TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 29 - 198 | 2.1e-56 | TIR domain |
| TIR_2 | PF13676 | 31 - 128 | 1.3e-15 | TIR domain |
| NB-ARC | PF00931 | 222 - 380 | 1.6e-21 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 448 - 516 | 4.9e-17 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_13 | PF23286 | 706 - 815 | 2e-12 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 735 - 830 | 9.4e-10 | Leucine-rich repeat region |
| C-JID | PF20160 | 1009 - 1146 | 8e-06 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1025 |
| Acc65I | GGTACC | 1 cut(s) | 584 |
| AccB1I | GGYRCC | 2 cut(s) | 584, 3413 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 3281, 4199 |
| AccBSI | CCGCTC | 1 cut(s) | 1239 |
| AccI | GTMKAC | 3 cut(s) | 3421, 3589, 3859 |
| AccII | CGCG | 1 cut(s) | 1404 |
| AccIII | TCCGGA | 1 cut(s) | 1666 |
| AciI | CCGC | 7 cut(s) | 121, 751, 910, 1239, 3311, 3773, 3841 |
| AclI | AACGTT | 1 cut(s) | 3242 |
| AclWI | GGATC | 4 cut(s) | 371, 1025, 2286, 3590 |
| AcoI | YGGCCR | 1 cut(s) | 495 |
| AcsI | RAATTY | 7 cut(s) | 168, 539, 1731, 1828, 1963, 2804, 3884 |
| AcuI | CTGAAG | 6 cut(s) | 163, 510, 1502, 2111, 2492, 3656 |
| AcvI | CACGTG | 1 cut(s) | 4019 |
| AdeI | CACNNNGTG | 1 cut(s) | 3722 |
| AfeI | AGCGCT | 1 cut(s) | 2903 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 1275, 2499, 2724, 3119, 3281, 4199 |
| AflII | CTTAAG | 2 cut(s) | 97, 2608 |
| AflIII | ACRYGT | 1 cut(s) | 1860 |
| AhlI | ACTAGT | 1 cut(s) | 3167 |
| AjnI | CCWGG | 5 cut(s) | 290, 1564, 3570, 3598, 4086 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 979, 1011 |
| AleI | CACNNNNGTG | 1 cut(s) | 4107 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 3370, 3402 |
| Alw21I | GWGCWC | 7 cut(s) | 2155, 2507, 2790, 2992, 3356, 4104, 4212 |
| Alw26I | GTCTC | 4 cut(s) | 907, 1949, 2299, 3840 |
| Alw44I | GTGCAC | 4 cut(s) | 2151, 2503, 3352, 4100 |
| AlwI | GGATC | 4 cut(s) | 371, 1025, 2286, 3590 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2779 |
| Ama87I | CYCGRG | 1 cut(s) | 4233 |
| Aor13HI | TCCGGA | 1 cut(s) | 1666 |
| Aor51HI | AGCGCT | 1 cut(s) | 2903 |
| AoxI | GGCC | 5 cut(s) | 495, 622, 1080, 1198, 2864 |
| ApaLI | GTGCAC | 4 cut(s) | 2151, 2503, 3352, 4100 |
| ApeKI | GCWGC | 6 cut(s) | 479, 1869, 2361, 3057, 3060, 3827 |
| ApoI | RAATTY | 7 cut(s) | 168, 539, 1731, 1828, 1963, 2804, 3884 |
| AseI | ATTAAT | 1 cut(s) | 2250 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 1130, 1539, 2842, 3669 |
