Rmu_sc0010993.1_g000005

TMV resistance protein N-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0010993.1
OG0000007
Physical Location & Seq
Forward (+)
24151 .. 33736
9586 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0010993.1_g000005.1.cds

Sequence Viewer

Length: 4212 bp
atggcgtcgagctaccacatgagagcctccacgtcttctgcttcagcttcaaaatggaaatacgacgtgtttttgagtttcaggggttcagatacccgcaggaacttcacggaccatttatacgacaaactgcagtgtcgaggaatcacaactttcagggacgacacagagcttgaaagaggtacaactctttcttcggggctcctggctgcaattgaacaatcaaggtttgcagtggttgttctttcgccaaactatgcttcttccacttggtgcttgctagaacttgtcaagattgtttcttgcatgggagacagggggactattctgccagtcttttatgaagtggatccctctgatgtgagacatcagagagggagctttgccgaggcctttgctgaacatgaagacaagttttcaggggaagacgtgaagaaggtgcaagagtggggagatgctttaacaacagtggccaatctctctggatgggattcaaaggattataggattgggaaatctagaaccttctctcctattcctattcctagtttgataaggcacactaaacttgattttccttcaacactcccccttgtgccgctcaaacttggtggtgacgcttcatccgttgcctcgttaaaaaccttgccagggcagcaggggctgcagtgttgctgggctgctggtgccttgcggggctgcagatacaagggcagcagcgaggctagctactgcgggggtgtggcgcaagggttgcaggcgcacgagcgcgctgggtgtgtggcagaagctcaggggcgcgtcgctggtgggctggcaggagcgcaggggctcggattgcagggaagcaggcaggaacttgcggcaggggctgcagggcttgaggcaggtgctgcaaggcgtgcggcaggaagctgcagggcggaaggcagggctgcggggctgcacgggctagggcttgcgatagcttgcagcagattttggtatgaaacagagcttatcaaagagattgtggaagcactatggaagaaagtatatcctacatttgcatcatcagagtcctcagagaatttggtcggaattgattccaagctgatcgaaatagattttcttttagaaaaaaaagcaaagggtgtctgctttctaggaatatggggtatgtgtgggattgggaagacaacccttgctagacttgtttatcacagaatctctcatcattttgaaattagcatttttcttcctgatgtcagagaggtttctacaacacacggtctagttaatctacaacaaaatctgctttgccagatattgaaggaaaaaaacattcaagtatgggatgttgatgatggaatgaccaagataaagagctgtttttataataaaaaggttctactagttcttgatgatgtggatcaattagaccaactggaaaacttggccggagaagaagactggtttggttcaggaagcatagttatcgttacaacaagagatcaacgtttactagtcttgcatggtatagaaacacaatataaaagcaagggattaaatgagtatgaagctcttcagctctttagttggaaagcctttaagaaagattatcctgaagaaggttatagggaactgactaagggtatcttggattatgctagaggccttccattagctctaaagattctgggatcttttctctataagagagaccgaggtgattgggaaagtacagtagccaagctaaagaaagctcctattgatcaagcactgtttaaggcactcagaataagttatgatggattagatatgatgagccaacaagtttttctcgatgttgcatgtttcctcaaggggaatgacaaagaacgagtaattcaaatactagatagcttttttggctttgacactagtatcatggtaagtgttctcattgagaaatccctgttaactatttttgacaactgtgtggatatgcatgatctgatacaagaaatgggaagggaaattgtccgtttggagtctgagcaagagcctggccaacgcagtcagttgtggcttcgggacgacatttttcatgtactcaaagagaatacgggaacagaagcaattagaagcatagccatatgcttgcctaaggtggaagagttcgcttggaatccaaaagccttctctaagatgtctaaactgaagtttctcaaaatgcaaaatttggttctatgtcaaggccctgaatatcttcctgatgccataagggttcttgaatgggcttggtatccatcaaaatctcttccaccaaattttcagccggtggaacttattgagattattctgcatcatagcaaaattgaggagctttggcatggaataaagtacttggagaagttgacagttatggatcttagctactccgagaacttgacaacgaccccagatttcacaggtatgccaaaccttgagaggctggttcttgaaggttgtacaaatttagttgacattcatccatcaatcatatctctcagaagacttaaagttttaaattttaagaactgccaaagtattcagagaattccaggtggattagaaatggattctcttgaactaattgatctttctggctgctcaaaagtggatatacttccacaatttgtcagacggatccaaaagttatcagaactttttttaagaggaattggcatgctaaagtttgaactatcatttcattcagtcagtcctcaccggctgagtctcgtattggtttctttcaaacatttctgttctctgaagggattacatctcaatgactgcaaacttggtgaaggagatattcccgatgatattggttgtttgtcctccttagaaaacttggatcttagtgtcaacaattttgtcagccttcctgccagccttagttggctttctaagttgaagtatttgaacttggatgattgcaaaaggctccaacaattgccagaccttccattatttagcggcacatgtcatgtcaccgcggacaactgtatatccttaaaaaagtttccagatccaccagacttgtgcaaattatggaaactatcctttaactttattaactgctgtagcctcgaagatggaggaagttgttatataatacgttcacttctacagcggttccttcaggaaccccctccttgttttgagatgttcagtataatcattcctggaaatgatattccttgctggttcaaacatcgagttgtgggagatacggtactggactgttcttcacctactagtaagtggatcggatttgctctatgtgttctttttggagctgaagaaaacccaggtgtccctggtgaagatcatgatttagaacctcatgcaaaagcaatttcgtgttgttggaagcccggtgtttttgtacccagtctcagttttgatctaaaccaagttcttaagtcggatcacatttgtttattccttttgccttcaaaacattatcttgaaaacattggttttcttttggaaaacattggttttcttttggaaaccacgtgtgctaagaaaagcaacgcatgcttgaaggtgaaggggtgcggggttcgtgctctgtacaagcaagacctgaaagaactcgaagaactcaacttaagaatgaatcgatacaatagagtttctgagaggaatttgggttgtatgatgaacaacccccctctttttactgaggagttcagtttcgtattctctggaaatgacattcctgagtggttcgaaactagtgcgaagcgcaacagggtgaacatagaccgaccttgtatttcatgtagtagtacgtggatggggtttgctttgtgtgttctctttggagctgaagaaaatccgggtgccctttgtgaagatcgtgatttagaacctcatgtacacaaaatttcatgtcgttggatgctctcctatggctccattgttttgaaactagaacaagttgttcagttatcagatcacctctgtgtatttttcgttcctggggataaatgtctgcttacatggagatggtttacgtttgaattcagaaccaggtgtgctaacaggaacgcatgcctgaaggtgaaagggtgcgggatccgtagtttgtacatgcaggacttgaaagagcccaacataagagagaaccaatacaacgtgtctaagagggatggggttgcagattggatcgaacaactgagatcgtcaataaactga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04014 map04014
Pfam Domains
Protein Families
LRR_3 NB-ARC TIR

Protein Analysis

1403

Amino Acids

157.73

Weight (kDa)

6.27

Isoelectric Point (pI)

40.89

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000007)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G17680 AT5G17680
fragaria_vesca FvH4_1g04740 FvH4_1g04740 FvH4_1g04740 FvH4_1g07010 FvH4_1g07020 FvH4_1g11570 FvH4_1g11570 FvH4_1g11570 FvH4_1g11570 FvH4_1g11570 FvH4_1g11570 FvH4_1g11570 FvH4_1g11570 FvH4_1g11570 FvH4_1g11570 FvH4_1g11580 FvH4_1g17862 FvH4_1g22370 FvH4_1g22372 FvH4_1g22377 FvH4_1g22512 FvH4_2g00540 FvH4_2g00541 FvH4_2g00550 FvH4_2g00950 FvH4_2g14320 FvH4_2g14320 FvH4_2g14321 FvH4_3g33030 FvH4_3g33030 FvH4_3g33030 FvH4_3g35620 FvH4_3g35630 FvH4_3g36130 FvH4_3g36131 FvH4_3g36140 FvH4_5g02251 FvH4_6g04060 FvH4_6g04250 FvH4_6g04250 FvH4_6g04250 FvH4_6g04350 FvH4_6g04730 FvH4_6g04730 FvH4_6g05490 FvH4_6g05610 FvH4_6g05610 FvH4_7g12160 FvH4_7g12160 FvH4_7g12160 FvH4_7g21060 FvH4_7g21060 FvH4_7g21060 FvH4_7g21070 FvH4_7g21140 FvH4_7g21140 FvH4_7g21140 FvH4_7g21140 FvH4_7g21140 FvH4_7g21140 FvH4_7g21150 FvH4_7g21170 FvH4_7g21170 FvH4_7g21171 FvH4_7g21172 FvH4_7g21180 FvH4_7g21201 FvH4_7g21201 FvH4_7g21230 FvH4_7g21230 FvH4_7g21230 FvH4_7g28631 FvH4_7g32440 FvH4_7g32460 FvH4_7g32464 FvH4_7g32470 FvH4_7g32480 FvH4_7g32710 FvH4_7g32720 FvH4_7g32740 FvH4_7g32740 FvH4_7g32740 FvH4_7g32760 FvH4_7g33140
malus_domestica MD00G1125900.v1.1 MD00G1126000.v1.1 MD00G1126100.v1.1 MD04G1054900.v1.1 MD05G1007000.v1.1 MD05G1018900.v1.1 MD05G1019700.v1.1 MD05G1020000.v1.1 MD05G1020100.v1.1 MD05G1022400.v1.1 MD05G1022500.v1.1 MD05G1022600.v1.1 MD05G1022800.v1.1 MD05G1028700.v1.1 MD05G1100200.v1.1 MD08G1021900.v1.1 MD10G1006500.v1.1 MD10G1006900.v1.1 MD10G1007200.v1.1 MD10G1007600.v1.1 MD10G1015300.v1.1 MD10G1018400.v1.1 MD10G1018500.v1.1 MD10G1018900.v1.1 MD10G1019200.v1.1 MD10G1019700.v1.1 MD10G1020000.v1.1 MD10G1020100.v1.1 MD10G1020900.v1.1 MD10G1021000.v1.1 MD10G1034300.v1.1 MD10G1034400.v1.1 MD10G1034700.v1.1 MD10G1034800.v1.1 MD10G1035000.v1.1 MD10G1035400.v1.1 MD10G1232400.v1.1 MD15G1377300.v1.1 MD15G1377400.v1.1
prunus_persica Prupe.1G165300_v2.0.a1 Prupe.1G165300_v2.0.a1 Prupe.1G523900_v2.0.a1 Prupe.1G524000_v2.0.a1 Prupe.1G526300_v2.0.a1 Prupe.2G059000_v2.0.a1 Prupe.2G059000_v2.0.a1 Prupe.2G059000_v2.0.a1 Prupe.2G059000_v2.0.a1 Prupe.3G169500_v2.0.a1 Prupe.6G109800_v2.0.a1 Prupe.7G026100_v2.0.a1 Prupe.7G037000_v2.0.a1 Prupe.7G037000_v2.0.a1 Prupe.7G037600_v2.0.a1 Prupe.8G005100_v2.0.a1 Prupe.8G005300_v2.0.a1 Prupe.8G021700_v2.0.a1 Prupe.8G022800_v2.0.a1 Prupe.8G023100_v2.0.a1 Prupe.8G023200_v2.0.a1 Prupe.8G023200_v2.0.a1 Prupe.8G023300_v2.0.a1 Prupe.8G023500_v2.0.a1 Prupe.8G023600_v2.0.a1 Prupe.8G023700_v2.0.a1 