FvH4_2g14320

TMV resistance protein N-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0000007
Physical Location & Seq
Forward (+)
12579891 .. 12588753
8863 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g14320.t1

Sequence Viewer

Length: 5976 bp
ATGGCAGCAAGTACTCAGAGAGCCCTTGCGTCTCATCCTTCAGCTGAAACAGGTCCTAGGTGGAAGCACGATGTTTTTTTGAGTTTTAGGGGTGAAGACACCCGCAAGGGTTTTACATCCCACTTGTATCACGAATTGCACTATTGGCAAGCAATCAAGACTTTCAAGGATGACCGAGAGCTCGATATAGGATCAACTATTTCTCTAGAGCTCTTGAGCGCAATTCGAGAATCACAACTTGCCATTGTTGTTCTCTCGCCTCACTATGCTTCTTCCACCTGGTGCTTGGATGAACTAACAACGATTATTGAATGCATGGAGCCGAGAAATGCAATTCTGCCAATATTTTATGAGGTAATTCCCTCAGATGTTCGAAAGCAACAAGGGAGTTTTGCCGAAGCCTTCGCCATGCATGAAGAGAAGTTTGGAGAGGTCGATGCGGAGAGGGTGCAGCAATGGAGAATTGCATTAAGAAAGGTGGCCAATCTTTCAGGGTGGGATTCAAAGAATTACAAGTCTGAAAGAGAGCTCATCGAAGACATTGTAAAGTGTGTGTTGAGCAAAGTGCATCCTACTCGTAAATTGTTAGATTCCATAGAGCCGTTAGTAGGAATTGACTTTACACTTGAACAATTACGTTTGCTTTTAGCTCAGGAGGCTAATGATGTACGCTTTGTAGGAATATGGGGGATGGGTGGTATAGGGAAGACCACCATAGCTAAGTTGGTTTTTCAGAAGATTTCTCATCATTTTGAAGTTAAGAAGTTTCTTACTAATGTTAGAGAGGTTTCTGCAAAACATGGTACTCTAGTTGATTTACAAAAACAACTTCTTTCTCCAATATTGAAGGAAAGTATCACAGAAGTTTATGATGAAATGCAGGGAACCTTGTTTGCTAAGAATTGTTTAAGTAATAAAAAGGTTCTTCTTGTTCTTGATGATGTGGATCATGTAAATCAACTAGAGGTATTGGCCGGACATGAAGATTGGTTTGGTGCAGGAAGTAGAGTCATTATCACAACTCGAGATGAACGTCTACTAGTTGAGCATCGGATAGAGCTGATTTATAAGATTGAAGGGTTAAATGATGAAGAAGCTCTCCAGCTCTTTAGTCAAAATGCTTTTCAAAAGGATCAATATGAGGAAGGTTTGCTAGAATTGTCCAAATCTTTTGTAAAGTATGCTAATGGGCTTCCGTTAGCTCTTAAAGTTTTGGGACGGTCTTTATATAAGAGAGGCCGAGATGAATGGATTAGTGCATTGGGTAAGCTAAAGAGGAGTCCTGGTAGAGAAATTTTTACTTCACTCAAAATAAGTTACGATAGACTAGATGAGACAGAGAAAGAAATTTTTCTTGATGTAGCATTTTTTCATAAGGGGAAGGACAAGGAGAAACTACTTGAAATACTAGACATAACTTATGACATTTCTTGTCTTGTTGGGATAAGTATGCTCATTGAGAAGTCTCTCCTGACTATTAGTAAATCCCTTTATGATAATTCACGCACCAACGTAGATATGCATGATTTGATACAAGAAATGGCCTGGGAAATAGTTCGGCAAGAGTCTCGCGATGAACCTGGTCGACGCAGCCGTTTGTGCCATCAAACGGACATATTTCATGTATTCCTAAACAACTCGGGAACACCAGCACTCAAAGGCATTGTCCTCTGCTTGCCCGAATCAAAAACGGTAGACTGGAATTGTGAAGCCTTCTCCAAAATGTCTCGACTAAGGCATGTTGAATTTCAGAATGTGAACATACCTTCAGGTCCAAGTTTTCTTTCAAAGAATCTGATAACTCTCAAATGGAGCTGGTATCCTTCCAAATCTCTTCCGTATGACTTTCAATTGCATTTCCTTACTGAGCTTAAGATGCCTCGAAGCAACCTTGTTCAGCTTTGGGAGGGAGCACAGGATTTGCCCAACCTGAAATATATCGATCTTGTATATTCCGAAAACTTGACCAAGACCCCAGATTTCTCATGCACTCCTAATATTAAGTGGTTGGAACTTCAAGATTGTACAAATTTAGTTGAGATTCACCCTTCCATTGCAAGGCTCAAAAGGCTCGAAAGATTAGATTTATCAGGCTGTACAAGTATAATGAGTCTCCCTACGGAGTTTGAAATGGATTCTCTTAAGTTTTTCAGTGTTAAGCATTGCTTAAAACTGAAAAGGATTCCAGAATTTGGGAAACGGATGAAAAGTTTGTTTCAACTTTGGCTAGGTGGGACTGCTATTGAGAAAGTCCCTTCATCGATTGACCGCCAAGTTGGCCTTAAGTTTCTGAATCTAGACCATTGTGAAAGCCTTTCCTGTCTTCCCAATGCCATCTGCAATCTGAAGTTTCTCTTACAGCTAGATATCTCTGGATGCTCCAGACTAGGGAAACTCCCAGAAAACATAGGGAATATGGGGAGTTTGGAGTATTTATATATGAATGGGACTTCTATCAGAGACTTGCCACCCTCCCTTTCACTTTTGAAAAATCTCCAAGTACTAGAATCTCGTGCATCACCAATAAAGAAACAAGATGGGAGTTTCTGGGGTTTGTTTGTAAGAAAAAGTCCAGAACCTTTGGGATTAGTGTTGCATTCTTTAAATGGTTTACGCTCCCTGAAGCAGTTATATCTAAGTGATTGTAATATTTGTCAAGGAGCTATCCCCGATGACATTGGTTGCTTGTCCTCTGTGCAACAATTGGATCTTAGTGGAAATAATTTTGTTACCTTACCGTCAAGCATTAAAAGGCTTTCTAGTCTTCATGTATTTTGGTTGCAGAGGTGCCAAAGGCTTCAACAATTACCAGATCTTCCATCAAACAGTTCATTACATATATATGCAGATGGTTGCAGTTCATTGGTTATGTTGTCAGAACCATCAGAGTTGATGAGATCTTCCATTAAATCTCAGGGATTTTCTTTCACTTCCGCCAATTGCTTTGGACTGGTTGATAATGAAGGCTGTAATAATGGAATATTTTCAATGCTGAGACGATTGGCTACACAGGGGATCTCCACTGATTATGATAACTTCTCTTTCAATATCATAACTCCTGGAAGTAAACTTGCAGACTGGTTCACGTTCCAAAGTGAGGGAAGTTTACTAACTGTGGAGCTTCCTCCTCCGGATTCCTGGACATCATCAAAGTGGATGGGGCTTGCTTTTTGCATCACGTTTGCTGATGATCCAGCAGCTTCTCTTGAATATGACTATTCAACAATTAAATGTTCATCAGAAGGGATAAACCCTCTCTTGAGGCAGTCGGGGAAAAAGGGCGAAATTGTGAAAGATCACTTTTGGGTATTTTATTTGCATCGTCAAGAGTATTGGAATGAAACCACAACCAGTACTAGTCACGTTAGGTTTTCATTCCAAACGTTCTGCCGCACGAACAAGGTACCATTGGTGTTGAGTATTGATGAGCTCAACAAGTATGGGAAAATTTCGACCGAGGGTGGGTATAATGTAAAGAAATGCGGGGCGCGTTTGGTGTACGAAGATGATTTAGAAGAACTCCTCAACGGAACGAGGAACATCCTTCATCAGCCAACAAGTGAATATTGTGACGAGGAGGAGTCAGGCAGAAGTAGCGACACCCGTGTGGGGTTCATATCCCATTTGTACGATGAACTCCAGTACTGGCAAGCCATCAGGACTTTCAAGGACGACAAAGAGCTTGAAGTTGGTGCAAGTATTTCTCCGGAGCTATTGAGCGCAATCGAACAATCACATCTTGCCATCGTTGTTCTCTCGCCAAATTATGCTACTTCTGGGTGGTGGTTGGATGAACTTGCAAAGATCTTCGAATCCATGGAAACAAGGGATAACGCAATCCTTCCCGTTTTCTTTCATGTGGATCCTTGCGATGTACGATCTGAGAGAGAGCTCATCAAACTCGTCGTCAAATGTGTTTGGAGAAAGGTGCGTCCTACAATCACATTGTCACACTCTGCAGACAAGTTAGTCGGAATTGATTTTGGACTTGGGGAACTGGGTATTCTATTAGCTCCTGAGGTGAATCATGTTCGATTTATAGGAATATGGGGTATGGGTGGGATTGGTAAGACAACTCTTGCTAAACTAGTATTTGAGAGGATTTCCCATCAGTTTGAGGTGGGCAAGTTTCTTCTCAATGTTAGAGAAGTTTCTTCAAAACATGGCACTCTAGTTAATTTTCAAAAACAGCTTCTTTACCCAATCTTGAAGGAAAATATTGCACAAGTTTGGGATGAACAAGAAGGAACCTTTTTCATTAGGAAATGCTTTTCTAATAAAAAGGTTCTTCTCATTCTTGATGATGTTGATCACGTTAACCAACTACAATTACTGGCTGGAAAAAGATCTTGGTTTGGTGCTGGAAGCAGAATTATTGTTACAACTAGAGATGAACGTTTGTTCATTGAACATGATATAGAAATAACCTTTAAGGTAGTGGGACTAAATGACAATGAAGCTCTTGAGCTCTTTAGTCAGAATGCATGTAAGAAGGATCAGCCTGATGAAGAGTTTTTGCAATTGTGTTTCATAGACTATGCCAAAGGGCTTCCATTAGCACTTAAAGTTCTGGGACGCTCTTTGTATAAGAGAGGTATAGATGAGTGGATTAGTGCATTGGATAAGCTTAAGAATGATCCTGATACAGAAATTTTTAGTTCACTGAAGCTGAGTTATGATGGGTTGTGTGAAATGAGCAAGAGTATTTTTCTTGATGTTGCTTTCTTACACAAGGGGAAGAACAAGAAGAGAATAATTGACATACTGGACAGAACTTGTGACTTTTCCAGTCTTTATGGGTTAAATGTTCTCATTGAGAAATCTCTCTTGACAATTGAGAGGGGCAGTACGGTAGAGGTGCATGATTTGATTCAAGAAATGGCATGGGAAATTGTTTGTCGGGAGTCTCGTGATGAACCTGGTCGACGCAGTCGTTTGTGTCATCATAAAGACATATATCATGTATTCTCAAGAAATACGGGAACAAAAGCAATCCAATGCATCCGCTTATGCTTACAACGATTTGAACAGGCAGACTCAAACTTGACTTCTGACAGCCTTTCTAAGATGCTGGGACTAACTTTTCTTGAATTTGATAGGTTTATGACTTATTCATGCCCCAAGTTCCTCCCTAATTCCTTGAAAGTTCTTATATGGAGTTGGTATCCTTCCAAATTTCTTCCAGCTAGTTTCCGACCAAATTTACTCACTGAACTTAGAATGGAAAATAGCAATCTTGTTGAGCTTTGGGATGGAAAAATGGACTTTCCAAACTTGAAATATATGGATCTTCGGAATTCTAAAAATTTGACCAAGACCCCAGATGTCACAGGTATTCCGAATCTTGAGGTGTTGCAACTTCGACTTTGTACTCGTTTAGTTGAGATCCACCCATCCATTGCCATCCACAAAAAACTTCGACATTTAGAGCTTCATGGGTGTACAGGTATTAGTAGTTTACCTAGAAAGATAGAAATGTATTCTCTTGAGCTGTTTGGACTTGCTGGTTGCTCAAAAGTGAAAAGGATTCCAGAATTTGGAAGCCAGATGAAACCTTGGTTAAGTCTTAAGCTAAGTGGGACTGCTATTGAGATAATTCCTTCCTCAATTAGACATCAGGTTGGCCTTGTTAAGCTGGAGCTAAGAAATTGCAATAATCTCTCGAGTCTTCCCTGTTCCATAGTTGATAATCTGAAGCGTCTGAAATACCTCGATCTGGATGATTGCTCAAAACTTGACAAACTCCCAGAGAACTTGGGGAAAATGGAGAGTTTGGAGGAGCTTCGCATTAGTGGAACTGCAATAACAGAGCCGCCACACTTCATCACTCTTTTGAGAAATCTCAAAGACCTACATTTCAGAAGATCGTGTATAAGGAAGCTTGACGGTGGACTTTGGGGCATATTCGCAAGAAAGAGCCCGGAACCTTTGGGCTTGATGTTGCCTTCTCTAAGGGATTTACGCTCTTTGGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_3 NB-ARC TIR

Protein Analysis

1992

Amino Acids

226.97

Weight (kDa)

6.58

Isoelectric Point (pI)

46.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 22 - 195 1.5e-52 TIR domain
TIR_2 PF13676 25 - 121 1.1e-12 TIR domain
NB-ARC PF00931 215 - 378 8.2e-21 NB-ARC domain
WHD_ROQ1 PF23282 445 - 523 9.5e-10 Disease resistance protein Roq1-like, winged-helix domain
LRR_13 PF23286 712 - 796 3.1e-06 Disease resistance protein RPS4B-like, leucine-rich repeats
LRR_14 PF23598 755 - 839 1.4e-09 Leucine-rich repeat region
LRR_14 PF23598 865 - 939 9e-07 Leucine-rich repeat region
C-JID PF20160 1020 - 1172 5.3e-11 C-JID domain
TIR PF01582 1196 - 1294 2.1e-27 TIR domain
TIR_2 PF13676 1205 - 1290 2e-09 TIR domain
NB-ARC PF00931 1342 - 1499 6.7e-18 NB-ARC domain
WHD_ROQ1 PF23282 1566 - 1634 2.7e-10 Disease resistance protein Roq1-like, winged-helix domain
LRR_14 PF23598 1855 - 1955 3.1e-12 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000007)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G17680 AT5G17680
fragaria_vesca FvH4_1g04740 FvH4_1g04740 FvH4_1g04740 FvH4_1g07010 FvH4_1g07020 FvH4_1g11570 FvH4_1g11570 FvH4_1g11570 FvH4_1g11570 FvH4_1g11570 FvH4_1g11570 FvH4_1g11570 FvH4_1g11570 FvH4_1g11570 FvH4_1g11570 FvH4_1g11580 FvH4_1g17862 FvH4_1g22370 FvH4_1g22372 FvH4_1g22377 FvH4_1g22512 FvH4_2g00540 FvH4_2g00541 FvH4_2g00550 FvH4_2g00950 FvH4_2g14320 FvH4_2g14320 FvH4_2g14321 FvH4_3g33030 FvH4_3g33030 FvH4_3g33030 FvH4_3g35620 FvH4_3g35630 FvH4_3g36130 FvH4_3g36131 FvH4_3g36140 FvH4_5g02251 FvH4_6g04060 FvH4_6g04250 FvH4_6g04250 FvH4_6g04250 FvH4_6g04350 FvH4_6g04730 FvH4_6g04730 FvH4_6g05490 FvH4_6g05610 FvH4_6g05610 FvH4_7g12160 FvH4_7g12160 FvH4_7g12160 FvH4_7g21060 FvH4_7g21060 FvH4_7g21060 FvH4_7g21070 FvH4_7g21140 FvH4_7g21140 FvH4_7g21140 FvH4_7g21140 FvH4_7g21140 FvH4_7g21140 FvH4_7g21150 FvH4_7g21170 FvH4_7g21170 FvH4_7g21171 FvH4_7g21172 FvH4_7g21180 FvH4_7g21201 FvH4_7g21201 FvH4_7g21230 FvH4_7g21230 FvH4_7g21230 FvH4_7g28631 FvH4_7g32440 FvH4_7g32460 FvH4_7g32464 FvH4_7g32470 FvH4_7g32480 FvH4_7g32710 FvH4_7g32720 FvH4_7g32740 FvH4_7g32740 FvH4_7g32740 FvH4_7g32760 FvH4_7g33140
malus_domestica MD00G1125900.v1.1 MD00G1126000.v1.1 MD00G1126100.v1.1 MD04G1054900.v1.1 MD05G1007000.v1.1 MD05G1018900.v1.1 MD05G1019700.v1.1 MD05G1020000.v1.1 MD05G1020100.v1.1 MD05G1022400.v1.1 MD05G1022500.v1.1 MD05G1022600.v1.1 MD05G1022800.v1.1 MD05G1028700.v1.1 MD05G1100200.v1.1 MD08G1021900.v1.1 MD10G1006500.v1.1 MD10G1006900.v1.1 MD10G1007200.v1.1 MD10G1007600.v1.1 MD10G1015300.v1.1 MD10G1018400.v1.1 MD10G1018500.v1.1 MD10G1018900.v1.1 MD10G1019200.v1.1 MD10G1019700.v1.1 MD10G1020000.v1.1 MD10G1020100.v1.1 MD10G1020900.v1.1 MD10G1021000.v1.1 MD10G1034300.v1.1 MD10G1034400.v1.1 MD10G1034700.v1.1 MD10G1034800.v1.1 MD10G1035000.v1.1 MD10G1035400.v1.1 MD10G1232400.v1.1 MD15G1377300.v1.1 MD15G1377400.v1.1