| Asp718I | GGTACC | 1 cut(s) | 584 |
| AspLEI | GCGC | 2 cut(s) | 1575, 2904 |
| AspS9I | GGNCC | 5 cut(s) | 748, 1226, 1975, 2653, 3224 |
| AsuC2I | CCSGG | 1 cut(s) | 1972 |
| AsuHPI | GGTGA | 5 cut(s) | 122, 166, 2021, 2195, 3412 |
| AsuII | TTCGAA | 1 cut(s) | 1736 |
| AsuNHI | GCTAGC | 1 cut(s) | 3023 |
| AvaI | CYCGRG | 1 cut(s) | 4233 |
| AvaII | GGWCC | 5 cut(s) | 748, 1226, 1975, 2653, 3224 |
| BaeGI | GKGCMC | 6 cut(s) | 2155, 2507, 3356, 3418, 3923, 4104 |
| BalI | TGGCCA | 1 cut(s) | 497 |
| BanI | GGYRCC | 2 cut(s) | 584, 3413 |
| BanII | GRGCYC | 3 cut(s) | 1761, 2790, 4212 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1662, 1694 |
| BauI | CACGAG | 1 cut(s) | 3191 |
| BbrPI | CACGTG | 1 cut(s) | 4019 |
| Bbv12I | GWGCWC | 7 cut(s) | 2155, 2507, 2790, 2992, 3356, 4104, 4212 |
| BbvI | GCAGC | 6 cut(s) | 466, 1881, 2348, 3069, 3072, 3814 |
| BccI | CCATC | 9 cut(s) | 388, 637, 694, 1325, 2041, 2210, 2624, 2726, 2995 |
| BceAI | ACGGC | 3 cut(s) | 3097, 3729, 4001 |
| BciT130I | CCWGG | 5 cut(s) | 292, 1566, 3572, 3600, 4088 |
| BciVI | GTATCC | 2 cut(s) | 109, 3116 |
| BclI | TGATCA | 2 cut(s) | 427, 2848 |
| BcnI | CCSGG | 1 cut(s) | 1972 |
| BcoDI | GTCTC | 4 cut(s) | 907, 1949, 2299, 3840 |
| BcuI | ACTAGT | 1 cut(s) | 3167 |
| BfaI | CTAG | 8 cut(s) | 818, 1839, 2258, 2603, 3024, 3168, 3375, 4316 |
| BfoI | RGCGCY | 1 cut(s) | 2905 |
| BfrI | CTTAAG | 2 cut(s) | 97, 2608 |
| BfuI | GTATCC | 2 cut(s) | 109, 3116 |
| BglII | AGATCT | 1 cut(s) | 1989 |
| BisI | GCNGC | 6 cut(s) | 480, 1870, 2362, 3058, 3061, 3828 |
| BlsI | GCNGC | 6 cut(s) | 481, 1871, 2363, 3059, 3062, 3829 |
| BmcAI | AGTACT | 1 cut(s) | 4231 |
| Bme1390I | CCNGG | 6 cut(s) | 292, 1566, 1972, 3572, 3600, 4088 |
| Bme18I | GGWCC | 5 cut(s) | 748, 1226, 1975, 2653, 3224 |
| BmeT110I | CYCGRG | 1 cut(s) | 4233 |
| BmgT120I | GGNCC | 5 cut(s) | 748, 1226, 1975, 2653, 3224 |
| BmiI | GGNNCC | 6 cut(s) | 586, 1228, 1976, 1977, 2960, 3415 |
| BmrFI | CCNGG | 6 cut(s) | 292, 1566, 1972, 3572, 3600, 4088 |
| BmrI | ACTGGG | 1 cut(s) | 3777 |
| BmsI | GCATC | 5 cut(s) | 1494, 1624, 2439, 3322, 4040 |
| BmtI | GCTAGC | 1 cut(s) | 3027 |
| BmuI | ACTGGG | 1 cut(s) | 3777 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2610 |
| BpmI | CTGGAG | 2 cut(s) | 256, 3621 |
| Bpu14I | TTCGAA | 1 cut(s) | 1736 |
| BpuEI | CTTGAG | 5 cut(s) | 218, 1130, 1291, 2006, 2144 |
| BpuMI | CCSGG | 1 cut(s) | 1972 |
