TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 18 - 193 | 9.2e-53 | TIR domain |
| TIR_2 | PF13676 | 21 - 129 | 5.3e-16 | TIR domain |
| LRR_14 | PF23598 | 374 - 483 | 6.2e-14 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 403 - 488 | 3.5e-07 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 471 - 532 | 9.9e-08 | Leucine-rich repeat region |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 863, 887 |
| AatII | GACGTC | 1 cut(s) | 642 |
| AccBSI | CCGCTC | 1 cut(s) | 698 |
| AccI | GTMKAC | 1 cut(s) | 1923 |
| AciI | CCGC | 3 cut(s) | 643, 669, 698 |
| AclWI | GGATC | 5 cut(s) | 152, 338, 818, 846, 859 |
| AcsI | RAATTY | 6 cut(s) | 288, 481, 585, 722, 728, 1333 |
| AcuI | CTGAAG | 1 cut(s) | 1767 |
| AcyI | GRCGYC | 1 cut(s) | 639 |
| AfaI | GTAC | 3 cut(s) | 357, 924, 1200 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 848, 864, 1669 |
| AflII | CTTAAG | 2 cut(s) | 1819, 2072 |
| AhlI | ACTAGT | 1 cut(s) | 280 |
| AjnI | CCWGG | 1 cut(s) | 2161 |
| Alw21I | GWGCWC | 3 cut(s) | 8, 973, 2050 |
| Alw26I | GTCTC | 1 cut(s) | 1218 |
| Alw44I | GTGCAC | 1 cut(s) | 969 |
| AlwI | GGATC | 5 cut(s) | 152, 338, 818, 846, 859 |
| AoxI | GGCC | 1 cut(s) | 825 |
| ApaLI | GTGCAC | 1 cut(s) | 969 |
| ApeKI | GCWGC | 4 cut(s) | 203, 322, 601, 1878 |
| ApoI | RAATTY | 6 cut(s) | 288, 481, 585, 722, 728, 1333 |
| AseI | ATTAAT | 3 cut(s) | 1014, 1787, 2103 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1860 |
| AsuC2I | CCSGG | 1 cut(s) | 1761 |
| AsuHPI | GGTGA | 3 cut(s) | 92, 1599, 1775 |
| BaeGI | GKGCMC | 2 cut(s) | 973, 1545 |
| BamHI | GGATCC | 1 cut(s) | 851 |
| BauI | CACGAG | 1 cut(s) | 717 |
| BbsI | GAAGAC | 3 cut(s) | 896, 994, 1773 |
| Bbv12I | GWGCWC | 3 cut(s) | 8, 973, 2050 |
| BbvI | GCAGC | 4 cut(s) | 190, 309, 613, 1865 |
| BccI | CCATC | 3 cut(s) | 31, 1915, 2132 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1662, 1696, 2037, 2071 |
| BciT130I | CCWGG | 1 cut(s) | 2163 |
| BcnI | CCSGG | 1 cut(s) | 1761 |
| BcoDI | GTCTC | 1 cut(s) | 1218 |
| BcuI | ACTAGT | 1 cut(s) | 280 |
| BfaI | CTAG | 7 cut(s) | 281, 578, 779, 983, 1314, 1721, 2148 |
| BfrI | CTTAAG | 2 cut(s) | 1819, 2072 |
| BglII | AGATCT | 2 cut(s) | 1723, 1798 |
| BisI | GCNGC | 4 cut(s) | 204, 323, 602, 1879 |
| BlsI | GCNGC | 4 cut(s) | 205, 324, 603, 1880 |
| BmcAI | AGTACT | 1 cut(s) | 924 |
| Bme1390I | CCNGG | 2 cut(s) | 1761, 2163 |
| BmiI | GGNNCC | 2 cut(s) | 853, 1996 |
| BmrFI | CCNGG | 2 cut(s) | 1761, 2163 |
| BmrI | ACTGGG | 2 cut(s) | 935, 983 |
| BmsI | GCATC | 4 cut(s) | 263, 1763, 2105, 2153 |