prunus_persica Prupe.1G165300_v2.0.a1 Prupe.1G165300_v2.0.a1 Prupe.1G523900_v2.0.a1 Prupe.1G524000_v2.0.a1 Prupe.1G526300_v2.0.a1 Prupe.2G059000_v2.0.a1 Prupe.2G059000_v2.0.a1 Prupe.2G059000_v2.0.a1 Prupe.2G059000_v2.0.a1 Prupe.3G169500_v2.0.a1 Prupe.6G109800_v2.0.a1 Prupe.7G026100_v2.0.a1 Prupe.7G037000_v2.0.a1 Prupe.7G037000_v2.0.a1 Prupe.7G037600_v2.0.a1 Prupe.8G005100_v2.0.a1 Prupe.8G005300_v2.0.a1 Prupe.8G021700_v2.0.a1 Prupe.8G022800_v2.0.a1 Prupe.8G023100_v2.0.a1 Prupe.8G023200_v2.0.a1 Prupe.8G023200_v2.0.a1 Prupe.8G023300_v2.0.a1 Prupe.8G023500_v2.0.a1 Prupe.8G023600_v2.0.a1 Prupe.8G023700_v2.0.a1 Prupe.8G023700_v2.0.a1 Prupe.8G023700_v2.0.a1 Prupe.8G023800_v2.0.a1 Prupe.8G023800_v2.0.a1 Prupe.8G023800_v2.0.a1 Prupe.8G023900_v2.0.a1 Prupe.8G026500_v2.0.a1 Prupe.8G026500_v2.0.a1 Prupe.8G026700_v2.0.a1 Prupe.8G026700_v2.0.a1 Prupe.8G026800_v2.0.a1 Prupe.8G026800_v2.0.a1 Prupe.8G026800_v2.0.a1 Prupe.8G026800_v2.0.a1 Prupe.8G027000_v2.0.a1 Prupe.8G027100_v2.0.a1 Prupe.8G027300_v2.0.a1 Prupe.8G027300_v2.0.a1 Prupe.8G027300_v2.0.a1 Prupe.8G032000_v2.0.a1 Prupe.8G034700_v2.0.a1 Prupe.8G046500_v2.0.a1 Prupe.8G046700_v2.0.a1 Prupe.8G056700_v2.0.a1 Prupe.8G056700_v2.0.a1 Prupe.8G056700_v2.0.a1
pyrus_communis pycom05g01130 pycom05g01150 pycom05g01160 pycom05g01330 pycom05g01340 pycom05g01350 pycom05g01360 pycom05g01390 pycom05g01400 pycom05g01420 pycom05g01430 pycom10g00470 pycom10g00970 pycom10g00980 pycom10g00990 pycom10g01000 pycom10g01340 pycom10g01350 pycom10g01360 pycom10g01390 pycom10g01400 pycom10g01410 pycom10g01420 pycom10g01430 pycom10g02280 pycom10g02300 pycom10g02310 pycom10g02330 pycom10g02340 pycom10g02370 pycom10g02390 pycom10g02400 pycom12g00770 pycom15g33690 pycom15g33720 pycom15g33740 pycom15g33750 pycom15g33800
rosa_chinensis RchiOBHm_Chr1g0340831 RchiOBHm_Chr1g0365481 RchiOBHm_Chr1g0365531 RchiOBHm_Chr1g0365541 RchiOBHm_Chr1g0365551 RchiOBHm_Chr1g0365561 RchiOBHm_Chr1g0365641 RchiOBHm_Chr1g0382021 RchiOBHm_Chr1g0382041 RchiOBHm_Chr1g0382221 RchiOBHm_Chr1g0382261 RchiOBHm_Chr1g0382271 RchiOBHm_Chr1g0382281 RchiOBHm_Chr1g0382321 RchiOBHm_Chr3g0465111 RchiOBHm_Chr3g0481881 RchiOBHm_Chr3g0481891 RchiOBHm_Chr3g0481981 RchiOBHm_Chr3g0482041 RchiOBHm_Chr5g0055581 RchiOBHm_Chr5g0060381 RchiOBHm_Chr5g0061111 RchiOBHm_Chr5g0063811 RchiOBHm_Chr5g0064561 RchiOBHm_Chr5g0064571 RchiOBHm_Chr5g0064661 RchiOBHm_Chr5g0064701 RchiOBHm_Chr5g0064731 RchiOBHm_Chr5g0064871 RchiOBHm_Chr6g0245321 RchiOBHm_Chr6g0245331 RchiOBHm_Chr6g0245341 RchiOBHm_Chr6g0245481 RchiOBHm_Chr6g0245501 RchiOBHm_Chr6g0245551 RchiOBHm_Chr6g0246391 RchiOBHm_Chr6g0246501 RchiOBHm_Chr6g0246541 RchiOBHm_Chr6g0246601 RchiOBHm_Chr6g0246671 RchiOBHm_Chr6g0246721 RchiOBHm_Chr6g0246751 RchiOBHm_Chr6g0246861 RchiOBHm_Chr6g0246881 RchiOBHm_Chr6g0246891 RchiOBHm_Chr6g0249221 RchiOBHm_Chr6g0249691 RchiOBHm_Chr6g0249721 RchiOBHm_Chr6g0249731 RchiOBHm_Chr6g0249751 RchiOBHm_Chr6g0249841 RchiOBHm_Chr6g0249881 RchiOBHm_Chr6g0249921 RchiOBHm_Chr6g0249931 RchiOBHm_Chr6g0249951 RchiOBHm_Chr6g0250011 RchiOBHm_Chr6g0250021 RchiOBHm_Chr6g0250081 RchiOBHm_Chr6g0250091 RchiOBHm_Chr6g0250131 RchiOBHm_Chr6g0250161 RchiOBHm_Chr6g0250201 RchiOBHm_Chr6g0250241 RchiOBHm_Chr6g0250291 RchiOBHm_Chr6g0250301 RchiOBHm_Chr6g0250371 RchiOBHm_Chr6g0250771 RchiOBHm_Chr6g0250981 RchiOBHm_Chr6g0251301 RchiOBHm_Chr6g0251321 RchiOBHm_Chr6g0251341 RchiOBHm_Chr6g0251441 RchiOBHm_Chr6g0251471 RchiOBHm_Chr6g0272741 RchiOBHm_Chr6g0276581 RchiOBHm_Chr6g0276591 RchiOBHm_Chr6g0276631 RchiOBHm_Chr6g0284581 RchiOBHm_Chr6g0284641 RchiOBHm_Chr6g0285091 RchiOBHm_Chr7g0217981
rosa_laevigata RLG00000002427 RLG00000003507 RLG00000008496 RLG00000012678 RLG00000012735 RLG00000012736 RLG00000013083 RLG00000013084 RLG00000013384 RLG00000013386 RLG00000013660 RLG00000015037 RLG00000015242 RLG00000015253 RLG00000015255 RLG00000015256 RLG00000015259 RLG00000015307 RLG00000015465 RLG00000015466 RLG00000015504 RLG00000015506 RLG00000015507 RLG00000015510 RLG00000015513 RLG00000015544 RLG00000015545 RLG00000015549 RLG00000015550 RLG00000015552 RLG00000016855 RLG00000016858 RLG00000016859 RLG00000018281 RLG00000018283 RLG00000022622 RLG00000023379 RLG00000023937 RLG00000024655 RLG00000026187 RLG00000026189 RLG00000026190 RLG00000026191 RLG00000026192 RLG00000027420 RLG00000027421 RLG00000027661 RLG00000028903 RLG00000028904 RLG00000030248 RLG00000035359 RLG00000035360 RLG00000035361 RLG00000035429 RLG00000035456 RLG00000035679 RLG00000035680 RLG00000035681 RLG00000035735 RLG00000035738 RLG00000035844 RLG00000036364
