resistance protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| NB-ARC | PF00931 | 2 - 146 | 9.3e-18 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 217 - 286 | 1e-14 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_13 | PF23286 | 475 - 562 | 1e-06 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 503 - 579 | 5.7e-11 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 621 - 749 | 5.4e-06 | Leucine-rich repeat region |
| C-JID | PF20160 | 805 - 930 | 2.5e-15 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 870 |
| AccB1I | GGYRCC | 1 cut(s) | 2759 |
| AccBSI | CCGCTC | 2 cut(s) | 1977, 2201 |
| AccI | GTMKAC | 2 cut(s) | 59, 2475 |
| AccIII | TCCGGA | 1 cut(s) | 448 |
| AciI | CCGC | 5 cut(s) | 732, 1977, 2201, 2606, 2737 |
| AclWI | GGATC | 4 cut(s) | 23, 535, 1270, 1321 |
| AcoI | YGGCCR | 1 cut(s) | 1713 |
| AcsI | RAATTY | 9 cut(s) | 65, 1022, 1204, 1475, 2032, 2092, 2149, 2427, 2886 |
| AcuI | CTGAAG | 2 cut(s) | 1622, 2448 |
| AdeI | CACNNNGTG | 1 cut(s) | 362 |
| AfaI | GTAC | 5 cut(s) | 720, 981, 1618, 2119, 2683 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 1340, 1478, 1868, 2390, 2743 |
| AflII | CTTAAG | 2 cut(s) | 515, 1373 |
| AjnI | CCWGG | 3 cut(s) | 742, 1710, 2416 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1831, 1863 |
| Alw21I | GWGCWC | 3 cut(s) | 1047, 1149, 2265 |
| Alw26I | GTCTC | 3 cut(s) | 100, 284, 780 |
| AlwI | GGATC | 4 cut(s) | 23, 535, 1270, 1321 |
| Ama87I | CYCGRG | 1 cut(s) | 1301 |
| Aor13HI | TCCGGA | 1 cut(s) | 448 |
| AoxI | GGCC | 2 cut(s) | 1713, 2734 |
| ApeKI | GCWGC | 6 cut(s) | 649, 935, 1563, 1944, 2052, 2739 |
| ApoI | RAATTY | 9 cut(s) | 65, 1022, 1204, 1475, 2032, 2092, 2149, 2427, 2886 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 817, 849 |
| AseI | ATTAAT | 1 cut(s) | 1781 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 212, 1647 |
| AspLEI | GCGC | 1 cut(s) | 2605 |
| AspS9I | GGNCC | 1 cut(s) | 154 |
| AsuC2I | CCSGG | 1 cut(s) | 1932 |
| AsuHPI | GGTGA | 4 cut(s) | 560, 881, 1334, 1946 |
| AsuII | TTCGAA | 1 cut(s) | 1134 |
| AvaI | CYCGRG | 1 cut(s) | 1301 |
| AvaII | GGWCC | 1 cut(s) | 154 |
| BaeGI | GKGCMC | 1 cut(s) | 2764 |
| BanI | GGYRCC | 1 cut(s) | 2759 |
| BanII | GRGCYC | 2 cut(s) | 1149, 1875 |
| BauI | CACGAG | 1 cut(s) | 2664 |
| BbsI | GAAGAC | 4 cut(s) | 494, 1601, 1640, 2454 |
| Bbv12I | GWGCWC | 3 cut(s) | 1047, 1149, 2265 |
| BbvCI | CCTCAGC | 1 cut(s) | 764 |
