TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 18 - 198 | 1.7e-53 | TIR domain |
| TIR_2 | PF13676 | 21 - 117 | 1.7e-16 | TIR domain |
| NB-ARC | PF00931 | 201 - 370 | 4.7e-21 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 438 - 509 | 2.7e-13 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 739 - 873 | 2.6e-07 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 767 - 956 | 4.6e-09 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 862 - 931 | 2e-07 | Leucine-rich repeat region |
| C-JID | PF20160 | 1007 - 1151 | 1.6e-08 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 2 cut(s) | 1934, 3343 |
| AccI | GTMKAC | 1 cut(s) | 1477 |
| AccII | CGCG | 1 cut(s) | 3427 |
| AciI | CCGC | 4 cut(s) | 774, 1351, 2971, 3582 |
| AclWI | GGATC | 3 cut(s) | 933, 2858, 3182 |
| AcuI | CTGAAG | 7 cut(s) | 58, 402, 1712, 2202, 2422, 2492, 2642 |
| AcyI | GRCGYC | 1 cut(s) | 482 |
| AdeI | CACNNNGTG | 1 cut(s) | 267 |
| AfaI | GTAC | 6 cut(s) | 840, 1258, 2191, 2687, 2842, 3144 |
| AfeI | AGCGCT | 1 cut(s) | 2435 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 2876, 3095 |
| AflIII | ACRYGT | 1 cut(s) | 60 |
| AgeI | ACCGGT | 1 cut(s) | 32 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 3157 |
| AhlI | ACTAGT | 1 cut(s) | 706 |
| AjiI | CACGTC | 1 cut(s) | 61 |
| AjnI | CCWGG | 6 cut(s) | 218, 948, 1537, 1798, 1878, 3022 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 238, 270, 1223, 1255 |
| Alw21I | GWGCWC | 5 cut(s) | 14, 198, 2924, 3136, 3433 |
| Alw26I | GTCTC | 8 cut(s) | 352, 354, 563, 2020, 2043, 2075, 2282, 3060 |
| Alw44I | GTGCAC | 1 cut(s) | 3429 |
| AlwI | GGATC | 3 cut(s) | 933, 2858, 3182 |
| Ama87I | CYCGRG | 1 cut(s) | 3378 |
| Aor51HI | AGCGCT | 1 cut(s) | 2435 |
| AoxI | GGCC | 4 cut(s) | 3, 1729, 2177, 3301 |
| ApaLI | GTGCAC | 1 cut(s) | 3429 |
| ApeKI | GCWGC | 7 cut(s) | 372, 1081, 1696, 2121, 2328, 2488, 3486 |
| AsiGI | ACCGGT | 1 cut(s) | 32 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1512, 2856 |
| AspLEI | GCGC | 2 cut(s) | 2436, 3427 |
| AspS9I | GGNCC | 4 cut(s) | 1730, 1929, 2177, 3175 |
| AsuC2I | CCSGG | 1 cut(s) | 1934 |
| AsuHPI | GGTGA | 4 cut(s) | 1847, 2552, 3272, 3421 |
| AsuII | TTCGAA | 1 cut(s) | 3369 |
| AvaI | CYCGRG | 1 cut(s) | 3378 |
| AvaII | GGWCC | 2 cut(s) | 1929, 3175 |
| AxyI | CCTNAGG | 1 cut(s) | 3171 |
| BaeGI | GKGCMC | 1 cut(s) | 3433 |
| BanII | GRGCYC | 1 cut(s) | 198 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 822, 854, 1685, 1717 |
| BauI | CACGAG | 1 cut(s) | 2917 |
| BbsI | GAAGAC | 6 cut(s) | 90, 1163, 1733, 2592, 2667, 3571 |