rosa_multiflora Rmu_co8335069.1_g000001 Rmu_co8396115.1_g000001 Rmu_co8448557.1_g000001 Rmu_co8510855.1_g000001 Rmu_sc0000110.1_g000004 Rmu_sc0000110.1_g000007 Rmu_sc0000110.1_g000018 Rmu_sc0000110.1_g000019 Rmu_sc0000110.1_g000022 Rmu_sc0000110.1_g000023 Rmu_sc0000110.1_g000033 Rmu_sc0000110.1_g000037 Rmu_sc0000110.1_g000039 Rmu_sc0000276.1_g000031 Rmu_sc0000276.1_g000034 Rmu_sc0000411.1_g000006 Rmu_sc0000411.1_g000007 Rmu_sc0000452.1_g000027 Rmu_sc0000471.1_g000009 Rmu_sc0000507.1_g000020 Rmu_sc0000694.1_g000018 Rmu_sc0000701.1_g000002 Rmu_sc0000701.1_g000009 Rmu_sc0000701.1_g000010 Rmu_sc0000704.1_g000001 Rmu_sc0000704.1_g000042 Rmu_sc0000704.1_g000043 Rmu_sc0000969.1_g000002 Rmu_sc0001001.1_g000003 Rmu_sc0001066.1_g000004 Rmu_sc0001066.1_g000019 Rmu_sc0001209.1_g000023 Rmu_sc0001209.1_g000040 Rmu_sc0001209.1_g000043 Rmu_sc0001237.1_g000018 Rmu_sc0001246.1_g000016 Rmu_sc0001293.1_g000008 Rmu_sc0001293.1_g000011 Rmu_sc0001293.1_g000022 Rmu_sc0001293.1_g000023 Rmu_sc0001373.1_g000014 Rmu_sc0001382.1_g000001 Rmu_sc0001738.1_g000024 Rmu_sc0002025.1_g000009 Rmu_sc0002025.1_g000012 Rmu_sc0002025.1_g000013 Rmu_sc0002093.1_g000004 Rmu_sc0002202.1_g000008 Rmu_sc0002202.1_g000010 Rmu_sc0002202.1_g000011 Rmu_sc0002202.1_g000018 Rmu_sc0002406.1_g000014 Rmu_sc0002478.1_g000003 Rmu_sc0002535.1_g000042 Rmu_sc0002587.1_g000021 Rmu_sc0002587.1_g000023 Rmu_sc0002587.1_g000028 Rmu_sc0002587.1_g000039 Rmu_sc0002587.1_g000044 Rmu_sc0002587.1_g000048 Rmu_sc0002587.1_g000049 Rmu_sc0002793.1_g000005 Rmu_sc0003060.1_g000003 Rmu_sc0003060.1_g000004 Rmu_sc0003060.1_g000005 Rmu_sc0003131.1_g000001 Rmu_sc0003131.1_g000032 Rmu_sc0003255.1_g000009 Rmu_sc0003255.1_g000017 Rmu_sc0003270.1_g000028 Rmu_sc0003293.1_g000004 Rmu_sc0003293.1_g000008 Rmu_sc0003293.1_g000010 Rmu_sc0003352.1_g000009 Rmu_sc0003352.1_g000012 Rmu_sc0003386.1_g000012 Rmu_sc0003387.1_g000003 Rmu_sc0003387.1_g000007 Rmu_sc0003665.1_g000002 Rmu_sc0003811.1_g000001 Rmu_sc0004049.1_g000001 Rmu_sc0004191.1_g000039 Rmu_sc0004691.1_g000008 Rmu_sc0005257.1_g000014 Rmu_sc0005257.1_g000020 Rmu_sc0005685.1_g000005 Rmu_sc0006032.1_g000010 Rmu_sc0006638.1_g000016 Rmu_sc0006878.1_g000005 Rmu_sc0007049.1_g000005 Rmu_sc0007049.1_g000011 Rmu_sc0007049.1_g000012 Rmu_sc0007049.1_g000013 Rmu_sc0007049.1_g000014 Rmu_sc0007383.1_g000001 Rmu_sc0007383.1_g000005 Rmu_sc0007383.1_g000012 Rmu_sc0007558.1_g000003 Rmu_sc0007558.1_g000005 Rmu_sc0007722.1_g000001 Rmu_sc0008209.1_g000002 Rmu_sc0008209.1_g000008 Rmu_sc0008242.1_g000013 Rmu_sc0008965.1_g000001 Rmu_sc0009002.1_g000002 Rmu_sc0009002.1_g000006 Rmu_sc0009002.1_g000007 Rmu_sc0009002.1_g000010 Rmu_sc0009002.1_g000011 Rmu_sc0009227.1_g000011 Rmu_sc0009369.1_g000008 Rmu_sc0009380.1_g000013 Rmu_sc0009451.1_g000011 Rmu_sc0009952.1_g000008 Rmu_sc0009991.1_g000004 Rmu_sc0010993.1_g000005 Rmu_sc0010993.1_g000006 Rmu_sc0012343.1_g000012 Rmu_sc0014236.1_g000002 Rmu_sc0014912.1_g000002 Rmu_sc0014912.1_g000003 Rmu_sc0019669.1_g000001 Rmu_sc0020903.1_g000007 Rmu_sc0021230.1_g000001 Rmu_sc0022147.1_g000001 Rmu_sc0028629.1_g000002 Rmu_sc0031029.1_g000001 Rmu_sc0038922.1_g000001 Rmu_sc0039683.1_g000001 Rmu_sc0039712.1_g000001 Rmu_sc0043027.1_g000001 Rmu_ssc0000009.1_g000002 Rmu_ssc0000009.1_g000004 Rmu_ssc0000309.1_g000010
rosa_roxburghii Rroxscaffold_1G00014850 Rroxscaffold_1G00016420 Rroxscaffold_1G00016430 Rroxscaffold_1G00016970 Rroxscaffold_1G00016980 Rroxscaffold_1G00017020 Rroxscaffold_2G00103000 Rroxscaffold_2G00103010 Rroxscaffold_2G00121260 Rroxscaffold_2G00127090 Rroxscaffold_2G00127120 Rroxscaffold_2G00143350 Rroxscaffold_2G00143360 Rroxscaffold_3G00218090 Rroxscaffold_3G00232940 Rroxscaffold_3G00241540 Rroxscaffold_3G00241550 Rroxscaffold_4G00278190 Rroxscaffold_4G00278220 Rroxscaffold_4G00278240 Rroxscaffold_4G00278260 Rroxscaffold_4G00291120 Rroxscaffold_4G00291140 Rroxscaffold_4G00291150 Rroxscaffold_4G00291160 Rroxscaffold_4G00291180 Rroxscaffold_4G00291220 Rroxscaffold_4G00294350 Rroxscaffold_4G00304090 Rroxscaffold_4G00309820 Rroxscaffold_4G00314470 Rroxscaffold_6G00392280 Rroxscaffold_6G00399770 Rroxscaffold_6G00399780 Rroxscaffold_6G00399800 Rroxscaffold_6G00400110 Rroxscaffold_6G00400130 Rroxscaffold_6G00415240 Rroxscaffold_7G00183750 Rroxscaffold_7G00184040 Rroxscaffold_7G00184570 Rroxscaffold_7G00184580 Rroxscaffold_7G00192150 Rroxscaffold_7G00192460 Rroxscaffold_7G00196030 Rroxscaffold_7G00211080 Rroxscaffold_7G00214480 Rroxscaffold_7G00214490 Rroxscaffold_7G00214570 Rroxscaffold_7G00214580 Rroxscaffold_7G00214590 Rroxscaffold_7G00214610 Rroxscaffold_7G00214620 Rroxscaffold_7G00214790 Rroxscaffold_7G00216630 Rroxscaffold_7G00216640 Rroxscaffold_7G00216670 Rroxscaffold_7G00216680 Rroxscaffold_7G00216690 Rroxscaffold_7G00216730 Rroxscaffold_7G00216770 Rroxscaffold_7G00216780 Rroxscaffold_7G00216820 Rroxscaffold_7G00216830 Rroxscaffold_7G00217280 Rroxscaffold_7G00217310 Rroxscaffold_7G00217320 Rroxscaffold_7G00217330