Prupe.8G023700_v2.0.a1 Prupe.8G023700_v2.0.a1 Prupe.8G023800_v2.0.a1 Prupe.8G023800_v2.0.a1 Prupe.8G023800_v2.0.a1 Prupe.8G023900_v2.0.a1 Prupe.8G026500_v2.0.a1 Prupe.8G026500_v2.0.a1 Prupe.8G026700_v2.0.a1 Prupe.8G026700_v2.0.a1 Prupe.8G026800_v2.0.a1 Prupe.8G026800_v2.0.a1 Prupe.8G026800_v2.0.a1 Prupe.8G026800_v2.0.a1 Prupe.8G027000_v2.0.a1 Prupe.8G027100_v2.0.a1 Prupe.8G027300_v2.0.a1 Prupe.8G027300_v2.0.a1 Prupe.8G027300_v2.0.a1 Prupe.8G032000_v2.0.a1 Prupe.8G034700_v2.0.a1 Prupe.8G046500_v2.0.a1 Prupe.8G046700_v2.0.a1 Prupe.8G056700_v2.0.a1 Prupe.8G056700_v2.0.a1 Prupe.8G056700_v2.0.a1
pyrus_communis pycom05g01130 pycom05g01150 pycom05g01160 pycom05g01330 pycom05g01340 pycom05g01350 pycom05g01360 pycom05g01390 pycom05g01400 pycom05g01420 pycom05g01430 pycom10g00470 pycom10g00970 pycom10g00980 pycom10g00990 pycom10g01000 pycom10g01340 pycom10g01350 pycom10g01360 pycom10g01390 pycom10g01400 pycom10g01410 pycom10g01420 pycom10g01430 pycom10g02280 pycom10g02300 pycom10g02310 pycom10g02330 pycom10g02340 pycom10g02370 pycom10g02390 pycom10g02400 pycom12g00770 pycom15g33690 pycom15g33720 pycom15g33740 pycom15g33750 pycom15g33800
rosa_chinensis RchiOBHm_Chr1g0340831 RchiOBHm_Chr1g0365481 RchiOBHm_Chr1g0365531 RchiOBHm_Chr1g0365541 RchiOBHm_Chr1g0365551 RchiOBHm_Chr1g0365561 RchiOBHm_Chr1g0365641 RchiOBHm_Chr1g0382021 RchiOBHm_Chr1g0382041 RchiOBHm_Chr1g0382221 RchiOBHm_Chr1g0382261 RchiOBHm_Chr1g0382271 RchiOBHm_Chr1g0382281 RchiOBHm_Chr1g0382321 RchiOBHm_Chr3g0465111 RchiOBHm_Chr3g0481881 RchiOBHm_Chr3g0481891 RchiOBHm_Chr3g0481981 RchiOBHm_Chr3g0482041 RchiOBHm_Chr5g0055581 RchiOBHm_Chr5g0060381 RchiOBHm_Chr5g0061111 RchiOBHm_Chr5g0063811 RchiOBHm_Chr5g0064561 RchiOBHm_Chr5g0064571 RchiOBHm_Chr5g0064661 RchiOBHm_Chr5g0064701 RchiOBHm_Chr5g0064731 RchiOBHm_Chr5g0064871 RchiOBHm_Chr6g0245321 RchiOBHm_Chr6g0245331 RchiOBHm_Chr6g0245341 RchiOBHm_Chr6g0245481 RchiOBHm_Chr6g0245501 RchiOBHm_Chr6g0245551 RchiOBHm_Chr6g0246391 RchiOBHm_Chr6g0246501 RchiOBHm_Chr6g0246541 RchiOBHm_Chr6g0246601 RchiOBHm_Chr6g0246671 RchiOBHm_Chr6g0246721 RchiOBHm_Chr6g0246751 RchiOBHm_Chr6g0246861 RchiOBHm_Chr6g0246881 RchiOBHm_Chr6g0246891 RchiOBHm_Chr6g0249221 RchiOBHm_Chr6g0249691 RchiOBHm_Chr6g0249721 RchiOBHm_Chr6g0249731 RchiOBHm_Chr6g0249751 RchiOBHm_Chr6g0249841 RchiOBHm_Chr6g0249881 RchiOBHm_Chr6g0249921 RchiOBHm_Chr6g0249931 RchiOBHm_Chr6g0249951 RchiOBHm_Chr6g0250011 RchiOBHm_Chr6g0250021 RchiOBHm_Chr6g0250081 RchiOBHm_Chr6g0250091 RchiOBHm_Chr6g0250131 RchiOBHm_Chr6g0250161 RchiOBHm_Chr6g0250201 RchiOBHm_Chr6g0250241 RchiOBHm_Chr6g0250291 RchiOBHm_Chr6g0250301 RchiOBHm_Chr6g0250371 RchiOBHm_Chr6g0250771 RchiOBHm_Chr6g0250981 RchiOBHm_Chr6g0251301 RchiOBHm_Chr6g0251321 RchiOBHm_Chr6g0251341 RchiOBHm_Chr6g0251441 RchiOBHm_Chr6g0251471 RchiOBHm_Chr6g0272741 RchiOBHm_Chr6g0276581 RchiOBHm_Chr6g0276591 RchiOBHm_Chr6g0276631 RchiOBHm_Chr6g0284581 RchiOBHm_Chr6g0284641 RchiOBHm_Chr6g0285091 RchiOBHm_Chr7g0217981
rosa_laevigata RLG00000002427 RLG00000003507 RLG00000008496 RLG00000012678 RLG00000012735 RLG00000012736 RLG00000013083 RLG00000013084 RLG00000013384 RLG00000013386 RLG00000013660 RLG00000015037 RLG00000015242 RLG00000015253 RLG00000015255 RLG00000015256 RLG00000015259 RLG00000015307 RLG00000015465 RLG00000015466 RLG00000015504 RLG00000015506 RLG00000015507 RLG00000015510 RLG00000015513 RLG00000015544 RLG00000015545 RLG00000015549 RLG00000015550 RLG00000015552 RLG00000016855 RLG00000016858 RLG00000016859 RLG00000018281 RLG00000018283 RLG00000022622 RLG00000023379 RLG00000023937 RLG00000024655 RLG00000026187 RLG00000026189 RLG00000026190 RLG00000026191 RLG00000026192 RLG00000027420 RLG00000027421 RLG00000027661 RLG00000028903 RLG00000028904 RLG00000030248 RLG00000035359 RLG00000035360 RLG00000035361 RLG00000035429 RLG00000035456 RLG00000035679 RLG00000035680 RLG00000035681 RLG00000035735 RLG00000035738 RLG00000035844 RLG00000036364