| BbvI | GCAGC | 6 cut(s) | 661, 947, 1575, 1931, 2064, 2726 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1706, 1740 |
| BciT130I | CCWGG | 3 cut(s) | 744, 1712, 2418 |
| BcnI | CCSGG | 1 cut(s) | 1932 |
| BcoDI | GTCTC | 3 cut(s) | 100, 284, 780 |
| BfaI | CTAG | 6 cut(s) | 125, 333, 956, 1319, 1673, 2196 |
| BfmI | CTRYAG | 4 cut(s) | 933, 1338, 1883, 2001 |
| BfrI | CTTAAG | 2 cut(s) | 515, 1373 |
| BfuAI | ACCTGC | 1 cut(s) | 870 |
| BglII | AGATCT | 3 cut(s) | 106, 1297, 2864 |
| BisI | GCNGC | 8 cut(s) | 650, 936, 1564, 1945, 2053, 2606, 2737, 2740 |
| BlsI | GCNGC | 8 cut(s) | 651, 937, 1565, 1946, 2054, 2607, 2738, 2741 |
| BmcAI | AGTACT | 1 cut(s) | 720 |
| Bme1390I | CCNGG | 4 cut(s) | 744, 1712, 1932, 2418 |
| Bme18I | GGWCC | 1 cut(s) | 154 |
| BmeT110I | CYCGRG | 1 cut(s) | 1301 |
| BmgT120I | GGNCC | 1 cut(s) | 154 |
| BmiI | GGNNCC | 4 cut(s) | 1709, 1874, 2380, 2761 |
| BmrFI | CCNGG | 4 cut(s) | 744, 1712, 1932, 2418 |
| BmrI | ACTGGG | 1 cut(s) | 2832 |
| BmsI | GCATC | 5 cut(s) | 394, 798, 1185, 1714, 2650 |
| BmuI | ACTGGG | 1 cut(s) | 2832 |
| BpiI | GAAGAC | 4 cut(s) | 494, 1601, 1640, 2454 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2249, 2281 |
| BpmI | CTGGAG | 2 cut(s) | 2048, 2147 |
| Bpu10I | CCTNAGC | 3 cut(s) | 508, 764, 2731 |
| Bpu14I | TTCGAA | 1 cut(s) | 1134 |
| BpuEI | CTTGAG | 5 cut(s) | 843, 1343, 1438, 1993, 2276 |
| BpuMI | CCSGG | 1 cut(s) | 1932 |
| Bsa29I | ATCGAT | 1 cut(s) | 785 |
| BsaAI | YACGTR | 1 cut(s) | 2505 |
| BsaI | GGTCTC | 1 cut(s) | 780 |
| BsaJI | CCNNGG | 3 cut(s) | 150, 1073, 2432 |
| BsaWI | WCCGGW | 2 cut(s) | 448, 1138 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2021, 2051 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 1340, 1478, 1868, 2390, 2743 |
| Bse1I | ACTGG | 3 cut(s) | 2130, 2838, 2851 |
| Bse3DI | GCAATG | 1 cut(s) | 1079 |
| BseAI | TCCGGA | 1 cut(s) | 448 |
| BseBI | CCWGG | 3 cut(s) | 744, 1712, 2418 |
| BseCI | ATCGAT | 1 cut(s) | 785 |
| BseDI | CCNNGG | 3 cut(s) | 150, 1073, 2432 |
| BseGI | GGATG | 9 cut(s) | 60, 457, 739, 813, 1147, 1667, 2286, 2558, 2788 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 1340, 1478, 1868, 2390, 2743 |
| BseMI | GCAATG | 1 cut(s) | 1079 |
| BseMII | CTCAG | 6 cut(s) | 111, 778, 1171, 1550, 2745, 2850 |
| BseNI | ACTGG | 3 cut(s) | 2130, 2838, 2851 |
| BseRI | GAGGAG | 3 cut(s) | 1746, 1851, 2170 |
| BseSI | GKGCMC | 1 cut(s) | 2764 |