rosa_rugosa Rorug01G0040400 Rorug01G0173300 Rorug01G0173400 Rorug01G0296100 Rorug01G0296200 Rorug01G0296300 Rorug01G0296400 Rorug01G0322300 Rorug01G0432900 Rorug01G0433100 Rorug01G0433200 Rorug01G0433500 Rorug02G0054900 Rorug02G0077900 Rorug02G0078000 Rorug02G0078100 Rorug02G0207300 Rorug02G0242200 Rorug02G0242300 Rorug03G0075500 Rorug03G0075500 Rorug03G0194300 Rorug05G0329100 Rorug05G0329300 Rorug05G0360000 Rorug05G0360000 Rorug05G0360300 Rorug05G0360400.1 Rorug05G0360500 Rorug05G0364200 Rorug05G0366200 Rorug05G0366300 Rorug05G0366400 Rorug05G0366600 Rorug05G0376400 Rorug05G0376500 Rorug05G0421100 Rorug05G0494600 Rorug05G0494800 Rorug05G0494900 Rorug05G0495100 Rorug05G0495200 Rorug05G0495900 Rorug05G0498200 Rorug05G0498200 Rorug05G0498300.1 Rorug05G0499100 Rorug05G0501700 Rorug05G0501800 Rorug05G0501900 Rorug05G0513800 Rorug05G0514100 Rorug05G0514200 Rorug05G0514200 Rorug05G0514500 Rorug05G0519200 Rorug05G0519300.1 Rorug05G0519400 Rorug05G0519400 Rorug05G0520600 Rorug05G0520700 Rorug05G0520800 Rorug05G0521300 Rorug05G0521400 Rorug05G0521500 Rorug05G0550800 Rorug06G0070400 Rorug06G0070500 Rorug06G0070600 Rorug06G0099500 Rorug06G0099600 Rorug06G0102100 Rorug06G0102200 Rorug06G0102300 Rorug06G0102300 Rorug06G0102400 Rorug06G0162500 Rorug06G0164500 Rorug06G0164600 Rorug06G0164800 Rorug06G0170600 Rorug07G0172900 Rorug07G0172900 Rorug07G0172900 Rorug07G0173000
rosa_samantha Rh1BG156400 Rh1BG156500 Rh1BG156600 Rh1BG292400 Rh1BG413500 Rh1BG413800 Rh1BG414100 Rh1BG414200 Rh1BG414400 Rh1CG059400 Rh1CG309000 Rh1CG428300 Rh1CG428400 Rh2BG129800 Rh2BG273700 Rh2CG131000 Rh2DG131300 Rh3AG245200 Rh3AG245600 Rh3BG139100 Rh3BG280400 Rh3BG280500 Rh3CG141200 Rh3CG149500 Rh3CG275400 Rh3CG275800 Rh3CG276500 Rh3CG276800 Rh3DG140400 Rh3DG272100 Rh3DG272300 Rh3DG272400 Rh3DG272700 Rh3DG272800 Rh3DG272900 Rh5AG099100 Rh5AG424200 Rh5AG435200 Rh5BG411900 Rh5BG439500 Rh5CG108000 Rh5CG436900 Rh5CG457800 Rh5CG462200 Rh5CG462300 Rh6AG033600 Rh6AG186700 Rh6BG190100 Rh6BG215300 Rh6BG217600 Rh6BG217800 Rh6CG188800 Rh6CG284800 Rh6DG003400 Rh6DG008400 Rh6DG008700 Rh6DG008800 Rh6DG009100 Rh6DG009400 Rh6DG025100 Rh6DG180300 Rh6DG209700 Rh6DG210100 Rh6DG272100 Rh6DG272300 Rh6DG273000 Rh7BG305400
rosa_wichuraiana Rw0G010970 Rw0G011460 Rw0G017090 Rw0G023140 Rw1G007890 Rw1G010200 Rw1G015630 Rw1G015640 Rw1G029350 Rw1G029370 Rw1G029380 Rw1G029390 Rw1G029400 Rw1G041290 Rw1G041560 Rw2G009760 Rw2G009770 Rw2G020640 Rw2G021670 Rw2G021690 Rw2G024060 Rw3G011380 Rw3G021890 Rw3G021910 Rw3G021940 Rw3G021950 Rw3G021960 Rw5G037070 Rw5G037080 Rw5G037090 Rw5G039330 Rw5G039890 Rw5G039900 Rw5G039920 Rw5G040740 Rw6G000500 Rw6G000510 Rw6G000520 Rw6G000550 Rw6G000570 Rw6G000580 Rw6G000610 Rw6G000820 Rw6G001070 Rw6G001090 Rw6G001100 Rw6G001170 Rw6G001180 Rw6G001260 Rw6G001270 Rw6G001280 Rw6G001300 Rw6G002450 Rw6G002470 Rw6G002500 Rw6G002830 Rw6G002870 Rw6G003000 Rw6G003080 Rw6G016110 Rw6G018400 Rw6G018590 Rw6G018610 Rw6G023840 Rw6G023880 Rw6G024250 Rw6G024260 Rw7G026620

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1068
AasI GACNNNNNNGTC 1 cut(s) 3968
Acc65I GGTACC 1 cut(s) 3403
AccB1I GGYRCC 2 cut(s) 2787, 3403
AccB7I CCANNNNNTGG 2 cut(s) 2192, 5537
AccI GTMKAC 4 cut(s) 1036, 1585, 1695, 4924
AccII CGCG 2 cut(s) 1572, 3490
AccIII TCCGGA 2 cut(s) 3130, 3706
AciI CCGC 8 cut(s) 103, 440, 2269, 2934, 3391, 3483, 5005, 5813
AclI AACGTT 2 cut(s) 3383, 4396
AcoI YGGCCR 2 cut(s) 480, 972
AcuI CTGAAG 6 cut(s) 24, 1752, 2366, 2642, 4685, 5714
AdeI CACNNNGTG 1 cut(s) 282
AflII CTTAAG 5 cut(s) 1871, 2141, 2282, 4628, 5567
AhlI ACTAGT 3 cut(s) 1039, 3356, 4087
AjnI CCWGG 7 cut(s) 278, 1282, 1544, 1579, 3058, 3137, 4918
AjuI GAANNNNNNNTTGG 8 cut(s) 408, 440, 975, 1007, 1768, 1800, 4333, 4365
AleI CACNNNNGTG 1 cut(s) 3605
Alw21I GWGCWC 7 cut(s) 183, 213, 531, 1915, 3432, 3894, 4470
Alw26I GTCTC 9 cut(s) 36, 1328, 1470, 1572, 1731, 2117, 2454, 2989, 4911
Ama87I CYCGRG 3 cut(s) 1023, 1639, 5662
Aor13HI TCCGGA 2 cut(s) 3130, 3706
AoxI GGCC 6 cut(s) 480, 972, 1237, 1542, 2278, 5623
ApeKI GCWGC 4 cut(s) 5, 451, 1590, 3197
ArsI GACNNNNNNTTYG 4 cut(s) 1650, 1682, 3891, 3923
