TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 20 - 202 | 8.2e-57 | TIR domain |
| TIR_2 | PF13676 | 23 - 119 | 7e-15 | TIR domain |
| NB-ARC | PF00931 | 210 - 374 | 2.6e-19 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 444 - 512 | 3e-15 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 760 - 825 | 7.2e-07 | Leucine-rich repeat region |
| C-JID | PF20160 | 904 - 1041 | 2.3e-06 | C-JID domain |
| C-JID | PF20160 | 1080 - 1214 | 8.3e-08 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 900 |
| AccB1I | GGYRCC | 1 cut(s) | 3380 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2793 |
| AccII | CGCG | 1 cut(s) | 2525 |
| AciI | CCGC | 8 cut(s) | 97, 2505, 2523, 2525, 2662, 3093, 3278, 3612 |
| AclI | AACGTT | 1 cut(s) | 1021 |
| AcoI | YGGCCR | 3 cut(s) | 471, 960, 1552 |
| AcuI | CTGAAG | 9 cut(s) | 27, 1073, 1149, 1724, 2318, 2654, 2850, 3387, 3617 |
| AcvI | CACGTG | 1 cut(s) | 3051 |
| AdeI | CACNNNGTG | 1 cut(s) | 273 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 1133, 2793 |
| AflII | CTTAAG | 2 cut(s) | 2951, 3145 |
| AflIII | ACRYGT | 4 cut(s) | 66, 2510, 3050, 3675 |
| AhlI | ACTAGT | 4 cut(s) | 916, 1027, 1424, 3272 |
| AjiI | CACGTC | 3 cut(s) | 33, 67, 430 |
| AjnI | CCWGG | 8 cut(s) | 204, 1549, 2086, 2713, 2839, 2848, 3517, 3569 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 244, 276, 963, 995, 1326, 1358 |
| AleI | CACNNNNGTG | 1 cut(s) | 3501 |
| Alw21I | GWGCWC | 2 cut(s) | 14, 3106 |
| Alw26I | GTCTC | 5 cut(s) | 306, 358, 1218, 2267, 2930 |
| AoxI | GGCC | 5 cut(s) | 390, 471, 960, 1177, 1552 |
| ApeKI | GCWGC | 3 cut(s) | 209, 1867, 2133 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 519, 551 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 607, 1086, 1752 |
| AspLEI | GCGC | 1 cut(s) | 3285 |
| AspS9I | GGNCC | 2 cut(s) | 112, 1742 |
| AsuC2I | CCSGG | 2 cut(s) | 2907, 3378 |
| AsuII | TTCGAA | 2 cut(s) | 50, 3267 |
| AvaII | GGWCC | 2 cut(s) | 112, 1742 |
| AxyI | CCTNAGG | 1 cut(s) | 1650 |
| BaeGI | GKGCMC | 1 cut(s) | 3385 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1411, 1444 |
| BalI | TGGCCA | 2 cut(s) | 473, 1554 |
| BamHI | GGATCC | 3 cut(s) | 349, 2172, 3615 |
| BanI | GGYRCC | 1 cut(s) | 3380 |
| BanII | GRGCYC | 3 cut(s) | 14, 204, 3651 |
| BbrPI | CACGTG | 1 cut(s) | 3051 |
| BbsI | GAAGAC | 5 cut(s) | 27, 414, 704, 978, 2044 |