| BseXI | GCAGC | 6 cut(s) | 661, 947, 1575, 1931, 2064, 2726 |
| BsgI | GTGCAG | 2 cut(s) | 1366, 1938 |
| BshFI | GGCC | 2 cut(s) | 1715, 2736 |
| BshNI | GGYRCC | 1 cut(s) | 2759 |
| BshVI | ATCGAT | 1 cut(s) | 785 |
| BsiHKAI | GWGCWC | 3 cut(s) | 1047, 1149, 2265 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1301 |
| BsiSI | CCGG | 3 cut(s) | 449, 1139, 1932 |
| BslFI | GGGAC | 3 cut(s) | 911, 943, 2581 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 1340, 1478, 1868, 2390, 2743 |
| BsmAI | GTCTC | 3 cut(s) | 100, 284, 780 |
| BsmFI | GGGAC | 3 cut(s) | 911, 943, 2581 |
| BsnI | GGCC | 2 cut(s) | 1715, 2736 |
| Bso31I | GGTCTC | 1 cut(s) | 780 |
| BsoBI | CYCGRG | 1 cut(s) | 1301 |
| Bsp119I | TTCGAA | 1 cut(s) | 1134 |
| Bsp1286I | GDGCHC | 5 cut(s) | 1047, 1149, 1875, 2265, 2764 |
| Bsp13I | TCCGGA | 1 cut(s) | 448 |
| Bsp143I | GATC | 8 cut(s) | 15, 106, 121, 527, 1275, 1297, 1326, 2864 |
| BspACI | CCGC | 5 cut(s) | 732, 1977, 2201, 2606, 2737 |
| BspANI | GGCC | 2 cut(s) | 1715, 2736 |
| BspCNI | CTCAG | 6 cut(s) | 110, 777, 1170, 1551, 2744, 2851 |
| BspDI | ATCGAT | 1 cut(s) | 785 |
| BspEI | TCCGGA | 1 cut(s) | 448 |
| BspLI | GGNNCC | 4 cut(s) | 1709, 1874, 2380, 2761 |
| BspMAI | CTGCAG | 1 cut(s) | 937 |
| BspMI | ACCTGC | 1 cut(s) | 870 |
| BspPI | GGATC | 4 cut(s) | 23, 535, 1270, 1321 |
| BspQI | GCTCTTC | 1 cut(s) | 414 |
| BspT104I | TTCGAA | 1 cut(s) | 1134 |
| BspT107I | GGYRCC | 1 cut(s) | 2759 |
| BspTI | CTTAAG | 2 cut(s) | 515, 1373 |
| BspTNI | GGTCTC | 1 cut(s) | 780 |
| BsrBI | CCGCTC | 2 cut(s) | 1977, 2201 |
| BsrDI | GCAATG | 1 cut(s) | 1079 |
| BsrI | ACTGG | 3 cut(s) | 2130, 2838, 2851 |
| BssECI | CCNNGG | 3 cut(s) | 150, 1073, 2432 |
| BssMI | GATC | 8 cut(s) | 15, 106, 121, 527, 1275, 1297, 1326, 2864 |
| BssNAI | GTATAC | 1 cut(s) | 60 |
| BssSI | CACGAG | 1 cut(s) | 2664 |
| BssT1I | CCWWGG | 1 cut(s) | 150 |
| Bst1107I | GTATAC | 1 cut(s) | 60 |
| Bst2BI | CACGAG | 1 cut(s) | 2664 |
| Bst2UI | CCWGG | 3 cut(s) | 744, 1712, 2418 |
| Bst4CI | ACNGT | 5 cut(s) | 593, 984, 1689, 2362, 2699 |
| Bst6I | CTCTTC | 9 cut(s) | 158, 414, 433, 538, 546, 1764, 1838, 2586, 2784 |
| BstAFI | CTTAAG | 2 cut(s) | 515, 1373 |
| BstBAI | YACGTR | 1 cut(s) | 2505 |
| BstBI | TTCGAA | 1 cut(s) | 1134 |
| BstC8I | GCNNGC | 3 cut(s) | 1538, 2057, 2639 |
| BstDEI | CTNAG | 9 cut(s) | 97, 508, 764, 1005, 1157, 1407, 1559, 2731, 2859 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 1866, 2388 |
