TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| LRR_14 | PF23598 | 27 - 128 | 1.8e-13 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 49 - 135 | 6.3e-09 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_13 | PF23286 | 120 - 206 | 7.9e-10 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 133 - 200 | 3.7e-10 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 188 - 271 | 2.9e-14 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 191 - 277 | 2.1e-07 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_R13L1-DRL21 | PF25019 | 210 - 273 | 3.8e-06 | R13L1/DRL21 LRRs |
| LRR_14 | PF23598 | 259 - 341 | 4.6e-09 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 350 - 416 | 6e-07 | Leucine-rich repeat region |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1218 |
| AccB1I | GGYRCC | 1 cut(s) | 1236 |
| AccI | GTMKAC | 1 cut(s) | 1180 |
| AciI | CCGC | 1 cut(s) | 558 |
| AclWI | GGATC | 1 cut(s) | 985 |
| AcoI | YGGCCR | 1 cut(s) | 1198 |
| AcsI | RAATTY | 2 cut(s) | 941, 1081 |
| AcuI | CTGAAG | 1 cut(s) | 1125 |
| AfaI | GTAC | 2 cut(s) | 37, 138 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 867 |
| AlwI | GGATC | 1 cut(s) | 985 |
| Ama87I | CYCGRG | 1 cut(s) | 1187 |
| AoxI | GGCC | 1 cut(s) | 1198 |
| ApeKI | GCWGC | 1 cut(s) | 177 |
| ApoI | RAATTY | 2 cut(s) | 941, 1081 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1003, 1035 |
| AseI | ATTAAT | 1 cut(s) | 1145 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 294 |
| AspS9I | GGNCC | 1 cut(s) | 249 |
| AsuHPI | GGTGA | 1 cut(s) | 963 |
| AvaI | CYCGRG | 1 cut(s) | 1187 |
| AvaII | GGWCC | 1 cut(s) | 249 |
| BanI | GGYRCC | 1 cut(s) | 1236 |
| BauI | CACGAG | 1 cut(s) | 1272 |
| BbsI | GAAGAC | 5 cut(s) | 329, 542, 755, 1131, 1214 |
| BbvI | GCAGC | 1 cut(s) | 164 |
| BccI | CCATC | 1 cut(s) | 1276 |
| BfaI | CTAG | 3 cut(s) | 26, 662, 1209 |
| BglII | AGATCT | 1 cut(s) | 799 |
| BisI | GCNGC | 1 cut(s) | 178 |
| BlsI | GCNGC | 1 cut(s) | 179 |
| Bme18I | GGWCC | 1 cut(s) | 249 |
| BmeT110I | CYCGRG | 1 cut(s) | 1187 |
| BmgT120I | GGNCC | 1 cut(s) | 249 |
| BmiI | GGNNCC | 2 cut(s) | 250, 1238 |
| BmrI | ACTGGG | 1 cut(s) | 1113 |
| BmsI | GCATC | 2 cut(s) | 1121, 1203 |
| BmuI | ACTGGG | 1 cut(s) | 1113 |
| BoxI | GACNNNNGTC | 1 cut(s) | 210 |
| BpiI | GAAGAC | 5 cut(s) | 329, 542, 755, 1131, 1214 |
| BpuEI | CTTGAG | 4 cut(s) | 32, 544, 575, 776 |
| BsaAI | YACGTR | 1 cut(s) | 140 |
| BsaBI | GATNNNNATC | 2 cut(s) | 804, 1155 |
| BsaJI | CCNNGG | 1 cut(s) | 58 |
| BsaWI | WCCGGW | 1 cut(s) | 625 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 867 |