| Bbv12I | GWGCWC | 2 cut(s) | 14, 3106 |
| BbvI | GCAGC | 3 cut(s) | 196, 1879, 2120 |
| BccI | CCATC | 9 cut(s) | 480, 863, 1307, 1801, 2026, 2618, 3328, 3540, 3683 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 377, 411, 982, 1016, 3257, 3291 |
| BciT130I | CCWGG | 8 cut(s) | 206, 1551, 2088, 2715, 2841, 2850, 3519, 3571 |
| BciVI | GTATCC | 1 cut(s) | 1800 |
| BclI | TGATCA | 1 cut(s) | 1276 |
| BcnI | CCSGG | 2 cut(s) | 2907, 3378 |
| BcoDI | GTCTC | 5 cut(s) | 306, 358, 1218, 2267, 2930 |
| BcuI | ACTAGT | 4 cut(s) | 916, 1027, 1424, 3272 |
| BfmI | CTRYAG | 3 cut(s) | 131, 2611, 2657 |
| BfrI | CTTAAG | 2 cut(s) | 2951, 3145 |
| BfuI | GTATCC | 1 cut(s) | 1800 |
| BisI | GCNGC | 4 cut(s) | 210, 1868, 2134, 2506 |
| BlsI | GCNGC | 4 cut(s) | 211, 1869, 2135, 2507 |
| BmcAI | AGTACT | 1 cut(s) | 1889 |
| Bme18I | GGWCC | 2 cut(s) | 112, 1742 |
| BmgBI | CACGTC | 3 cut(s) | 33, 67, 430 |
| BmgT120I | GGNCC | 2 cut(s) | 112, 1742 |
| BmiI | GGNNCC | 9 cut(s) | 203, 351, 2174, 2474, 2666, 2676, 3382, 3454, 3617 |
| BmrI | ACTGGG | 1 cut(s) | 2916 |
| BmsI | GCATC | 4 cut(s) | 445, 581, 1750, 3429 |
| BmuI | ACTGGG | 1 cut(s) | 2916 |
| BpiI | GAAGAC | 5 cut(s) | 27, 414, 704, 978, 2044 |
| Bpu14I | TTCGAA | 2 cut(s) | 50, 3267 |
| BpuEI | CTTGAG | 2 cut(s) | 1349, 1991 |
| BpuMI | CCSGG | 2 cut(s) | 2907, 3378 |
| Bsa29I | ATCGAT | 1 cut(s) | 3157 |
| BsaAI | YACGTR | 2 cut(s) | 3051, 3330 |
| BsaBI | GATNNNNATC | 1 cut(s) | 933 |
| BsaI | GGTCTC | 1 cut(s) | 1218 |
| BsaJI | CCNNGG | 6 cut(s) | 387, 1228, 2523, 2839, 2848, 3518 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2748, 2778 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 1133, 2793 |
| Bse118I | RCCGGY | 2 cut(s) | 1822, 2253 |
| Bse1I | ACTGG | 5 cut(s) | 954, 980, 2772, 2787, 2922 |
| Bse21I | CCTNAGG | 1 cut(s) | 1650 |
| Bse8I | GATNNNNATC | 1 cut(s) | 933 |
| BseBI | CCWGG | 8 cut(s) | 206, 1551, 2088, 2715, 2841, 2850, 3519, 3571 |
| BseCI | ATCGAT | 1 cut(s) | 3157 |
| BseDI | CCNNGG | 6 cut(s) | 387, 1228, 2523, 2839, 2848, 3518 |
| BseGI | GGATG | 8 cut(s) | 491, 559, 865, 2014, 2464, 3339, 3444, 3694 |
| BseJI | GATNNNNATC | 1 cut(s) | 933 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 1133, 2793 |
| BseNI | ACTGG | 5 cut(s) | 954, 980, 2772, 2787, 2922 |
| BseRI | GAGGAG | 1 cut(s) | 3236 |