| BstF5I | GGATG | 9 cut(s) | 60, 457, 739, 813, 1147, 1667, 2286, 2558, 2788 |
| BstHHI | GCGC | 1 cut(s) | 2605 |
| BstKTI | GATC | 8 cut(s) | 18, 109, 124, 530, 1278, 1300, 1329, 2867 |
| BstMAI | GTCTC | 3 cut(s) | 100, 284, 780 |
| BstMBI | GATC | 8 cut(s) | 15, 106, 121, 527, 1275, 1297, 1326, 2864 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 41, 1173, 2525, 2647, 2736 |
| BstNI | CCWGG | 3 cut(s) | 744, 1712, 2418 |
| BstNSI | RCATGY | 2 cut(s) | 681, 1540 |
| BstSCI | CCNGG | 4 cut(s) | 742, 1710, 1930, 2416 |
| BstSFI | CTRYAG | 4 cut(s) | 933, 1338, 1883, 2001 |
| BstSLI | GKGCMC | 1 cut(s) | 2764 |
| BstV1I | GCAGC | 6 cut(s) | 661, 947, 1575, 1931, 2064, 2726 |
| BstV2I | GAAGAC | 4 cut(s) | 494, 1601, 1640, 2454 |
| BstX2I | RGATCY | 5 cut(s) | 106, 1275, 1297, 1326, 2864 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 2633, 2819 |
| BstYI | RGATCY | 5 cut(s) | 106, 1275, 1297, 1326, 2864 |
| BstZ17I | GTATAC | 1 cut(s) | 60 |
| Bsu15I | ATCGAT | 1 cut(s) | 785 |
| BsuRI | GGCC | 2 cut(s) | 1715, 2736 |
| BsuTUI | ATCGAT | 1 cut(s) | 785 |
| BtgZI | GCGATG | 1 cut(s) | 2301 |
| BtsCI | GGATG | 9 cut(s) | 60, 457, 739, 813, 1147, 1667, 2286, 2558, 2788 |
| BtsI | GCAGTG | 1 cut(s) | 1521 |
| BtsIMutI | CAGTG | 5 cut(s) | 989, 1521, 1694, 2123, 2844 |
| BveI | ACCTGC | 1 cut(s) | 870 |
| Cac8I | GCNNGC | 3 cut(s) | 1538, 2057, 2639 |
| CfoI | GCGC | 1 cut(s) | 2605 |
| Cfr13I | GGNCC | 1 cut(s) | 154 |
| ClaI | ATCGAT | 1 cut(s) | 785 |
| Csp6I | GTAC | 5 cut(s) | 719, 980, 1617, 2118, 2682 |
| CviQI | GTAC | 5 cut(s) | 719, 980, 1617, 2118, 2682 |
| DdeI | CTNAG | 9 cut(s) | 97, 508, 764, 1005, 1157, 1407, 1559, 2731, 2859 |
| DpnI | GATC | 8 cut(s) | 17, 108, 123, 529, 1277, 1299, 1328, 2866 |
| DpnII | GATC | 8 cut(s) | 15, 106, 121, 527, 1275, 1297, 1326, 2864 |
| DraI | TTTAAA | 4 cut(s) | 393, 597, 688, 2725 |
| DraIII | CACNNNGTG | 1 cut(s) | 362 |
| EaeI | YGGCCR | 1 cut(s) | 1713 |
| Eam1104I | CTCTTC | 9 cut(s) | 158, 414, 433, 538, 546, 1764, 1838, 2586, 2784 |
| EarI | CTCTTC | 9 cut(s) | 158, 414, 433, 538, 546, 1764, 1838, 2586, 2784 |
| Ecl136II | GAGCTC | 1 cut(s) | 1147 |
| Eco130I | CCWWGG | 1 cut(s) | 150 |
| Eco24I | GRGCYC | 2 cut(s) | 1149, 1875 |
| Eco31I | GGTCTC | 1 cut(s) | 780 |
| Eco32I | GATATC | 2 cut(s) | 760, 783 |
| Eco47I | GGWCC | 1 cut(s) | 154 |
| Eco53kI | GAGCTC | 1 cut(s) | 1147 |
