TMV resistance protein N-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 47 |
| AcsI | RAATTY | 2 cut(s) | 109, 199 |
| AcyI | GRCGYC | 1 cut(s) | 427 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 56, 134 |
| AgsI | TTSAA | 4 cut(s) | 116, 170, 266, 434 |
| AjiI | CACGTC | 1 cut(s) | 283 |
| AjnI | CCWGG | 1 cut(s) | 11 |
| AluBI | AGCT | 3 cut(s) | 140, 250, 491 |
| AluI | AGCT | 3 cut(s) | 140, 250, 491 |
| Alw21I | GWGCWC | 1 cut(s) | 142 |
| Ama87I | CYCGRG | 1 cut(s) | 141 |
| AoxI | GGCC | 1 cut(s) | 125 |
| ApeKI | GCWGC | 1 cut(s) | 394 |
| ApoI | RAATTY | 2 cut(s) | 109, 199 |
| AspLEI | GCGC | 1 cut(s) | 530 |
| AspS9I | GGNCC | 4 cut(s) | 125, 298, 343, 533 |
| AsuHPI | GGTGA | 1 cut(s) | 458 |
| AvaI | CYCGRG | 1 cut(s) | 141 |
| AvaII | GGWCC | 3 cut(s) | 298, 343, 533 |
| BanII | GRGCYC | 1 cut(s) | 142 |
| Bbv12I | GWGCWC | 1 cut(s) | 142 |
| BbvI | GCAGC | 1 cut(s) | 406 |
| BccI | CCATC | 1 cut(s) | 437 |
| BceAI | ACGGC | 1 cut(s) | 541 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 446, 480 |
| BciT130I | CCWGG | 1 cut(s) | 13 |
| BfaI | CTAG | 1 cut(s) | 474 |
| BisI | GCNGC | 2 cut(s) | 47, 395 |
| BlsI | GCNGC | 2 cut(s) | 48, 396 |
| Bme1390I | CCNGG | 1 cut(s) | 13 |
| Bme18I | GGWCC | 3 cut(s) | 298, 343, 533 |
| BmeT110I | CYCGRG | 1 cut(s) | 141 |
| BmgBI | CACGTC | 1 cut(s) | 283 |
| BmgT120I | GGNCC | 4 cut(s) | 125, 298, 343, 533 |
| BmiI | GGNNCC | 4 cut(s) | 344, 375, 535, 544 |
| BmrFI | CCNGG | 1 cut(s) | 13 |
| BmrI | ACTGGG | 1 cut(s) | 531 |
| BmsI | GCATC | 3 cut(s) | 355, 454, 476 |
| BmuI | ACTGGG | 1 cut(s) | 531 |
| BsaHI | GRCGYC | 1 cut(s) | 427 |
| BsaJI | CCNNGG | 1 cut(s) | 50 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 56, 134 |
| Bse1I | ACTGG | 1 cut(s) | 537 |
| Bse3DI | GCAATG | 1 cut(s) | 409 |
| BseBI | CCWGG | 1 cut(s) | 13 |
| BseDI | CCNNGG | 1 cut(s) | 50 |
| BseGI | GGATG | 2 cut(s) | 66, 493 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 56, 134 |
| BseMI | GCAATG | 1 cut(s) | 409 |
| BseNI | ACTGG | 1 cut(s) | 537 |
| BseRI | GAGGAG | 1 cut(s) | 386 |
| BseXI | GCAGC | 1 cut(s) | 406 |
| BseYI | CCCAGC | 1 cut(s) | 56 |
| BshFI | GGCC | 1 cut(s) | 127 |
| BsiHKAI | GWGCWC | 1 cut(s) | 142 |
| BsiHKCI | CYCGRG | 1 cut(s) | 141 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 56, 134 |