Asp700I GAANNNNTTC 3 cut(s) 1350, 1554, 2983
Asp718I GGTACC 1 cut(s) 3403
AspA2I CCTAGG 1 cut(s) 56
AspLEI GCGC 3 cut(s) 221, 3490, 3722
AspS9I GGNCC 2 cut(s) 53, 1772
AsuC2I CCSGG 1 cut(s) 5921
AsuHPI GGTGA 4 cut(s) 104, 2036, 2511, 4033
AsuII TTCGAA 2 cut(s) 373, 3810
AvaI CYCGRG 3 cut(s) 1023, 1639, 5662
AvaII GGWCC 2 cut(s) 53, 1772
AvrII CCTAGG 1 cut(s) 56
AxyI CCTNAGG 1 cut(s) 4017
BaeI ACNNNNGTAYC 2 cut(s) 795, 828
BalI TGGCCA 1 cut(s) 482
BamHI GGATCC 1 cut(s) 3862
BanI GGYRCC 2 cut(s) 2787, 3403
BanII GRGCYC 8 cut(s) 25, 183, 213, 531, 3432, 3894, 4470, 5921
BauI CACGAG 2 cut(s) 2511, 4908
BbsI GAAGAC 6 cut(s) 102, 543, 713, 2315, 2756, 5660
Bbv12I GWGCWC 7 cut(s) 183, 213, 531, 1915, 3432, 3894, 4470
BbvI GCAGC 4 cut(s) 17, 463, 1602, 3209
BceAI ACGGC 2 cut(s) 586, 1578
BcgI CGANNNNNNTGC 4 cut(s) 557, 591, 1550, 1584
BciT130I CCWGG 7 cut(s) 280, 1284, 1546, 1581, 3060, 3139, 4920
BciVI GTATCC 2 cut(s) 1830, 5175
BclI TGATCA 1 cut(s) 4309
BcnI CCSGG 1 cut(s) 5921
BcoDI GTCTC 9 cut(s) 36, 1328, 1470, 1572, 1731, 2117, 2454, 2989, 4911
BcuI ACTAGT 3 cut(s) 1039, 3356, 4087
BfmI CTRYAG 1 cut(s) 3957
BfrI CTTAAG 5 cut(s) 1871, 2141, 2282, 4628, 5567
BfuI GTATCC 2 cut(s) 1830, 5175
BglI GCCNNNNNGGC 1 cut(s) 2277
BglII AGATCT 4 cut(s) 2812, 2897, 3804, 4346
BisI GCNGC 6 cut(s) 6, 452, 1591, 3198, 3391, 5813
BlnI CCTAGG 1 cut(s) 56
BlsI GCNGC 6 cut(s) 7, 453, 1592, 3199, 3392, 5814
BmcAI AGTACT 4 cut(s) 13, 2502, 3355, 3644
Bme1390I CCNGG 8 cut(s) 280, 1284, 1546, 1581, 3060, 3139, 4920, 5921
Bme18I GGWCC 2 cut(s) 53, 1772
BmeT110I CYCGRG 3 cut(s) 1023, 1639, 5662
BmgT120I GGNCC 2 cut(s) 53, 1772
BmiI GGNNCC 7 cut(s) 321, 886, 2789, 3405, 3864, 4249, 5925
BmrFI CCNGG 8 cut(s) 280, 1284, 1546, 1581, 3060, 3139, 4920, 5921
BmrI ACTGGG 1 cut(s) 4007
BmuI ACTGGG 1 cut(s) 4007
BpiI GAAGAC 6 cut(s) 102, 543, 713, 2315, 2756, 5660
BpmI CTGGAG 4 cut(s) 1085, 2365, 3623, 5657
Bpu10I CCTNAGC 1 cut(s) 651
Bpu14I TTCGAA 2 cut(s) 373, 3810
BpuEI CTTGAG 6 cut(s) 235, 3280, 4484, 4954, 5366, 5507
BpuMI CCSGG 1 cut(s) 5921
Bsa29I ATCGAT 2 cut(s) 1941, 2261
BsaBI GATNNNNATC 2 cut(s) 945, 4308
BsaJI CCNNGG 5 cut(s) 56, 1545, 3456, 3816, 5555
BsaWI WCCGGW 2 cut(s) 3130, 3706
BsaXI ACNNNNNCTCC 2 cut(s) 1270, 1300
Bse21I CCTNAGG 1 cut(s) 4017
Bse3DI GCAATG 4 cut(s) 461, 2052, 2161, 5397
Bse8I GATNNNNATC 2 cut(s) 945, 4308
BseAI TCCGGA 2 cut(s) 3130, 3706
BseBI CCWGG 7 cut(s) 280, 1284, 1546, 1581, 3060, 3139, 4920
BseCI ATCGAT 2 cut(s) 1941, 2261
BseDI CCNNGG 5 cut(s) 56, 1545, 3456, 3816, 5555
BseJI GATNNNNATC 2 cut(s) 945, 4308
BseMI GCAATG 4 cut(s) 461, 2052, 2161, 5397
BseMII CTCAG 9 cut(s) 29, 378, 665, 1857, 2927, 2984, 3873, 4008, 4661
BseRI GAGGAG 6 cut(s) 1291, 3117, 3512, 3590, 3593, 5792
BseXI GCAGC 4 cut(s) 17, 463, 1602, 3209
BseYI CCCAGC 1 cut(s) 5071
BsgI GTGCAG 2 cut(s) 470, 1017
Bsh1236I CGCG 2 cut(s) 1572, 3490
Bsh1285I CGRYCG 1 cut(s) 3456
BshFI GGCC 6 cut(s) 482, 974, 1239, 1544, 2280, 5625
BshNI GGYRCC 2 cut(s) 2787, 3403
BshVI ATCGAT 2 cut(s) 1941, 2261
BsiEI CGRYCG 1 cut(s) 3456
BsiHKAI GWGCWC 7 cut(s) 183, 213, 531, 1915, 3432, 3894, 4470
BsiHKCI CYCGRG 3 cut(s) 1023, 1639, 5662
BsiSI CCGG 4 cut(s) 975, 3131, 3707, 5921
BslFI GGGAC 8 cut(s) 1230, 2237, 2248, 2461, 4455, 4587, 5088, 5593
BsmAI GTCTC 9 cut(s) 36, 1328, 1470, 1572, 1731, 2117, 2454, 2989, 4911
BsmBI CGTCTC 2 cut(s) 36, 2989
BsmFI GGGAC 8 cut(s) 1230, 2237, 2248, 2461, 4455, 4587, 5088, 5593
BsmI GAATGC 3 cut(s) 317, 2596, 4486
BsnI GGCC 6 cut(s) 482, 974, 1239, 1544, 2280, 5625
BsoBI CYCGRG 3 cut(s) 1023, 1639, 5662
Bsp119I TTCGAA 2 cut(s) 373, 3810
Bsp1286I GDGCHC 9 cut(s) 25, 183, 213, 531, 1915, 3432, 3894, 4470, 5921
Bsp13I TCCGGA 2 cut(s) 3130, 3706
Bsp1407I TGTACA 3 cut(s) 2024, 2096, 5441
Bsp19I CCATGG 1 cut(s) 3816
Bsp68I TCGCGA 1 cut(s) 1572
BspACI CCGC 8 cut(s) 103, 440, 2269, 2934, 3391, 3483, 5005, 5813
BspANI GGCC 6 cut(s) 482, 974, 1239, 1544, 2280, 5625
BspCNI CTCAG 9 cut(s) 28, 377, 664, 1858, 2926, 2985, 3874, 4009, 4662
BspDI ATCGAT 2 cut(s) 1941, 2261
BspEI TCCGGA 2 cut(s) 3130, 3706
BspFNI CGCG 2 cut(s) 1572, 3490
BspLI GGNNCC 7 cut(s) 321, 886, 2789, 3405, 3864, 4249, 5925
BspMAI CTGCAG 1 cut(s) 3961
BspT104I TTCGAA 2 cut(s) 373, 3810
BspT107I GGYRCC 2 cut(s) 2787, 3403
BspTI CTTAAG 5 cut(s) 1871, 2141, 2282, 4628, 5567
BsrDI GCAATG 4 cut(s) 461, 2052, 2161, 5397
BsrGI TGTACA 3 cut(s) 2024, 2096, 5441
BssECI CCNNGG 5 cut(s) 56, 1545, 3456, 3816, 5555
BssSI CACGAG 2 cut(s) 2511, 4908
BssT1I CCWWGG 3 cut(s) 56, 3816, 5555