| Eco57I | CTGAAG | 2 cut(s) | 1622, 2448 |
| Eco88I | CYCGRG | 1 cut(s) | 1301 |
| EcoICRI | GAGCTC | 1 cut(s) | 1147 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 1866, 2388 |
| EcoO109I | RGGNCCY | 1 cut(s) | 154 |
| EcoRI | GAATTC | 1 cut(s) | 1475 |
| EcoRII | CCWGG | 3 cut(s) | 742, 1710, 2416 |
| EcoRV | GATATC | 2 cut(s) | 760, 783 |
| EcoT14I | CCWWGG | 1 cut(s) | 150 |
| EcoT22I | ATGCAT | 1 cut(s) | 813 |
| EcoT38I | GRGCYC | 2 cut(s) | 1149, 1875 |
| ErhI | CCWWGG | 1 cut(s) | 150 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1525, 1557 |
| FaqI | GGGAC | 3 cut(s) | 911, 943, 2581 |
| FblI | GTMKAC | 2 cut(s) | 59, 2475 |
| Fnu4HI | GCNGC | 8 cut(s) | 650, 936, 1564, 1945, 2053, 2606, 2737, 2740 |
| FokI | GGATG | 9 cut(s) | 67, 464, 726, 820, 1154, 1674, 2273, 2565, 2795 |
| FriOI | GRGCYC | 2 cut(s) | 1149, 1875 |
| Fsp4HI | GCNGC | 8 cut(s) | 650, 936, 1564, 1945, 2053, 2606, 2737, 2740 |
| FspBI | CTAG | 6 cut(s) | 125, 333, 956, 1319, 1673, 2196 |
| GlaI | GCGC | 1 cut(s) | 2604 |
| GluI | GCNGC | 8 cut(s) | 650, 936, 1564, 1945, 2053, 2606, 2737, 2740 |
| GsuI | CTGGAG | 2 cut(s) | 2048, 2147 |
| HaeIII | GGCC | 2 cut(s) | 1715, 2736 |
| HapII | CCGG | 3 cut(s) | 449, 1139, 1932 |
| HhaI | GCGC | 1 cut(s) | 2605 |
| Hin6I | GCGC | 1 cut(s) | 2603 |
| HinP1I | GCGC | 1 cut(s) | 2603 |
| HindIII | AAGCTT | 5 cut(s) | 42, 79, 2057, 2215, 2674 |
| HpaII | CCGG | 3 cut(s) | 449, 1139, 1932 |
| HphI | GGTGA | 4 cut(s) | 560, 881, 1334, 1946 |
| Hpy166II | GTNNAC | 5 cut(s) | 60, 256, 872, 2206, 2476 |
| Hpy8I | GTNNAC | 5 cut(s) | 60, 256, 872, 2206, 2476 |
| HpyAV | CCTTC | 7 cut(s) | 191, 1409, 1551, 1627, 2006, 2288, 2503 |
| HpyCH4III | ACNGT | 5 cut(s) | 593, 984, 1689, 2362, 2699 |
| HpyCH4IV | ACGT | 4 cut(s) | 186, 874, 1775, 2504 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 41, 1173, 2525, 2647, 2736 |
| HpyF3I | CTNAG | 9 cut(s) | 97, 508, 764, 1005, 1157, 1407, 1559, 2731, 2859 |
| HpySE526I | ACGT | 4 cut(s) | 186, 874, 1775, 2504 |
| HspAI | GCGC | 1 cut(s) | 2603 |
| Kpn2I | TCCGGA | 1 cut(s) | 448 |
| Kzo9I | GATC | 8 cut(s) | 15, 106, 121, 527, 1275, 1297, 1326, 2864 |
| LguI | GCTCTTC | 1 cut(s) | 414 |
| LmnI | GCTCC | 4 cut(s) | 1050, 1707, 1878, 2247 |
| Lsp1109I | GCAGC | 6 cut(s) | 661, 947, 1575, 1931, 2064, 2726 |
| LweI | GCATC | 5 cut(s) | 394, 798, 1185, 1714, 2650 |
| MaeI | CTAG | 6 cut(s) | 125, 333, 956, 1319, 1673, 2196 |