| BsnI | GGCC | 1 cut(s) | 127 |
| BsoBI | CYCGRG | 1 cut(s) | 141 |
| Bsp1286I | GDGCHC | 1 cut(s) | 142 |
| Bsp143I | GATC | 1 cut(s) | 181 |
| BspACI | CCGC | 1 cut(s) | 47 |
| BspANI | GGCC | 1 cut(s) | 127 |
| BspHI | TCATGA | 1 cut(s) | 554 |
| BspLI | GGNNCC | 4 cut(s) | 344, 375, 535, 544 |
| BsrDI | GCAATG | 1 cut(s) | 409 |
| BsrI | ACTGG | 1 cut(s) | 537 |
| BssECI | CCNNGG | 1 cut(s) | 50 |
| BssMI | GATC | 1 cut(s) | 181 |
| BssNI | GRCGYC | 1 cut(s) | 427 |
| BssT1I | CCWWGG | 1 cut(s) | 50 |
| Bst2UI | CCWGG | 1 cut(s) | 13 |
| Bst4CI | ACNGT | 1 cut(s) | 209 |
| BstACI | GRCGYC | 1 cut(s) | 427 |
| BstC8I | GCNNGC | 1 cut(s) | 101 |
| BstF5I | GGATG | 2 cut(s) | 66, 493 |
| BstHHI | GCGC | 1 cut(s) | 530 |
| BstKTI | GATC | 1 cut(s) | 184 |
| BstMBI | GATC | 1 cut(s) | 181 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 408, 488 |
| BstNI | CCWGG | 1 cut(s) | 13 |
| BstNSI | RCATGY | 1 cut(s) | 103 |
| BstSCI | CCNGG | 1 cut(s) | 11 |
| BstV1I | GCAGC | 1 cut(s) | 406 |
| BsuRI | GGCC | 1 cut(s) | 127 |
| BtrI | CACGTC | 1 cut(s) | 283 |
| BtsCI | GGATG | 2 cut(s) | 66, 493 |
| BtsIMutI | CAGTG | 1 cut(s) | 544 |
| Cac8I | GCNNGC | 1 cut(s) | 101 |
| CciI | TCATGA | 1 cut(s) | 554 |
| CfoI | GCGC | 1 cut(s) | 530 |
| Cfr13I | GGNCC | 4 cut(s) | 125, 298, 343, 533 |
| CseI | GACGC | 1 cut(s) | 435 |
| CviAII | CATG | 3 cut(s) | 100, 224, 555 |
| CviJI | RGCY | 7 cut(s) | 46, 56, 127, 140, 250, 376, 491 |
| CviKI_1 | RGCY | 7 cut(s) | 46, 56, 127, 140, 250, 376, 491 |
| DpnI | GATC | 1 cut(s) | 183 |
| DpnII | GATC | 1 cut(s) | 181 |
| Ecl136II | GAGCTC | 1 cut(s) | 140 |
| Eco130I | CCWWGG | 1 cut(s) | 50 |
| Eco24I | GRGCYC | 1 cut(s) | 142 |
| Eco32I | GATATC | 1 cut(s) | 238 |
| Eco47I | GGWCC | 3 cut(s) | 298, 343, 533 |
| Eco53kI | GAGCTC | 1 cut(s) | 140 |
| Eco88I | CYCGRG | 1 cut(s) | 141 |
| EcoICRI | GAGCTC | 1 cut(s) | 140 |
| EcoO109I | RGGNCCY | 1 cut(s) | 533 |
| EcoRII | CCWGG | 1 cut(s) | 11 |
| EcoRV | GATATC | 1 cut(s) | 238 |
| EcoT14I | CCWWGG | 1 cut(s) | 50 |
| EcoT22I | ATGCAT | 1 cut(s) | 469 |
| EcoT38I | GRGCYC | 1 cut(s) | 142 |
| ErhI | CCWWGG | 1 cut(s) | 50 |
| FaeI | CATG | 3 cut(s) | 103, 227, 558 |
| FaiI | YATR | 9 cut(s) | 101, 162, 225, 312, 350, 355, 357, 441, 556 |