| Bbv12I | GWGCWC | 5 cut(s) | 14, 198, 2924, 3136, 3433 |
| BbvI | GCAGC | 7 cut(s) | 384, 1093, 1683, 2108, 2315, 2475, 3498 |
| BccI | CCATC | 6 cut(s) | 191, 667, 1295, 2014, 2221, 3210 |
| BceAI | ACGGC | 3 cut(s) | 331, 3149, 3288 |
| BciT130I | CCWGG | 6 cut(s) | 220, 950, 1539, 1800, 1880, 3024 |
| BciVI | GTATCC | 2 cut(s) | 1788, 3218 |
| BclI | TGATCA | 1 cut(s) | 1852 |
| BcnI | CCSGG | 1 cut(s) | 1934 |
| BcoDI | GTCTC | 8 cut(s) | 352, 354, 563, 2020, 2043, 2075, 2282, 3060 |
| BcuI | ACTAGT | 1 cut(s) | 706 |
| BfmI | CTRYAG | 4 cut(s) | 1079, 1914, 3384, 3615 |
| BfoI | RGCGCY | 1 cut(s) | 2437 |
| BfuAI | ACCTGC | 2 cut(s) | 1934, 3343 |
| BfuI | GTATCC | 2 cut(s) | 1788, 3218 |
| BisI | GCNGC | 7 cut(s) | 373, 1082, 1697, 2122, 2329, 2489, 3487 |
| BlsI | GCNGC | 7 cut(s) | 374, 1083, 1698, 2123, 2330, 2490, 3488 |
| BmcAI | AGTACT | 2 cut(s) | 1258, 2687 |
| Bme1390I | CCNGG | 7 cut(s) | 220, 950, 1539, 1800, 1880, 1934, 3024 |
| Bme18I | GGWCC | 2 cut(s) | 1929, 3175 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 3157 |
| BmeT110I | CYCGRG | 1 cut(s) | 3378 |
| BmgBI | CACGTC | 1 cut(s) | 61 |
| BmgT120I | GGNCC | 4 cut(s) | 1730, 1929, 2177, 3175 |
| BmiI | GGNNCC | 5 cut(s) | 345, 574, 1732, 1931, 3177 |
| BmrFI | CCNGG | 7 cut(s) | 220, 950, 1539, 1800, 1880, 1934, 3024 |
| BmsI | GCATC | 4 cut(s) | 436, 559, 753, 3389 |
| BpiI | GAAGAC | 6 cut(s) | 90, 1163, 1733, 2592, 2667, 3571 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 707, 739, 1708, 1740 |
| BpmI | CTGGAG | 3 cut(s) | 1185, 2853, 2999 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1177 |
| Bpu14I | TTCGAA | 1 cut(s) | 3369 |
| BpuEI | CTTGAG | 7 cut(s) | 28, 1774, 1942, 2006, 2186, 2317, 2608 |
| BpuMI | CCSGG | 1 cut(s) | 1934 |
| Bsa29I | ATCGAT | 1 cut(s) | 1899 |
| BsaBI | GATNNNNATC | 3 cut(s) | 924, 1659, 2208 |
| BsaHI | GRCGYC | 1 cut(s) | 482 |
| BsaJI | CCNNGG | 6 cut(s) | 47, 781, 948, 1879, 1932, 2546 |
| BsaWI | WCCGGW | 2 cut(s) | 32, 1810 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 3057, 3087 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 2876, 3095 |
| Bse118I | RCCGGY | 1 cut(s) | 32 |
| Bse1I | ACTGG | 1 cut(s) | 945 |
| Bse21I | CCTNAGG | 1 cut(s) | 3171 |
| Bse3DI | GCAATG | 3 cut(s) | 1338, 2010, 2217 |
| Bse8I | GATNNNNATC | 3 cut(s) | 924, 1659, 2208 |
| BseBI | CCWGG | 6 cut(s) | 220, 950, 1539, 1800, 1880, 3024 |
| BseCI | ATCGAT | 1 cut(s) | 1899 |
| BseDI | CCNNGG | 6 cut(s) | 47, 781, 948, 1879, 1932, 2546 |
| BseJI | GATNNNNATC | 3 cut(s) | 924, 1659, 2208 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 2876, 3095 |