| BmuI | ACTGGG | 2 cut(s) | 935, 983 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1272 |
| BpiI | GAAGAC | 3 cut(s) | 896, 994, 1773 |
| BplI | GAGNNNNNCTC | 8 cut(s) | 211, 243, 698, 730, 700, 732, 1012, 1044 |
| BpmI | CTGGAG | 1 cut(s) | 174 |
| BpuEI | CTTGAG | 2 cut(s) | 577, 1441 |
| BpuMI | CCSGG | 1 cut(s) | 1761 |
| BsaAI | YACGTR | 2 cut(s) | 1202, 1991 |
| BsaBI | GATNNNNATC | 2 cut(s) | 342, 1797 |
| BsaHI | GRCGYC | 1 cut(s) | 639 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 848, 864, 1669 |
| Bse1I | ACTGG | 3 cut(s) | 605, 930, 978 |
| Bse3DI | GCAATG | 1 cut(s) | 1761 |
| Bse8I | GATNNNNATC | 2 cut(s) | 342, 1797 |
| BseBI | CCWGG | 1 cut(s) | 2163 |
| BseGI | GGATG | 7 cut(s) | 160, 280, 421, 640, 1598, 1778, 2168 |
| BseJI | GATNNNNATC | 2 cut(s) | 342, 1797 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 848, 864, 1669 |
| BseMI | GCAATG | 1 cut(s) | 1761 |
| BseMII | CTCAG | 5 cut(s) | 59, 59, 486, 1010, 1816 |
| BseNI | ACTGG | 3 cut(s) | 605, 930, 978 |
| BseRI | GAGGAG | 3 cut(s) | 33, 1307, 1537 |
| BseSI | GKGCMC | 2 cut(s) | 973, 1545 |
| BseXI | GCAGC | 4 cut(s) | 190, 309, 613, 1865 |
| BshFI | GGCC | 1 cut(s) | 827 |
| BsiHKAI | GWGCWC | 3 cut(s) | 8, 973, 2050 |
| BsiSI | CCGG | 2 cut(s) | 1670, 1761 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 848, 864, 1669 |
| BsmAI | GTCTC | 1 cut(s) | 1218 |
| BsmI | GAATGC | 2 cut(s) | 302, 1705 |
| BsnI | GGCC | 1 cut(s) | 827 |
| Bsp1286I | GDGCHC | 4 cut(s) | 8, 973, 1545, 2050 |
| Bsp143I | GATC | 7 cut(s) | 157, 343, 810, 851, 949, 1723, 1798 |
| BspACI | CCGC | 3 cut(s) | 643, 669, 698 |
| BspANI | GGCC | 1 cut(s) | 827 |
| BspCNI | CTCAG | 5 cut(s) | 58, 60, 485, 1011, 1815 |
| BspHI | TCATGA | 2 cut(s) | 397, 844 |
| BspLI | GGNNCC | 2 cut(s) | 853, 1996 |
| BspPI | GGATC | 5 cut(s) | 152, 338, 818, 846, 859 |
| BspTI | CTTAAG | 2 cut(s) | 1819, 2072 |
| BsrBI | CCGCTC | 1 cut(s) | 698 |
| BsrDI | GCAATG | 1 cut(s) | 1761 |
| BsrI | ACTGG | 3 cut(s) | 605, 930, 978 |
| BssMI | GATC | 7 cut(s) | 157, 343, 810, 851, 949, 1723, 1798 |
| BssNI | GRCGYC | 1 cut(s) | 639 |
| BssSI | CACGAG | 1 cut(s) | 717 |
| Bst2BI | CACGAG | 1 cut(s) | 717 |
| Bst2UI | CCWGG | 1 cut(s) | 2163 |
| Bst4CI | ACNGT | 4 cut(s) | 968, 1150, 2009, 2019 |
| Bst6I | CTCTTC | 1 cut(s) | 940 |
| BstACI | GRCGYC | 1 cut(s) | 639 |
| BstAFI | CTTAAG | 2 cut(s) | 1819, 2072 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 200 |
| BstBAI | YACGTR | 2 cut(s) | 1202, 1991 |
| BstC8I | GCNNGC | 2 cut(s) | 1192, 1883 |
| BstDEI | CTNAG | 7 cut(s) | 45, 68, 472, 1019, 1727, 1802, 1848 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 846 |
