TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| C-JID | PF20160 | 32 - 173 | 1.3e-21 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 656 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 305 |
| AciI | CCGC | 2 cut(s) | 233, 675 |
| AcsI | RAATTY | 1 cut(s) | 105 |
| AfaI | GTAC | 1 cut(s) | 119 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 238, 305, 435, 436 |
| AgsI | TTSAA | 5 cut(s) | 215, 257, 541, 581, 644 |
| AjnI | CCWGG | 2 cut(s) | 94, 163 |
| AleI | CACNNNNGTG | 1 cut(s) | 129 |
| AluBI | AGCT | 3 cut(s) | 157, 409, 523 |
| AluI | AGCT | 3 cut(s) | 157, 409, 523 |
| AoxI | GGCC | 1 cut(s) | 266 |
| ApaI | GGGCCC | 1 cut(s) | 270 |
| ApeKI | GCWGC | 1 cut(s) | 157 |
| ApoI | RAATTY | 1 cut(s) | 105 |
| AseI | ATTAAT | 1 cut(s) | 561 |
| AspLEI | GCGC | 2 cut(s) | 253, 665 |
| AspS9I | GGNCC | 6 cut(s) | 92, 266, 267, 296, 490, 668 |
| AsuHPI | GGTGA | 1 cut(s) | 116 |
| AvaII | GGWCC | 4 cut(s) | 92, 296, 490, 668 |
| BaeGI | GKGCMC | 1 cut(s) | 270 |
| BanII | GRGCYC | 1 cut(s) | 270 |
| BbsI | GAAGAC | 1 cut(s) | 132 |
| BbvI | GCAGC | 1 cut(s) | 144 |
| BciT130I | CCWGG | 2 cut(s) | 96, 165 |
| BfaI | CTAG | 1 cut(s) | 606 |
| BfmI | CTRYAG | 2 cut(s) | 150, 433 |
| BfoI | RGCGCY | 1 cut(s) | 254 |
| BfuAI | ACCTGC | 1 cut(s) | 656 |
| BisI | GCNGC | 1 cut(s) | 158 |
| BlsI | GCNGC | 1 cut(s) | 159 |
| Bme1390I | CCNGG | 2 cut(s) | 96, 165 |
| Bme18I | GGWCC | 4 cut(s) | 92, 296, 490, 668 |
| BmgT120I | GGNCC | 6 cut(s) | 92, 266, 267, 296, 490, 668 |
| BmiI | GGNNCC | 5 cut(s) | 267, 268, 491, 670, 679 |
| BmrFI | CCNGG | 2 cut(s) | 96, 165 |
| BmrI | ACTGGG | 1 cut(s) | 272 |
| BmsI | GCATC | 3 cut(s) | 169, 563, 611 |
| BmuI | ACTGGG | 1 cut(s) | 272 |
| BpiI | GAAGAC | 1 cut(s) | 132 |
| BsaJI | CCNNGG | 1 cut(s) | 299 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 238, 305, 435, 436 |
| Bse1I | ACTGG | 1 cut(s) | 267 |
| BseBI | CCWGG | 2 cut(s) | 96, 165 |
| BseDI | CCNNGG | 1 cut(s) | 299 |
| BseGI | GGATG | 2 cut(s) | 160, 628 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 238, 305, 435, 436 |
| BseNI | ACTGG | 1 cut(s) | 267 |
| BseRI | GAGGAG | 1 cut(s) | 533 |
| BseSI | GKGCMC | 1 cut(s) | 270 |
| BseXI | GCAGC | 1 cut(s) | 144 |
| BseYI | CCCAGC | 1 cut(s) | 671 |
| BshFI | GGCC | 1 cut(s) | 268 |
| BslFI | GGGAC | 2 cut(s) | 343, 654 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 238, 305, 435, 436 |
| BsmFI | GGGAC | 2 cut(s) | 343, 654 |
| BsnI | GGCC | 1 cut(s) | 268 |
| Bsp120I | GGGCCC | 1 cut(s) | 266 |
| Bsp1286I | GDGCHC | 1 cut(s) | 270 |
| Bsp143I | GATC | 1 cut(s) | 334 |
| Bsp19I | CCATGG | 1 cut(s) | 299 |
| BspACI | CCGC | 2 cut(s) | 233, 675 |
| BspANI | GGCC | 1 cut(s) | 268 |
| BspHI | TCATGA | 2 cut(s) | 382, 691 |
| BspLI | GGNNCC | 5 cut(s) | 267, 268, 491, 670, 679 |
| BspMI | ACCTGC | 1 cut(s) | 656 |
| BsrI | ACTGG | 1 cut(s) | 267 |
| BssECI | CCNNGG | 1 cut(s) | 299 |
| BssMI | GATC | 1 cut(s) | 334 |
| BssT1I | CCWWGG | 1 cut(s) | 299 |
| Bst2UI | CCWGG | 2 cut(s) | 96, 165 |