| MaeII | ACGT | 4 cut(s) | 186, 874, 1775, 2504 |
| MaeIII | GTNAC | 5 cut(s) | 1749, 1901, 1979, 2659, 2806 |
| MalI | GATC | 8 cut(s) | 17, 108, 123, 529, 1277, 1299, 1328, 2866 |
| MbiI | CCGCTC | 2 cut(s) | 1977, 2201 |
| MboI | GATC | 8 cut(s) | 15, 106, 121, 527, 1275, 1297, 1326, 2864 |
| MfeI | CAATTG | 1 cut(s) | 840 |
| MflI | RGATCY | 5 cut(s) | 106, 1275, 1297, 1326, 2864 |
| MhlI | GDGCHC | 5 cut(s) | 1047, 1149, 1875, 2265, 2764 |
| MlyI | GAGTC | 4 cut(s) | 102, 1324, 2603, 2656 |
| MmeI | TCCRAC | 1 cut(s) | 2650 |
| Mph1103I | ATGCAT | 1 cut(s) | 813 |
| MroI | TCCGGA | 1 cut(s) | 448 |
| MroXI | GAANNNNTTC | 2 cut(s) | 212, 1647 |
| MspA1I | CMGCKG | 1 cut(s) | 2739 |
| MspCI | CTTAAG | 2 cut(s) | 515, 1373 |
| MspI | CCGG | 3 cut(s) | 449, 1139, 1932 |
| MspR9I | CCNGG | 4 cut(s) | 744, 1712, 1932, 2418 |
| MunI | CAATTG | 1 cut(s) | 840 |
| MvaI | CCWGG | 3 cut(s) | 744, 1712, 2418 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 41, 1173, 2525, 2647, 2736 |
| NciI | CCSGG | 1 cut(s) | 1932 |
| NdeII | GATC | 8 cut(s) | 15, 106, 121, 527, 1275, 1297, 1326, 2864 |
| NlaIV | GGNNCC | 4 cut(s) | 1709, 1874, 2380, 2761 |
| NmeAIII | GCCGAG | 1 cut(s) | 1741 |
| NmuCI | GTSAC | 2 cut(s) | 2659, 2806 |
| NsiI | ATGCAT | 1 cut(s) | 813 |
| NspI | RCATGY | 2 cut(s) | 681, 1540 |
| NspV | TTCGAA | 1 cut(s) | 1134 |
| PaeI | GCATGC | 1 cut(s) | 1540 |
| PaeR7I | CTCGAG | 1 cut(s) | 1301 |
| PciSI | GCTCTTC | 1 cut(s) | 414 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 1081, 1308 |
| PdmI | GAANNNNTTC | 2 cut(s) | 212, 1647 |
| PflFI | GACNNNGTC | 1 cut(s) | 92 |
| PfoI | TCCNGGA | 1 cut(s) | 2416 |
| PkrI | GCNGC | 8 cut(s) | 651, 937, 1565, 1946, 2054, 2607, 2738, 2741 |
| PleI | GAGTC | 4 cut(s) | 101, 1323, 2602, 2656 |
| PpsI | GAGTC | 4 cut(s) | 101, 1323, 2602, 2656 |
| Ppu21I | YACGTR | 1 cut(s) | 2505 |
| PpuMI | RGGWCCY | 1 cut(s) | 154 |
| PshBI | ATTAAT | 1 cut(s) | 1781 |
| Psp124BI | GAGCTC | 1 cut(s) | 1149 |
| Psp5II | RGGWCCY | 1 cut(s) | 154 |
| Psp6I | CCWGG | 3 cut(s) | 742, 1710, 2416 |
| PspGI | CCWGG | 3 cut(s) | 742, 1710, 2416 |
| PspN4I | GGNNCC | 4 cut(s) | 1709, 1874, 2380, 2761 |
| PspPI | GGNCC | 1 cut(s) | 154 |
| PspPPI | RGGWCCY | 1 cut(s) | 154 |
| PstI | CTGCAG | 1 cut(s) | 937 |
| PsuI | RGATCY | 5 cut(s) | 106, 1275, 1297, 1326, 2864 |
| PsyI | GACNNNGTC | 1 cut(s) | 92 |
| RsaI | GTAC | 5 cut(s) | 720, 981, 1618, 2119, 2683 |
