TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 25 - 206 | 2.6e-50 | TIR domain |
| TIR_2 | PF13676 | 27 - 124 | 9.8e-17 | TIR domain |
| NB-ARC | PF00931 | 213 - 381 | 1.8e-20 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 447 - 521 | 1.2e-12 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 699 - 813 | 5.1e-09 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 710 - 774 | 7.3e-06 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 752 - 831 | 2.8e-07 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 799 - 885 | 4.4e-08 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 967 - 1033 | 1.3e-06 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 983 - 1061 | 2.5e-08 | Disease resistance protein RPS4B-like, leucine-rich repeats |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 4 cut(s) | 2186, 2327, 2468, 2609 |
| AccBSI | CCGCTC | 1 cut(s) | 1270 |
| AccI | GTMKAC | 3 cut(s) | 102, 1579, 3034 |
| AciI | CCGC | 3 cut(s) | 565, 568, 1270 |
| AclI | AACGTT | 2 cut(s) | 786, 873 |
| AclWI | GGATC | 3 cut(s) | 963, 2032, 3173 |
| AcuI | CTGAAG | 4 cut(s) | 549, 1117, 2206, 2711 |
| AcyI | GRCGYC | 2 cut(s) | 392, 3070 |
| AfaI | GTAC | 9 cut(s) | 439, 814, 942, 1394, 1639, 1689, 1969, 3147, 3157 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 889, 2186, 2327, 2468, 2609, 2882, 3168 |
| AflII | CTTAAG | 5 cut(s) | 2362, 2417, 2503, 2644, 2773 |
| AflIII | ACRYGT | 1 cut(s) | 1615 |
| AjnI | CCWGG | 3 cut(s) | 1573, 3358, 3448 |
| Alw21I | GWGCWC | 2 cut(s) | 20, 219 |
| Alw26I | GTCTC | 3 cut(s) | 353, 1485, 1994 |
| AlwI | GGATC | 3 cut(s) | 963, 2032, 3173 |
| Ama87I | CYCGRG | 1 cut(s) | 635 |
| AoxI | GGCC | 4 cut(s) | 1198, 2272, 2413, 2824 |
| ApeKI | GCWGC | 1 cut(s) | 2982 |
| AseI | ATTAAT | 2 cut(s) | 1185, 3288 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 625, 1779, 2598 |
| AsuC2I | CCSGG | 1 cut(s) | 95 |
| AsuHPI | GGTGA | 3 cut(s) | 469, 1568, 3151 |
| AsuII | TTCGAA | 2 cut(s) | 47, 512 |
| AvaI | CYCGRG | 1 cut(s) | 635 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 3193, 3226 |
| BanII | GRGCYC | 1 cut(s) | 219 |
| BbsI | GAAGAC | 3 cut(s) | 450, 818, 1979 |
| Bbv12I | GWGCWC | 2 cut(s) | 20, 219 |
| BbvI | GCAGC | 1 cut(s) | 2969 |
| BccI | CCATC | 8 cut(s) | 60, 376, 694, 762, 1325, 1828, 3127, 3190 |
| BceAI | ACGGC | 1 cut(s) | 1434 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1345, 1379 |
| BciT130I | CCWGG | 3 cut(s) | 1575, 3360, 3450 |
| BciVI | GTATCC | 2 cut(s) | 133, 499 |