rosa_multiflora Rmu_co8335069.1_g000001 Rmu_co8396115.1_g000001 Rmu_co8448557.1_g000001 Rmu_co8510855.1_g000001 Rmu_sc0000110.1_g000004 Rmu_sc0000110.1_g000007 Rmu_sc0000110.1_g000018 Rmu_sc0000110.1_g000019 Rmu_sc0000110.1_g000022 Rmu_sc0000110.1_g000023 Rmu_sc0000110.1_g000033 Rmu_sc0000110.1_g000037 Rmu_sc0000110.1_g000039 Rmu_sc0000276.1_g000031 Rmu_sc0000276.1_g000034 Rmu_sc0000411.1_g000006 Rmu_sc0000411.1_g000007 Rmu_sc0000452.1_g000027 Rmu_sc0000471.1_g000009 Rmu_sc0000507.1_g000020 Rmu_sc0000694.1_g000018 Rmu_sc0000701.1_g000002 Rmu_sc0000701.1_g000009 Rmu_sc0000701.1_g000010 Rmu_sc0000704.1_g000001 Rmu_sc0000704.1_g000042 Rmu_sc0000704.1_g000043 Rmu_sc0000969.1_g000002 Rmu_sc0001001.1_g000003 Rmu_sc0001066.1_g000004 Rmu_sc0001066.1_g000019 Rmu_sc0001209.1_g000023 Rmu_sc0001209.1_g000040 Rmu_sc0001209.1_g000043 Rmu_sc0001237.1_g000018 Rmu_sc0001246.1_g000016 Rmu_sc0001293.1_g000008 Rmu_sc0001293.1_g000011 Rmu_sc0001293.1_g000022 Rmu_sc0001293.1_g000023 Rmu_sc0001373.1_g000014 Rmu_sc0001382.1_g000001 Rmu_sc0001738.1_g000024 Rmu_sc0002025.1_g000009 Rmu_sc0002025.1_g000012 Rmu_sc0002025.1_g000013 Rmu_sc0002093.1_g000004 Rmu_sc0002202.1_g000008 Rmu_sc0002202.1_g000010 Rmu_sc0002202.1_g000011 Rmu_sc0002202.1_g000018 Rmu_sc0002406.1_g000014 Rmu_sc0002478.1_g000003 Rmu_sc0002535.1_g000042 Rmu_sc0002587.1_g000021 Rmu_sc0002587.1_g000023 Rmu_sc0002587.1_g000028 Rmu_sc0002587.1_g000039 Rmu_sc0002587.1_g000044 Rmu_sc0002587.1_g000048 Rmu_sc0002587.1_g000049 Rmu_sc0002793.1_g000005 Rmu_sc0003060.1_g000003 Rmu_sc0003060.1_g000004 Rmu_sc0003060.1_g000005 Rmu_sc0003131.1_g000001 Rmu_sc0003131.1_g000032 Rmu_sc0003255.1_g000009 Rmu_sc0003255.1_g000017 Rmu_sc0003270.1_g000028 Rmu_sc0003293.1_g000004 Rmu_sc0003293.1_g000008 Rmu_sc0003293.1_g000010 Rmu_sc0003352.1_g000009 Rmu_sc0003352.1_g000012 Rmu_sc0003386.1_g000012 Rmu_sc0003387.1_g000003 Rmu_sc0003387.1_g000007 Rmu_sc0003665.1_g000002 Rmu_sc0003811.1_g000001 Rmu_sc0004049.1_g000001 Rmu_sc0004191.1_g000039 Rmu_sc0004691.1_g000008 Rmu_sc0005257.1_g000014 Rmu_sc0005257.1_g000020 Rmu_sc0005685.1_g000005 Rmu_sc0006032.1_g000010 Rmu_sc0006638.1_g000016 Rmu_sc0006878.1_g000005 Rmu_sc0007049.1_g000005 Rmu_sc0007049.1_g000011 Rmu_sc0007049.1_g000012 Rmu_sc0007049.1_g000013 Rmu_sc0007049.1_g000014 Rmu_sc0007383.1_g000001 Rmu_sc0007383.1_g000005 Rmu_sc0007383.1_g000012 Rmu_sc0007558.1_g000003 Rmu_sc0007558.1_g000005 Rmu_sc0007722.1_g000001 Rmu_sc0008209.1_g000002 Rmu_sc0008209.1_g000008 Rmu_sc0008242.1_g000013 Rmu_sc0008965.1_g000001 Rmu_sc0009002.1_g000002 Rmu_sc0009002.1_g000006 Rmu_sc0009002.1_g000007 Rmu_sc0009002.1_g000010 Rmu_sc0009002.1_g000011 Rmu_sc0009227.1_g000011 Rmu_sc0009369.1_g000008 Rmu_sc0009380.1_g000013 Rmu_sc0009451.1_g000011 Rmu_sc0009952.1_g000008 Rmu_sc0009991.1_g000004 Rmu_sc0010993.1_g000005 Rmu_sc0010993.1_g000006 Rmu_sc0012343.1_g000012 Rmu_sc0014236.1_g000002 Rmu_sc0014912.1_g000002 Rmu_sc0014912.1_g000003 Rmu_sc0019669.1_g000001 Rmu_sc0020903.1_g000007 Rmu_sc0021230.1_g000001 Rmu_sc0022147.1_g000001 Rmu_sc0028629.1_g000002 Rmu_sc0031029.1_g000001 Rmu_sc0038922.1_g000001 Rmu_sc0039683.1_g000001 Rmu_sc0039712.1_g000001 Rmu_sc0043027.1_g000001 Rmu_ssc0000009.1_g000002 Rmu_ssc0000009.1_g000004 Rmu_ssc0000309.1_g000010