| Bse118I | RCCGGY | 1 cut(s) | 251 |
| Bse1I | ACTGG | 2 cut(s) | 1119, 1328 |
| Bse3DI | GCAATG | 1 cut(s) | 1119 |
| Bse8I | GATNNNNATC | 2 cut(s) | 804, 1155 |
| BseDI | CCNNGG | 1 cut(s) | 58 |
| BseGI | GGATG | 3 cut(s) | 634, 847, 1136 |
| BseJI | GATNNNNATC | 2 cut(s) | 804, 1155 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 867 |
| BseMI | GCAATG | 1 cut(s) | 1119 |
| BseNI | ACTGG | 2 cut(s) | 1119, 1328 |
| BseRI | GAGGAG | 4 cut(s) | 245, 431, 688, 901 |
| BseXI | GCAGC | 1 cut(s) | 164 |
| BseYI | CCCAGC | 1 cut(s) | 953 |
| BshFI | GGCC | 1 cut(s) | 1200 |
| BshNI | GGYRCC | 1 cut(s) | 1236 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1187 |
| BsiSI | CCGG | 3 cut(s) | 252, 626, 839 |
| BslFI | GGGAC | 2 cut(s) | 262, 1307 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 867 |
| BsmFI | GGGAC | 2 cut(s) | 262, 1307 |
| BsmI | GAATGC | 4 cut(s) | 288, 501, 714, 1063 |
| BsnI | GGCC | 1 cut(s) | 1200 |
| BsoBI | CYCGRG | 1 cut(s) | 1187 |
| Bsp1407I | TGTACA | 1 cut(s) | 35 |
| Bsp143I | GATC | 2 cut(s) | 799, 990 |
| BspACI | CCGC | 1 cut(s) | 558 |
| BspANI | GGCC | 1 cut(s) | 1200 |
| BspLI | GGNNCC | 2 cut(s) | 250, 1238 |
| BspPI | GGATC | 1 cut(s) | 985 |
| BspT107I | GGYRCC | 1 cut(s) | 1236 |
| BsrDI | GCAATG | 1 cut(s) | 1119 |
| BsrFI | RCCGGY | 1 cut(s) | 251 |
| BsrGI | TGTACA | 1 cut(s) | 35 |
| BsrI | ACTGG | 2 cut(s) | 1119, 1328 |
| BssAI | RCCGGY | 1 cut(s) | 251 |
| BssECI | CCNNGG | 1 cut(s) | 58 |
| BssMI | GATC | 2 cut(s) | 799, 990 |
| BssSI | CACGAG | 1 cut(s) | 1272 |
| Bst2BI | CACGAG | 1 cut(s) | 1272 |
| Bst4CI | ACNGT | 5 cut(s) | 45, 435, 969, 1220, 1315 |
| BstAUI | TGTACA | 1 cut(s) | 35 |
| BstBAI | YACGTR | 1 cut(s) | 140 |
| BstC8I | GCNNGC | 1 cut(s) | 130 |
| BstEII | GGTNACC | 1 cut(s) | 969 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 865 |
| BstF5I | GGATG | 3 cut(s) | 634, 847, 1136 |
| BstKTI | GATC | 2 cut(s) | 802, 993 |
| BstMBI | GATC | 2 cut(s) | 799, 990 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 210 |
| BstPI | GGTNACC | 1 cut(s) | 969 |
| BstV1I | GCAGC | 1 cut(s) | 164 |
| BstV2I | GAAGAC | 5 cut(s) | 329, 542, 755, 1131, 1214 |
| BstX2I | RGATCY | 1 cut(s) | 799 |
| BstYI | RGATCY | 1 cut(s) | 799 |
| BsuRI | GGCC | 1 cut(s) | 1200 |
| BtsCI | GGATG | 3 cut(s) | 634, 847, 1136 |
| BtsI | GCAGTG | 3 cut(s) | 139, 352, 778 |
| BtsIMutI | CAGTG | 5 cut(s) | 139, 352, 440, 778, 1126 |
| Cac8I | GCNNGC | 1 cut(s) | 130 |
| Cfr10I | RCCGGY | 1 cut(s) | 251 |
| Cfr13I | GGNCC | 1 cut(s) | 249 |
| CseI | GACGC | 1 cut(s) | 536 |
| Csp6I | GTAC | 2 cut(s) | 36, 137 |