| BseMI | GCAATG | 3 cut(s) | 1338, 2010, 2217 |
| BseMII | CTCAG | 7 cut(s) | 203, 591, 2533, 2650, 3092, 3162, 3335 |
| BseNI | ACTGG | 1 cut(s) | 945 |
| BseRI | GAGGAG | 3 cut(s) | 188, 994, 2468 |
| BseSI | GKGCMC | 1 cut(s) | 3433 |
| BseXI | GCAGC | 7 cut(s) | 384, 1093, 1683, 2108, 2315, 2475, 3498 |
| BseYI | CCCAGC | 1 cut(s) | 473 |
| Bsh1236I | CGCG | 1 cut(s) | 3427 |
| Bsh1285I | CGRYCG | 2 cut(s) | 231, 2928 |
| BshFI | GGCC | 4 cut(s) | 5, 1731, 2179, 3303 |
| BshTI | ACCGGT | 1 cut(s) | 32 |
| BshVI | ATCGAT | 1 cut(s) | 1899 |
| BsiEI | CGRYCG | 2 cut(s) | 231, 2928 |
| BsiHKAI | GWGCWC | 5 cut(s) | 14, 198, 2924, 3136, 3433 |
| BsiHKCI | CYCGRG | 1 cut(s) | 3378 |
| BsiSI | CCGG | 3 cut(s) | 33, 1811, 1934 |
| BslFI | GGGAC | 3 cut(s) | 167, 969, 2413 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 2876, 3095 |
| BsmAI | GTCTC | 8 cut(s) | 352, 354, 563, 2020, 2043, 2075, 2282, 3060 |
| BsmBI | CGTCTC | 1 cut(s) | 354 |
| BsmFI | GGGAC | 3 cut(s) | 167, 969, 2413 |
| BsmI | GAATGC | 2 cut(s) | 302, 2730 |
| BsnI | GGCC | 4 cut(s) | 5, 1731, 2179, 3303 |
| BsoBI | CYCGRG | 1 cut(s) | 3378 |
| Bsp119I | TTCGAA | 1 cut(s) | 3369 |
| Bsp1286I | GDGCHC | 5 cut(s) | 14, 198, 2924, 3136, 3433 |
| Bsp1407I | TGTACA | 1 cut(s) | 838 |
| Bsp143I | GATC | 9 cut(s) | 106, 228, 925, 1852, 1900, 2828, 2863, 3187, 3277 |
| Bsp19I | CCATGG | 1 cut(s) | 47 |
| BspACI | CCGC | 4 cut(s) | 774, 1351, 2971, 3582 |
| BspANI | GGCC | 4 cut(s) | 5, 1731, 2179, 3303 |
| BspCNI | CTCAG | 7 cut(s) | 202, 590, 2532, 2649, 3091, 3163, 3334 |
| BspDI | ATCGAT | 1 cut(s) | 1899 |
| BspFNI | CGCG | 1 cut(s) | 3427 |
| BspLI | GGNNCC | 5 cut(s) | 345, 574, 1732, 1931, 3177 |
| BspMAI | CTGCAG | 2 cut(s) | 1083, 3619 |
| BspMI | ACCTGC | 2 cut(s) | 1934, 3343 |
| BspPI | GGATC | 3 cut(s) | 933, 2858, 3182 |
| BspQI | GCTCTTC | 2 cut(s) | 1527, 3447 |
| BspT104I | TTCGAA | 1 cut(s) | 3369 |
| BsrDI | GCAATG | 3 cut(s) | 1338, 2010, 2217 |
| BsrFI | RCCGGY | 1 cut(s) | 32 |
| BsrGI | TGTACA | 1 cut(s) | 838 |
| BsrI | ACTGG | 1 cut(s) | 945 |
| BssAI | RCCGGY | 1 cut(s) | 32 |
| BssECI | CCNNGG | 6 cut(s) | 47, 781, 948, 1879, 1932, 2546 |
| BssMI | GATC | 9 cut(s) | 106, 228, 925, 1852, 1900, 2828, 2863, 3187, 3277 |
| BssNAI | GTATAC | 1 cut(s) | 1478 |
| BssNI | GRCGYC | 1 cut(s) | 482 |
| BssSI | CACGAG | 1 cut(s) | 2917 |
| BssT1I | CCWWGG | 2 cut(s) | 47, 2546 |
| Bst1107I | GTATAC | 1 cut(s) | 1478 |
| Bst2BI | CACGAG | 1 cut(s) | 2917 |
| Bst2UI | CCWGG | 6 cut(s) | 220, 950, 1539, 1800, 1880, 3024 |
| Bst4CI | ACNGT | 8 cut(s) | 785, 1140, 1273, 1965, 2498, 2630, 2926, 3259 |