rosa_roxburghii Rroxscaffold_1G00014850 Rroxscaffold_1G00016420 Rroxscaffold_1G00016430 Rroxscaffold_1G00016970 Rroxscaffold_1G00016980 Rroxscaffold_1G00017020 Rroxscaffold_2G00103000 Rroxscaffold_2G00103010 Rroxscaffold_2G00121260 Rroxscaffold_2G00127090 Rroxscaffold_2G00127120 Rroxscaffold_2G00143350 Rroxscaffold_2G00143360 Rroxscaffold_3G00218090 Rroxscaffold_3G00232940 Rroxscaffold_3G00241540 Rroxscaffold_3G00241550 Rroxscaffold_4G00278190 Rroxscaffold_4G00278220 Rroxscaffold_4G00278240 Rroxscaffold_4G00278260 Rroxscaffold_4G00291120 Rroxscaffold_4G00291140 Rroxscaffold_4G00291150 Rroxscaffold_4G00291160 Rroxscaffold_4G00291180 Rroxscaffold_4G00291220 Rroxscaffold_4G00294350 Rroxscaffold_4G00304090 Rroxscaffold_4G00309820 Rroxscaffold_4G00314470 Rroxscaffold_6G00392280 Rroxscaffold_6G00399770 Rroxscaffold_6G00399780 Rroxscaffold_6G00399800 Rroxscaffold_6G00400110 Rroxscaffold_6G00400130 Rroxscaffold_6G00415240 Rroxscaffold_7G00183750 Rroxscaffold_7G00184040 Rroxscaffold_7G00184570 Rroxscaffold_7G00184580 Rroxscaffold_7G00192150 Rroxscaffold_7G00192460 Rroxscaffold_7G00196030 Rroxscaffold_7G00211080 Rroxscaffold_7G00214480 Rroxscaffold_7G00214490 Rroxscaffold_7G00214570 Rroxscaffold_7G00214580 Rroxscaffold_7G00214590 Rroxscaffold_7G00214610 Rroxscaffold_7G00214620 Rroxscaffold_7G00214790 Rroxscaffold_7G00216630 Rroxscaffold_7G00216640 Rroxscaffold_7G00216670 Rroxscaffold_7G00216680 Rroxscaffold_7G00216690 Rroxscaffold_7G00216730 Rroxscaffold_7G00216770 Rroxscaffold_7G00216780 Rroxscaffold_7G00216820 Rroxscaffold_7G00216830 Rroxscaffold_7G00217280 Rroxscaffold_7G00217310 Rroxscaffold_7G00217320 Rroxscaffold_7G00217330
rosa_rugosa Rorug01G0040400 Rorug01G0173300 Rorug01G0173400 Rorug01G0296100 Rorug01G0296200 Rorug01G0296300 Rorug01G0296400 Rorug01G0322300 Rorug01G0432900 Rorug01G0433100 Rorug01G0433200 Rorug01G0433500 Rorug02G0054900 Rorug02G0077900 Rorug02G0078000 Rorug02G0078100 Rorug02G0207300 Rorug02G0242200 Rorug02G0242300 Rorug03G0075500 Rorug03G0075500 Rorug03G0194300 Rorug05G0329100 Rorug05G0329300 Rorug05G0360000 Rorug05G0360000 Rorug05G0360300 Rorug05G0360400.1 Rorug05G0360500 Rorug05G0364200 Rorug05G0366200 Rorug05G0366300 Rorug05G0366400 Rorug05G0366600 Rorug05G0376400 Rorug05G0376500 Rorug05G0421100 Rorug05G0494600 Rorug05G0494800 Rorug05G0494900 Rorug05G0495100 Rorug05G0495200 Rorug05G0495900 Rorug05G0498200 Rorug05G0498200 Rorug05G0498300.1 Rorug05G0499100 Rorug05G0501700 Rorug05G0501800 Rorug05G0501900 Rorug05G0513800 Rorug05G0514100 Rorug05G0514200 Rorug05G0514200 Rorug05G0514500 Rorug05G0519200 Rorug05G0519300.1 Rorug05G0519400 Rorug05G0519400 Rorug05G0520600 Rorug05G0520700 Rorug05G0520800 Rorug05G0521300 Rorug05G0521400 Rorug05G0521500 Rorug05G0550800 Rorug06G0070400 Rorug06G0070500 Rorug06G0070600 Rorug06G0099500 Rorug06G0099600 Rorug06G0102100 Rorug06G0102200 Rorug06G0102300 Rorug06G0102300 Rorug06G0102400 Rorug06G0162500 Rorug06G0164500 Rorug06G0164600 Rorug06G0164800 Rorug06G0170600 Rorug07G0172900 Rorug07G0172900 Rorug07G0172900 Rorug07G0173000
rosa_samantha Rh1BG156400 Rh1BG156500 Rh1BG156600 Rh1BG292400 Rh1BG413500 Rh1BG413800 Rh1BG414100 Rh1BG414200 Rh1BG414400 Rh1CG059400 Rh1CG309000 Rh1CG428300 Rh1CG428400 Rh2BG129800 Rh2BG273700 Rh2CG131000 Rh2DG131300 Rh3AG245200 Rh3AG245600 Rh3BG139100 Rh3BG280400 Rh3BG280500 Rh3CG141200 Rh3CG149500 Rh3CG275400 Rh3CG275800 Rh3CG276500 Rh3CG276800 Rh3DG140400 Rh3DG272100 Rh3DG272300 Rh3DG272400 Rh3DG272700 Rh3DG272800 Rh3DG272900 Rh5AG099100 Rh5AG424200 Rh5AG435200 Rh5BG411900 Rh5BG439500 Rh5CG108000 Rh5CG436900 Rh5CG457800 Rh5CG462200 Rh5CG462300 Rh6AG033600 Rh6AG186700 Rh6BG190100 Rh6BG215300 Rh6BG217600 Rh6BG217800 Rh6CG188800 Rh6CG284800 Rh6DG003400 Rh6DG008400 Rh6DG008700 Rh6DG008800 Rh6DG009100 Rh6DG009400 Rh6DG025100 Rh6DG180300 Rh6DG209700 Rh6DG210100 Rh6DG272100 Rh6DG272300 Rh6DG273000 Rh7BG305400