| BstF5I | GGATG | 7 cut(s) | 160, 280, 421, 640, 1598, 1778, 2168 |
| BstKTI | GATC | 7 cut(s) | 160, 346, 813, 854, 952, 1726, 1801 |
| BstMAI | GTCTC | 1 cut(s) | 1218 |
| BstMBI | GATC | 7 cut(s) | 157, 343, 810, 851, 949, 1723, 1798 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 200, 314, 1404, 2097 |
| BstNI | CCWGG | 1 cut(s) | 2163 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1272 |
| BstSCI | CCNGG | 2 cut(s) | 1759, 2161 |
| BstSLI | GKGCMC | 2 cut(s) | 973, 1545 |
| BstV1I | GCAGC | 4 cut(s) | 190, 309, 613, 1865 |
| BstV2I | GAAGAC | 3 cut(s) | 896, 994, 1773 |
| BstX2I | RGATCY | 4 cut(s) | 810, 851, 1723, 1798 |
| BstYI | RGATCY | 4 cut(s) | 810, 851, 1723, 1798 |
| BsuRI | GGCC | 1 cut(s) | 827 |
| BtgZI | GCGATG | 2 cut(s) | 2040, 2128 |
| BtsCI | GGATG | 7 cut(s) | 160, 280, 421, 640, 1598, 1778, 2168 |
| BtsI | GCAGTG | 3 cut(s) | 117, 1201, 1414 |
| BtsIMutI | CAGTG | 6 cut(s) | 53, 117, 971, 973, 1201, 1414 |
| Cac8I | GCNNGC | 2 cut(s) | 1192, 1883 |
| CciI | TCATGA | 2 cut(s) | 397, 844 |
| CseI | GACGC | 1 cut(s) | 1934 |
| Csp6I | GTAC | 3 cut(s) | 356, 923, 1199 |
| CviAII | CATG | 9 cut(s) | 264, 271, 301, 398, 845, 941, 1372, 1617, 1913 |
| CviQI | GTAC | 3 cut(s) | 356, 923, 1199 |
| DdeI | CTNAG | 7 cut(s) | 45, 68, 472, 1019, 1727, 1802, 1848 |
| DpnI | GATC | 7 cut(s) | 159, 345, 812, 853, 951, 1725, 1800 |
| DpnII | GATC | 7 cut(s) | 157, 343, 810, 851, 949, 1723, 1798 |
| Eam1104I | CTCTTC | 1 cut(s) | 940 |
| EarI | CTCTTC | 1 cut(s) | 940 |
| Eco57I | CTGAAG | 1 cut(s) | 1767 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 846 |
| EcoRI | GAATTC | 2 cut(s) | 288, 481 |
| EcoRII | CCWGG | 1 cut(s) | 2161 |
| EcoT22I | ATGCAT | 2 cut(s) | 256, 302 |
| FaeI | CATG | 9 cut(s) | 267, 274, 304, 401, 848, 944, 1375, 1620, 1916 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 783, 815 |
| FatI | CATG | 9 cut(s) | 263, 270, 300, 397, 844, 940, 1371, 1616, 1912 |
| FauI | CCCGC | 1 cut(s) | 662 |
| FblI | GTMKAC | 1 cut(s) | 1923 |
| Fnu4HI | GCNGC | 4 cut(s) | 204, 323, 602, 1879 |
| FokI | GGATG | 7 cut(s) | 167, 287, 428, 647, 1605, 1785, 2155 |
| Fsp4HI | GCNGC | 4 cut(s) | 204, 323, 602, 1879 |
| FspBI | CTAG | 7 cut(s) | 281, 578, 779, 983, 1314, 1721, 2148 |
| GluI | GCNGC | 4 cut(s) | 204, 323, 602, 1879 |
| GsuI | CTGGAG | 1 cut(s) | 174 |
| HaeIII | GGCC | 1 cut(s) | 827 |
| HapII | CCGG | 2 cut(s) | 1670, 1761 |
| HgaI | GACGC | 1 cut(s) | 1934 |
| Hin1I | GRCGYC | 1 cut(s) | 639 |
| Hin1II | CATG | 9 cut(s) | 267, 274, 304, 401, 848, 944, 1375, 1620, 1916 |