| Bst6I | CTCTTC | 4 cut(s) | 1527, 1641, 2546, 3447 |
| BstACI | GRCGYC | 1 cut(s) | 482 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2913 |
| BstAUI | TGTACA | 1 cut(s) | 838 |
| BstBI | TTCGAA | 1 cut(s) | 3369 |
| BstC8I | GCNNGC | 3 cut(s) | 272, 1355, 3429 |
| BstDSI | CCRYGG | 2 cut(s) | 47, 781 |
| BstFNI | CGCG | 1 cut(s) | 3427 |
| BstH2I | RGCGCY | 1 cut(s) | 2437 |
| BstHHI | GCGC | 2 cut(s) | 2436, 3427 |
| BstKTI | GATC | 9 cut(s) | 109, 231, 928, 1855, 1903, 2831, 2866, 3190, 3280 |
| BstMAI | GTCTC | 8 cut(s) | 352, 354, 563, 2020, 2043, 2075, 2282, 3060 |
| BstMBI | GATC | 9 cut(s) | 106, 228, 925, 1852, 1900, 2828, 2863, 3187, 3277 |
| BstMCI | CGRYCG | 2 cut(s) | 231, 2928 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 78, 470, 479, 2746, 2913, 3131 |
| BstNI | CCWGG | 6 cut(s) | 220, 950, 1539, 1800, 1880, 3024 |
| BstNSI | RCATGY | 2 cut(s) | 1226, 1347 |
| BstSCI | CCNGG | 7 cut(s) | 218, 948, 1537, 1798, 1878, 1932, 3022 |
| BstSFI | CTRYAG | 4 cut(s) | 1079, 1914, 3384, 3615 |
| BstSLI | GKGCMC | 1 cut(s) | 3433 |
| BstUI | CGCG | 1 cut(s) | 3427 |
| BstV1I | GCAGC | 7 cut(s) | 384, 1093, 1683, 2108, 2315, 2475, 3498 |
| BstV2I | GAAGAC | 6 cut(s) | 90, 1163, 1733, 2592, 2667, 3571 |
| BstX2I | RGATCY | 2 cut(s) | 2863, 3187 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1227 |
| BstYI | RGATCY | 2 cut(s) | 2863, 3187 |
| BstZ17I | GTATAC | 1 cut(s) | 1478 |
| Bsu15I | ATCGAT | 1 cut(s) | 1899 |
| Bsu36I | CCTNAGG | 1 cut(s) | 3171 |
| BsuI | GTATCC | 2 cut(s) | 1788, 3218 |
| BsuRI | GGCC | 4 cut(s) | 5, 1731, 2179, 3303 |
| BsuTUI | ATCGAT | 1 cut(s) | 1899 |
| BtgI | CCRYGG | 2 cut(s) | 47, 781 |
| BtrI | CACGTC | 1 cut(s) | 61 |
| BtsI | GCAGTG | 2 cut(s) | 134, 201 |
| BtsIMutI | CAGTG | 5 cut(s) | 134, 201, 2446, 2644, 2967 |
| BveI | ACCTGC | 2 cut(s) | 1934, 3343 |
| Cac8I | GCNNGC | 3 cut(s) | 272, 1355, 3429 |
| CfoI | GCGC | 2 cut(s) | 2436, 3427 |
| Cfr10I | RCCGGY | 1 cut(s) | 32 |
| Cfr13I | GGNCC | 4 cut(s) | 1730, 1929, 2177, 3175 |
| ClaI | ATCGAT | 1 cut(s) | 1899 |
| CseI | GACGC | 2 cut(s) | 471, 1554 |
| CsiI | ACCWGGT | 1 cut(s) | 1798 |
| Csp6I | GTAC | 6 cut(s) | 839, 1257, 2190, 2686, 2841, 3143 |
| CspAI | ACCGGT | 1 cut(s) | 32 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 518, 553 |
| CviQI | GTAC | 6 cut(s) | 839, 1257, 2190, 2686, 2841, 3143 |
| DpnI | GATC | 9 cut(s) | 108, 230, 927, 1854, 1902, 2830, 2865, 3189, 3279 |
| DpnII | GATC | 9 cut(s) | 106, 228, 925, 1852, 1900, 2828, 2863, 3187, 3277 |
| DraIII | CACNNNGTG | 1 cut(s) | 267 |
| DriI | GACNNNNNGTC | 1 cut(s) | 3157 |