rosa_wichuraiana Rw0G010970 Rw0G011460 Rw0G017090 Rw0G023140 Rw1G007890 Rw1G010200 Rw1G015630 Rw1G015640 Rw1G029350 Rw1G029370 Rw1G029380 Rw1G029390 Rw1G029400 Rw1G041290 Rw1G041560 Rw2G009760 Rw2G009770 Rw2G020640 Rw2G021670 Rw2G021690 Rw2G024060 Rw3G011380 Rw3G021890 Rw3G021910 Rw3G021940 Rw3G021950 Rw3G021960 Rw5G037070 Rw5G037080 Rw5G037090 Rw5G039330 Rw5G039890 Rw5G039900 Rw5G039920 Rw5G040740 Rw6G000500 Rw6G000510 Rw6G000520 Rw6G000550 Rw6G000570 Rw6G000580 Rw6G000610 Rw6G000820 Rw6G001070 Rw6G001090 Rw6G001100 Rw6G001170 Rw6G001180 Rw6G001260 Rw6G001270 Rw6G001280 Rw6G001300 Rw6G002450 Rw6G002470 Rw6G002500 Rw6G002830 Rw6G002870 Rw6G003000 Rw6G003080 Rw6G016110 Rw6G018400 Rw6G018590 Rw6G018610 Rw6G023840 Rw6G023880 Rw6G024250 Rw6G024260 Rw7G026620

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1377
AarI CACCTGC 1 cut(s) 878
Acc36I ACCTGC 1 cut(s) 878
AccB1I GGYRCC 2 cut(s) 686, 3857
AccBSI CCGCTC 1 cut(s) 601
AccII CGCG 3 cut(s) 771, 801, 3002
AclI AACGTT 1 cut(s) 1498
AcoI YGGCCR 3 cut(s) 471, 1437, 2029
AcsI RAATTY 9 cut(s) 1069, 2200, 2290, 2476, 2530, 2559, 3658, 3900, 4037
AcuI CTGAAG 9 cut(s) 27, 1550, 1626, 2201, 2795, 3131, 3327, 3864, 4094
AcvI CACGTG 1 cut(s) 3528
AcyI GRCGYC 1 cut(s) 5
AdeI CACNNNGTG 1 cut(s) 273
AfiI CCNNNNNNNGG 2 cut(s) 651, 1610
AflII CTTAAG 2 cut(s) 3428, 3622
AflIII ACRYGT 4 cut(s) 66, 2987, 3527, 4152
AhlI ACTAGT 5 cut(s) 1393, 1504, 1901, 3263, 3749
AjiI CACGTC 3 cut(s) 33, 67, 430
AjnI CCWGG 9 cut(s) 204, 649, 2026, 2563, 3190, 3316, 3325, 3994, 4046
AjuI GAANNNNNNNTTGG 6 cut(s) 244, 276, 1440, 1472, 1803, 1835
AleI CACNNNNGTG 1 cut(s) 3978
AloI GAACNNNNNNTCC 2 cut(s) 514, 546
Alw21I GWGCWC 1 cut(s) 3583
Alw26I GTCTC 5 cut(s) 306, 358, 1695, 2744, 3407
AlwNI CAGNNNCTG 3 cut(s) 664, 872, 893
AoxI GGCC 6 cut(s) 390, 471, 1437, 1654, 2029, 2218
ApoI RAATTY 9 cut(s) 1069, 2200, 2290, 2476, 2530, 2559, 3658, 3900, 4037
Asp700I GAANNNNTTC 3 cut(s) 1084, 1563, 2229
AspLEI GCGC 7 cut(s) 748, 763, 771, 773, 801, 826, 3762
AspS9I GGNCC 2 cut(s) 112, 2219
AsuC2I CCSGG 2 cut(s) 3384, 3855
AsuII TTCGAA 1 cut(s) 3744
AsuNHI GCTAGC 1 cut(s) 725
AvaII GGWCC 1 cut(s) 112
AxyI CCTNAGG 1 cut(s) 2127
BaeGI GKGCMC 1 cut(s) 3862
BaeI ACNNNNGTAYC 2 cut(s) 1888, 1921
BalI TGGCCA 2 cut(s) 473, 2031
BamHI GGATCC 3 cut(s) 349, 2649, 4092
BanI GGYRCC 2 cut(s) 686, 3857
BanII GRGCYC 3 cut(s) 204, 834, 4128
BauI CACGAG 1 cut(s) 764
BbrPI CACGTG 1 cut(s) 3528
BbsI GAAGAC 6 cut(s) 27, 414, 432, 1181, 1455, 2521
Bbv12I GWGCWC 1 cut(s) 3583
BccI CCATC 9 cut(s) 480, 1340, 1784, 2278, 2503, 3095, 3805, 4017, 4160
BcgI CGANNNNNNTGC 6 cut(s) 377, 411, 1459, 1493, 3734, 3768
BciT130I CCWGG 9 cut(s) 206, 651, 2028, 2565, 3192, 3318, 3327, 3996, 4048
BciVI GTATCC 1 cut(s) 2277
BclI TGATCA 1 cut(s) 1753
BcnI CCSGG 2 cut(s) 3384, 3855
BcoDI GTCTC 5 cut(s) 306, 358, 1695, 2744, 3407
BcuI ACTAGT 5 cut(s) 1393, 1504, 1901, 3263, 3749
BfmI CTRYAG 7 cut(s) 131, 665, 700, 873, 916, 3088, 3134
BfrI CTTAAG 2 cut(s) 3428, 3622
BfuAI ACCTGC 1 cut(s) 878
BfuI GTATCC 1 cut(s) 2277
BmcAI AGTACT 1 cut(s) 2366
Bme18I GGWCC 1 cut(s) 112
BmgBI CACGTC 3 cut(s) 33, 67, 430
BmgT120I GGNCC 2 cut(s) 112, 2219
BmrI ACTGGG 1 cut(s) 3393
BmsI GCATC 5 cut(s) 445, 1058, 2227, 2335, 3906
BmtI GCTAGC 1 cut(s) 729
BmuI ACTGGG 1 cut(s) 3393
BpiI GAAGAC 6 cut(s) 27, 414, 432, 1181, 1455, 2521
Bpu10I CCTNAGC 1 cut(s) 792
Bpu14I TTCGAA 1 cut(s) 3744
BpuEI CTTGAG 3 cut(s) 902, 1826, 2468
BpuMI CCSGG 2 cut(s) 3384, 3855
Bsa29I ATCGAT 1 cut(s) 3634
BsaAI YACGTR 2 cut(s) 3528, 3807
BsaBI GATNNNNATC 1 cut(s) 1410
BsaHI GRCGYC 1 cut(s) 5
BsaI GGTCTC 1 cut(s) 1695