| FatI | CATG | 3 cut(s) | 99, 223, 554 |
| Fnu4HI | GCNGC | 2 cut(s) | 47, 395 |
| FokI | GGATG | 2 cut(s) | 73, 480 |
| FriOI | GRGCYC | 1 cut(s) | 142 |
| Fsp4HI | GCNGC | 2 cut(s) | 47, 395 |
| FspBI | CTAG | 1 cut(s) | 474 |
| GlaI | GCGC | 1 cut(s) | 529 |
| GluI | GCNGC | 2 cut(s) | 47, 395 |
| GsaI | CCCAGC | 1 cut(s) | 60 |
| HaeIII | GGCC | 1 cut(s) | 127 |
| HgaI | GACGC | 1 cut(s) | 435 |
| HhaI | GCGC | 1 cut(s) | 530 |
| Hin1I | GRCGYC | 1 cut(s) | 427 |
| Hin1II | CATG | 3 cut(s) | 103, 227, 558 |
| Hin6I | GCGC | 1 cut(s) | 528 |
| HinP1I | GCGC | 1 cut(s) | 528 |
| HinfI | GANTC | 2 cut(s) | 6, 30 |
| HphI | GGTGA | 1 cut(s) | 458 |
| Hpy188I | TCNGA | 2 cut(s) | 181, 186 |
| Hpy188III | TCNNGA | 2 cut(s) | 143, 555 |
| Hpy99I | CGWCG | 4 cut(s) | 284, 429, 461, 464 |
| HpyAV | CCTTC | 1 cut(s) | 440 |
| HpyCH4III | ACNGT | 1 cut(s) | 209 |
| HpyCH4IV | ACGT | 1 cut(s) | 282 |
| HpyCH4V | TGCA | 8 cut(s) | 75, 164, 205, 219, 368, 394, 467, 482 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 408, 488 |
| HpySE526I | ACGT | 1 cut(s) | 282 |
| Hsp92I | GRCGYC | 1 cut(s) | 427 |
| Hsp92II | CATG | 3 cut(s) | 103, 227, 558 |
| HspAI | GCGC | 1 cut(s) | 528 |
| Kzo9I | GATC | 1 cut(s) | 181 |
| LmnI | GCTCC | 2 cut(s) | 137, 373 |
| LpnPI | CCDG | 6 cut(s) | 25, 42, 141, 186, 516, 550 |
| Lsp1109I | GCAGC | 1 cut(s) | 406 |
| LweI | GCATC | 3 cut(s) | 355, 454, 476 |
| MaeI | CTAG | 1 cut(s) | 474 |
| MaeII | ACGT | 1 cut(s) | 282 |
| MalI | GATC | 1 cut(s) | 183 |
| MboI | GATC | 1 cut(s) | 181 |
| MboII | GAAGA | 2 cut(s) | 343, 374 |
| MfeI | CAATTG | 2 cut(s) | 165, 261 |
| MhlI | GDGCHC | 1 cut(s) | 142 |
| MluCI | AATT | 6 cut(s) | 70, 109, 116, 165, 199, 261 |
| MnlI | CCTC | 4 cut(s) | 44, 289, 352, 364 |
| Mph1103I | ATGCAT | 1 cut(s) | 469 |
| MseI | TTAA | 2 cut(s) | 69, 107 |
| MslI | CAYNNNNRTG | 2 cut(s) | 281, 441 |
| MspR9I | CCNGG | 1 cut(s) | 13 |
| MunI | CAATTG | 2 cut(s) | 165, 261 |
| MvaI | CCWGG | 1 cut(s) | 13 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 408, 488 |
| NdeII | GATC | 1 cut(s) | 181 |
| NlaIII | CATG | 3 cut(s) | 103, 227, 558 |
| NlaIV | GGNNCC | 4 cut(s) | 344, 375, 535, 544 |
| NsiI | ATGCAT | 1 cut(s) | 469 |
| NspI | RCATGY | 1 cut(s) | 103 |