| BseSI | GKGCMC | 1 cut(s) | 3385 |
| BseXI | GCAGC | 3 cut(s) | 196, 1879, 2120 |
| Bsh1236I | CGCG | 1 cut(s) | 2525 |
| BshFI | GGCC | 5 cut(s) | 392, 473, 962, 1179, 1554 |
| BshNI | GGYRCC | 1 cut(s) | 3380 |
| BshVI | ATCGAT | 1 cut(s) | 3157 |
| BsiHKAI | GWGCWC | 2 cut(s) | 14, 3106 |
| BsiSI | CCGG | 5 cut(s) | 963, 1823, 2254, 2907, 3377 |
| BslFI | GGGAC | 4 cut(s) | 173, 334, 1592, 2831 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 1133, 2793 |
| BsmAI | GTCTC | 5 cut(s) | 306, 358, 1218, 2267, 2930 |
| BsmFI | GGGAC | 4 cut(s) | 173, 334, 1592, 2831 |
| BsnI | GGCC | 5 cut(s) | 392, 473, 962, 1179, 1554 |
| Bso31I | GGTCTC | 1 cut(s) | 1218 |
| Bsp119I | TTCGAA | 2 cut(s) | 50, 3267 |
| Bsp1286I | GDGCHC | 5 cut(s) | 14, 204, 3106, 3385, 3651 |
| Bsp1407I | TGTACA | 4 cut(s) | 1994, 3108, 3415, 3627 |
| BspACI | CCGC | 8 cut(s) | 97, 2505, 2523, 2525, 2662, 3093, 3278, 3612 |
| BspANI | GGCC | 5 cut(s) | 392, 473, 962, 1179, 1554 |
| BspDI | ATCGAT | 1 cut(s) | 3157 |
| BspFNI | CGCG | 1 cut(s) | 2525 |
| BspHI | TCATGA | 1 cut(s) | 2860 |
| BspLI | GGNNCC | 9 cut(s) | 203, 351, 2174, 2474, 2666, 2676, 3382, 3454, 3617 |
| BspMAI | CTGCAG | 1 cut(s) | 135 |
| BspQI | GCTCTTC | 1 cut(s) | 1092 |
| BspT104I | TTCGAA | 2 cut(s) | 50, 3267 |
| BspT107I | GGYRCC | 1 cut(s) | 3380 |
| BspTI | CTTAAG | 2 cut(s) | 2951, 3145 |
| BspTNI | GGTCTC | 1 cut(s) | 1218 |
| BsrFI | RCCGGY | 2 cut(s) | 1822, 2253 |
| BsrGI | TGTACA | 4 cut(s) | 1994, 3108, 3415, 3627 |
| BsrI | ACTGG | 5 cut(s) | 954, 980, 2772, 2787, 2922 |
| BssAI | RCCGGY | 2 cut(s) | 1822, 2253 |
| BssECI | CCNNGG | 6 cut(s) | 387, 1228, 2523, 2839, 2848, 3518 |
| Bst2UI | CCWGG | 8 cut(s) | 206, 1551, 2088, 2715, 2841, 2850, 3519, 3571 |
| Bst6I | CTCTTC | 3 cut(s) | 1092, 1653, 1809 |
| BstAFI | CTTAAG | 2 cut(s) | 2951, 3145 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 3072 |
| BstAUI | TGTACA | 4 cut(s) | 1994, 3108, 3415, 3627 |
| BstBAI | YACGTR | 2 cut(s) | 3051, 3330 |
| BstBI | TTCGAA | 2 cut(s) | 50, 3267 |
| BstC8I | GCNNGC | 6 cut(s) | 278, 1646, 2213, 2419, 3073, 3592 |
| BstDSI | CCRYGG | 1 cut(s) | 2523 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1131 |
| BstF5I | GGATG | 8 cut(s) | 491, 559, 865, 2014, 2464, 3339, 3444, 3694 |
| BstFNI | CGCG | 1 cut(s) | 2525 |
| BstHHI | GCGC | 1 cut(s) | 3285 |