BsaJI CCNNGG 7 cut(s) 387, 650, 1705, 3000, 3316, 3325, 3995
BsaXI ACNNNNNCTCC 4 cut(s) 514, 544, 3225, 3255
Bsc4I CCNNNNNNNGG 2 cut(s) 651, 1610
Bse118I RCCGGY 2 cut(s) 2299, 2730
Bse1I ACTGG 5 cut(s) 332, 1431, 1457, 3249, 3399
Bse21I CCTNAGG 1 cut(s) 2127
Bse8I GATNNNNATC 1 cut(s) 1410
BseBI CCWGG 9 cut(s) 206, 651, 2028, 2565, 3192, 3318, 3327, 3996, 4048
BseCI ATCGAT 1 cut(s) 3634
BseDI CCNNGG 7 cut(s) 387, 650, 1705, 3000, 3316, 3325, 3995
BseGI GGATG 8 cut(s) 491, 623, 1342, 2491, 2941, 3816, 3921, 4171
BseJI GATNNNNATC 1 cut(s) 1410
BseLI CCNNNNNNNGG 2 cut(s) 651, 1610
BseNI ACTGG 5 cut(s) 332, 1431, 1457, 3249, 3399
BsePI GCGCGC 1 cut(s) 769
BseRI GAGGAG 2 cut(s) 2357, 3713
BseSI GKGCMC 1 cut(s) 3862
BseYI CCCAGC 2 cut(s) 675, 773
BsgI GTGCAG 1 cut(s) 929
Bsh1236I CGCG 3 cut(s) 771, 801, 3002
BshFI GGCC 6 cut(s) 392, 473, 1439, 1656, 2031, 2220
BshNI GGYRCC 2 cut(s) 686, 3857
BshVI ATCGAT 1 cut(s) 3634
BsiHKAI GWGCWC 1 cut(s) 3583
BsiSI CCGG 5 cut(s) 1440, 2300, 2731, 3384, 3854
BslFI GGGAC 4 cut(s) 173, 334, 2069, 3308
BslI CCNNNNNNNGG 2 cut(s) 651, 1610
BsmAI GTCTC 5 cut(s) 306, 358, 1695, 2744, 3407
BsmFI GGGAC 4 cut(s) 173, 334, 2069, 3308
BsnI GGCC 6 cut(s) 392, 473, 1439, 1656, 2031, 2220
Bso31I GGTCTC 1 cut(s) 1695
Bsp119I TTCGAA 1 cut(s) 3744
Bsp1286I GDGCHC 5 cut(s) 204, 834, 3583, 3862, 4128
Bsp1407I TGTACA 4 cut(s) 2471, 3585, 3892, 4104
BspANI GGCC 6 cut(s) 392, 473, 1439, 1656, 2031, 2220
BspDI ATCGAT 1 cut(s) 3634
BspFNI CGCG 3 cut(s) 771, 801, 3002
BspHI TCATGA 1 cut(s) 3337
BspMAI CTGCAG 5 cut(s) 135, 669, 704, 877, 920
BspMI ACCTGC 1 cut(s) 878
BspOI GCTAGC 1 cut(s) 729
BspQI GCTCTTC 1 cut(s) 1569
BspT104I TTCGAA 1 cut(s) 3744
BspT107I GGYRCC 2 cut(s) 686, 3857
BspTI CTTAAG 2 cut(s) 3428, 3622
BspTNI GGTCTC 1 cut(s) 1695
BsrBI CCGCTC 1 cut(s) 601
BsrFI RCCGGY 2 cut(s) 2299, 2730
BsrGI TGTACA 4 cut(s) 2471, 3585, 3892, 4104
BsrI ACTGG 5 cut(s) 332, 1431, 1457, 3249, 3399
BssAI RCCGGY 2 cut(s) 2299, 2730
BssECI CCNNGG 7 cut(s) 387, 650, 1705, 3000, 3316, 3325, 3995
BssHII GCGCGC 1 cut(s) 769
BssNI GRCGYC 1 cut(s) 5
BssSI CACGAG 1 cut(s) 764
Bst2BI CACGAG 1 cut(s) 764
Bst2UI CCWGG 9 cut(s) 206, 651, 2028, 2565, 3192, 3318, 3327, 3996, 4048
Bst4CI ACNGT 9 cut(s) 469, 1271, 1726, 1764, 1958, 2383, 3011, 3241, 3251
Bst6I CTCTTC 3 cut(s) 1569, 2130, 2286
BstACI GRCGYC 1 cut(s) 5
BstAFI CTTAAG 2 cut(s) 3428, 3622
BstAPI GCANNNNNTGC 6 cut(s) 664, 754, 872, 893, 902, 3549
BstAUI TGTACA 4 cut(s) 2471, 3585, 3892, 4104
BstBAI YACGTR 2 cut(s) 3528, 3807
BstBI TTCGAA 1 cut(s) 3744
BstDSI CCRYGG 1 cut(s) 3000
BstENI CCTNNNNNAGG 1 cut(s) 1608
BstF5I GGATG 8 cut(s) 491, 623, 1342, 2491, 2941, 3816, 3921, 4171
BstFNI CGCG 3 cut(s) 771, 801, 3002
BstHHI GCGC 7 cut(s) 748, 763, 771, 773, 801, 826, 3762
BstMAI GTCTC 5 cut(s) 306, 358, 1695, 2744, 3407
BstNI CCWGG 9 cut(s) 206, 651, 2028, 2565, 3192, 3318, 3327, 3996, 4048
BstNSI RCATGY 6 cut(s) 1836, 2692, 2991, 3552, 4071, 4111
BstSFI CTRYAG 7 cut(s) 131, 665, 700, 873, 916, 3088, 3134
BstSLI GKGCMC 1 cut(s) 3862
BstUI CGCG 3 cut(s) 771, 801, 3002
BstV2I GAAGAC 6 cut(s) 27, 414, 432, 1181, 1455, 2521
BstX2I RGATCY 7 cut(s) 349, 1682, 2389, 2649, 2860, 3034, 4092
BstYI RGATCY 7 cut(s) 349, 1682, 2389, 2649, 2860, 3034, 4092
Bsu15I ATCGAT 1 cut(s) 3634
Bsu36I CCTNAGG 1 cut(s) 2127
BsuI GTATCC 1 cut(s) 2277
BsuRI GGCC 6 cut(s) 392, 473, 1439, 1656, 2031, 2220
BsuTUI ATCGAT 1 cut(s) 3634
BtgI CCRYGG 1 cut(s) 3000
BtrI CACGTC 3 cut(s) 33, 67, 430
BtsCI GGATG 8 cut(s) 491, 623, 1342, 2491, 2941, 3816, 3921, 4171
BtsI GCAGTG 3 cut(s) 140, 240, 674
BtsIMutI CAGTG 5 cut(s) 140, 240, 474, 674, 1760
BveI ACCTGC 1 cut(s) 878