| BsaAI | YACGTR | 2 cut(s) | 3914, 4019 |
| BsaBI | GATNNNNATC | 2 cut(s) | 375, 2847 |
| BsaI | GGTCTC | 2 cut(s) | 1949, 3840 |
| BsaJI | CCNNGG | 4 cut(s) | 547, 1565, 1971, 3113 |
| BsaWI | WCCGGW | 1 cut(s) | 1666 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 904, 934, 2183, 2213 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 1275, 2499, 2724, 3119, 3281, 4199 |
| Bse1I | ACTGG | 3 cut(s) | 359, 3286, 3783 |
| Bse3DI | GCAATG | 2 cut(s) | 3683, 4303 |
| Bse8I | GATNNNNATC | 2 cut(s) | 375, 2847 |
| BseAI | TCCGGA | 1 cut(s) | 1666 |
| BseBI | CCWGG | 5 cut(s) | 292, 1566, 3572, 3600, 4088 |
| BseDI | CCNNGG | 4 cut(s) | 547, 1565, 1971, 3113 |
| BseGI | GGATG | 9 cut(s) | 190, 310, 543, 705, 886, 1509, 2033, 3951, 4055 |
| BseJI | GATNNNNATC | 2 cut(s) | 375, 2847 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 1275, 2499, 2724, 3119, 3281, 4199 |
| BseMI | GCAATG | 2 cut(s) | 3683, 4303 |
| BseMII | CTCAG | 7 cut(s) | 1709, 1767, 1945, 2062, 3656, 3774, 4196 |
| BseNI | ACTGG | 3 cut(s) | 359, 3286, 3783 |
| BseSI | GKGCMC | 6 cut(s) | 2155, 2507, 3356, 3418, 3923, 4104 |
| BseXI | GCAGC | 6 cut(s) | 466, 1881, 2348, 3069, 3072, 3814 |
| Bsh1236I | CGCG | 1 cut(s) | 1404 |
| BshFI | GGCC | 5 cut(s) | 497, 624, 1082, 1200, 2866 |
| BshNI | GGYRCC | 2 cut(s) | 584, 3413 |
| BsiHKAI | GWGCWC | 7 cut(s) | 2155, 2507, 2790, 2992, 3356, 4104, 4212 |
| BsiHKCI | CYCGRG | 1 cut(s) | 4233 |
| BsiSI | CCGG | 2 cut(s) | 1667, 1971 |
| BsiWI | CGTACG | 1 cut(s) | 3914 |
| BslFI | GGGAC | 5 cut(s) | 1156, 1961, 2233, 3257, 3293 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 1275, 2499, 2724, 3119, 3281, 4199 |
| BsmAI | GTCTC | 4 cut(s) | 907, 1949, 2299, 3840 |
| BsmFI | GGGAC | 5 cut(s) | 1156, 1961, 2233, 3257, 3293 |
| BsmI | GAATGC | 3 cut(s) | 3581, 3905, 3945 |
| BsnI | GGCC | 5 cut(s) | 497, 624, 1082, 1200, 2866 |
| Bso31I | GGTCTC | 2 cut(s) | 1949, 3840 |
| BsoBI | CYCGRG | 1 cut(s) | 4233 |
| Bsp119I | TTCGAA | 1 cut(s) | 1736 |
| Bsp13I | TCCGGA | 1 cut(s) | 1666 |
| Bsp1407I | TGTACA | 1 cut(s) | 4079 |
| BspACI | CCGC | 7 cut(s) | 121, 751, 910, 1239, 3311, 3773, 3841 |
| BspANI | GGCC | 5 cut(s) | 497, 624, 1082, 1200, 2866 |
| BspCNI | CTCAG | 7 cut(s) | 1710, 1768, 1944, 2061, 3655, 3773, 4195 |
| BspEI | TCCGGA | 1 cut(s) | 1666 |
| BspFNI | CGCG | 1 cut(s) | 1404 |
| BspHI | TCATGA | 2 cut(s) | 430, 2971 |
| BspLI | GGNNCC | 6 cut(s) | 586, 1228, 1976, 1977, 2960, 3415 |