| BclI | TGATCA | 1 cut(s) | 1309 |
| BcnI | CCSGG | 1 cut(s) | 95 |
| BcoDI | GTCTC | 3 cut(s) | 353, 1485, 1994 |
| BfrI | CTTAAG | 5 cut(s) | 2362, 2417, 2503, 2644, 2773 |
| BfuI | GTATCC | 2 cut(s) | 133, 499 |
| BisI | GCNGC | 3 cut(s) | 566, 1271, 2983 |
| BlpI | GCTNAGC | 2 cut(s) | 414, 729 |
| BlsI | GCNGC | 3 cut(s) | 567, 1272, 2984 |
| BmcAI | AGTACT | 1 cut(s) | 1969 |
| Bme1390I | CCNGG | 4 cut(s) | 95, 1575, 3360, 3450 |
| BmeT110I | CYCGRG | 1 cut(s) | 635 |
| BmrFI | CCNGG | 4 cut(s) | 95, 1575, 3360, 3450 |
| BmrI | ACTGGG | 2 cut(s) | 457, 705 |
| BmuI | ACTGGG | 2 cut(s) | 457, 705 |
| BpiI | GAAGAC | 3 cut(s) | 450, 818, 1979 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2129, 2161 |
| BpmI | CTGGAG | 3 cut(s) | 195, 1215, 1956 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 414, 729 |
| Bpu14I | TTCGAA | 2 cut(s) | 47, 512 |
| BpuEI | CTTGAG | 6 cut(s) | 1813, 1853, 2018, 2156, 2261, 3255 |
| BpuMI | CCSGG | 1 cut(s) | 95 |
| Bsa29I | ATCGAT | 1 cut(s) | 1938 |
| BsaAI | YACGTR | 1 cut(s) | 1616 |
| BsaBI | GATNNNNATC | 1 cut(s) | 954 |
| BsaHI | GRCGYC | 2 cut(s) | 392, 3070 |
| BsaJI | CCNNGG | 6 cut(s) | 94, 154, 408, 1723, 3358, 3448 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 889, 2186, 2327, 2468, 2609, 2882, 3168 |
| Bse118I | RCCGGY | 1 cut(s) | 346 |
| Bse1I | ACTGG | 2 cut(s) | 463, 700 |
| Bse3DI | GCAATG | 1 cut(s) | 3258 |
| Bse8I | GATNNNNATC | 1 cut(s) | 954 |
| BseBI | CCWGG | 3 cut(s) | 1575, 3360, 3450 |
| BseCI | ATCGAT | 1 cut(s) | 1938 |
| BseDI | CCNNGG | 6 cut(s) | 94, 154, 408, 1723, 3358, 3448 |
| BseGI | GGATG | 5 cut(s) | 705, 1102, 1521, 1820, 3182 |
| BseJI | GATNNNNATC | 1 cut(s) | 954 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 889, 2186, 2327, 2468, 2609, 2882, 3168 |
| BseMI | GCAATG | 1 cut(s) | 3258 |
| BseMII | CTCAG | 4 cut(s) | 316, 405, 1140, 1721 |
| BseNI | ACTGG | 2 cut(s) | 463, 700 |
| BseRI | GAGGAG | 4 cut(s) | 51, 1475, 1697, 2865 |
| BseXI | GCAGC | 1 cut(s) | 2969 |
| BsgI | GTGCAG | 1 cut(s) | 615 |
| Bsh1285I | CGRYCG | 4 cut(s) | 2238, 2379, 2661, 2790 |
| BshFI | GGCC | 4 cut(s) | 1200, 2274, 2415, 2826 |
| BshVI | ATCGAT | 1 cut(s) | 1938 |
| BsiEI | CGRYCG | 4 cut(s) | 2238, 2379, 2661, 2790 |
| BsiHKAI | GWGCWC | 2 cut(s) | 20, 219 |
| BsiHKCI | CYCGRG | 1 cut(s) | 635 |
| BsiSI | CCGG | 2 cut(s) | 94, 347 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 889, 2186, 2327, 2468, 2609, 2882, 3168 |
| BsmAI | GTCTC | 3 cut(s) | 353, 1485, 1994 |