| CviAII | CATG | 5 cut(s) | 208, 239, 854, 981, 1233 |
| CviQI | GTAC | 2 cut(s) | 36, 137 |
| DpnI | GATC | 2 cut(s) | 801, 992 |
| DpnII | GATC | 2 cut(s) | 799, 990 |
| DraI | TTTAAA | 1 cut(s) | 1155 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1218 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1218 |
| EaeI | YGGCCR | 1 cut(s) | 1198 |
| Eco47I | GGWCC | 1 cut(s) | 249 |
| Eco57I | CTGAAG | 1 cut(s) | 1125 |
| Eco88I | CYCGRG | 1 cut(s) | 1187 |
| Eco91I | GGTNACC | 1 cut(s) | 969 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 865 |
| EcoO65I | GGTNACC | 1 cut(s) | 969 |
| EcoRI | GAATTC | 1 cut(s) | 941 |
| FaeI | CATG | 5 cut(s) | 211, 242, 857, 984, 1236 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 101, 133 |
| FaqI | GGGAC | 2 cut(s) | 262, 1307 |
| FatI | CATG | 5 cut(s) | 207, 238, 853, 980, 1232 |
| FblI | GTMKAC | 1 cut(s) | 1180 |
| Fnu4HI | GCNGC | 1 cut(s) | 178 |
| FokI | GGATG | 3 cut(s) | 641, 854, 1143 |
| Fsp4HI | GCNGC | 1 cut(s) | 178 |
| FspBI | CTAG | 3 cut(s) | 26, 662, 1209 |
| GluI | GCNGC | 1 cut(s) | 178 |
| GsaI | CCCAGC | 1 cut(s) | 957 |
| HaeIII | GGCC | 1 cut(s) | 1200 |
| HapII | CCGG | 3 cut(s) | 252, 626, 839 |
| HgaI | GACGC | 1 cut(s) | 536 |
| Hin1II | CATG | 5 cut(s) | 211, 242, 857, 984, 1236 |
| HincII | GTYRAC | 2 cut(s) | 55, 1311 |
| HindII | GTYRAC | 2 cut(s) | 55, 1311 |
| HindIII | AAGCTT | 7 cut(s) | 185, 398, 593, 611, 824, 872, 1244 |
| HinfI | GANTC | 3 cut(s) | 112, 658, 1332 |
| HpaI | GTTAAC | 1 cut(s) | 1311 |
| HpaII | CCGG | 3 cut(s) | 252, 626, 839 |
| HphI | GGTGA | 1 cut(s) | 963 |
| Hpy166II | GTNNAC | 4 cut(s) | 55, 137, 1181, 1311 |
| Hpy188I | TCNGA | 2 cut(s) | 1105, 1251 |
| Hpy188III | TCNNGA | 6 cut(s) | 11, 26, 662, 755, 1209, 1274 |
| Hpy8I | GTNNAC | 4 cut(s) | 55, 137, 1181, 1311 |
| HpyAV | CCTTC | 4 cut(s) | 23, 279, 497, 710 |
| HpyCH4III | ACNGT | 5 cut(s) | 45, 435, 969, 1220, 1315 |
| HpyCH4IV | ACGT | 1 cut(s) | 139 |
| HpySE526I | ACGT | 1 cut(s) | 139 |
| Hsp92II | CATG | 5 cut(s) | 211, 242, 857, 984, 1236 |
| KspAI | GTTAAC | 1 cut(s) | 1311 |
| Kzo9I | GATC | 2 cut(s) | 799, 990 |
| LmnI | GCTCC | 1 cut(s) | 232 |
| Lsp1109I | GCAGC | 1 cut(s) | 164 |
| LweI | GCATC | 2 cut(s) | 1121, 1203 |
| MaeI | CTAG | 3 cut(s) | 26, 662, 1209 |
| MaeII | ACGT | 1 cut(s) | 139 |
| MaeIII | GTNAC | 4 cut(s) | 969, 1019, 1088, 1274 |
| MalI | GATC | 2 cut(s) | 801, 992 |
| MboI | GATC | 2 cut(s) | 799, 990 |
| MboII | GAAGA | 7 cut(s) | 326, 329, 542, 755, 1118, 1131, 1214 |
| MfeI | CAATTG | 1 cut(s) | 1076 |
| MflI | RGATCY | 1 cut(s) | 799 |
