TMV resistance protein N-like
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 513 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 2102, 3151 |
| AccBSI | CCGCTC | 2 cut(s) | 2846, 3128 |
| AccII | CGCG | 2 cut(s) | 1479, 2898 |
| AccIII | TCCGGA | 2 cut(s) | 205, 2992 |
| AciI | CCGC | 7 cut(s) | 103, 2148, 2623, 2844, 2896, 2898, 3126 |
| AclWI | GGATC | 7 cut(s) | 356, 369, 1863, 1879, 2661, 2861, 3003 |
| AcoI | YGGCCR | 3 cut(s) | 480, 1763, 2841 |
| AcuI | CTGAAG | 4 cut(s) | 420, 1805, 2279, 2591 |
| AdeI | CACNNNGTG | 1 cut(s) | 282 |
| AfaI | GTAC | 9 cut(s) | 143, 1183, 1412, 1552, 1782, 2242, 2612, 3010, 3305 |
| AflII | CTTAAG | 1 cut(s) | 2300 |
| AflIII | ACRYGT | 1 cut(s) | 958 |
| AhlI | ACTAGT | 1 cut(s) | 733 |
| AjnI | CCWGG | 3 cut(s) | 1486, 2923, 3195 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1262, 1294, 2169, 2201 |
| Alw21I | GWGCWC | 5 cut(s) | 14, 196, 213, 966, 1032 |
| Alw26I | GTCTC | 5 cut(s) | 121, 2228, 2237, 2268, 2321 |
| AlwI | GGATC | 7 cut(s) | 356, 369, 1863, 1879, 2661, 2861, 3003 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2336 |
| Ama87I | CYCGRG | 1 cut(s) | 2236 |
| Aor13HI | TCCGGA | 2 cut(s) | 205, 2992 |
| AoxI | GGCC | 5 cut(s) | 21, 480, 1763, 2188, 2841 |
| ApeKI | GCWGC | 2 cut(s) | 1497, 3210 |
| AseI | ATTAAT | 1 cut(s) | 3249 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 781, 1274, 1461, 2821 |
| AspLEI | GCGC | 1 cut(s) | 2757 |
| AspS9I | GGNCC | 4 cut(s) | 21, 1954, 2145, 2900 |
| AsuC2I | CCSGG | 3 cut(s) | 2237, 2238, 2507 |
| AsuHPI | GGTGA | 4 cut(s) | 104, 249, 932, 1318 |
| AsuII | TTCGAA | 1 cut(s) | 2880 |
| AvaI | CYCGRG | 1 cut(s) | 2236 |
| AvaII | GGWCC | 3 cut(s) | 1954, 2145, 2900 |
| AxyI | CCTNAGG | 1 cut(s) | 588 |
| BaeGI | GKGCMC | 1 cut(s) | 3029 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 125, 158 |
| BalI | TGGCCA | 1 cut(s) | 482 |
| BamHI | GGATCC | 1 cut(s) | 361 |
| BanII | GRGCYC | 5 cut(s) | 196, 213, 1032, 2393, 3295 |
| BauI | CACGAG | 1 cut(s) | 33 |
| BbsI | GAAGAC | 4 cut(s) | 102, 1484, 1831, 2567 |
| Bbv12I | GWGCWC | 5 cut(s) | 14, 196, 213, 966, 1032 |
| BbvI | GCAGC | 2 cut(s) | 1509, 3197 |
| BceAI | ACGGC | 2 cut(s) | 1485, 2259 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 94, 128 |
| BciT130I | CCWGG | 3 cut(s) | 1488, 2925, 3197 |
| BciVI | GTATCC | 2 cut(s) | 1743, 3193 |
| BclI | TGATCA | 1 cut(s) | 1405 |
| BcnI | CCSGG | 3 cut(s) | 2237, 2238, 2507 |
| BcoDI | GTCTC | 5 cut(s) | 121, 2228, 2237, 2268, 2321 |
| BcuI | ACTAGT | 1 cut(s) | 733 |
| BfmI | CTRYAG | 2 cut(s) | 137, 2310 |
| BfoI | RGCGCY | 1 cut(s) | 2758 |
| BfrI | CTTAAG | 1 cut(s) | 2300 |
| BfuI | GTATCC | 2 cut(s) | 1743, 3193 |
| BisI | GCNGC | 3 cut(s) | 1498, 2844, 3211 |
| BlsI | GCNGC | 3 cut(s) | 1499, 2845, 3212 |
| Bme1390I | CCNGG | 6 cut(s) | 1488, 2237, 2238, 2507, 2925, 3197 |
| Bme18I | GGWCC | 3 cut(s) | 1954, 2145, 2900 |
| BmeT110I | CYCGRG | 1 cut(s) | 2236 |
| BmgT120I | GGNCC | 4 cut(s) | 21, 1954, 2145, 2900 |
| BmiI | GGNNCC | 4 cut(s) | 363, 811, 1485, 2146 |
| BmrFI | CCNGG | 6 cut(s) | 1488, 2237, 2238, 2507, 2925, 3197 |
| BmrI | ACTGGG | 1 cut(s) | 52 |
| BmuI | ACTGGG | 1 cut(s) | 52 |
| BpiI | GAAGAC | 4 cut(s) | 102, 1484, 1831, 2567 |
| BpmI | CTGGAG | 1 cut(s) | 2210 |
| Bpu10I | CCTNAGC | 3 cut(s) | 2831, 2847, 3129 |
| Bpu14I | TTCGAA | 1 cut(s) | 2880 |
| BpuEI | CTTGAG | 6 cut(s) | 100, 235, 1046, 1729, 1934, 2039 |
| BpuMI | CCSGG | 3 cut(s) | 2237, 2238, 2507 |
| BsaAI | YACGTR | 2 cut(s) | 2033, 2768 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2490 |
| BsaJI | CCNNGG | 4 cut(s) | 315, 2236, 2447, 2896 |
| BsaWI | WCCGGW | 3 cut(s) | 205, 2650, 2992 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 8, 38, 2318, 2348, 2640, 2670 |
| Bse118I | RCCGGY | 3 cut(s) | 144, 343, 3050 |
| Bse1I | ACTGG | 3 cut(s) | 58, 2200, 2948 |
| Bse21I | CCTNAGG | 1 cut(s) | 588 |
| Bse3DI | GCAATG | 2 cut(s) | 1284, 1965 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2490 |
| BseAI | TCCGGA | 2 cut(s) | 205, 2992 |
| BseBI | CCWGG | 3 cut(s) | 1488, 2925, 3197 |
| BseDI | CCNNGG | 4 cut(s) | 315, 2236, 2447, 2896 |
| BseJI | GATNNNNATC | 1 cut(s) | 2490 |
| BseMI | GCAATG | 2 cut(s) | 1284, 1965 |
| BseMII | CTCAG | 7 cut(s) | 579, 687, 777, 2077, 2145, 2861, 3143 |
| BseNI | ACTGG | 3 cut(s) | 58, 2200, 2948 |
| BseRI | GAGGAG | 6 cut(s) | 16, 605, 1184, 1496, 1931, 3317 |
| BseSI | GKGCMC | 1 cut(s) | 3029 |
| BseXI | GCAGC | 2 cut(s) | 1509, 3197 |
| BseYI | CCCAGC | 1 cut(s) | 2347 |
| Bsh1236I | CGCG | 2 cut(s) | 1479, 2898 |
| Bsh1285I | CGRYCG | 1 cut(s) | 175 |
| BshFI | GGCC | 5 cut(s) | 23, 482, 1765, 2190, 2843 |
| BsiEI | CGRYCG | 1 cut(s) | 175 |
| BsiHKAI | GWGCWC | 5 cut(s) | 14, 196, 213, 966, 1032 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2236 |
| BslFI | GGGAC | 3 cut(s) | 1670, 1832, 2158 |
| BsmAI | GTCTC | 5 cut(s) | 121, 2228, 2237, 2268, 2321 |