| BsmBI | CGTCTC | 1 cut(s) | 1994 |
| BsmI | GAATGC | 2 cut(s) | 323, 508 |
| BsnI | GGCC | 4 cut(s) | 1200, 2274, 2415, 2826 |
| BsoBI | CYCGRG | 1 cut(s) | 635 |
| Bsp119I | TTCGAA | 2 cut(s) | 47, 512 |
| Bsp1286I | GDGCHC | 2 cut(s) | 20, 219 |
| Bsp1407I | TGTACA | 1 cut(s) | 3145 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 414, 729 |
| Bsp19I | CCATGG | 1 cut(s) | 1723 |
| BspACI | CCGC | 3 cut(s) | 565, 568, 1270 |
| BspANI | GGCC | 4 cut(s) | 1200, 2274, 2415, 2826 |
| BspCNI | CTCAG | 4 cut(s) | 315, 406, 1141, 1722 |
| BspDI | ATCGAT | 1 cut(s) | 1938 |
| BspHI | TCATGA | 2 cut(s) | 661, 1623 |
| BspPI | GGATC | 3 cut(s) | 963, 2032, 3173 |
| BspQI | GCTCTTC | 1 cut(s) | 1218 |
| BspT104I | TTCGAA | 2 cut(s) | 47, 512 |
| BspTI | CTTAAG | 5 cut(s) | 2362, 2417, 2503, 2644, 2773 |
| BsrBI | CCGCTC | 1 cut(s) | 1270 |
| BsrDI | GCAATG | 1 cut(s) | 3258 |
| BsrFI | RCCGGY | 1 cut(s) | 346 |
| BsrGI | TGTACA | 1 cut(s) | 3145 |
| BsrI | ACTGG | 2 cut(s) | 463, 700 |
| BssAI | RCCGGY | 1 cut(s) | 346 |
| BssECI | CCNNGG | 6 cut(s) | 94, 154, 408, 1723, 3358, 3448 |
| BssNI | GRCGYC | 2 cut(s) | 392, 3070 |
| BssT1I | CCWWGG | 3 cut(s) | 154, 408, 1723 |
| Bst2UI | CCWGG | 3 cut(s) | 1575, 3360, 3450 |
| Bst4CI | ACNGT | 2 cut(s) | 1170, 2096 |
| Bst6I | CTCTTC | 5 cut(s) | 1218, 1335, 2867, 2902, 3120 |
| BstACI | GRCGYC | 2 cut(s) | 392, 3070 |
| BstAFI | CTTAAG | 5 cut(s) | 2362, 2417, 2503, 2644, 2773 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 3051 |
| BstAUI | TGTACA | 1 cut(s) | 3145 |
| BstBAI | YACGTR | 1 cut(s) | 1616 |
| BstBI | TTCGAA | 2 cut(s) | 47, 512 |
| BstC8I | GCNNGC | 6 cut(s) | 579, 1124, 1128, 1268, 1670, 1707 |
| BstDSI | CCRYGG | 1 cut(s) | 1723 |
| BstEII | GGTNACC | 1 cut(s) | 457 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 3166 |
| BstF5I | GGATG | 5 cut(s) | 705, 1102, 1521, 1820, 3182 |
| BstMAI | GTCTC | 3 cut(s) | 353, 1485, 1994 |
| BstMCI | CGRYCG | 4 cut(s) | 2238, 2379, 2661, 2790 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 233, 398, 574, 665, 1054, 1267, 1652, 3051 |
| BstNI | CCWGG | 3 cut(s) | 1575, 3360, 3450 |
| BstNSI | RCATGY | 2 cut(s) | 1130, 1377 |
| BstPI | GGTNACC | 1 cut(s) | 457 |
| BstSCI | CCNGG | 4 cut(s) | 93, 1573, 3358, 3448 |
| BstV1I | GCAGC | 1 cut(s) | 2969 |
| BstV2I | GAAGAC | 3 cut(s) | 450, 818, 1979 |
| BstX2I | RGATCY | 2 cut(s) | 2037, 3178 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 409 |
| BstYI | RGATCY | 2 cut(s) | 2037, 3178 |