Bst2BI CACGAG 2 cut(s) 2511, 4908
Bst2UI CCWGG 7 cut(s) 280, 1284, 1546, 1581, 3060, 3139, 4920
Bst4CI ACNGT 7 cut(s) 1221, 1693, 2739, 2828, 3115, 4852, 5888
Bst6I CTCTTC 4 cut(s) 411, 1839, 4503, 4742
BstAFI CTTAAG 5 cut(s) 1871, 2141, 2282, 4628, 5567
BstAUI TGTACA 3 cut(s) 2024, 2096, 5441
BstBI TTCGAA 2 cut(s) 373, 3810
BstC8I GCNNGC 4 cut(s) 150, 1676, 3165, 3651
BstDSI CCRYGG 1 cut(s) 3816
BstFNI CGCG 2 cut(s) 1572, 3490
BstHHI GCGC 3 cut(s) 221, 3490, 3722
BstMAI GTCTC 9 cut(s) 36, 1328, 1470, 1572, 1731, 2117, 2454, 2989, 4911
BstMCI CGRYCG 1 cut(s) 3456
BstMWI GCNNNNNNNGC 7 cut(s) 145, 656, 1599, 1876, 2068, 2277, 3594
BstNI CCWGG 7 cut(s) 280, 1284, 1546, 1581, 3060, 3139, 4920
BstNSI RCATGY 2 cut(s) 1742, 4488
BstSCI CCNGG 8 cut(s) 278, 1282, 1544, 1579, 3058, 3137, 4918, 5919
BstSFI CTRYAG 1 cut(s) 3957
BstUI CGCG 2 cut(s) 1572, 3490
BstV1I GCAGC 4 cut(s) 17, 463, 1602, 3209
BstV2I GAAGAC 6 cut(s) 102, 543, 713, 2315, 2756, 5660
BstX2I RGATCY 9 cut(s) 2707, 2812, 2897, 3015, 3804, 3862, 4346, 5287, 5385
BstYI RGATCY 9 cut(s) 2707, 2812, 2897, 3015, 3804, 3862, 4346, 5287, 5385
Bsu15I ATCGAT 2 cut(s) 1941, 2261
Bsu36I CCTNAGG 1 cut(s) 4017
BsuI GTATCC 2 cut(s) 1830, 5175
BsuRI GGCC 6 cut(s) 482, 974, 1239, 1544, 2280, 5625
BsuTUI ATCGAT 2 cut(s) 1941, 2261
BtgI CCRYGG 1 cut(s) 3816
BtgZI GCGATG 2 cut(s) 1587, 3885
BtsIMutI CAGTG 4 cut(s) 2158, 3021, 4661, 5208
BtuMI TCGCGA 1 cut(s) 1572
Cac8I GCNNGC 4 cut(s) 150, 1676, 3165, 3651
CfoI GCGC 3 cut(s) 221, 3490, 3722
Cfr13I GGNCC 2 cut(s) 53, 1772
ClaI ATCGAT 2 cut(s) 1941, 2261
CseI GACGC 6 cut(s) 18, 1596, 3920, 4584, 4935, 5687
CsiI ACCWGGT 3 cut(s) 278, 1579, 4918
DraI TTTAAA 1 cut(s) 2604
DraIII CACNNNGTG 1 cut(s) 282
DrdI GACNNNNNNGTC 1 cut(s) 3968
DseDI GACNNNNNNGTC 1 cut(s) 3968
EaeI YGGCCR 2 cut(s) 480, 972
Eam1104I CTCTTC 4 cut(s) 411, 1839, 4503, 4742
EarI CTCTTC 4 cut(s) 411, 1839, 4503, 4742
EciI GGCGGA 1 cut(s) 2923
Ecl136II GAGCTC 6 cut(s) 181, 211, 529, 3430, 3892, 4468
Eco130I CCWWGG 3 cut(s) 56, 3816, 5555
Eco24I GRGCYC 8 cut(s) 25, 183, 213, 531, 3432, 3894, 4470, 5921
Eco32I GATATC 1 cut(s) 2368
Eco47I GGWCC 2 cut(s) 53, 1772
Eco53kI GAGCTC 6 cut(s) 181, 211, 529, 3430, 3892, 4468
Eco57I CTGAAG 6 cut(s) 24, 1752, 2366, 2642, 4685, 5714
Eco81I CCTNAGG 1 cut(s) 4017
Eco88I CYCGRG 3 cut(s) 1023, 1639, 5662
EcoICRI GAGCTC 6 cut(s) 181, 211, 529, 3430, 3892, 4468
EcoO109I RGGNCCY 1 cut(s) 53
EcoRI GAATTC 1 cut(s) 5296
EcoRII CCWGG 7 cut(s) 278, 1282, 1544, 1579, 3058, 3137, 4918
EcoRV GATATC 1 cut(s) 2368
EcoT14I CCWWGG 3 cut(s) 56, 3816, 5555
EcoT22I ATGCAT 5 cut(s) 317, 414, 1524, 4486, 5003
EcoT38I GRGCYC 8 cut(s) 25, 183, 213, 531, 3432, 3894, 4470, 5921
ErhI CCWWGG 3 cut(s) 56, 3816, 5555
Esp3I CGTCTC 2 cut(s) 36, 2989
FalI AAGNNNNNCTT 6 cut(s) 2150, 2182, 2265, 2297, 2339, 2371
FaqI GGGAC 8 cut(s) 1230, 2237, 2248, 2461, 4455, 4587, 5088, 5593
FauI CCCGC 2 cut(s) 110, 3476
FbaI TGATCA 1 cut(s) 4309
FblI GTMKAC 4 cut(s) 1036, 1585, 1695, 4924
Fnu4HI GCNGC 6 cut(s) 6, 452, 1591, 3198, 3391, 5813
FriOI GRGCYC 8 cut(s) 25, 183, 213, 531, 3432, 3894, 4470, 5921
Fsp4HI GCNGC 6 cut(s) 6, 452, 1591, 3198, 3391, 5813
GlaI GCGC 3 cut(s) 220, 3489, 3721
GluI GCNGC 6 cut(s) 6, 452, 1591, 3198, 3391, 5813
GsaI CCCAGC 1 cut(s) 5075
GsuI CTGGAG 4 cut(s) 1085, 2365, 3623, 5657
HaeIII GGCC 6 cut(s) 482, 974, 1239, 1544, 2280, 5625
HapII CCGG 4 cut(s) 975, 3131, 3707, 5921
HgaI GACGC 6 cut(s) 18, 1596, 3920, 4584, 4935, 5687
HhaI GCGC 3 cut(s) 221, 3490, 3722
Hin6I GCGC 3 cut(s) 219, 3488, 3720
HinP1I GCGC 3 cut(s) 219, 3488, 3720
HincII GTYRAC 3 cut(s) 1586, 4318, 4925
HindII GTYRAC 3 cut(s) 1586, 4318, 4925
HindIII AAGCTT 2 cut(s) 4625, 5879
HpaI GTTAAC 1 cut(s) 4318
HpaII CCGG 4 cut(s) 975, 3131, 3707, 5921
HphI GGTGA 4 cut(s) 104, 2036, 2511, 4033
Hpy99I CGWCG 3 cut(s) 1590, 3908, 4929
HpyCH4III ACNGT 7 cut(s) 1221, 1693, 2739, 2828, 3115, 4852, 5888
HpyCH4IV ACGT 9 cut(s) 637, 1033, 1512, 3086, 3179, 3363, 3383, 4314, 4396
HpyF10VI GCNNNNNNNGC 7 cut(s) 145, 656, 1599, 1876, 2068, 2277, 3594
HpySE526I ACGT 9 cut(s) 637, 1033, 1512, 3086, 3179, 3363, 3383, 4314, 4396
HspAI GCGC 3 cut(s) 219, 3488, 3720
Kpn2I TCCGGA 2 cut(s) 3130, 3706
KpnI GGTACC 1 cut(s) 3407
Ksp22I TGATCA 1 cut(s) 4309
KspAI GTTAAC 1 cut(s) 4318
Lsp1109I GCAGC 4 cut(s) 17, 463, 1602, 3209
MabI ACCWGGT 3 cut(s) 278, 1579, 4918
MaeII ACGT 9 cut(s) 637, 1033, 1512, 3086, 3179, 3363, 3383, 4314, 4396
MaeIII GTNAC 8 cut(s) 1316, 2728, 3359, 3569, 3948, 4378, 4778, 5326
MfeI CAATTG 5 cut(s) 1850, 2702, 2938, 4520, 4833