| BstMAI | GTCTC | 5 cut(s) | 306, 358, 1218, 2267, 2930 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 1413, 1873, 3072 |
| BstNI | CCWGG | 8 cut(s) | 206, 1551, 2088, 2715, 2841, 2850, 3519, 3571 |
| BstNSI | RCATGY | 6 cut(s) | 1359, 2215, 2514, 3075, 3594, 3634 |
| BstSFI | CTRYAG | 3 cut(s) | 131, 2611, 2657 |
| BstSLI | GKGCMC | 1 cut(s) | 3385 |
| BstUI | CGCG | 1 cut(s) | 2525 |
| BstV1I | GCAGC | 3 cut(s) | 196, 1879, 2120 |
| BstV2I | GAAGAC | 5 cut(s) | 27, 414, 704, 978, 2044 |
| BstX2I | RGATCY | 7 cut(s) | 349, 1205, 1912, 2172, 2383, 2557, 3615 |
| BstYI | RGATCY | 7 cut(s) | 349, 1205, 1912, 2172, 2383, 2557, 3615 |
| Bsu15I | ATCGAT | 1 cut(s) | 3157 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1650 |
| BsuI | GTATCC | 1 cut(s) | 1800 |
| BsuRI | GGCC | 5 cut(s) | 392, 473, 962, 1179, 1554 |
| BsuTUI | ATCGAT | 1 cut(s) | 3157 |
| BtgI | CCRYGG | 1 cut(s) | 2523 |
| BtrI | CACGTC | 3 cut(s) | 33, 67, 430 |
| BtsCI | GGATG | 8 cut(s) | 491, 559, 865, 2014, 2464, 3339, 3444, 3694 |
| BtsI | GCAGTG | 2 cut(s) | 140, 240 |
| BtsIMutI | CAGTG | 4 cut(s) | 140, 240, 474, 1283 |
| Cac8I | GCNNGC | 6 cut(s) | 278, 1646, 2213, 2419, 3073, 3592 |
| CciI | TCATGA | 1 cut(s) | 2860 |
| CfoI | GCGC | 1 cut(s) | 3285 |
| Cfr10I | RCCGGY | 2 cut(s) | 1822, 2253 |
| Cfr13I | GGNCC | 2 cut(s) | 112, 1742 |
| Cfr42I | CCGCGG | 1 cut(s) | 2526 |
| ClaI | ATCGAT | 1 cut(s) | 3157 |
| CsiI | ACCWGGT | 1 cut(s) | 3569 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2550, 2585 |
| DraI | TTTAAA | 2 cut(s) | 1291, 2052 |
| DraIII | CACNNNGTG | 1 cut(s) | 273 |
| EaeI | YGGCCR | 3 cut(s) | 471, 960, 1552 |
| Eam1104I | CTCTTC | 3 cut(s) | 1092, 1653, 1809 |
| EarI | CTCTTC | 3 cut(s) | 1092, 1653, 1809 |
| Ecl136II | GAGCTC | 1 cut(s) | 12 |
| Eco147I | AGGCCT | 2 cut(s) | 392, 1179 |
| Eco24I | GRGCYC | 3 cut(s) | 14, 204, 3651 |
| Eco31I | GGTCTC | 1 cut(s) | 1218 |
| Eco47I | GGWCC | 2 cut(s) | 112, 1742 |
| Eco53kI | GAGCTC | 1 cut(s) | 12 |
| Eco57I | CTGAAG | 9 cut(s) | 27, 1073, 1149, 1724, 2318, 2654, 2850, 3387, 3617 |
| Eco72I | CACGTG | 1 cut(s) | 3051 |
| Eco81I | CCTNAGG | 1 cut(s) | 1650 |
| EcoICRI | GAGCTC | 1 cut(s) | 12 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1131 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1742 |
| EcoRI | GAATTC | 2 cut(s) | 2082, 3560 |