| Eam1104I | CTCTTC | 4 cut(s) | 1527, 1641, 2546, 3447 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 3157 |
| EarI | CTCTTC | 4 cut(s) | 1527, 1641, 2546, 3447 |
| Ecl136II | GAGCTC | 1 cut(s) | 196 |
| Eco130I | CCWWGG | 2 cut(s) | 47, 2546 |
| Eco24I | GRGCYC | 1 cut(s) | 198 |
| Eco47I | GGWCC | 2 cut(s) | 1929, 3175 |
| Eco47III | AGCGCT | 1 cut(s) | 2435 |
| Eco53kI | GAGCTC | 1 cut(s) | 196 |
| Eco57I | CTGAAG | 7 cut(s) | 58, 402, 1712, 2202, 2422, 2492, 2642 |
| Eco81I | CCTNAGG | 1 cut(s) | 3171 |
| Eco88I | CYCGRG | 1 cut(s) | 3378 |
| EcoICRI | GAGCTC | 1 cut(s) | 196 |
| EcoO109I | RGGNCCY | 3 cut(s) | 1929, 2177, 3175 |
| EcoRI | GAATTC | 1 cut(s) | 1231 |
| EcoRII | CCWGG | 6 cut(s) | 218, 948, 1537, 1798, 1878, 3022 |
| EcoT14I | CCWWGG | 2 cut(s) | 47, 2546 |
| EcoT22I | ATGCAT | 3 cut(s) | 302, 1228, 3404 |
| EcoT38I | GRGCYC | 1 cut(s) | 198 |
| ErhI | CCWWGG | 2 cut(s) | 47, 2546 |
| Esp3I | CGTCTC | 1 cut(s) | 354 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 888, 920, 3350, 3382 |
| FaqI | GGGAC | 3 cut(s) | 167, 969, 2413 |
| FauNDI | CATATG | 2 cut(s) | 1045, 3535 |
| FbaI | TGATCA | 1 cut(s) | 1852 |
| FblI | GTMKAC | 1 cut(s) | 1477 |
| Fnu4HI | GCNGC | 7 cut(s) | 373, 1082, 1697, 2122, 2329, 2489, 3487 |
| FriOI | GRGCYC | 1 cut(s) | 198 |
| Fsp4HI | GCNGC | 7 cut(s) | 373, 1082, 1697, 2122, 2329, 2489, 3487 |
| GlaI | GCGC | 2 cut(s) | 2435, 3426 |
| GluI | GCNGC | 7 cut(s) | 373, 1082, 1697, 2122, 2329, 2489, 3487 |
| GsaI | CCCAGC | 1 cut(s) | 477 |
| GsuI | CTGGAG | 3 cut(s) | 1185, 2853, 2999 |
| HaeII | RGCGCY | 1 cut(s) | 2437 |
| HaeIII | GGCC | 4 cut(s) | 5, 1731, 2179, 3303 |
| HapII | CCGG | 3 cut(s) | 33, 1811, 1934 |
| HgaI | GACGC | 2 cut(s) | 471, 1554 |
| HhaI | GCGC | 2 cut(s) | 2436, 3427 |
| Hin1I | GRCGYC | 1 cut(s) | 482 |
| Hin6I | GCGC | 2 cut(s) | 2434, 3425 |
| HinP1I | GCGC | 2 cut(s) | 2434, 3425 |
| HindIII | AAGCTT | 2 cut(s) | 605, 2384 |
| HpaII | CCGG | 3 cut(s) | 33, 1811, 1934 |
| HphI | GGTGA | 4 cut(s) | 1847, 2552, 3272, 3421 |
| Hpy166II | GTNNAC | 5 cut(s) | 1220, 1478, 1544, 1688, 3431 |
| Hpy8I | GTNNAC | 5 cut(s) | 1220, 1478, 1544, 1688, 3431 |
| Hpy99I | CGWCG | 2 cut(s) | 62, 3605 |
| HpyCH4III | ACNGT | 8 cut(s) | 785, 1140, 1273, 1965, 2498, 2630, 2926, 3259 |
| HpyCH4IV | ACGT | 1 cut(s) | 60 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 78, 470, 479, 2746, 2913, 3131 |
| HpySE526I | ACGT | 1 cut(s) | 60 |
| Hsp92I | GRCGYC | 1 cut(s) | 482 |
| HspAI | GCGC | 2 cut(s) | 2434, 3425 |
| Ksp22I | TGATCA | 1 cut(s) | 1852 |