MflI RGATCY 9 cut(s) 2707, 2812, 2897, 3015, 3804, 3862, 4346, 5287, 5385
MhlI GDGCHC 9 cut(s) 25, 183, 213, 531, 1915, 3432, 3894, 4470, 5921
MlsI TGGCCA 1 cut(s) 482
MluNI TGGCCA 1 cut(s) 482
MlyI GAGTC 8 cut(s) 1017, 1288, 1574, 2119, 3590, 4913, 5030, 5674
MmeI TCCRAC 4 cut(s) 1989, 3768, 3952, 5218
Mox20I TGGCCA 1 cut(s) 482
Mph1103I ATGCAT 5 cut(s) 317, 414, 1524, 4486, 5003
MroI TCCGGA 2 cut(s) 3130, 3706
MroXI GAANNNNTTC 3 cut(s) 1350, 1554, 2983
MscI TGGCCA 1 cut(s) 482
MslI CAYNNNNRTG 3 cut(s) 2841, 3151, 3605
Msp20I TGGCCA 1 cut(s) 482
MspA1I CMGCKG 1 cut(s) 44
MspCI CTTAAG 5 cut(s) 1871, 2141, 2282, 4628, 5567
MspI CCGG 4 cut(s) 975, 3131, 3707, 5921
MspR9I CCNGG 8 cut(s) 280, 1284, 1546, 1581, 3060, 3139, 4920, 5921
MunI CAATTG 5 cut(s) 1850, 2702, 2938, 4520, 4833
Mva1269I GAATGC 3 cut(s) 317, 2596, 4486
MvaI CCWGG 7 cut(s) 280, 1284, 1546, 1581, 3060, 3139, 4920
MvnI CGCG 2 cut(s) 1572, 3490
MwoI GCNNNNNNNGC 7 cut(s) 145, 656, 1599, 1876, 2068, 2277, 3594
NciI CCSGG 1 cut(s) 5921
NcoI CCATGG 1 cut(s) 3816
NlaIV GGNNCC 7 cut(s) 321, 886, 2789, 3405, 3864, 4249, 5925
NmeAIII GCCGAG 2 cut(s) 348, 1265
NmuCI GTSAC 5 cut(s) 3359, 3569, 3948, 4778, 5326
NruI TCGCGA 1 cut(s) 1572
NsiI ATGCAT 5 cut(s) 317, 414, 1524, 4486, 5003
NspI RCATGY 2 cut(s) 1742, 4488
NspV TTCGAA 2 cut(s) 373, 3810
OliI CACNNNNGTG 1 cut(s) 3605
PaeR7I CTCGAG 2 cut(s) 1023, 5662
PcsI WCGNNNNNNNCGW 4 cut(s) 1030, 1591, 4906, 4930
PctI GAATGC 3 cut(s) 317, 2596, 4486
PdmI GAANNNNTTC 3 cut(s) 1350, 1554, 2983
PflFI GACNNNGTC 1 cut(s) 4929
PflMI CCANNNNNTGG 2 cut(s) 2192, 5537
PfoI TCCNGGA 2 cut(s) 3058, 3137
PkrI GCNGC 6 cut(s) 7, 453, 1592, 3199, 3392, 5814
PleI GAGTC 8 cut(s) 1016, 1287, 1573, 2118, 3589, 4912, 5030, 5673
PpsI GAGTC 8 cut(s) 1016, 1287, 1573, 2118, 3589, 4912, 5030, 5673
PpuMI RGGWCCY 1 cut(s) 53
PsiI TTATAA 1 cut(s) 1068
Psp124BI GAGCTC 6 cut(s) 183, 213, 531, 3432, 3894, 4470
Psp1406I AACGTT 2 cut(s) 3383, 4396
Psp5II RGGWCCY 1 cut(s) 53
Psp6I CCWGG 7 cut(s) 278, 1282, 1544, 1579, 3058, 3137, 4918
PspFI CCCAGC 1 cut(s) 5071
PspGI CCWGG 7 cut(s) 278, 1282, 1544, 1579, 3058, 3137, 4918
PspN4I GGNNCC 7 cut(s) 321, 886, 2789, 3405, 3864, 4249, 5925
PspPI GGNCC 2 cut(s) 53, 1772
PspPPI RGGWCCY 1 cut(s) 53
PstI CTGCAG 1 cut(s) 3961
PsuI RGATCY 9 cut(s) 2707, 2812, 2897, 3015, 3804, 3862, 4346, 5287, 5385
PsyI GACNNNGTC 1 cut(s) 4929
PvuII CAGCTG 1 cut(s) 44
RruI TCGCGA 1 cut(s) 1572
RseI CAYNNNNRTG 3 cut(s) 2841, 3151, 3605
SacI GAGCTC 6 cut(s) 183, 213, 531, 3432, 3894, 4470
SalI GTCGAC 2 cut(s) 1584, 4923
SatI GCNGC 6 cut(s) 6, 452, 1591, 3198, 3391, 5813
Sau96I GGNCC 2 cut(s) 53, 1772
ScaI AGTACT 4 cut(s) 13, 2502, 3355, 3644
SchI GAGTC 8 cut(s) 1017, 1288, 1574, 2119, 3590, 4913, 5030, 5674
ScrFI CCNGG 8 cut(s) 280, 1284, 1546, 1581, 3060, 3139, 4920, 5921
SduI GDGCHC 9 cut(s) 25, 183, 213, 531, 1915, 3432, 3894, 4470, 5921
SexAI ACCWGGT 3 cut(s) 278, 1579, 4918
SfcI CTRYAG 1 cut(s) 3957
Sfr274I CTCGAG 2 cut(s) 1023, 5662
SfuI TTCGAA 2 cut(s) 373, 3810
SinI GGWCC 2 cut(s) 53, 1772
SlaI CTCGAG 2 cut(s) 1023, 5662
SmiMI CAYNNNNRTG 3 cut(s) 2841, 3151, 3605
SpeI ACTAGT 3 cut(s) 1039, 3356, 4087
SsiI CCGC 8 cut(s) 103, 440, 2269, 2934, 3391, 3483, 5005, 5813
SspI AATATT 7 cut(s) 345, 843, 1999, 2650, 2982, 3566, 4219
SstI GAGCTC 6 cut(s) 183, 213, 531, 3432, 3894, 4470
StyD4I CCNGG 8 cut(s) 278, 1282, 1544, 1579, 3058, 3137, 4918, 5919
StyI CCWWGG 3 cut(s) 56, 3816, 5555
TaaI ACNGT 7 cut(s) 1221, 1693, 2739, 2828, 3115, 4852, 5888
TaiI ACGT 9 cut(s) 640, 1036, 1515, 3089, 3182, 3366, 3386, 4317, 4399
TaqII GACCGA 2 cut(s) 189, 3470
TatI WGTACW 8 cut(s) 11, 2024, 2096, 2500, 3353, 3642, 5369, 5441
TauI GCSGC 2 cut(s) 3393, 5815
TscAI CASTG 4 cut(s) 2158, 3028, 4668, 5215
TseFI GTSAC 5 cut(s) 3359, 3569, 3948, 4778, 5326
TseI GCWGC 4 cut(s) 5, 451, 1590, 3197
Tsp45I GTSAC 5 cut(s) 3359, 3569, 3948, 4778, 5326
TspGWI ACGGA 6 cut(s) 1185, 1625, 1827, 2135, 2215, 3543
TspRI CASTG 4 cut(s) 2158, 3028, 4668, 5215
Tth111I GACNNNGTC 1 cut(s) 4929
Van91I CCANNNNNTGG 2 cut(s) 2192, 5537
Vha464I CTTAAG 5 cut(s) 1871, 2141, 2282, 4628, 5567
VpaK11BI GGWCC 2 cut(s) 53, 1772
XbaI TCTAGA 2 cut(s) 205, 2296
XceI RCATGY 2 cut(s) 1742, 4488
XcmI CCANNNNNNNNNTGG 2 cut(s) 283, 721
XhoI CTCGAG 2 cut(s) 1023, 5662
XmaJI CCTAGG 1 cut(s) 56
XmiI GTMKAC 4 cut(s) 1036, 1585, 1695, 4924
XmnI GAANNNNTTC 3 cut(s) 1350, 1554, 2983
ZrmI AGTACT 4 cut(s) 13, 2502, 3355, 3644
Zsp2I ATGCAT 5 cut(s) 317, 414, 1524, 4486, 5003
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.