| EcoRII | CCWGG | 8 cut(s) | 204, 1549, 2086, 2713, 2839, 2848, 3517, 3569 |
| EcoT22I | ATGCAT | 1 cut(s) | 1494 |
| EcoT38I | GRGCYC | 3 cut(s) | 14, 204, 3651 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1145, 1177 |
| FaqI | GGGAC | 4 cut(s) | 173, 334, 1592, 2831 |
| FauI | CCCGC | 3 cut(s) | 104, 3086, 3605 |
| FauNDI | CATATG | 1 cut(s) | 1640 |
| FbaI | TGATCA | 1 cut(s) | 1276 |
| Fnu4HI | GCNGC | 4 cut(s) | 210, 1868, 2134, 2506 |
| FokI | GGATG | 8 cut(s) | 498, 546, 872, 2001, 2471, 3346, 3451, 3701 |
| FriOI | GRGCYC | 3 cut(s) | 14, 204, 3651 |
| Fsp4HI | GCNGC | 4 cut(s) | 210, 1868, 2134, 2506 |
| GlaI | GCGC | 1 cut(s) | 3284 |
| GluI | GCNGC | 4 cut(s) | 210, 1868, 2134, 2506 |
| HaeIII | GGCC | 5 cut(s) | 392, 473, 962, 1179, 1554 |
| HapII | CCGG | 5 cut(s) | 963, 1823, 2254, 2907, 3377 |
| HhaI | GCGC | 1 cut(s) | 3285 |
| Hin6I | GCGC | 1 cut(s) | 3283 |
| HinP1I | GCGC | 1 cut(s) | 3283 |
| HincII | GTYRAC | 4 cut(s) | 1464, 1902, 2008, 2395 |
| HindII | GTYRAC | 4 cut(s) | 1464, 1902, 2008, 2395 |
| HpaI | GTTAAC | 1 cut(s) | 1464 |
| HpaII | CCGG | 5 cut(s) | 963, 1823, 2254, 2907, 3377 |
| Hpy166II | GTNNAC | 9 cut(s) | 1025, 1464, 1902, 2008, 2395, 2651, 3295, 3418, 3552 |
| Hpy8I | GTNNAC | 9 cut(s) | 1025, 1464, 1902, 2008, 2395, 2651, 3295, 3418, 3552 |
| Hpy99I | CGWCG | 1 cut(s) | 68 |
| HpyCH4IV | ACGT | 9 cut(s) | 32, 66, 429, 1021, 2647, 3050, 3329, 3554, 3675 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 1413, 1873, 3072 |
| HpySE526I | ACGT | 9 cut(s) | 32, 66, 429, 1021, 2647, 3050, 3329, 3554, 3675 |
| HspAI | GCGC | 1 cut(s) | 3283 |
| Ksp22I | TGATCA | 1 cut(s) | 1276 |
| KspAI | GTTAAC | 1 cut(s) | 1464 |
| KspI | CCGCGG | 1 cut(s) | 2526 |
| LguI | GCTCTTC | 1 cut(s) | 1092 |
| LmnI | GCTCC | 9 cut(s) | 17, 207, 378, 1273, 2478, 2825, 3280, 3362, 3458 |
| Lsp1109I | GCAGC | 3 cut(s) | 196, 1879, 2120 |
| LweI | GCATC | 4 cut(s) | 445, 581, 1750, 3429 |
| MabI | ACCWGGT | 1 cut(s) | 3569 |
| MaeII | ACGT | 9 cut(s) | 32, 66, 429, 1021, 2647, 3050, 3329, 3554, 3675 |
| MaeIII | GTNAC | 2 cut(s) | 1003, 2518 |
| MfeI | CAATTG | 2 cut(s) | 213, 2480 |
| MflI | RGATCY | 7 cut(s) | 349, 1205, 1912, 2172, 2383, 2557, 3615 |
| MhlI | GDGCHC | 5 cut(s) | 14, 204, 3106, 3385, 3651 |
| MlsI | TGGCCA | 2 cut(s) | 473, 1554 |
| MluNI | TGGCCA | 2 cut(s) | 473, 1554 |
| MlyI | GAGTC | 3 cut(s) | 590, 1544, 2269 |
