TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| C-JID | PF20160 | 18 - 167 | 2.4e-13 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 127 |
| AclWI | GGATC | 2 cut(s) | 274, 365 |
| AcsI | RAATTY | 1 cut(s) | 63 |
| AcuI | CTGAAG | 3 cut(s) | 167, 207, 629 |
| AfaI | GTAC | 1 cut(s) | 6 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 484 |
| AgsI | TTSAA | 7 cut(s) | 40, 182, 209, 361, 457, 463, 628 |
| AjnI | CCWGG | 1 cut(s) | 318 |
| AluBI | AGCT | 3 cut(s) | 185, 200, 540 |
| AluI | AGCT | 3 cut(s) | 185, 200, 540 |
| AlwI | GGATC | 2 cut(s) | 274, 365 |
| AoxI | GGCC | 1 cut(s) | 316 |
| ApeKI | GCWGC | 2 cut(s) | 200, 537 |
| ApoI | RAATTY | 1 cut(s) | 63 |
| AspS9I | GGNCC | 2 cut(s) | 475, 646 |
| AsuC2I | CCSGG | 1 cut(s) | 54 |
| AsuHPI | GGTGA | 1 cut(s) | 326 |
| AvaII | GGWCC | 2 cut(s) | 475, 646 |
| BbvI | GCAGC | 2 cut(s) | 187, 549 |
| BceAI | ACGGC | 1 cut(s) | 188 |
| BciT130I | CCWGG | 1 cut(s) | 320 |
| BcnI | CCSGG | 1 cut(s) | 54 |
| BfaI | CTAG | 1 cut(s) | 375 |
| BfuAI | ACCTGC | 1 cut(s) | 127 |
| BglII | AGATCT | 1 cut(s) | 505 |
| BisI | GCNGC | 2 cut(s) | 201, 538 |
| BlsI | GCNGC | 2 cut(s) | 202, 539 |
| Bme1390I | CCNGG | 2 cut(s) | 54, 320 |
| Bme18I | GGWCC | 2 cut(s) | 475, 646 |
| BmgT120I | GGNCC | 2 cut(s) | 475, 646 |
| BmiI | GGNNCC | 2 cut(s) | 13, 476 |
| BmrFI | CCNGG | 2 cut(s) | 54, 320 |
| BmsI | GCATC | 1 cut(s) | 362 |
| BpuMI | CCSGG | 1 cut(s) | 54 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 87, 117 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 484 |
| BseBI | CCWGG | 1 cut(s) | 320 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 484 |
| BseMII | CTCAG | 2 cut(s) | 60, 696 |
| BseXI | GCAGC | 2 cut(s) | 187, 549 |
| BshFI | GGCC | 1 cut(s) | 318 |
| BsiSI | CCGG | 1 cut(s) | 54 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 484 |
| BsnI | GGCC | 1 cut(s) | 318 |
| Bsp143I | GATC | 5 cut(s) | 266, 331, 370, 505, 577 |
| BspANI | GGCC | 1 cut(s) | 318 |
| BspCNI | CTCAG | 2 cut(s) | 61, 695 |
| BspLI | GGNNCC | 2 cut(s) | 13, 476 |
| BspMI | ACCTGC | 1 cut(s) | 127 |
| BspPI | GGATC | 2 cut(s) | 274, 365 |
| BssMI | GATC | 5 cut(s) | 266, 331, 370, 505, 577 |
| Bst2UI | CCWGG | 1 cut(s) | 320 |
| Bst4CI | ACNGT | 2 cut(s) | 35, 91 |
| BstDEI | CTNAG | 2 cut(s) | 69, 682 |
| BstKTI | GATC | 5 cut(s) | 269, 334, 373, 508, 580 |
| BstMBI | GATC | 5 cut(s) | 266, 331, 370, 505, 577 |