| BsmBI | CGTCTC | 1 cut(s) | 121 |
| BsmFI | GGGAC | 3 cut(s) | 1670, 1832, 2158 |
| BsmI | GAATGC | 3 cut(s) | 1289, 1628, 2888 |
| BsnI | GGCC | 5 cut(s) | 23, 482, 1765, 2190, 2843 |
| BsoBI | CYCGRG | 1 cut(s) | 2236 |
| Bsp119I | TTCGAA | 1 cut(s) | 2880 |
| Bsp1286I | GDGCHC | 8 cut(s) | 14, 196, 213, 966, 1032, 2393, 3029, 3295 |
| Bsp13I | TCCGGA | 2 cut(s) | 205, 2992 |
| Bsp1407I | TGTACA | 1 cut(s) | 3008 |
| Bsp19I | CCATGG | 1 cut(s) | 315 |
| Bsp68I | TCGCGA | 1 cut(s) | 1479 |
| BspACI | CCGC | 7 cut(s) | 103, 2148, 2623, 2844, 2896, 2898, 3126 |
| BspANI | GGCC | 5 cut(s) | 23, 482, 1765, 2190, 2843 |
| BspCNI | CTCAG | 7 cut(s) | 580, 688, 776, 2076, 2146, 2860, 3142 |
| BspEI | TCCGGA | 2 cut(s) | 205, 2992 |
| BspFNI | CGCG | 2 cut(s) | 1479, 2898 |
| BspLI | GGNNCC | 4 cut(s) | 363, 811, 1485, 2146 |
| BspMAI | CTGCAG | 1 cut(s) | 141 |
| BspPI | GGATC | 7 cut(s) | 356, 369, 1863, 1879, 2661, 2861, 3003 |
| BspQI | GCTCTTC | 2 cut(s) | 383, 3275 |
| BspT104I | TTCGAA | 1 cut(s) | 2880 |
| BspTI | CTTAAG | 1 cut(s) | 2300 |
| BsrBI | CCGCTC | 2 cut(s) | 2846, 3128 |
| BsrDI | GCAATG | 2 cut(s) | 1284, 1965 |
| BsrFI | RCCGGY | 3 cut(s) | 144, 343, 3050 |
| BsrGI | TGTACA | 1 cut(s) | 3008 |
| BsrI | ACTGG | 3 cut(s) | 58, 2200, 2948 |
| BssAI | RCCGGY | 3 cut(s) | 144, 343, 3050 |
| BssECI | CCNNGG | 4 cut(s) | 315, 2236, 2447, 2896 |
| BssSI | CACGAG | 1 cut(s) | 33 |
| BssT1I | CCWWGG | 1 cut(s) | 315 |
| Bst2BI | CACGAG | 1 cut(s) | 33 |
| Bst2UI | CCWGG | 3 cut(s) | 1488, 2925, 3197 |
| Bst4CI | ACNGT | 6 cut(s) | 1575, 1943, 1992, 2332, 2980, 3031 |
| Bst6I | CTCTTC | 6 cut(s) | 383, 1590, 1752, 2271, 2874, 3275 |
| BstAFI | CTTAAG | 1 cut(s) | 2300 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2592 |
| BstAUI | TGTACA | 1 cut(s) | 3008 |
| BstBAI | YACGTR | 2 cut(s) | 2033, 2768 |
| BstBI | TTCGAA | 1 cut(s) | 2880 |
| BstC8I | GCNNGC | 3 cut(s) | 1776, 2077, 2584 |
| BstDSI | CCRYGG | 2 cut(s) | 315, 2896 |
| BstFNI | CGCG | 2 cut(s) | 1479, 2898 |
| BstH2I | RGCGCY | 1 cut(s) | 2758 |
| BstHHI | GCGC | 1 cut(s) | 2757 |
| BstMAI | GTCTC | 5 cut(s) | 121, 2228, 2237, 2268, 2321 |
| BstMCI | CGRYCG | 1 cut(s) | 175 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 145, 1003, 1771, 2397, 2592, 3098 |
| BstNI | CCWGG | 3 cut(s) | 1488, 2925, 3197 |
| BstNSI | RCATGY | 1 cut(s) | 2079 |
| BstSCI | CCNGG | 6 cut(s) | 1486, 2235, 2236, 2505, 2923, 3195 |