| Kzo9I | GATC | 9 cut(s) | 106, 228, 925, 1852, 1900, 2828, 2863, 3187, 3277 |
| LguI | GCTCTTC | 2 cut(s) | 1527, 3447 |
| LmnI | GCTCC | 6 cut(s) | 193, 201, 343, 540, 2455, 2754 |
| Lsp1109I | GCAGC | 7 cut(s) | 384, 1093, 1683, 2108, 2315, 2475, 3498 |
| LweI | GCATC | 4 cut(s) | 436, 559, 753, 3389 |
| MabI | ACCWGGT | 1 cut(s) | 1798 |
| MaeII | ACGT | 1 cut(s) | 60 |
| MaeIII | GTNAC | 5 cut(s) | 1021, 1907, 2476, 3073, 3251 |
| MalI | GATC | 9 cut(s) | 108, 230, 927, 1854, 1902, 2830, 2865, 3189, 3279 |
| MboI | GATC | 9 cut(s) | 106, 228, 925, 1852, 1900, 2828, 2863, 3187, 3277 |
| MfeI | CAATTG | 3 cut(s) | 2427, 2911, 3267 |
| MflI | RGATCY | 2 cut(s) | 2863, 3187 |
| MhlI | GDGCHC | 5 cut(s) | 14, 198, 2924, 3136, 3433 |
| MlyI | GAGTC | 5 cut(s) | 1532, 2229, 2284, 2563, 3062 |
| MmeI | TCCRAC | 2 cut(s) | 571, 1073 |
| Mph1103I | ATGCAT | 3 cut(s) | 302, 1228, 3404 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1512, 2856 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1225, 3407 |
| MspI | CCGG | 3 cut(s) | 33, 1811, 1934 |
| MspR9I | CCNGG | 7 cut(s) | 220, 950, 1539, 1800, 1880, 1934, 3024 |
| MunI | CAATTG | 3 cut(s) | 2427, 2911, 3267 |
| Mva1269I | GAATGC | 2 cut(s) | 302, 2730 |
| MvaI | CCWGG | 6 cut(s) | 220, 950, 1539, 1800, 1880, 3024 |
| MvnI | CGCG | 1 cut(s) | 3427 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 78, 470, 479, 2746, 2913, 3131 |
| NciI | CCSGG | 1 cut(s) | 1934 |
| NcoI | CCATGG | 1 cut(s) | 47 |
| NdeI | CATATG | 2 cut(s) | 1045, 3535 |
| NdeII | GATC | 9 cut(s) | 106, 228, 925, 1852, 1900, 2828, 2863, 3187, 3277 |
| NlaIV | GGNNCC | 5 cut(s) | 345, 574, 1732, 1931, 3177 |
| NmuCI | GTSAC | 1 cut(s) | 1021 |
| NsiI | ATGCAT | 3 cut(s) | 302, 1228, 3404 |
| NspI | RCATGY | 2 cut(s) | 1226, 1347 |
| NspV | TTCGAA | 1 cut(s) | 3369 |
| PciSI | GCTCTTC | 2 cut(s) | 1527, 3447 |
| PctI | GAATGC | 2 cut(s) | 302, 2730 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1512, 2856 |
| PflFI | GACNNNGTC | 1 cut(s) | 1548 |
| PfoI | TCCNGGA | 1 cut(s) | 3022 |
| PinAI | ACCGGT | 1 cut(s) | 32 |
| PkrI | GCNGC | 7 cut(s) | 374, 1083, 1698, 2123, 2330, 2490, 3488 |
| Ple19I | CGATCG | 1 cut(s) | 231 |
| PleI | GAGTC | 5 cut(s) | 1531, 2229, 2283, 2562, 3062 |
| PpsI | GAGTC | 5 cut(s) | 1531, 2229, 2283, 2562, 3062 |
| PpuMI | RGGWCCY | 2 cut(s) | 1929, 3175 |
| Psp124BI | GAGCTC | 1 cut(s) | 198 |
| Psp5II | RGGWCCY | 2 cut(s) | 1929, 3175 |
| Psp6I | CCWGG | 6 cut(s) | 218, 948, 1537, 1798, 1878, 3022 |
| PspFI | CCCAGC | 1 cut(s) | 473 |
| PspGI | CCWGG | 6 cut(s) | 218, 948, 1537, 1798, 1878, 3022 |
| PspN4I | GGNNCC | 5 cut(s) | 345, 574, 1732, 1931, 3177 |