| MmeI | TCCRAC | 6 cut(s) | 580, 1082, 2500, 2879, 2937, 3416 |
| Mox20I | TGGCCA | 2 cut(s) | 473, 1554 |
| Mph1103I | ATGCAT | 1 cut(s) | 1494 |
| MroXI | GAANNNNTTC | 3 cut(s) | 607, 1086, 1752 |
| MscI | TGGCCA | 2 cut(s) | 473, 1554 |
| MslI | CAYNNNNRTG | 4 cut(s) | 1958, 2313, 3501, 3544 |
| Msp20I | TGGCCA | 2 cut(s) | 473, 1554 |
| MspA1I | CMGCKG | 2 cut(s) | 2525, 2662 |
| MspCI | CTTAAG | 2 cut(s) | 2951, 3145 |
| MspI | CCGG | 5 cut(s) | 963, 1823, 2254, 2907, 3377 |
| MunI | CAATTG | 2 cut(s) | 213, 2480 |
| MvaI | CCWGG | 8 cut(s) | 206, 1551, 2088, 2715, 2841, 2850, 3519, 3571 |
| MvnI | CGCG | 1 cut(s) | 2525 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 1413, 1873, 3072 |
| NciI | CCSGG | 2 cut(s) | 2907, 3378 |
| NdeI | CATATG | 1 cut(s) | 1640 |
| NlaIV | GGNNCC | 9 cut(s) | 203, 351, 2174, 2474, 2666, 2676, 3382, 3454, 3617 |
| NmeAIII | GCCGAG | 1 cut(s) | 412 |
| NmuCI | GTSAC | 1 cut(s) | 2518 |
| NsiI | ATGCAT | 1 cut(s) | 1494 |
| NspI | RCATGY | 6 cut(s) | 1359, 2215, 2514, 3075, 3594, 3634 |
| NspV | TTCGAA | 2 cut(s) | 50, 3267 |
| OliI | CACNNNNGTG | 1 cut(s) | 3501 |
| PaeI | GCATGC | 3 cut(s) | 2215, 3075, 3594 |
| PagI | TCATGA | 1 cut(s) | 2860 |
| PceI | AGGCCT | 2 cut(s) | 392, 1179 |
| PciI | ACATGT | 1 cut(s) | 2510 |
| PciSI | GCTCTTC | 1 cut(s) | 1092 |
| PdmI | GAANNNNTTC | 3 cut(s) | 607, 1086, 1752 |
| PfeI | GAWTC | 8 cut(s) | 144, 491, 608, 1198, 1672, 2105, 2902, 3154 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2793 |
| PfoI | TCCNGGA | 1 cut(s) | 2713 |
| PkrI | GCNGC | 4 cut(s) | 211, 1869, 2135, 2507 |
| PleI | GAGTC | 3 cut(s) | 589, 1543, 2268 |
| PmaCI | CACGTG | 1 cut(s) | 3051 |
| PmlI | CACGTG | 1 cut(s) | 3051 |
| PpsI | GAGTC | 3 cut(s) | 589, 1543, 2268 |
| Ppu21I | YACGTR | 2 cut(s) | 3051, 3330 |
| PpuMI | RGGWCCY | 1 cut(s) | 1742 |
| PscI | ACATGT | 1 cut(s) | 2510 |
| PsiI | TTATAA | 1 cut(s) | 900 |
| Psp124BI | GAGCTC | 1 cut(s) | 14 |
| Psp1406I | AACGTT | 1 cut(s) | 1021 |
| Psp5II | RGGWCCY | 1 cut(s) | 1742 |
| Psp6I | CCWGG | 8 cut(s) | 204, 1549, 2086, 2713, 2839, 2848, 3517, 3569 |
| PspCI | CACGTG | 1 cut(s) | 3051 |
| PspGI | CCWGG | 8 cut(s) | 204, 1549, 2086, 2713, 2839, 2848, 3517, 3569 |
| PspN4I | GGNNCC | 9 cut(s) | 203, 351, 2174, 2474, 2666, 2676, 3382, 3454, 3617 |
| PspPI | GGNCC | 2 cut(s) | 112, 1742 |