| HincII | GTYRAC | 4 cut(s) | 261, 1042, 1252, 2005 |
| HindII | GTYRAC | 4 cut(s) | 261, 1042, 1252, 2005 |
| HindIII | AAGCTT | 4 cut(s) | 1034, 1508, 1850, 1883 |
| HpaI | GTTAAC | 2 cut(s) | 1252, 2005 |
| HpaII | CCGG | 2 cut(s) | 1670, 1761 |
| HphI | GGTGA | 3 cut(s) | 92, 1599, 1775 |
| Hpy166II | GTNNAC | 7 cut(s) | 261, 971, 1042, 1199, 1252, 1924, 2005 |
| Hpy188I | TCNGA | 9 cut(s) | 69, 584, 838, 1020, 1305, 1431, 1747, 1890, 2023 |
| Hpy8I | GTNNAC | 7 cut(s) | 261, 971, 1042, 1199, 1252, 1924, 2005 |
| HpyAV | CCTTC | 9 cut(s) | 45, 429, 749, 817, 842, 1085, 1346, 1409, 2129 |
| HpyCH4III | ACNGT | 4 cut(s) | 968, 1150, 2009, 2019 |
| HpyCH4IV | ACGT | 3 cut(s) | 639, 1201, 1990 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 200, 314, 1404, 2097 |
| HpyF3I | CTNAG | 7 cut(s) | 45, 68, 472, 1019, 1727, 1802, 1848 |
| HpySE526I | ACGT | 3 cut(s) | 639, 1201, 1990 |
| Hsp92I | GRCGYC | 1 cut(s) | 639 |
| Hsp92II | CATG | 9 cut(s) | 267, 274, 304, 401, 848, 944, 1375, 1620, 1916 |
| KspAI | GTTAAC | 2 cut(s) | 1252, 2005 |
| Kzo9I | GATC | 7 cut(s) | 157, 343, 810, 851, 949, 1723, 1798 |
| LmnI | GCTCC | 2 cut(s) | 1294, 2141 |
| Lsp1109I | GCAGC | 4 cut(s) | 190, 309, 613, 1865 |
| LweI | GCATC | 4 cut(s) | 263, 1763, 2105, 2153 |
| MaeI | CTAG | 7 cut(s) | 281, 578, 779, 983, 1314, 1721, 2148 |
| MaeII | ACGT | 3 cut(s) | 639, 1201, 1990 |
| MaeIII | GTNAC | 3 cut(s) | 1022, 1605, 1730 |
| MalI | GATC | 7 cut(s) | 159, 345, 812, 853, 951, 1725, 1800 |
| MbiI | CCGCTC | 1 cut(s) | 698 |
| MboI | GATC | 7 cut(s) | 157, 343, 810, 851, 949, 1723, 1798 |
| MboII | GAAGA | 8 cut(s) | 224, 413, 896, 957, 999, 1760, 1773, 1853 |
| MfeI | CAATTG | 1 cut(s) | 207 |
| MflI | RGATCY | 4 cut(s) | 810, 851, 1723, 1798 |
| MhlI | GDGCHC | 4 cut(s) | 8, 973, 1545, 2050 |
| MlyI | GAGTC | 2 cut(s) | 1030, 1613 |
| MmeI | TCCRAC | 3 cut(s) | 562, 1570, 2001 |
| Mph1103I | ATGCAT | 2 cut(s) | 256, 302 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1860 |
| MspCI | CTTAAG | 2 cut(s) | 1819, 2072 |
| MspI | CCGG | 2 cut(s) | 1670, 1761 |
| MspR9I | CCNGG | 2 cut(s) | 1761, 2163 |
| MunI | CAATTG | 1 cut(s) | 207 |
| Mva1269I | GAATGC | 2 cut(s) | 302, 1705 |
| MvaI | CCWGG | 1 cut(s) | 2163 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 200, 314, 1404, 2097 |
| NciI | CCSGG | 1 cut(s) | 1761 |
| NdeII | GATC | 7 cut(s) | 157, 343, 810, 851, 949, 1723, 1798 |
| NlaIII | CATG | 9 cut(s) | 267, 274, 304, 401, 848, 944, 1375, 1620, 1916 |
| NlaIV | GGNNCC | 2 cut(s) | 853, 1996 |
| NmuCI | GTSAC | 3 cut(s) | 1022, 1605, 1730 |