| BstNI | CCWGG | 1 cut(s) | 320 |
| BstNSI | RCATGY | 1 cut(s) | 237 |
| BstSCI | CCNGG | 2 cut(s) | 52, 318 |
| BstV1I | GCAGC | 2 cut(s) | 187, 549 |
| BstX2I | RGATCY | 2 cut(s) | 266, 505 |
| BstYI | RGATCY | 2 cut(s) | 266, 505 |
| BsuRI | GGCC | 1 cut(s) | 318 |
| BtsIMutI | CAGTG | 2 cut(s) | 143, 159 |
| BveI | ACCTGC | 1 cut(s) | 127 |
| Cfr13I | GGNCC | 2 cut(s) | 475, 646 |
| Csp6I | GTAC | 1 cut(s) | 5 |
| CviAII | CATG | 4 cut(s) | 230, 234, 602, 672 |
| CviJI | RGCY | 6 cut(s) | 185, 200, 298, 318, 540, 557 |
| CviKI_1 | RGCY | 6 cut(s) | 185, 200, 298, 318, 540, 557 |
| CviQI | GTAC | 1 cut(s) | 5 |
| DdeI | CTNAG | 2 cut(s) | 69, 682 |
| DpnI | GATC | 5 cut(s) | 268, 333, 372, 507, 579 |
| DpnII | GATC | 5 cut(s) | 266, 331, 370, 505, 577 |
| DraI | TTTAAA | 1 cut(s) | 421 |
| Eco47I | GGWCC | 2 cut(s) | 475, 646 |
| Eco57I | CTGAAG | 3 cut(s) | 167, 207, 629 |
| EcoRII | CCWGG | 1 cut(s) | 318 |
| EcoT22I | ATGCAT | 2 cut(s) | 235, 355 |
| FaeI | CATG | 4 cut(s) | 233, 237, 605, 675 |
| FatI | CATG | 4 cut(s) | 229, 233, 601, 671 |
| Fnu4HI | GCNGC | 2 cut(s) | 201, 538 |
| Fsp4HI | GCNGC | 2 cut(s) | 201, 538 |
| FspBI | CTAG | 1 cut(s) | 375 |
| GluI | GCNGC | 2 cut(s) | 201, 538 |
| HaeIII | GGCC | 1 cut(s) | 318 |
| HapII | CCGG | 1 cut(s) | 54 |
| Hin1II | CATG | 4 cut(s) | 233, 237, 605, 675 |
| HincII | GTYRAC | 2 cut(s) | 276, 591 |
| HindII | GTYRAC | 2 cut(s) | 276, 591 |
| HinfI | GANTC | 2 cut(s) | 98, 676 |
| HpaII | CCGG | 1 cut(s) | 54 |
| HphI | GGTGA | 1 cut(s) | 326 |
| Hpy166II | GTNNAC | 4 cut(s) | 31, 276, 487, 591 |
| Hpy188I | TCNGA | 3 cut(s) | 331, 636, 669 |
| Hpy188III | TCNNGA | 3 cut(s) | 68, 548, 581 |
| Hpy8I | GTNNAC | 4 cut(s) | 31, 276, 487, 591 |
| HpyAV | CCTTC | 1 cut(s) | 257 |
| HpyCH4III | ACNGT | 2 cut(s) | 35, 91 |
| HpyCH4V | TGCA | 3 cut(s) | 112, 233, 353 |
| HpyF3I | CTNAG | 2 cut(s) | 69, 682 |
| Hsp92II | CATG | 4 cut(s) | 233, 237, 605, 675 |
| Kzo9I | GATC | 5 cut(s) | 266, 331, 370, 505, 577 |
| LpnPI | CCDG | 7 cut(s) | 67, 81, 132, 210, 305, 332, 629 |
| Lsp1109I | GCAGC | 2 cut(s) | 187, 549 |
| LweI | GCATC | 1 cut(s) | 362 |
| MaeI | CTAG | 1 cut(s) | 375 |
| MaeIII | GTNAC | 3 cut(s) | 46, 141, 342 |
| MalI | GATC | 5 cut(s) | 268, 333, 372, 507, 579 |
| MboI | GATC | 5 cut(s) | 266, 331, 370, 505, 577 |
| MboII | GAAGA | 2 cut(s) | 200, 475 |
| MfeI | CAATTG | 1 cut(s) | 623 |
| MflI | RGATCY | 2 cut(s) | 266, 505 |