| BstSFI | CTRYAG | 2 cut(s) | 137, 2310 |
| BstSLI | GKGCMC | 1 cut(s) | 3029 |
| BstUI | CGCG | 2 cut(s) | 1479, 2898 |
| BstV1I | GCAGC | 2 cut(s) | 1509, 3197 |
| BstV2I | GAAGAC | 4 cut(s) | 102, 1484, 1831, 2567 |
| BstX2I | RGATCY | 4 cut(s) | 361, 1855, 1884, 2653 |
| BstYI | RGATCY | 4 cut(s) | 361, 1855, 1884, 2653 |
| Bsu36I | CCTNAGG | 1 cut(s) | 588 |
| BsuI | GTATCC | 2 cut(s) | 1743, 3193 |
| BsuRI | GGCC | 5 cut(s) | 23, 482, 1765, 2190, 2843 |
| BtgI | CCRYGG | 2 cut(s) | 315, 2896 |
| BtsIMutI | CAGTG | 4 cut(s) | 65, 1021, 2337, 3027 |
| BtuMI | TCGCGA | 1 cut(s) | 1479 |
| Cac8I | GCNNGC | 3 cut(s) | 1776, 2077, 2584 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2336 |
| CfoI | GCGC | 1 cut(s) | 2757 |
| Cfr10I | RCCGGY | 3 cut(s) | 144, 343, 3050 |
| Cfr13I | GGNCC | 4 cut(s) | 21, 1954, 2145, 2900 |
| Cfr42I | CCGCGG | 1 cut(s) | 2899 |
| Cfr9I | CCCGGG | 1 cut(s) | 2236 |
| CpoI | CGGWCCG | 1 cut(s) | 2900 |
| Csp6I | GTAC | 9 cut(s) | 142, 1182, 1411, 1551, 1781, 2241, 2611, 3009, 3304 |
| CspI | CGGWCCG | 1 cut(s) | 2900 |
| CviAII | CATG | 8 cut(s) | 316, 725, 1430, 1452, 2076, 2141, 3006, 3264 |
| CviQI | GTAC | 9 cut(s) | 142, 1182, 1411, 1551, 1781, 2241, 2611, 3009, 3304 |
| DraI | TTTAAA | 2 cut(s) | 1932, 2254 |
| DraIII | CACNNNGTG | 1 cut(s) | 282 |
| EaeI | YGGCCR | 3 cut(s) | 480, 1763, 2841 |
| Eam1104I | CTCTTC | 6 cut(s) | 383, 1590, 1752, 2271, 2874, 3275 |
| EarI | CTCTTC | 6 cut(s) | 383, 1590, 1752, 2271, 2874, 3275 |
| Ecl136II | GAGCTC | 3 cut(s) | 194, 211, 1030 |
| Eco130I | CCWWGG | 1 cut(s) | 315 |
| Eco24I | GRGCYC | 5 cut(s) | 196, 213, 1032, 2393, 3295 |
| Eco47I | GGWCC | 3 cut(s) | 1954, 2145, 2900 |
| Eco53kI | GAGCTC | 3 cut(s) | 194, 211, 1030 |
| Eco57I | CTGAAG | 4 cut(s) | 420, 1805, 2279, 2591 |
| Eco81I | CCTNAGG | 1 cut(s) | 588 |
| Eco88I | CYCGRG | 1 cut(s) | 2236 |
| EcoICRI | GAGCTC | 3 cut(s) | 194, 211, 1030 |
| EcoO109I | RGGNCCY | 1 cut(s) | 21 |
| EcoRI | GAATTC | 3 cut(s) | 336, 1203, 1713 |
| EcoRII | CCWGG | 3 cut(s) | 1486, 2923, 3195 |
| EcoT14I | CCWWGG | 1 cut(s) | 315 |
| EcoT22I | ATGCAT | 2 cut(s) | 417, 1431 |
| EcoT38I | GRGCYC | 5 cut(s) | 196, 213, 1032, 2393, 3295 |
| ErhI | CCWWGG | 1 cut(s) | 315 |
| Esp3I | CGTCTC | 1 cut(s) | 121 |
| FaeI | CATG | 8 cut(s) | 319, 728, 1433, 1455, 2079, 2144, 3009, 3267 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1262, 1294, 1508, 1540 |
| FaqI | GGGAC | 3 cut(s) | 1670, 1832, 2158 |