| Bsu15I | ATCGAT | 1 cut(s) | 1938 |
| BsuI | GTATCC | 2 cut(s) | 133, 499 |
| BsuRI | GGCC | 4 cut(s) | 1200, 2274, 2415, 2826 |
| BsuTUI | ATCGAT | 1 cut(s) | 1938 |
| BtgI | CCRYGG | 1 cut(s) | 1723 |
| BtgZI | GCGATG | 1 cut(s) | 222 |
| BtsCI | GGATG | 5 cut(s) | 705, 1102, 1521, 1820, 3182 |
| BtsI | GCAGTG | 1 cut(s) | 769 |
| BtsIMutI | CAGTG | 3 cut(s) | 470, 769, 2230 |
| Cac8I | GCNNGC | 6 cut(s) | 579, 1124, 1128, 1268, 1670, 1707 |
| CciI | TCATGA | 2 cut(s) | 661, 1623 |
| Cfr10I | RCCGGY | 1 cut(s) | 346 |
| ClaI | ATCGAT | 1 cut(s) | 1938 |
| CseI | GACGC | 4 cut(s) | 381, 598, 2828, 3059 |
| Csp6I | GTAC | 9 cut(s) | 438, 813, 941, 1393, 1638, 1688, 1968, 3146, 3156 |
| CviQI | GTAC | 9 cut(s) | 438, 813, 941, 1393, 1638, 1688, 1968, 3146, 3156 |
| Eam1104I | CTCTTC | 5 cut(s) | 1218, 1335, 2867, 2902, 3120 |
| EarI | CTCTTC | 5 cut(s) | 1218, 1335, 2867, 2902, 3120 |
| EciI | GGCGGA | 1 cut(s) | 583 |
| Ecl136II | GAGCTC | 1 cut(s) | 217 |
| Eco130I | CCWWGG | 3 cut(s) | 154, 408, 1723 |
| Eco147I | AGGCCT | 1 cut(s) | 1200 |
| Eco24I | GRGCYC | 1 cut(s) | 219 |
| Eco32I | GATATC | 1 cut(s) | 2965 |
| Eco53kI | GAGCTC | 1 cut(s) | 217 |
| Eco57I | CTGAAG | 4 cut(s) | 549, 1117, 2206, 2711 |
| Eco88I | CYCGRG | 1 cut(s) | 635 |
| Eco91I | GGTNACC | 1 cut(s) | 457 |
| EcoICRI | GAGCTC | 1 cut(s) | 217 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 3166 |
| EcoO65I | GGTNACC | 1 cut(s) | 457 |
| EcoRI | GAATTC | 1 cut(s) | 1742 |
| EcoRII | CCWGG | 3 cut(s) | 1573, 3358, 3448 |
| EcoRV | GATATC | 1 cut(s) | 2965 |
| EcoT14I | CCWWGG | 3 cut(s) | 154, 408, 1723 |
| EcoT22I | ATGCAT | 2 cut(s) | 323, 1521 |
| EcoT38I | GRGCYC | 1 cut(s) | 219 |
| ErhI | CCWWGG | 3 cut(s) | 154, 408, 1723 |
| Esp3I | CGTCTC | 1 cut(s) | 1994 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 899, 931 |
| FauNDI | CATATG | 2 cut(s) | 1511, 2196 |
| FbaI | TGATCA | 1 cut(s) | 1309 |
| FblI | GTMKAC | 3 cut(s) | 102, 1579, 3034 |
| Fnu4HI | GCNGC | 3 cut(s) | 566, 1271, 2983 |
| FokI | GGATG | 5 cut(s) | 712, 1109, 1528, 1807, 3169 |
| FriOI | GRGCYC | 1 cut(s) | 219 |
| Fsp4HI | GCNGC | 3 cut(s) | 566, 1271, 2983 |
| GluI | GCNGC | 3 cut(s) | 566, 1271, 2983 |
| GsuI | CTGGAG | 3 cut(s) | 195, 1215, 1956 |
| HaeIII | GGCC | 4 cut(s) | 1200, 2274, 2415, 2826 |
| HapII | CCGG | 2 cut(s) | 94, 347 |
| HgaI | GACGC | 4 cut(s) | 381, 598, 2828, 3059 |
| Hin1I | GRCGYC | 2 cut(s) | 392, 3070 |
| HindIII | AAGCTT | 1 cut(s) | 3062 |