| BspOI | GCTAGC | 1 cut(s) | 3027 |
| BspPI | GGATC | 4 cut(s) | 371, 1025, 2286, 3590 |
| BspQI | GCTCTTC | 3 cut(s) | 2087, 2980, 3070 |
| BspT104I | TTCGAA | 1 cut(s) | 1736 |
| BspT107I | GGYRCC | 2 cut(s) | 584, 3413 |
| BspTI | CTTAAG | 2 cut(s) | 97, 2608 |
| BspTNI | GGTCTC | 2 cut(s) | 1949, 3840 |
| BsrBI | CCGCTC | 1 cut(s) | 1239 |
| BsrDI | GCAATG | 2 cut(s) | 3683, 4303 |
| BsrGI | TGTACA | 1 cut(s) | 4079 |
| BsrI | ACTGG | 3 cut(s) | 359, 3286, 3783 |
| BssECI | CCNNGG | 4 cut(s) | 547, 1565, 1971, 3113 |
| BssNAI | GTATAC | 1 cut(s) | 3860 |
| BssSI | CACGAG | 1 cut(s) | 3191 |
| BssT1I | CCWWGG | 1 cut(s) | 547 |
| Bst1107I | GTATAC | 1 cut(s) | 3860 |
| Bst2BI | CACGAG | 1 cut(s) | 3191 |
| Bst2UI | CCWGG | 5 cut(s) | 292, 1566, 3572, 3600, 4088 |
| Bst6I | CTCTTC | 7 cut(s) | 34, 660, 2087, 2980, 3070, 3234, 3978 |
| BstAFI | CTTAAG | 2 cut(s) | 97, 2608 |
| BstAPI | GCANNNNNTGC | 4 cut(s) | 1513, 2779, 3824, 4305 |
| BstAUI | TGTACA | 1 cut(s) | 4079 |
| BstBAI | YACGTR | 2 cut(s) | 3914, 4019 |
| BstBI | TTCGAA | 1 cut(s) | 1736 |
| BstDSI | CCRYGG | 1 cut(s) | 3113 |
| BstEII | GGTNACC | 1 cut(s) | 4112 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1273 |
| BstF5I | GGATG | 9 cut(s) | 190, 310, 543, 705, 886, 1509, 2033, 3951, 4055 |
| BstFNI | CGCG | 1 cut(s) | 1404 |
| BstH2I | RGCGCY | 1 cut(s) | 2905 |
| BstHHI | GCGC | 2 cut(s) | 1575, 2904 |
| BstMAI | GTCTC | 4 cut(s) | 907, 1949, 2299, 3840 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 1245, 1513, 1570, 2734, 2779, 3576, 3824, 4305 |
| BstNI | CCWGG | 5 cut(s) | 292, 1566, 3572, 3600, 4088 |
| BstNSI | RCATGY | 4 cut(s) | 1377, 1864, 2710, 3372 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2610 |
| BstPI | GGTNACC | 1 cut(s) | 4112 |
| BstSCI | CCNGG | 6 cut(s) | 290, 1564, 1970, 3570, 3598, 4086 |
| BstSLI | GKGCMC | 6 cut(s) | 2155, 2507, 3356, 3418, 3923, 4104 |
| BstUI | CGCG | 1 cut(s) | 1404 |
| BstV1I | GCAGC | 6 cut(s) | 466, 1881, 2348, 3069, 3072, 3814 |
| BstX2I | RGATCY | 3 cut(s) | 376, 1989, 2278 |
| BstYI | RGATCY | 3 cut(s) | 376, 1989, 2278 |
| BstZ17I | GTATAC | 1 cut(s) | 3860 |
| BsuI | GTATCC | 2 cut(s) | 109, 3116 |
| BsuRI | GGCC | 5 cut(s) | 497, 624, 1082, 1200, 2866 |
| BtgI | CCRYGG | 1 cut(s) | 3113 |
| BtsCI | GGATG | 9 cut(s) | 190, 310, 543, 705, 886, 1509, 2033, 3951, 4055 |
| BtsI | GCAGTG | 2 cut(s) | 2614, 2777 |