| PspPPI | RGGWCCY | 1 cut(s) | 1742 |
| PsrI | GAACNNNNNNTAC | 4 cut(s) | 3399, 3431, 3498, 3530 |
| PstI | CTGCAG | 1 cut(s) | 135 |
| PsuI | RGATCY | 7 cut(s) | 349, 1205, 1912, 2172, 2383, 2557, 3615 |
| RseI | CAYNNNNRTG | 4 cut(s) | 1958, 2313, 3501, 3544 |
| SacI | GAGCTC | 1 cut(s) | 14 |
| SacII | CCGCGG | 1 cut(s) | 2526 |
| SapI | GCTCTTC | 1 cut(s) | 1092 |
| SatI | GCNGC | 4 cut(s) | 210, 1868, 2134, 2506 |
| Sau96I | GGNCC | 2 cut(s) | 112, 1742 |
| ScaI | AGTACT | 1 cut(s) | 1889 |
| SchI | GAGTC | 3 cut(s) | 590, 1544, 2269 |
| SduI | GDGCHC | 5 cut(s) | 14, 204, 3106, 3385, 3651 |
| SexAI | ACCWGGT | 1 cut(s) | 3569 |
| SfaNI | GCATC | 4 cut(s) | 445, 581, 1750, 3429 |
| SfcI | CTRYAG | 3 cut(s) | 131, 2611, 2657 |
| Sfr303I | CCGCGG | 1 cut(s) | 2526 |
| SfuI | TTCGAA | 2 cut(s) | 50, 3267 |
| SgrBI | CCGCGG | 1 cut(s) | 2526 |
| SinI | GGWCC | 2 cut(s) | 112, 1742 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 1958, 2313, 3501, 3544 |
| SmlI | CTYRAG | 4 cut(s) | 1364, 1970, 2951, 3145 |
| SmoI | CTYRAG | 4 cut(s) | 1364, 1970, 2951, 3145 |
| SpeI | ACTAGT | 4 cut(s) | 916, 1027, 1424, 3272 |
| SphI | GCATGC | 3 cut(s) | 2215, 3075, 3594 |
| SseBI | AGGCCT | 2 cut(s) | 392, 1179 |
| SsiI | CCGC | 8 cut(s) | 97, 2505, 2523, 2525, 2662, 3093, 3278, 3612 |
| SstI | GAGCTC | 1 cut(s) | 14 |
| StuI | AGGCCT | 2 cut(s) | 392, 1179 |
| TaiI | ACGT | 9 cut(s) | 35, 69, 432, 1024, 2650, 3053, 3332, 3557, 3678 |
| TaqII | GACCGA | 2 cut(s) | 1242, 3318 |
| TatI | WGTACW | 8 cut(s) | 556, 1244, 1594, 1887, 1994, 3108, 3415, 3627 |
| TauI | GCSGC | 1 cut(s) | 2508 |
| TfiI | GAWTC | 8 cut(s) | 144, 491, 608, 1198, 1672, 2105, 2902, 3154 |
| TscAI | CASTG | 4 cut(s) | 140, 240, 474, 1290 |
| TseFI | GTSAC | 1 cut(s) | 2518 |
| TseI | GCWGC | 3 cut(s) | 209, 1867, 2133 |
| Tsp45I | GTSAC | 1 cut(s) | 2518 |
| TspGWI | ACGGA | 4 cut(s) | 125, 1517, 2185, 3608 |
| TspRI | CASTG | 4 cut(s) | 140, 240, 474, 1290 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2793 |
| Vha464I | CTTAAG | 2 cut(s) | 2951, 3145 |
| VpaK11BI | GGWCC | 2 cut(s) | 112, 1742 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1131 |
| XceI | RCATGY | 6 cut(s) | 1359, 2215, 2514, 3075, 3594, 3634 |
| XmnI | GAANNNNTTC | 3 cut(s) | 607, 1086, 1752 |
| ZrmI | AGTACT | 1 cut(s) | 1889 |
| Zsp2I | ATGCAT | 1 cut(s) | 1494 |