| MluCI | AATT | 4 cut(s) | 63, 240, 379, 623 |
| MmeI | TCCRAC | 1 cut(s) | 555 |
| MnlI | CCTC | 3 cut(s) | 27, 289, 578 |
| Mph1103I | ATGCAT | 2 cut(s) | 235, 355 |
| MseI | TTAA | 3 cut(s) | 243, 420, 510 |
| MslI | CAYNNNNRTG | 1 cut(s) | 234 |
| MspA1I | CMGCKG | 1 cut(s) | 200 |
| MspI | CCGG | 1 cut(s) | 54 |
| MspR9I | CCNGG | 2 cut(s) | 54, 320 |
| MunI | CAATTG | 1 cut(s) | 623 |
| MvaI | CCWGG | 1 cut(s) | 320 |
| NciI | CCSGG | 1 cut(s) | 54 |
| NdeII | GATC | 5 cut(s) | 266, 331, 370, 505, 577 |
| NlaIII | CATG | 4 cut(s) | 233, 237, 605, 675 |
| NlaIV | GGNNCC | 2 cut(s) | 13, 476 |
| NmuCI | GTSAC | 1 cut(s) | 141 |
| NsiI | ATGCAT | 2 cut(s) | 235, 355 |
| NspI | RCATGY | 1 cut(s) | 237 |
| PfeI | GAWTC | 2 cut(s) | 98, 676 |
| PfoI | TCCNGGA | 1 cut(s) | 52 |
| PkrI | GCNGC | 2 cut(s) | 202, 539 |
| Psp6I | CCWGG | 1 cut(s) | 318 |
| PspGI | CCWGG | 1 cut(s) | 318 |
| PspN4I | GGNNCC | 2 cut(s) | 13, 476 |
| PspPI | GGNCC | 2 cut(s) | 475, 646 |
| PsuI | RGATCY | 2 cut(s) | 266, 505 |
| PvuII | CAGCTG | 1 cut(s) | 200 |
| RsaI | GTAC | 1 cut(s) | 6 |
| RsaNI | GTAC | 1 cut(s) | 5 |
| RseI | CAYNNNNRTG | 1 cut(s) | 234 |
| SaqAI | TTAA | 3 cut(s) | 243, 420, 510 |
| SatI | GCNGC | 2 cut(s) | 201, 538 |
| Sau3AI | GATC | 5 cut(s) | 266, 331, 370, 505, 577 |
| Sau96I | GGNCC | 2 cut(s) | 475, 646 |
| ScrFI | CCNGG | 2 cut(s) | 54, 320 |
| SetI | ASST | 9 cut(s) | 121, 187, 202, 281, 324, 339, 428, 542, 570 |
| SfaNI | GCATC | 1 cut(s) | 362 |
| SinI | GGWCC | 2 cut(s) | 475, 646 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 234 |
| Sse9I | AATT | 4 cut(s) | 63, 240, 379, 623 |
| SspI | AATATT | 1 cut(s) | 43 |
| SspMI | CTAG | 1 cut(s) | 375 |
| StyD4I | CCNGG | 2 cut(s) | 52, 318 |
| TaaI | ACNGT | 2 cut(s) | 35, 91 |
| TaqI | TCGA | 1 cut(s) | 549 |
| TasI | AATT | 4 cut(s) | 63, 240, 379, 623 |
| TfiI | GAWTC | 2 cut(s) | 98, 676 |
| Tru1I | TTAA | 3 cut(s) | 243, 420, 510 |
| Tru9I | TTAA | 3 cut(s) | 243, 420, 510 |
| TscAI | CASTG | 2 cut(s) | 150, 159 |
| TseFI | GTSAC | 1 cut(s) | 141 |
| TseI | GCWGC | 2 cut(s) | 200, 537 |
| Tsp45I | GTSAC | 1 cut(s) | 141 |
| TspDTI | ATGAA | 4 cut(s) | 293, 405, 536, 590 |
| TspGWI | ACGGA | 1 cut(s) | 467 |
| TspRI | CASTG | 2 cut(s) | 150, 159 |
| VpaK11BI | GGWCC | 2 cut(s) | 475, 646 |
| XapI | RAATTY | 1 cut(s) | 63 |
| XceI | RCATGY | 1 cut(s) | 237 |
| XspI | CTAG | 1 cut(s) | 375 |
| Zsp2I | ATGCAT | 2 cut(s) | 235, 355 |