| BtsIMutI | CAGTG | 7 cut(s) | 357, 1939, 2614, 2777, 3279, 3633, 4290 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2779 |
| CciI | TCATGA | 2 cut(s) | 430, 2971 |
| CfoI | GCGC | 2 cut(s) | 1575, 2904 |
| Cfr13I | GGNCC | 5 cut(s) | 748, 1226, 1975, 2653, 3224 |
| DraI | TTTAAA | 1 cut(s) | 1908 |
| DraIII | CACNNNGTG | 1 cut(s) | 3722 |
| EaeI | YGGCCR | 1 cut(s) | 495 |
| Eam1104I | CTCTTC | 7 cut(s) | 34, 660, 2087, 2980, 3070, 3234, 3978 |
| EarI | CTCTTC | 7 cut(s) | 34, 660, 2087, 2980, 3070, 3234, 3978 |
| Ecl136II | GAGCTC | 2 cut(s) | 2788, 4210 |
| Eco130I | CCWWGG | 1 cut(s) | 547 |
| Eco147I | AGGCCT | 1 cut(s) | 1200 |
| Eco24I | GRGCYC | 3 cut(s) | 1761, 2790, 4212 |
| Eco31I | GGTCTC | 2 cut(s) | 1949, 3840 |
| Eco32I | GATATC | 2 cut(s) | 1805, 2969 |
| Eco47I | GGWCC | 5 cut(s) | 748, 1226, 1975, 2653, 3224 |
| Eco47III | AGCGCT | 1 cut(s) | 2903 |
| Eco53kI | GAGCTC | 2 cut(s) | 2788, 4210 |
| Eco57I | CTGAAG | 6 cut(s) | 163, 510, 1502, 2111, 2492, 3656 |
| Eco72I | CACGTG | 1 cut(s) | 4019 |
| Eco88I | CYCGRG | 1 cut(s) | 4233 |
| Eco91I | GGTNACC | 1 cut(s) | 4112 |
| EcoICRI | GAGCTC | 2 cut(s) | 2788, 4210 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1273 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1975 |
| EcoO65I | GGTNACC | 1 cut(s) | 4112 |
| EcoRI | GAATTC | 1 cut(s) | 539 |
| EcoRII | CCWGG | 5 cut(s) | 290, 1564, 3570, 3598, 4086 |
| EcoRV | GATATC | 2 cut(s) | 1805, 2969 |
| EcoT14I | CCWWGG | 1 cut(s) | 547 |
| EcoT22I | ATGCAT | 2 cut(s) | 1509, 4055 |
| EcoT38I | GRGCYC | 3 cut(s) | 1761, 2790, 4212 |
| ErhI | CCWWGG | 1 cut(s) | 547 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 437, 469, 1275, 1307, 2871, 2903 |
| FaqI | GGGAC | 5 cut(s) | 1156, 1961, 2233, 3257, 3293 |
| FauI | CCCGC | 3 cut(s) | 128, 3318, 3780 |
| FauNDI | CATATG | 1 cut(s) | 85 |
| FbaI | TGATCA | 2 cut(s) | 427, 2848 |
| FblI | GTMKAC | 3 cut(s) | 3421, 3589, 3859 |
| Fnu4HI | GCNGC | 6 cut(s) | 480, 1870, 2362, 3058, 3061, 3828 |
| FokI | GGATG | 9 cut(s) | 197, 317, 530, 712, 893, 1516, 2020, 3938, 4062 |
| FriOI | GRGCYC | 3 cut(s) | 1761, 2790, 4212 |
| Fsp4HI | GCNGC | 6 cut(s) | 480, 1870, 2362, 3058, 3061, 3828 |
| FspBI | CTAG | 8 cut(s) | 818, 1839, 2258, 2603, 3024, 3168, 3375, 4316 |
| GlaI | GCGC | 2 cut(s) | 1574, 2903 |
| GluI | GCNGC | 6 cut(s) | 480, 1870, 2362, 3058, 3061, 3828 |
| GsuI | CTGGAG | 2 cut(s) | 256, 3621 |
| HaeII | RGCGCY | 1 cut(s) | 2905 |
| HaeIII | GGCC | 5 cut(s) | 497, 624, 1082, 1200, 2866 |