| PaeI | GCATGC | 1 cut(s) | 103 |
| PaeR7I | CTCGAG | 1 cut(s) | 141 |
| PagI | TCATGA | 1 cut(s) | 554 |
| PfeI | GAWTC | 2 cut(s) | 6, 30 |
| PkrI | GCNGC | 2 cut(s) | 48, 396 |
| PpuMI | RGGWCCY | 1 cut(s) | 533 |
| Psp124BI | GAGCTC | 1 cut(s) | 142 |
| Psp5II | RGGWCCY | 1 cut(s) | 533 |
| Psp6I | CCWGG | 1 cut(s) | 11 |
| PspFI | CCCAGC | 1 cut(s) | 56 |
| PspGI | CCWGG | 1 cut(s) | 11 |
| PspN4I | GGNNCC | 4 cut(s) | 344, 375, 535, 544 |
| PspPI | GGNCC | 4 cut(s) | 125, 298, 343, 533 |
| PspPPI | RGGWCCY | 1 cut(s) | 533 |
| RseI | CAYNNNNRTG | 2 cut(s) | 281, 441 |
| SacI | GAGCTC | 1 cut(s) | 142 |
| SaqAI | TTAA | 2 cut(s) | 69, 107 |
| SatI | GCNGC | 2 cut(s) | 47, 395 |
| Sau3AI | GATC | 1 cut(s) | 181 |
| Sau96I | GGNCC | 4 cut(s) | 125, 298, 343, 533 |
| ScrFI | CCNGG | 1 cut(s) | 13 |
| SduI | GDGCHC | 1 cut(s) | 142 |
| SetI | ASST | 6 cut(s) | 142, 175, 252, 285, 493, 522 |
| SfaNI | GCATC | 3 cut(s) | 355, 454, 476 |
| Sfr274I | CTCGAG | 1 cut(s) | 141 |
| SinI | GGWCC | 3 cut(s) | 298, 343, 533 |
| SlaI | CTCGAG | 1 cut(s) | 141 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 281, 441 |
| SmlI | CTYRAG | 1 cut(s) | 141 |
| SmoI | CTYRAG | 1 cut(s) | 141 |
| SphI | GCATGC | 1 cut(s) | 103 |
| Sse9I | AATT | 6 cut(s) | 70, 109, 116, 165, 199, 261 |
| SsiI | CCGC | 1 cut(s) | 47 |
| SspMI | CTAG | 1 cut(s) | 474 |
| SstI | GAGCTC | 1 cut(s) | 142 |
| StyD4I | CCNGG | 1 cut(s) | 11 |
| StyI | CCWWGG | 1 cut(s) | 50 |
| TaaI | ACNGT | 1 cut(s) | 209 |
| TaiI | ACGT | 1 cut(s) | 285 |
| TaqI | TCGA | 3 cut(s) | 142, 197, 279 |
| TaqII | GACCGA | 1 cut(s) | 315 |
| TasI | AATT | 6 cut(s) | 70, 109, 116, 165, 199, 261 |
| TauI | GCSGC | 1 cut(s) | 49 |
| TfiI | GAWTC | 2 cut(s) | 6, 30 |
| Tru1I | TTAA | 2 cut(s) | 69, 107 |
| Tru9I | TTAA | 2 cut(s) | 69, 107 |
| TscAI | CASTG | 1 cut(s) | 544 |
| TseI | GCWGC | 1 cut(s) | 394 |
| TspDTI | ATGAA | 2 cut(s) | 521, 543 |
| TspGWI | ACGGA | 1 cut(s) | 335 |
| TspRI | CASTG | 1 cut(s) | 544 |
| VpaK11BI | GGWCC | 3 cut(s) | 298, 343, 533 |
| XapI | RAATTY | 2 cut(s) | 109, 199 |
| XceI | RCATGY | 1 cut(s) | 103 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 48 |
| XhoI | CTCGAG | 1 cut(s) | 141 |
| XspI | CTAG | 1 cut(s) | 474 |
| Zsp2I | ATGCAT | 1 cut(s) | 469 |