| HpaII | CCGG | 2 cut(s) | 94, 347 |
| HphI | GGTGA | 3 cut(s) | 469, 1568, 3151 |
| Hpy166II | GTNNAC | 7 cut(s) | 103, 769, 1395, 1580, 2948, 3035, 3148 |
| Hpy8I | GTNNAC | 7 cut(s) | 103, 769, 1395, 1580, 2948, 3035, 3148 |
| HpyCH4III | ACNGT | 2 cut(s) | 1170, 2096 |
| HpyCH4IV | ACGT | 5 cut(s) | 786, 873, 1042, 1615, 2003 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 233, 398, 574, 665, 1054, 1267, 1652, 3051 |
| HpySE526I | ACGT | 5 cut(s) | 786, 873, 1042, 1615, 2003 |
| Hsp92I | GRCGYC | 2 cut(s) | 392, 3070 |
| Ksp22I | TGATCA | 1 cut(s) | 1309 |
| LguI | GCTCTTC | 1 cut(s) | 1218 |
| Lsp1109I | GCAGC | 1 cut(s) | 2969 |
| MaeII | ACGT | 5 cut(s) | 786, 873, 1042, 1615, 2003 |
| MaeIII | GTNAC | 3 cut(s) | 457, 878, 1024 |
| MbiI | CCGCTC | 1 cut(s) | 1270 |
| MfeI | CAATTG | 9 cut(s) | 148, 1647, 2256, 2397, 2538, 2679, 2808, 3151, 3321 |
| MflI | RGATCY | 2 cut(s) | 2037, 3178 |
| MhlI | GDGCHC | 2 cut(s) | 20, 219 |
| MlyI | GAGTC | 3 cut(s) | 1571, 2642, 2771 |
| MmeI | TCCRAC | 2 cut(s) | 598, 1859 |
| Mph1103I | ATGCAT | 2 cut(s) | 323, 1521 |
| MroXI | GAANNNNTTC | 3 cut(s) | 625, 1779, 2598 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1503, 1514 |
| MspCI | CTTAAG | 5 cut(s) | 2362, 2417, 2503, 2644, 2773 |
| MspI | CCGG | 2 cut(s) | 94, 347 |
| MspR9I | CCNGG | 4 cut(s) | 95, 1575, 3360, 3450 |
| MunI | CAATTG | 9 cut(s) | 148, 1647, 2256, 2397, 2538, 2679, 2808, 3151, 3321 |
| Mva1269I | GAATGC | 2 cut(s) | 323, 508 |
| MvaI | CCWGG | 3 cut(s) | 1575, 3360, 3450 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 233, 398, 574, 665, 1054, 1267, 1652, 3051 |
| NciI | CCSGG | 1 cut(s) | 95 |
| NcoI | CCATGG | 1 cut(s) | 1723 |
| NdeI | CATATG | 2 cut(s) | 1511, 2196 |
| NmuCI | GTSAC | 2 cut(s) | 457, 878 |
| NsiI | ATGCAT | 2 cut(s) | 323, 1521 |
| NspI | RCATGY | 2 cut(s) | 1130, 1377 |
| NspV | TTCGAA | 2 cut(s) | 47, 512 |
| PaeI | GCATGC | 1 cut(s) | 1130 |
| PaeR7I | CTCGAG | 1 cut(s) | 635 |
| PagI | TCATGA | 2 cut(s) | 661, 1623 |
| PceI | AGGCCT | 1 cut(s) | 1200 |
| PciSI | GCTCTTC | 1 cut(s) | 1218 |
| PctI | GAATGC | 2 cut(s) | 323, 508 |
| PdmI | GAANNNNTTC | 3 cut(s) | 625, 1779, 2598 |
| PflFI | GACNNNGTC | 1 cut(s) | 551 |
| PflMI | CCANNNNNTGG | 4 cut(s) | 2186, 2327, 2468, 2609 |
| PkrI | GCNGC | 3 cut(s) | 567, 1272, 2984 |
| Ple19I | CGATCG | 4 cut(s) | 2238, 2379, 2661, 2790 |
| PleI | GAGTC | 3 cut(s) | 1570, 2641, 2770 |
| PpsI | GAGTC | 3 cut(s) | 1570, 2641, 2770 |
| Ppu21I | YACGTR | 1 cut(s) | 1616 |