| HapII | CCGG | 2 cut(s) | 1667, 1971 |
| HhaI | GCGC | 2 cut(s) | 1575, 2904 |
| Hin6I | GCGC | 2 cut(s) | 1573, 2902 |
| HinP1I | GCGC | 2 cut(s) | 1573, 2902 |
| HincII | GTYRAC | 1 cut(s) | 3528 |
| HindII | GTYRAC | 1 cut(s) | 3528 |
| HindIII | AAGCTT | 6 cut(s) | 765, 1814, 1844, 1945, 2204, 2735 |
| HpaII | CCGG | 2 cut(s) | 1667, 1971 |
| HphI | GGTGA | 5 cut(s) | 122, 166, 2021, 2195, 3412 |
| HpyCH4IV | ACGT | 6 cut(s) | 147, 3242, 3270, 3721, 3913, 4018 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 1245, 1513, 1570, 2734, 2779, 3576, 3824, 4305 |
| HpySE526I | ACGT | 6 cut(s) | 147, 3242, 3270, 3721, 3913, 4018 |
| HspAI | GCGC | 2 cut(s) | 1573, 2902 |
| KflI | GGGWCCC | 1 cut(s) | 1975 |
| Kpn2I | TCCGGA | 1 cut(s) | 1666 |
| KpnI | GGTACC | 1 cut(s) | 588 |
| Ksp22I | TGATCA | 2 cut(s) | 427, 2848 |
| LguI | GCTCTTC | 3 cut(s) | 2087, 2980, 3070 |
| LmnI | GCTCC | 3 cut(s) | 2633, 2793, 2964 |
| Lsp1109I | GCAGC | 6 cut(s) | 466, 1881, 2348, 3069, 3072, 3814 |
| LweI | GCATC | 5 cut(s) | 1494, 1624, 2439, 3322, 4040 |
| MaeI | CTAG | 8 cut(s) | 818, 1839, 2258, 2603, 3024, 3168, 3375, 4316 |
| MaeII | ACGT | 6 cut(s) | 147, 3242, 3270, 3721, 3913, 4018 |
| MaeIII | GTNAC | 8 cut(s) | 809, 1405, 1779, 1934, 2041, 2562, 2612, 4112 |
| MbiI | CCGCTC | 1 cut(s) | 1239 |
| MfeI | CAATTG | 4 cut(s) | 968, 1043, 1212, 1682 |
| MflI | RGATCY | 3 cut(s) | 376, 1989, 2278 |
| MlsI | TGGCCA | 1 cut(s) | 497 |
| MluNI | TGGCCA | 1 cut(s) | 497 |
| MlyI | GAGTC | 4 cut(s) | 542, 1931, 2095, 3585 |
| MmeI | TCCRAC | 6 cut(s) | 516, 1103, 1204, 2256, 3103, 3708 |
| Mox20I | TGGCCA | 1 cut(s) | 497 |
| Mph1103I | ATGCAT | 2 cut(s) | 1509, 4055 |
| MroI | TCCGGA | 1 cut(s) | 1666 |
| MroXI | GAANNNNTTC | 4 cut(s) | 1130, 1539, 2842, 3669 |
| MscI | TGGCCA | 1 cut(s) | 497 |
| MslI | CAYNNNNRTG | 6 cut(s) | 1593, 3216, 4058, 4097, 4107, 4134 |
| Msp20I | TGGCCA | 1 cut(s) | 497 |
| MspA1I | CMGCKG | 2 cut(s) | 910, 3392 |
| MspCI | CTTAAG | 2 cut(s) | 97, 2608 |
| MspI | CCGG | 2 cut(s) | 1667, 1971 |
| MspR9I | CCNGG | 6 cut(s) | 292, 1566, 1972, 3572, 3600, 4088 |
| MunI | CAATTG | 4 cut(s) | 968, 1043, 1212, 1682 |
| Mva1269I | GAATGC | 3 cut(s) | 3581, 3905, 3945 |
| MvaI | CCWGG | 5 cut(s) | 292, 1566, 3572, 3600, 4088 |
| MvnI | CGCG | 1 cut(s) | 1404 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 1245, 1513, 1570, 2734, 2779, 3576, 3824, 4305 |
| NciI | CCSGG | 1 cut(s) | 1972 |
| NdeI | CATATG | 1 cut(s) | 85 |