| PspPI | GGNCC | 4 cut(s) | 1730, 1929, 2177, 3175 |
| PspPPI | RGGWCCY | 2 cut(s) | 1929, 3175 |
| PstI | CTGCAG | 2 cut(s) | 1083, 3619 |
| PsuI | RGATCY | 2 cut(s) | 2863, 3187 |
| PsyI | GACNNNGTC | 1 cut(s) | 1548 |
| PvuI | CGATCG | 1 cut(s) | 231 |
| RsaI | GTAC | 6 cut(s) | 840, 1258, 2191, 2687, 2842, 3144 |
| RsaNI | GTAC | 6 cut(s) | 839, 1257, 2190, 2686, 2841, 3143 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1225, 3407 |
| SacI | GAGCTC | 1 cut(s) | 198 |
| SapI | GCTCTTC | 2 cut(s) | 1527, 3447 |
| SatI | GCNGC | 7 cut(s) | 373, 1082, 1697, 2122, 2329, 2489, 3487 |
| Sau3AI | GATC | 9 cut(s) | 106, 228, 925, 1852, 1900, 2828, 2863, 3187, 3277 |
| Sau96I | GGNCC | 4 cut(s) | 1730, 1929, 2177, 3175 |
| ScaI | AGTACT | 2 cut(s) | 1258, 2687 |
| SchI | GAGTC | 5 cut(s) | 1532, 2229, 2284, 2563, 3062 |
| ScrFI | CCNGG | 7 cut(s) | 220, 950, 1539, 1800, 1880, 1934, 3024 |
| SduI | GDGCHC | 5 cut(s) | 14, 198, 2924, 3136, 3433 |
| SexAI | ACCWGGT | 1 cut(s) | 1798 |
| SfaNI | GCATC | 4 cut(s) | 436, 559, 753, 3389 |
| SfcI | CTRYAG | 4 cut(s) | 1079, 1914, 3384, 3615 |
| SfuI | TTCGAA | 1 cut(s) | 3369 |
| SinI | GGWCC | 2 cut(s) | 1929, 3175 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1225, 3407 |
| SmlI | CTYRAG | 7 cut(s) | 7, 1753, 1921, 2021, 2165, 2332, 2587 |
| SmoI | CTYRAG | 7 cut(s) | 7, 1753, 1921, 2021, 2165, 2332, 2587 |
| SpeI | ACTAGT | 1 cut(s) | 706 |
| SsiI | CCGC | 4 cut(s) | 774, 1351, 2971, 3582 |
| SspI | AATATT | 2 cut(s) | 1849, 3608 |
| SstI | GAGCTC | 1 cut(s) | 198 |
| StyD4I | CCNGG | 7 cut(s) | 218, 948, 1537, 1798, 1878, 1932, 3022 |
| StyI | CCWWGG | 2 cut(s) | 47, 2546 |
| TaaI | ACNGT | 8 cut(s) | 785, 1140, 1273, 1965, 2498, 2630, 2926, 3259 |
| TaiI | ACGT | 1 cut(s) | 63 |
| TaqI | TCGA | 6 cut(s) | 210, 390, 1009, 1899, 3055, 3369 |
| TatI | WGTACW | 4 cut(s) | 838, 1256, 2685, 2840 |
| TscAI | CASTG | 5 cut(s) | 134, 208, 2446, 2644, 2967 |
| TseFI | GTSAC | 1 cut(s) | 1021 |
| TseI | GCWGC | 7 cut(s) | 372, 1081, 1696, 2121, 2328, 2488, 3486 |
| Tsp45I | GTSAC | 1 cut(s) | 1021 |
| TspGWI | ACGGA | 2 cut(s) | 1267, 3147 |
| TspRI | CASTG | 5 cut(s) | 134, 208, 2446, 2644, 2967 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1548 |
| VneI | GTGCAC | 1 cut(s) | 3429 |
| VpaK11BI | GGWCC | 2 cut(s) | 1929, 3175 |
| XbaI | TCTAGA | 1 cut(s) | 3331 |
| XceI | RCATGY | 2 cut(s) | 1226, 1347 |
| XmiI | GTMKAC | 1 cut(s) | 1477 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1512, 2856 |
| ZrmI | AGTACT | 2 cut(s) | 1258, 2687 |
| Zsp2I | ATGCAT | 3 cut(s) | 302, 1228, 3404 |