| RsaNI | GTAC | 5 cut(s) | 719, 980, 1617, 2118, 2682 |
| SacI | GAGCTC | 1 cut(s) | 1149 |
| SapI | GCTCTTC | 1 cut(s) | 414 |
| SatI | GCNGC | 8 cut(s) | 650, 936, 1564, 1945, 2053, 2606, 2737, 2740 |
| Sau3AI | GATC | 8 cut(s) | 15, 106, 121, 527, 1275, 1297, 1326, 2864 |
| Sau96I | GGNCC | 1 cut(s) | 154 |
| ScaI | AGTACT | 1 cut(s) | 720 |
| SchI | GAGTC | 4 cut(s) | 102, 1324, 2603, 2656 |
| ScrFI | CCNGG | 4 cut(s) | 744, 1712, 1932, 2418 |
| SduI | GDGCHC | 5 cut(s) | 1047, 1149, 1875, 2265, 2764 |
| SfaNI | GCATC | 5 cut(s) | 394, 798, 1185, 1714, 2650 |
| SfcI | CTRYAG | 4 cut(s) | 933, 1338, 1883, 2001 |
| Sfr274I | CTCGAG | 1 cut(s) | 1301 |
| SfuI | TTCGAA | 1 cut(s) | 1134 |
| SinI | GGWCC | 1 cut(s) | 154 |
| SlaI | CTCGAG | 1 cut(s) | 1301 |
| SmlI | CTYRAG | 8 cut(s) | 515, 858, 1301, 1358, 1373, 1453, 1972, 2255 |
| SmoI | CTYRAG | 8 cut(s) | 515, 858, 1301, 1358, 1373, 1453, 1972, 2255 |
| SphI | GCATGC | 1 cut(s) | 1540 |
| SsiI | CCGC | 5 cut(s) | 732, 1977, 2201, 2606, 2737 |
| SspI | AATATT | 1 cut(s) | 661 |
| SspMI | CTAG | 6 cut(s) | 125, 333, 956, 1319, 1673, 2196 |
| SstI | GAGCTC | 1 cut(s) | 1149 |
| StyD4I | CCNGG | 4 cut(s) | 742, 1710, 1930, 2416 |
| StyI | CCWWGG | 1 cut(s) | 150 |
| TaaI | ACNGT | 5 cut(s) | 593, 984, 1689, 2362, 2699 |
| TaiI | ACGT | 4 cut(s) | 189, 877, 1778, 2507 |
| TaqI | TCGA | 6 cut(s) | 785, 1134, 1179, 1302, 1828, 2342 |
| TaqII | GACCGA | 1 cut(s) | 1065 |
| TatI | WGTACW | 2 cut(s) | 718, 2117 |
| TauI | GCSGC | 2 cut(s) | 2608, 2739 |
| TscAI | CASTG | 5 cut(s) | 989, 1528, 1694, 2130, 2851 |
| TseFI | GTSAC | 2 cut(s) | 2659, 2806 |
| TseI | GCWGC | 6 cut(s) | 649, 935, 1563, 1944, 2052, 2739 |
| Tsp45I | GTSAC | 2 cut(s) | 2659, 2806 |
| TspGWI | ACGGA | 1 cut(s) | 1223 |
| TspRI | CASTG | 5 cut(s) | 989, 1528, 1694, 2130, 2851 |
| Tth111I | GACNNNGTC | 1 cut(s) | 92 |
| Vha464I | CTTAAG | 2 cut(s) | 515, 1373 |
| VpaK11BI | GGWCC | 1 cut(s) | 154 |
| VspI | ATTAAT | 1 cut(s) | 1781 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 1866, 2388 |
| XapI | RAATTY | 9 cut(s) | 65, 1022, 1204, 1475, 2032, 2092, 2149, 2427, 2886 |
| XbaI | TCTAGA | 1 cut(s) | 2195 |
| XceI | RCATGY | 2 cut(s) | 681, 1540 |
| XhoI | CTCGAG | 1 cut(s) | 1301 |
| XmiI | GTMKAC | 2 cut(s) | 59, 2475 |
| XmnI | GAANNNNTTC | 2 cut(s) | 212, 1647 |
| XspI | CTAG | 6 cut(s) | 125, 333, 956, 1319, 1673, 2196 |
| ZrmI | AGTACT | 1 cut(s) | 720 |
| Zsp2I | ATGCAT | 1 cut(s) | 813 |