| NheI | GCTAGC | 1 cut(s) | 3023 |
| NlaIV | GGNNCC | 6 cut(s) | 586, 1228, 1976, 1977, 2960, 3415 |
| NmuCI | GTSAC | 4 cut(s) | 809, 1405, 1934, 2612 |
| NsiI | ATGCAT | 2 cut(s) | 1509, 4055 |
| NspI | RCATGY | 4 cut(s) | 1377, 1864, 2710, 3372 |
| NspV | TTCGAA | 1 cut(s) | 1736 |
| OliI | CACNNNNGTG | 1 cut(s) | 4107 |
| PaeI | GCATGC | 2 cut(s) | 2710, 3372 |
| PagI | TCATGA | 2 cut(s) | 430, 2971 |
| PceI | AGGCCT | 1 cut(s) | 1200 |
| PciI | ACATGT | 1 cut(s) | 1860 |
| PciSI | GCTCTTC | 3 cut(s) | 2087, 2980, 3070 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 3267 |
| PctI | GAATGC | 3 cut(s) | 3581, 3905, 3945 |
| PdmI | GAANNNNTTC | 4 cut(s) | 1130, 1539, 2842, 3669 |
| PfeI | GAWTC | 9 cut(s) | 245, 394, 1744, 1896, 2120, 2476, 2843, 3548, 3638 |
| Pfl23II | CGTACG | 1 cut(s) | 3914 |
| PflFI | GACNNNGTC | 1 cut(s) | 918 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 3281, 4199 |
| PfoI | TCCNGGA | 1 cut(s) | 3598 |
| PkrI | GCNGC | 6 cut(s) | 481, 1871, 2363, 3059, 3062, 3829 |
| PleI | GAGTC | 4 cut(s) | 541, 1931, 2094, 3585 |
| PmaCI | CACGTG | 1 cut(s) | 4019 |
| PmlI | CACGTG | 1 cut(s) | 4019 |
| PpsI | GAGTC | 4 cut(s) | 541, 1931, 2094, 3585 |
| Ppu21I | YACGTR | 2 cut(s) | 3914, 4019 |
| PpuMI | RGGWCCY | 1 cut(s) | 1975 |
| PscI | ACATGT | 1 cut(s) | 1860 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2610 |
| PshBI | ATTAAT | 1 cut(s) | 2250 |
| PsiI | TTATAA | 1 cut(s) | 1025 |
| Psp124BI | GAGCTC | 2 cut(s) | 2790, 4212 |
| Psp1406I | AACGTT | 1 cut(s) | 3242 |
| Psp5II | RGGWCCY | 1 cut(s) | 1975 |
| Psp6I | CCWGG | 5 cut(s) | 290, 1564, 3570, 3598, 4086 |
| PspCI | CACGTG | 1 cut(s) | 4019 |
| PspEI | GGTNACC | 1 cut(s) | 4112 |
| PspGI | CCWGG | 5 cut(s) | 290, 1564, 3570, 3598, 4086 |
| PspLI | CGTACG | 1 cut(s) | 3914 |
| PspN4I | GGNNCC | 6 cut(s) | 586, 1228, 1976, 1977, 2960, 3415 |
| PspPI | GGNCC | 5 cut(s) | 748, 1226, 1975, 2653, 3224 |
| PspPPI | RGGWCCY | 1 cut(s) | 1975 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2779 |
| PsuI | RGATCY | 3 cut(s) | 376, 1989, 2278 |
| PsyI | GACNNNGTC | 1 cut(s) | 918 |
| PvuII | CAGCTG | 1 cut(s) | 3392 |
| RseI | CAYNNNNRTG | 6 cut(s) | 1593, 3216, 4058, 4097, 4107, 4134 |
| SacI | GAGCTC | 2 cut(s) | 2790, 4212 |
| SapI | GCTCTTC | 3 cut(s) | 2087, 2980, 3070 |
| SatI | GCNGC | 6 cut(s) | 480, 1870, 2362, 3058, 3061, 3828 |
| Sau96I | GGNCC | 5 cut(s) | 748, 1226, 1975, 2653, 3224 |