| FatI | CATG | 8 cut(s) | 315, 724, 1429, 1451, 2075, 2140, 3005, 3263 |
| FauI | CCCGC | 1 cut(s) | 110 |
| FauNDI | CATATG | 2 cut(s) | 1721, 1851 |
| FbaI | TGATCA | 1 cut(s) | 1405 |
| Fnu4HI | GCNGC | 3 cut(s) | 1498, 2844, 3211 |
| FriOI | GRGCYC | 5 cut(s) | 196, 213, 1032, 2393, 3295 |
| Fsp4HI | GCNGC | 3 cut(s) | 1498, 2844, 3211 |
| GlaI | GCGC | 1 cut(s) | 2756 |
| GluI | GCNGC | 3 cut(s) | 1498, 2844, 3211 |
| GsaI | CCCAGC | 1 cut(s) | 2351 |
| GsuI | CTGGAG | 1 cut(s) | 2210 |
| HaeII | RGCGCY | 1 cut(s) | 2758 |
| HaeIII | GGCC | 5 cut(s) | 23, 482, 1765, 2190, 2843 |
| HhaI | GCGC | 1 cut(s) | 2757 |
| Hin1II | CATG | 8 cut(s) | 319, 728, 1433, 1455, 2079, 2144, 3009, 3267 |
| Hin6I | GCGC | 1 cut(s) | 2755 |
| HinP1I | GCGC | 1 cut(s) | 2755 |
| HincII | GTYRAC | 1 cut(s) | 731 |
| HindII | GTYRAC | 1 cut(s) | 731 |
| HindIII | AAGCTT | 4 cut(s) | 1982, 2297, 2381, 2603 |
| HphI | GGTGA | 4 cut(s) | 104, 249, 932, 1318 |
| Hpy166II | GTNNAC | 6 cut(s) | 731, 802, 1896, 1975, 2273, 3137 |
| Hpy8I | GTNNAC | 6 cut(s) | 731, 802, 1896, 1975, 2273, 3137 |
| Hpy99I | CGWCG | 3 cut(s) | 374, 971, 2361 |
| HpyCH4III | ACNGT | 6 cut(s) | 1575, 1943, 1992, 2332, 2980, 3031 |
| HpyCH4IV | ACGT | 5 cut(s) | 372, 958, 2032, 2359, 2767 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 145, 1003, 1771, 2397, 2592, 3098 |
| HpySE526I | ACGT | 5 cut(s) | 372, 958, 2032, 2359, 2767 |
| Hsp92II | CATG | 8 cut(s) | 319, 728, 1433, 1455, 2079, 2144, 3009, 3267 |
| HspAI | GCGC | 1 cut(s) | 2755 |
| Kpn2I | TCCGGA | 2 cut(s) | 205, 2992 |
| Ksp22I | TGATCA | 1 cut(s) | 1405 |
| KspI | CCGCGG | 1 cut(s) | 2899 |
| LguI | GCTCTTC | 2 cut(s) | 383, 3275 |
| LmnI | GCTCC | 5 cut(s) | 191, 208, 589, 1483, 2863 |
| Lsp1109I | GCAGC | 2 cut(s) | 1509, 3197 |
| MaeII | ACGT | 5 cut(s) | 372, 958, 2032, 2359, 2767 |
| MaeIII | GTNAC | 6 cut(s) | 431, 878, 940, 1037, 1191, 1937 |
| MbiI | CCGCTC | 2 cut(s) | 2846, 3128 |
| MfeI | CAATTG | 2 cut(s) | 2172, 2776 |
| MflI | RGATCY | 4 cut(s) | 361, 1855, 1884, 2653 |
| MhlI | GDGCHC | 8 cut(s) | 14, 196, 213, 966, 1032, 2393, 3029, 3295 |
| MlsI | TGGCCA | 1 cut(s) | 482 |
| MluNI | TGGCCA | 1 cut(s) | 482 |
| MlyI | GAGTC | 7 cut(s) | 320, 552, 1199, 1466, 1874, 2239, 2425 |
| MmeI | TCCRAC | 3 cut(s) | 393, 523, 1238 |
| Mox20I | TGGCCA | 1 cut(s) | 482 |
| Mph1103I | ATGCAT | 2 cut(s) | 417, 1431 |
| MroI | TCCGGA | 2 cut(s) | 205, 2992 |