| Bst4CI | ACNGT | 2 cut(s) | 151, 585 |
| BstDSI | CCRYGG | 1 cut(s) | 299 |
| BstF5I | GGATG | 2 cut(s) | 160, 628 |
| BstH2I | RGCGCY | 1 cut(s) | 254 |
| BstHHI | GCGC | 2 cut(s) | 253, 665 |
| BstKTI | GATC | 1 cut(s) | 337 |
| BstMBI | GATC | 1 cut(s) | 334 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 555, 623 |
| BstNI | CCWGG | 2 cut(s) | 96, 165 |
| BstSCI | CCNGG | 2 cut(s) | 94, 163 |
| BstSFI | CTRYAG | 2 cut(s) | 150, 433 |
| BstSLI | GKGCMC | 1 cut(s) | 270 |
| BstV1I | GCAGC | 1 cut(s) | 144 |
| BstV2I | GAAGAC | 1 cut(s) | 132 |
| BsuRI | GGCC | 1 cut(s) | 268 |
| BtgI | CCRYGG | 1 cut(s) | 299 |
| BtgZI | GCGATG | 1 cut(s) | 586 |
| BtsCI | GGATG | 2 cut(s) | 160, 628 |
| BveI | ACCTGC | 1 cut(s) | 656 |
| CciI | TCATGA | 2 cut(s) | 382, 691 |
| CfoI | GCGC | 2 cut(s) | 253, 665 |
| Cfr13I | GGNCC | 6 cut(s) | 92, 266, 267, 296, 490, 668 |
| Csp6I | GTAC | 1 cut(s) | 118 |
| CviAII | CATG | 5 cut(s) | 300, 362, 383, 392, 692 |
| CviJI | RGCY | 5 cut(s) | 157, 268, 409, 523, 626 |
| CviKI_1 | RGCY | 5 cut(s) | 157, 268, 409, 523, 626 |
| CviQI | GTAC | 1 cut(s) | 118 |
| DpnI | GATC | 1 cut(s) | 336 |
| DpnII | GATC | 1 cut(s) | 334 |
| Eco130I | CCWWGG | 1 cut(s) | 299 |
| Eco24I | GRGCYC | 1 cut(s) | 270 |
| Eco32I | GATATC | 1 cut(s) | 397 |
| Eco47I | GGWCC | 4 cut(s) | 92, 296, 490, 668 |
| EcoO109I | RGGNCCY | 2 cut(s) | 266, 668 |
| EcoRII | CCWGG | 2 cut(s) | 94, 163 |
| EcoRV | GATATC | 1 cut(s) | 397 |
| EcoT14I | CCWWGG | 1 cut(s) | 299 |
| EcoT38I | GRGCYC | 1 cut(s) | 270 |
| ErhI | CCWWGG | 1 cut(s) | 299 |
| FaeI | CATG | 5 cut(s) | 303, 365, 386, 395, 695 |
| FaqI | GGGAC | 2 cut(s) | 343, 654 |
| FatI | CATG | 5 cut(s) | 299, 361, 382, 391, 691 |
| FauI | CCCGC | 1 cut(s) | 240 |
| Fnu4HI | GCNGC | 1 cut(s) | 158 |
| FokI | GGATG | 2 cut(s) | 147, 615 |
| FriOI | GRGCYC | 1 cut(s) | 270 |
| Fsp4HI | GCNGC | 1 cut(s) | 158 |
| FspBI | CTAG | 1 cut(s) | 606 |
| GlaI | GCGC | 2 cut(s) | 252, 664 |
| GluI | GCNGC | 1 cut(s) | 158 |
| GsaI | CCCAGC | 1 cut(s) | 675 |
| HaeII | RGCGCY | 1 cut(s) | 254 |
| HaeIII | GGCC | 1 cut(s) | 268 |
| HhaI | GCGC | 2 cut(s) | 253, 665 |
| Hin1II | CATG | 5 cut(s) | 303, 365, 386, 395, 695 |
| Hin6I | GCGC | 2 cut(s) | 251, 663 |
| HinP1I | GCGC | 2 cut(s) | 251, 663 |
| HincII | GTYRAC | 2 cut(s) | 36, 323 |
| HindII | GTYRAC | 2 cut(s) | 36, 323 |
| HinfI | GANTC | 1 cut(s) | 192 |
| HpaI | GTTAAC | 1 cut(s) | 36 |
| HphI | GGTGA | 1 cut(s) | 116 |
| Hpy166II | GTNNAC | 3 cut(s) | 36, 56, 323 |
| Hpy188I | TCNGA | 1 cut(s) | 334 |
| Hpy188III | TCNNGA | 2 cut(s) | 383, 692 |
| Hpy8I | GTNNAC | 3 cut(s) | 36, 56, 323 |
| HpyAV | CCTTC | 1 cut(s) | 587 |
| HpyCH4III | ACNGT | 2 cut(s) | 151, 585 |
| HpyCH4V | TGCA | 3 cut(s) | 160, 472, 617 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 555, 623 |
| Hsp92II | CATG | 5 cut(s) | 303, 365, 386, 395, 695 |
| HspAI | GCGC | 2 cut(s) | 251, 663 |
| KspAI | GTTAAC | 1 cut(s) | 36 |
| Kzo9I | GATC | 1 cut(s) | 334 |