| PshBI | ATTAAT | 2 cut(s) | 1185, 3288 |
| Psp124BI | GAGCTC | 1 cut(s) | 219 |
| Psp1406I | AACGTT | 2 cut(s) | 786, 873 |
| Psp6I | CCWGG | 3 cut(s) | 1573, 3358, 3448 |
| PspEI | GGTNACC | 1 cut(s) | 457 |
| PspGI | CCWGG | 3 cut(s) | 1573, 3358, 3448 |
| PspXI | VCTCGAGB | 1 cut(s) | 635 |
| PsuI | RGATCY | 2 cut(s) | 2037, 3178 |
| PsyI | GACNNNGTC | 1 cut(s) | 551 |
| PvuI | CGATCG | 4 cut(s) | 2238, 2379, 2661, 2790 |
| RsaI | GTAC | 9 cut(s) | 439, 814, 942, 1394, 1639, 1689, 1969, 3147, 3157 |
| RsaNI | GTAC | 9 cut(s) | 438, 813, 941, 1393, 1638, 1688, 1968, 3146, 3156 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1503, 1514 |
| SacI | GAGCTC | 1 cut(s) | 219 |
| SapI | GCTCTTC | 1 cut(s) | 1218 |
| SatI | GCNGC | 3 cut(s) | 566, 1271, 2983 |
| ScaI | AGTACT | 1 cut(s) | 1969 |
| SchI | GAGTC | 3 cut(s) | 1571, 2642, 2771 |
| ScrFI | CCNGG | 4 cut(s) | 95, 1575, 3360, 3450 |
| SduI | GDGCHC | 2 cut(s) | 20, 219 |
| Sfr274I | CTCGAG | 1 cut(s) | 635 |
| SfuI | TTCGAA | 2 cut(s) | 47, 512 |
| SlaI | CTCGAG | 1 cut(s) | 635 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1503, 1514 |
| SphI | GCATGC | 1 cut(s) | 1130 |
| SseBI | AGGCCT | 1 cut(s) | 1200 |
| SsiI | CCGC | 3 cut(s) | 565, 568, 1270 |
| SspI | AATATT | 3 cut(s) | 865, 1178, 2834 |
| SstI | GAGCTC | 1 cut(s) | 219 |
| StuI | AGGCCT | 1 cut(s) | 1200 |
| StyD4I | CCNGG | 4 cut(s) | 93, 1573, 3358, 3448 |
| StyI | CCWWGG | 3 cut(s) | 154, 408, 1723 |
| TaaI | ACNGT | 2 cut(s) | 1170, 2096 |
| TaiI | ACGT | 5 cut(s) | 789, 876, 1045, 1618, 2006 |
| TatI | WGTACW | 5 cut(s) | 940, 1392, 1967, 3145, 3155 |
| TauI | GCSGC | 2 cut(s) | 568, 1273 |
| TscAI | CASTG | 3 cut(s) | 470, 776, 2230 |
| TseFI | GTSAC | 2 cut(s) | 457, 878 |
| TseI | GCWGC | 1 cut(s) | 2982 |
| Tsp45I | GTSAC | 2 cut(s) | 457, 878 |
| TspRI | CASTG | 3 cut(s) | 470, 776, 2230 |
| Tth111I | GACNNNGTC | 1 cut(s) | 551 |
| Van91I | CCANNNNNTGG | 4 cut(s) | 2186, 2327, 2468, 2609 |
| Vha464I | CTTAAG | 5 cut(s) | 2362, 2417, 2503, 2644, 2773 |
| VspI | ATTAAT | 2 cut(s) | 1185, 3288 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 3166 |
| XbaI | TCTAGA | 4 cut(s) | 2431, 2572, 2701, 2731 |
| XceI | RCATGY | 2 cut(s) | 1130, 1377 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 289 |
| XhoI | CTCGAG | 1 cut(s) | 635 |
| XmiI | GTMKAC | 3 cut(s) | 102, 1579, 3034 |
| XmnI | GAANNNNTTC | 3 cut(s) | 625, 1779, 2598 |
| ZrmI | AGTACT | 1 cut(s) | 1969 |
| Zsp2I | ATGCAT | 2 cut(s) | 323, 1521 |