| NsiI | ATGCAT | 2 cut(s) | 256, 302 |
| PagI | TCATGA | 2 cut(s) | 397, 844 |
| PctI | GAATGC | 2 cut(s) | 302, 1705 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1860 |
| PfeI | GAWTC | 9 cut(s) | 138, 215, 500, 711, 878, 1078, 1174, 1903, 2179 |
| PkrI | GCNGC | 4 cut(s) | 205, 324, 603, 1880 |
| PleI | GAGTC | 2 cut(s) | 1029, 1612 |
| PpsI | GAGTC | 2 cut(s) | 1029, 1612 |
| Ppu21I | YACGTR | 2 cut(s) | 1202, 1991 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1272 |
| PshBI | ATTAAT | 3 cut(s) | 1014, 1787, 2103 |
| PsiI | TTATAA | 2 cut(s) | 863, 887 |
| Psp6I | CCWGG | 1 cut(s) | 2161 |
| PspGI | CCWGG | 1 cut(s) | 2161 |
| PspN4I | GGNNCC | 2 cut(s) | 853, 1996 |
| PsuI | RGATCY | 4 cut(s) | 810, 851, 1723, 1798 |
| RsaI | GTAC | 3 cut(s) | 357, 924, 1200 |
| RsaNI | GTAC | 3 cut(s) | 356, 923, 1199 |
| SatI | GCNGC | 4 cut(s) | 204, 323, 602, 1879 |
| Sau3AI | GATC | 7 cut(s) | 157, 343, 810, 851, 949, 1723, 1798 |
| ScaI | AGTACT | 1 cut(s) | 924 |
| SchI | GAGTC | 2 cut(s) | 1030, 1613 |
| ScrFI | CCNGG | 2 cut(s) | 1761, 2163 |
| SduI | GDGCHC | 4 cut(s) | 8, 973, 1545, 2050 |
| SfaNI | GCATC | 4 cut(s) | 263, 1763, 2105, 2153 |
| SmlI | CTYRAG | 4 cut(s) | 592, 1456, 1819, 2072 |
| SmoI | CTYRAG | 4 cut(s) | 592, 1456, 1819, 2072 |
| SpeI | ACTAGT | 1 cut(s) | 280 |
| SsiI | CCGC | 3 cut(s) | 643, 669, 698 |
| SspMI | CTAG | 7 cut(s) | 281, 578, 779, 983, 1314, 1721, 2148 |
| StyD4I | CCNGG | 2 cut(s) | 1759, 2161 |
| TaaI | ACNGT | 4 cut(s) | 968, 1150, 2009, 2019 |
| TaiI | ACGT | 3 cut(s) | 642, 1204, 1993 |
| TaqI | TCGA | 4 cut(s) | 218, 342, 1074, 2182 |
| TatI | WGTACW | 1 cut(s) | 922 |
| TfiI | GAWTC | 9 cut(s) | 138, 215, 500, 711, 878, 1078, 1174, 1903, 2179 |
| TscAI | CASTG | 6 cut(s) | 53, 124, 973, 978, 1201, 1414 |
| TseFI | GTSAC | 3 cut(s) | 1022, 1605, 1730 |
| TseI | GCWGC | 4 cut(s) | 203, 322, 601, 1878 |
| Tsp45I | GTSAC | 3 cut(s) | 1022, 1605, 1730 |
| TspRI | CASTG | 6 cut(s) | 53, 124, 973, 978, 1201, 1414 |
| Vha464I | CTTAAG | 2 cut(s) | 1819, 2072 |
| VneI | GTGCAC | 1 cut(s) | 969 |
| VspI | ATTAAT | 3 cut(s) | 1014, 1787, 2103 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 846 |
| XapI | RAATTY | 6 cut(s) | 288, 481, 585, 722, 728, 1333 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1914 |
| XmiI | GTMKAC | 1 cut(s) | 1923 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1860 |
| XspI | CTAG | 7 cut(s) | 281, 578, 779, 983, 1314, 1721, 2148 |
| ZraI | GACGTC | 1 cut(s) | 640 |
| ZrmI | AGTACT | 1 cut(s) | 924 |
| Zsp2I | ATGCAT | 2 cut(s) | 256, 302 |