| LmnI | GCTCC | 2 cut(s) | 520, 599 |
| Lsp1109I | GCAGC | 1 cut(s) | 144 |
| LweI | GCATC | 3 cut(s) | 169, 563, 611 |
| MaeI | CTAG | 1 cut(s) | 606 |
| MaeIII | GTNAC | 2 cut(s) | 71, 176 |
| MalI | GATC | 1 cut(s) | 336 |
| MboI | GATC | 1 cut(s) | 334 |
| MboII | GAAGA | 4 cut(s) | 132, 340, 490, 521 |
| MhlI | GDGCHC | 1 cut(s) | 270 |
| MluCI | AATT | 3 cut(s) | 105, 465, 639 |
| MnlI | CCTC | 4 cut(s) | 336, 454, 499, 511 |
| MseI | TTAA | 4 cut(s) | 35, 48, 561, 709 |
| MslI | CAYNNNNRTG | 1 cut(s) | 129 |
| MspA1I | CMGCKG | 1 cut(s) | 675 |
| MspR9I | CCNGG | 2 cut(s) | 96, 165 |
| MvaI | CCWGG | 2 cut(s) | 96, 165 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 555, 623 |
| NcoI | CCATGG | 1 cut(s) | 299 |
| NdeII | GATC | 1 cut(s) | 334 |
| NlaIII | CATG | 5 cut(s) | 303, 365, 386, 395, 695 |
| NlaIV | GGNNCC | 5 cut(s) | 267, 268, 491, 670, 679 |
| NmuCI | GTSAC | 1 cut(s) | 71 |
| OliI | CACNNNNGTG | 1 cut(s) | 129 |
| PagI | TCATGA | 2 cut(s) | 382, 691 |
| PfeI | GAWTC | 1 cut(s) | 192 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 305 |
| PfoI | TCCNGGA | 1 cut(s) | 94 |
| PkrI | GCNGC | 1 cut(s) | 159 |
| PpuMI | RGGWCCY | 1 cut(s) | 668 |
| PshBI | ATTAAT | 1 cut(s) | 561 |
| Psp5II | RGGWCCY | 1 cut(s) | 668 |
| Psp6I | CCWGG | 2 cut(s) | 94, 163 |
| PspFI | CCCAGC | 1 cut(s) | 671 |
| PspGI | CCWGG | 2 cut(s) | 94, 163 |
| PspN4I | GGNNCC | 5 cut(s) | 267, 268, 491, 670, 679 |
| PspOMI | GGGCCC | 1 cut(s) | 266 |
| PspPI | GGNCC | 6 cut(s) | 92, 266, 267, 296, 490, 668 |
| PspPPI | RGGWCCY | 1 cut(s) | 668 |
| RsaI | GTAC | 1 cut(s) | 119 |
| RsaNI | GTAC | 1 cut(s) | 118 |
| RseI | CAYNNNNRTG | 1 cut(s) | 129 |
| SaqAI | TTAA | 4 cut(s) | 35, 48, 561, 709 |
| SatI | GCNGC | 1 cut(s) | 158 |
| Sau3AI | GATC | 1 cut(s) | 334 |
| Sau96I | GGNCC | 6 cut(s) | 92, 266, 267, 296, 490, 668 |
| ScrFI | CCNGG | 2 cut(s) | 96, 165 |
| SduI | GDGCHC | 1 cut(s) | 270 |
| SetI | ASST | 8 cut(s) | 159, 169, 290, 328, 411, 525, 657, 670 |
| SfaNI | GCATC | 3 cut(s) | 169, 563, 611 |
| SfcI | CTRYAG | 2 cut(s) | 150, 433 |
| SinI | GGWCC | 4 cut(s) | 92, 296, 490, 668 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 129 |
| Sse9I | AATT | 3 cut(s) | 105, 465, 639 |
| SsiI | CCGC | 2 cut(s) | 233, 675 |
| SspMI | CTAG | 1 cut(s) | 606 |
| StyD4I | CCNGG | 2 cut(s) | 94, 163 |
| StyI | CCWWGG | 1 cut(s) | 299 |
| TaaI | ACNGT | 2 cut(s) | 151, 585 |
| TaqI | TCGA | 2 cut(s) | 143, 424 |
| TasI | AATT | 3 cut(s) | 105, 465, 639 |
| TfiI | GAWTC | 1 cut(s) | 192 |
| Tru1I | TTAA | 4 cut(s) | 35, 48, 561, 709 |
| Tru9I | TTAA | 4 cut(s) | 35, 48, 561, 709 |
| TseFI | GTSAC | 1 cut(s) | 71 |
| TseI | GCWGC | 1 cut(s) | 157 |
| Tsp45I | GTSAC | 1 cut(s) | 71 |
| TspDTI | ATGAA | 5 cut(s) | 17, 18, 117, 470, 680 |
| TspGWI | ACGGA | 1 cut(s) | 482 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 305 |
| VpaK11BI | GGWCC | 4 cut(s) | 92, 296, 490, 668 |
| VspI | ATTAAT | 1 cut(s) | 561 |
| XapI | RAATTY | 1 cut(s) | 105 |
| XspI | CTAG | 1 cut(s) | 606 |