| MroXI | GAANNNNTTC | 4 cut(s) | 781, 1274, 1461, 2821 |
| MscI | TGGCCA | 1 cut(s) | 482 |
| MslI | CAYNNNNRTG | 1 cut(s) | 3016 |
| Msp20I | TGGCCA | 1 cut(s) | 482 |
| MspA1I | CMGCKG | 1 cut(s) | 2898 |
| MspCI | CTTAAG | 1 cut(s) | 2300 |
| MspR9I | CCNGG | 6 cut(s) | 1488, 2237, 2238, 2507, 2925, 3197 |
| MunI | CAATTG | 2 cut(s) | 2172, 2776 |
| Mva1269I | GAATGC | 3 cut(s) | 1289, 1628, 2888 |
| MvaI | CCWGG | 3 cut(s) | 1488, 2925, 3197 |
| MvnI | CGCG | 2 cut(s) | 1479, 2898 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 145, 1003, 1771, 2397, 2592, 3098 |
| NciI | CCSGG | 3 cut(s) | 2237, 2238, 2507 |
| NcoI | CCATGG | 1 cut(s) | 315 |
| NdeI | CATATG | 2 cut(s) | 1721, 1851 |
| NlaIII | CATG | 8 cut(s) | 319, 728, 1433, 1455, 2079, 2144, 3009, 3267 |
| NlaIV | GGNNCC | 4 cut(s) | 363, 811, 1485, 2146 |
| NmuCI | GTSAC | 4 cut(s) | 878, 1037, 1191, 1937 |
| NruI | TCGCGA | 1 cut(s) | 1479 |
| NsiI | ATGCAT | 2 cut(s) | 417, 1431 |
| NspI | RCATGY | 1 cut(s) | 2079 |
| NspV | TTCGAA | 1 cut(s) | 2880 |
| PaeI | GCATGC | 1 cut(s) | 2079 |
| PciSI | GCTCTTC | 2 cut(s) | 383, 3275 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 2275, 2444 |
| PctI | GAATGC | 3 cut(s) | 1289, 1628, 2888 |
| PdmI | GAANNNNTTC | 4 cut(s) | 781, 1274, 1461, 2821 |
| PflFI | GACNNNGTC | 1 cut(s) | 2332 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 2102, 3151 |
| PfoI | TCCNGGA | 3 cut(s) | 2505, 2923, 3195 |
| PkrI | GCNGC | 3 cut(s) | 1499, 2845, 3212 |
| PleI | GAGTC | 7 cut(s) | 319, 552, 1198, 1466, 1873, 2238, 2424 |
| PpsI | GAGTC | 7 cut(s) | 319, 552, 1198, 1466, 1873, 2238, 2424 |
| Ppu21I | YACGTR | 2 cut(s) | 2033, 2768 |
| PshBI | ATTAAT | 1 cut(s) | 3249 |
| PsiI | TTATAA | 1 cut(s) | 513 |
| Psp124BI | GAGCTC | 3 cut(s) | 196, 213, 1032 |
| Psp6I | CCWGG | 3 cut(s) | 1486, 2923, 3195 |
| PspFI | CCCAGC | 1 cut(s) | 2347 |
| PspGI | CCWGG | 3 cut(s) | 1486, 2923, 3195 |
| PspN4I | GGNNCC | 4 cut(s) | 363, 811, 1485, 2146 |
| PspPI | GGNCC | 4 cut(s) | 21, 1954, 2145, 2900 |
| PstI | CTGCAG | 1 cut(s) | 141 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2336 |
| PsuI | RGATCY | 4 cut(s) | 361, 1855, 1884, 2653 |
| PsyI | GACNNNGTC | 1 cut(s) | 2332 |
| RruI | TCGCGA | 1 cut(s) | 1479 |
| RsaI | GTAC | 9 cut(s) | 143, 1183, 1412, 1552, 1782, 2242, 2612, 3010, 3305 |
| RsaNI | GTAC | 9 cut(s) | 142, 1182, 1411, 1551, 1781, 2241, 2611, 3009, 3304 |
| RseI | CAYNNNNRTG | 1 cut(s) | 3016 |