| MluCI | AATT | 9 cut(s) | 63, 407, 620, 833, 941, 1076, 1081, 1172, 1284 |
| MroXI | GAANNNNTTC | 1 cut(s) | 294 |
| MslI | CAYNNNNRTG | 1 cut(s) | 243 |
| MspI | CCGG | 3 cut(s) | 252, 626, 839 |
| MunI | CAATTG | 1 cut(s) | 1076 |
| Mva1269I | GAATGC | 4 cut(s) | 288, 501, 714, 1063 |
| NdeII | GATC | 2 cut(s) | 799, 990 |
| NlaIII | CATG | 5 cut(s) | 211, 242, 857, 984, 1236 |
| NlaIV | GGNNCC | 2 cut(s) | 250, 1238 |
| NmuCI | GTSAC | 4 cut(s) | 969, 1019, 1088, 1274 |
| PctI | GAATGC | 4 cut(s) | 288, 501, 714, 1063 |
| PdmI | GAANNNNTTC | 1 cut(s) | 294 |
| PfeI | GAWTC | 3 cut(s) | 112, 658, 1332 |
| PkrI | GCNGC | 1 cut(s) | 179 |
| Ppu21I | YACGTR | 1 cut(s) | 140 |
| PshAI | GACNNNNGTC | 1 cut(s) | 210 |
| PshBI | ATTAAT | 1 cut(s) | 1145 |
| PspEI | GGTNACC | 1 cut(s) | 969 |
| PspFI | CCCAGC | 1 cut(s) | 953 |
| PspN4I | GGNNCC | 2 cut(s) | 250, 1238 |
| PspPI | GGNCC | 1 cut(s) | 249 |
| PsuI | RGATCY | 1 cut(s) | 799 |
| RsaI | GTAC | 2 cut(s) | 37, 138 |
| RsaNI | GTAC | 2 cut(s) | 36, 137 |
| RseI | CAYNNNNRTG | 1 cut(s) | 243 |
| SatI | GCNGC | 1 cut(s) | 178 |
| Sau3AI | GATC | 2 cut(s) | 799, 990 |
| Sau96I | GGNCC | 1 cut(s) | 249 |
| SfaNI | GCATC | 2 cut(s) | 1121, 1203 |
| SinI | GGWCC | 1 cut(s) | 249 |
| SmiI | ATTTAAAT | 1 cut(s) | 1155 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 243 |
| SmlI | CTYRAG | 4 cut(s) | 11, 523, 590, 755 |
| SmoI | CTYRAG | 4 cut(s) | 11, 523, 590, 755 |
| Sse9I | AATT | 9 cut(s) | 63, 407, 620, 833, 941, 1076, 1081, 1172, 1284 |
| SsiI | CCGC | 1 cut(s) | 558 |
| SspI | AATATT | 1 cut(s) | 382 |
| SspMI | CTAG | 3 cut(s) | 26, 662, 1209 |
| SwaI | ATTTAAAT | 1 cut(s) | 1155 |
| TaaI | ACNGT | 5 cut(s) | 45, 435, 969, 1220, 1315 |
| TaiI | ACGT | 1 cut(s) | 142 |
| TaqII | GACCGA | 1 cut(s) | 72 |
| TasI | AATT | 9 cut(s) | 63, 407, 620, 833, 941, 1076, 1081, 1172, 1284 |
| TatI | WGTACW | 1 cut(s) | 35 |
| TfiI | GAWTC | 3 cut(s) | 112, 658, 1332 |
| TscAI | CASTG | 5 cut(s) | 139, 352, 440, 778, 1126 |
| TseFI | GTSAC | 4 cut(s) | 969, 1019, 1088, 1274 |
| TseI | GCWGC | 1 cut(s) | 177 |
| Tsp45I | GTSAC | 4 cut(s) | 969, 1019, 1088, 1274 |
| TspDTI | ATGAA | 3 cut(s) | 227, 1056, 1131 |
| TspRI | CASTG | 5 cut(s) | 139, 352, 440, 778, 1126 |
| VpaK11BI | GGWCC | 1 cut(s) | 249 |
| VspI | ATTAAT | 1 cut(s) | 1145 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 865 |
| XapI | RAATTY | 2 cut(s) | 941, 1081 |
| XbaI | TCTAGA | 3 cut(s) | 25, 661, 1208 |
| XmiI | GTMKAC | 1 cut(s) | 1180 |
| XmnI | GAANNNNTTC | 1 cut(s) | 294 |
| XspI | CTAG | 3 cut(s) | 26, 662, 1209 |