| ScaI | AGTACT | 1 cut(s) | 4231 |
| SchI | GAGTC | 4 cut(s) | 542, 1931, 2095, 3585 |
| ScrFI | CCNGG | 6 cut(s) | 292, 1566, 1972, 3572, 3600, 4088 |
| SfaNI | GCATC | 5 cut(s) | 1494, 1624, 2439, 3322, 4040 |
| SfuI | TTCGAA | 1 cut(s) | 1736 |
| SinI | GGWCC | 5 cut(s) | 748, 1226, 1975, 2653, 3224 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 1593, 3216, 4058, 4097, 4107, 4134 |
| SmlI | CTYRAG | 7 cut(s) | 97, 197, 1109, 1270, 1985, 2159, 2608 |
| SmoI | CTYRAG | 7 cut(s) | 97, 197, 1109, 1270, 1985, 2159, 2608 |
| SpeI | ACTAGT | 1 cut(s) | 3167 |
| SphI | GCATGC | 2 cut(s) | 2710, 3372 |
| SseBI | AGGCCT | 1 cut(s) | 1200 |
| SsiI | CCGC | 7 cut(s) | 121, 751, 910, 1239, 3311, 3773, 3841 |
| SspI | AATATT | 3 cut(s) | 1359, 2380, 3049 |
| SspMI | CTAG | 8 cut(s) | 818, 1839, 2258, 2603, 3024, 3168, 3375, 4316 |
| SstI | GAGCTC | 2 cut(s) | 2790, 4212 |
| StuI | AGGCCT | 1 cut(s) | 1200 |
| StyD4I | CCNGG | 6 cut(s) | 290, 1564, 1970, 3570, 3598, 4086 |
| StyI | CCWWGG | 1 cut(s) | 547 |
| TaiI | ACGT | 6 cut(s) | 150, 3245, 3273, 3724, 3916, 4021 |
| TaqI | TCGA | 5 cut(s) | 1006, 1434, 1703, 1736, 3594 |
| TatI | WGTACW | 4 cut(s) | 1312, 1600, 4079, 4229 |
| TfiI | GAWTC | 9 cut(s) | 245, 394, 1744, 1896, 2120, 2476, 2843, 3548, 3638 |
| TscAI | CASTG | 7 cut(s) | 357, 1939, 2621, 2784, 3286, 3640, 4290 |
| TseFI | GTSAC | 4 cut(s) | 809, 1405, 1934, 2612 |
| TseI | GCWGC | 6 cut(s) | 479, 1869, 2361, 3057, 3060, 3827 |
| Tsp45I | GTSAC | 4 cut(s) | 809, 1405, 1934, 2612 |
| TspGWI | ACGGA | 3 cut(s) | 406, 617, 3541 |
| TspRI | CASTG | 7 cut(s) | 357, 1939, 2621, 2784, 3286, 3640, 4290 |
| Tth111I | GACNNNGTC | 1 cut(s) | 918 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 3281, 4199 |
| Vha464I | CTTAAG | 2 cut(s) | 97, 2608 |
| VneI | GTGCAC | 4 cut(s) | 2151, 2503, 3352, 4100 |
| VpaK11BI | GGWCC | 5 cut(s) | 748, 1226, 1975, 2653, 3224 |
| VspI | ATTAAT | 1 cut(s) | 2250 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1273 |
| XapI | RAATTY | 7 cut(s) | 168, 539, 1731, 1828, 1963, 2804, 3884 |
| XbaI | TCTAGA | 1 cut(s) | 2602 |
| XceI | RCATGY | 4 cut(s) | 1377, 1864, 2710, 3372 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 298 |
| XmiI | GTMKAC | 3 cut(s) | 3421, 3589, 3859 |
| XmnI | GAANNNNTTC | 4 cut(s) | 1130, 1539, 2842, 3669 |
| XspI | CTAG | 8 cut(s) | 818, 1839, 2258, 2603, 3024, 3168, 3375, 4316 |
| ZrmI | AGTACT | 1 cut(s) | 4231 |
| Zsp2I | ATGCAT | 2 cut(s) | 1509, 4055 |