| Rsr2I | CGGWCCG | 1 cut(s) | 2900 |
| RsrII | CGGWCCG | 1 cut(s) | 2900 |
| SacI | GAGCTC | 3 cut(s) | 196, 213, 1032 |
| SacII | CCGCGG | 1 cut(s) | 2899 |
| SapI | GCTCTTC | 2 cut(s) | 383, 3275 |
| SatI | GCNGC | 3 cut(s) | 1498, 2844, 3211 |
| Sau96I | GGNCC | 4 cut(s) | 21, 1954, 2145, 2900 |
| SchI | GAGTC | 7 cut(s) | 320, 552, 1199, 1466, 1874, 2239, 2425 |
| ScrFI | CCNGG | 6 cut(s) | 1488, 2237, 2238, 2507, 2925, 3197 |
| SduI | GDGCHC | 8 cut(s) | 14, 196, 213, 966, 1032, 2393, 3029, 3295 |
| SfcI | CTRYAG | 2 cut(s) | 137, 2310 |
| Sfr303I | CCGCGG | 1 cut(s) | 2899 |
| SfuI | TTCGAA | 1 cut(s) | 2880 |
| SgrBI | CCGCGG | 1 cut(s) | 2899 |
| SinI | GGWCC | 3 cut(s) | 1954, 2145, 2900 |
| SmaI | CCCGGG | 1 cut(s) | 2238 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 3016 |
| SmlI | CTYRAG | 7 cut(s) | 79, 214, 1025, 1708, 1913, 2054, 2300 |
| SmoI | CTYRAG | 7 cut(s) | 79, 214, 1025, 1708, 1913, 2054, 2300 |
| SpeI | ACTAGT | 1 cut(s) | 733 |
| SphI | GCATGC | 1 cut(s) | 2079 |
| SsiI | CCGC | 7 cut(s) | 103, 2148, 2623, 2844, 2896, 2898, 3126 |
| SspI | AATATT | 3 cut(s) | 1340, 2820, 2914 |
| SstI | GAGCTC | 3 cut(s) | 196, 213, 1032 |
| StyD4I | CCNGG | 6 cut(s) | 1486, 2235, 2236, 2505, 2923, 3195 |
| StyI | CCWWGG | 1 cut(s) | 315 |
| TaaI | ACNGT | 6 cut(s) | 1575, 1943, 1992, 2332, 2980, 3031 |
| TaiI | ACGT | 5 cut(s) | 375, 961, 2035, 2362, 2770 |
| TaqII | GACCGA | 1 cut(s) | 189 |
| TatI | WGTACW | 4 cut(s) | 1181, 1780, 2610, 3008 |
| TauI | GCSGC | 1 cut(s) | 2846 |
| TscAI | CASTG | 4 cut(s) | 65, 1021, 2337, 3034 |
| TseFI | GTSAC | 4 cut(s) | 878, 1037, 1191, 1937 |
| TseI | GCWGC | 2 cut(s) | 1497, 3210 |
| Tsp45I | GTSAC | 4 cut(s) | 878, 1037, 1191, 1937 |
| TspDTI | ATGAA | 8 cut(s) | 306, 713, 808, 2129, 2157, 2387, 2814, 2961 |
| TspGWI | ACGGA | 4 cut(s) | 1836, 2267, 2448, 2892 |
| TspMI | CCCGGG | 1 cut(s) | 2236 |
| TspRI | CASTG | 4 cut(s) | 65, 1021, 2337, 3034 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2332 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 2102, 3151 |
| Vha464I | CTTAAG | 1 cut(s) | 2300 |
| VpaK11BI | GGWCC | 3 cut(s) | 1954, 2145, 2900 |
| VspI | ATTAAT | 1 cut(s) | 3249 |
| XbaI | TCTAGA | 1 cut(s) | 901 |
| XceI | RCATGY | 1 cut(s) | 2079 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 57, 283 |
| XmaI | CCCGGG | 1 cut(s) | 2236 |
| XmnI | GAANNNNTTC | 4 cut(s) | 781, 1274, 1461, 2821 |
| Zsp2I | ATGCAT | 2 cut(s) | 417, 1431 |