s) | 467 |
| MluCI | AATT | 5 cut(s) | 12, 108, 158, 671, 696 |
| MmeI | TCCRAC | 1 cut(s) | 345 |
| MnlI | CCTC | 4 cut(s) | 296, 466, 609, 696 |
| MroXI | GAANNNNTTC | 1 cut(s) | 501 |
| MseI | TTAA | 6 cut(s) | 42, 264, 447, 609, 674, 710 |
| MspR9I | CCNGG | 1 cut(s) | 479 |
| MvaI | CCWGG | 1 cut(s) | 479 |
| NdeII | GATC | 2 cut(s) | 142, 467 |
| NlaIII | CATG | 3 cut(s) | 295, 455, 635 |
| NlaIV | GGNNCC | 1 cut(s) | 289 |
| PciSI | GCTCTTC | 1 cut(s) | 507 |
| PdmI | GAANNNNTTC | 1 cut(s) | 501 |
| PfeI | GAWTC | 2 cut(s) | 23, 147 |
| PkrI | GCNGC | 1 cut(s) | 173 |
| Psp6I | CCWGG | 1 cut(s) | 477 |
| PspEI | GGTNACC | 1 cut(s) | 536 |
| PspFI | CCCAGC | 1 cut(s) | 250 |
| PspGI | CCWGG | 1 cut(s) | 477 |
| PspN4I | GGNNCC | 1 cut(s) | 289 |
| PspPI | GGNCC | 1 cut(s) | 475 |
| PsuI | RGATCY | 1 cut(s) | 467 |
| RsaI | GTAC | 1 cut(s) | 135 |
| RsaNI | GTAC | 1 cut(s) | 134 |
| SapI | GCTCTTC | 1 cut(s) | 507 |
| SaqAI | TTAA | 6 cut(s) | 42, 264, 447, 609, 674, 710 |
| SatI | GCNGC | 1 cut(s) | 172 |
| Sau3AI | GATC | 2 cut(s) | 142, 467 |
| Sau96I | GGNCC | 1 cut(s) | 475 |
| ScaI | AGTACT | 1 cut(s) | 135 |
| ScrFI | CCNGG | 1 cut(s) | 479 |
| SfaNI | GCATC | 2 cut(s) | 237, 421 |
| SinI | GGWCC | 1 cut(s) | 475 |
| Sse9I | AATT | 5 cut(s) | 12, 108, 158, 671, 696 |
| SspMI | CTAG | 3 cut(s) | 243, 426, 602 |
| StyD4I | CCNGG | 1 cut(s) | 477 |
| TaaI | ACNGT | 1 cut(s) | 557 |
| TaiI | ACGT | 1 cut(s) | 316 |
| TaqI | TCGA | 1 cut(s) | 145 |
| TasI | AATT | 5 cut(s) | 12, 108, 158, 671, 696 |
| TatI | WGTACW | 1 cut(s) | 133 |
| TfiI | GAWTC | 2 cut(s) | 23, 147 |
| Tru1I | TTAA | 6 cut(s) | 42, 264, 447, 609, 674, 710 |
| Tru9I | TTAA | 6 cut(s) | 42, 264, 447, 609, 674, 710 |
| TseI | GCWGC | 1 cut(s) | 171 |
| TspDTI | ATGAA | 4 cut(s) | 68, 297, 308, 510 |
| TspGWI | ACGGA | 1 cut(s) | 282 |
| VpaK11BI | GGWCC | 1 cut(s) | 475 |
| XapI | RAATTY | 1 cut(s) | 696 |
| XmnI | GAANNNNTTC | 1 cut(s) | 501 |
| XspI | CTAG | 3 cut(s) | 243, 426, 602 |
| ZrmI | AGTACT | 1 cut(s) | 135 |