CaiI CAGNNNCTG 3 cut(s) 664, 872, 893
CciI TCATGA 1 cut(s) 3337
CfoI GCGC 7 cut(s) 748, 763, 771, 773, 801, 826, 3762
Cfr10I RCCGGY 2 cut(s) 2299, 2730
Cfr13I GGNCC 2 cut(s) 112, 2219
Cfr42I CCGCGG 1 cut(s) 3003
ClaI ATCGAT 1 cut(s) 3634
CseI GACGC 2 cut(s) 626, 790
CsiI ACCWGGT 1 cut(s) 4046
CspCI CAANNNNNGTGG 4 cut(s) 592, 627, 3027, 3062
DraI TTTAAA 1 cut(s) 2529
DraIII CACNNNGTG 1 cut(s) 273
EaeI YGGCCR 3 cut(s) 471, 1437, 2029
Eam1104I CTCTTC 3 cut(s) 1569, 2130, 2286
EarI CTCTTC 3 cut(s) 1569, 2130, 2286
EciI GGCGGA 1 cut(s) 938
Eco147I AGGCCT 2 cut(s) 392, 1656
Eco24I GRGCYC 3 cut(s) 204, 834, 4128
Eco31I GGTCTC 1 cut(s) 1695
Eco47I GGWCC 1 cut(s) 112
Eco57I CTGAAG 9 cut(s) 27, 1550, 1626, 2201, 2795, 3131, 3327, 3864, 4094
Eco72I CACGTG 1 cut(s) 3528
Eco81I CCTNAGG 1 cut(s) 2127
EcoNI CCTNNNNNAGG 1 cut(s) 1608
EcoO109I RGGNCCY 1 cut(s) 2219
EcoRI GAATTC 2 cut(s) 2559, 4037
EcoRII CCWGG 9 cut(s) 204, 649, 2026, 2563, 3190, 3316, 3325, 3994, 4046
EcoT22I ATGCAT 1 cut(s) 1971
EcoT38I GRGCYC 3 cut(s) 204, 834, 4128
FalI AAGNNNNNCTT 2 cut(s) 1622, 1654
FaqI GGGAC 4 cut(s) 173, 334, 2069, 3308
FauI CCCGC 6 cut(s) 104, 687, 728, 931, 3563, 4082
FauNDI CATATG 1 cut(s) 2117
FbaI TGATCA 1 cut(s) 1753
FokI GGATG 8 cut(s) 498, 610, 1349, 2478, 2948, 3823, 3928, 4178
FriOI GRGCYC 3 cut(s) 204, 834, 4128
GlaI GCGC 7 cut(s) 747, 762, 770, 772, 800, 825, 3761
GsaI CCCAGC 2 cut(s) 679, 777
HaeIII GGCC 6 cut(s) 392, 473, 1439, 1656, 2031, 2220
HapII CCGG 5 cut(s) 1440, 2300, 2731, 3384, 3854
HgaI GACGC 2 cut(s) 626, 790
HhaI GCGC 7 cut(s) 748, 763, 771, 773, 801, 826, 3762
Hin1I GRCGYC 1 cut(s) 5
Hin6I GCGC 7 cut(s) 746, 761, 769, 771, 799, 824, 3760
HinP1I GCGC 7 cut(s) 746, 761, 769, 771, 799, 824, 3760
HincII GTYRAC 4 cut(s) 1941, 2379, 2485, 2872
HindII GTYRAC 4 cut(s) 1941, 2379, 2485, 2872
HpaI GTTAAC 1 cut(s) 1941
HpaII CCGG 5 cut(s) 1440, 2300, 2731, 3384, 3854
Hpy166II GTNNAC 9 cut(s) 1502, 1941, 2379, 2485, 2872, 3128, 3772, 3895, 4029
Hpy8I GTNNAC 9 cut(s) 1502, 1941, 2379, 2485, 2872, 3128, 3772, 3895, 4029
Hpy99I CGWCG 3 cut(s) 10, 68, 806
HpyCH4III ACNGT 9 cut(s) 469, 1271, 1726, 1764, 1958, 2383, 3011, 3241, 3251
HpyCH4IV ACGT 9 cut(s) 32, 66, 429, 1498, 3124, 3527, 3806, 4031, 4152
HpySE526I ACGT 9 cut(s) 32, 66, 429, 1498, 3124, 3527, 3806, 4031, 4152
Hsp92I GRCGYC 1 cut(s) 5
HspAI GCGC 7 cut(s) 746, 761, 769, 771, 799, 824, 3760
Ksp22I TGATCA 1 cut(s) 1753
KspAI GTTAAC 1 cut(s) 1941
KspI CCGCGG 1 cut(s) 3003
LguI GCTCTTC 1 cut(s) 1569
LmnI GCTCC 9 cut(s) 207, 378, 821, 1750, 2344, 2955, 3302, 3839, 3935
LweI GCATC 5 cut(s) 445, 1058, 2227, 2335, 3906
MabI ACCWGGT 1 cut(s) 4046
MaeII ACGT 9 cut(s) 32, 66, 429, 1498, 3124, 3527, 3806, 4031, 4152
MaeIII GTNAC 3 cut(s) 614, 1480, 2995
MbiI CCGCTC 1 cut(s) 601
MfeI CAATTG 2 cut(s) 213, 2957
MflI RGATCY 7 cut(s) 349, 1682, 2389, 2649, 2860, 3034, 4092
MhlI GDGCHC 5 cut(s) 204, 834, 3583, 3862, 4128
MlsI TGGCCA 2 cut(s) 473, 2031
MluNI TGGCCA 2 cut(s) 473, 2031
MlyI GAGTC 3 cut(s) 1067, 2021, 2746
MmeI TCCRAC 6 cut(s) 1057, 1559, 2977, 3356, 3414, 3893
Mox20I TGGCCA 2 cut(s) 473, 2031
Mph1103I ATGCAT 1 cut(s) 1971
MroXI GAANNNNTTC 3 cut(s) 1084, 1563, 2229
MscI TGGCCA 2 cut(s) 473, 2031
MslI CAYNNNNRTG 4 cut(s) 2435, 2790, 3978, 4021
Msp20I TGGCCA 2 cut(s) 473, 2031
MspA1I CMGCKG 2 cut(s) 3002, 3139
MspCI CTTAAG 2 cut(s) 3428, 3622
MspI CCGG 5 cut(s) 1440, 2300, 2731, 3384, 3854
MunI CAATTG 2 cut(s) 213, 2957
MvaI CCWGG 9 cut(s) 206, 651, 2028, 2565, 3192, 3318, 3327, 3996, 4048
MvnI CGCG 3 cut(s) 771, 801, 3002
NciI CCSGG 2 cut(s) 3384, 3855
NdeI CATATG 1 cut(s) 2117
NheI GCTAGC 1 cut(s) 725
NmeAIII GCCGAG 1 cut(s) 412
NmuCI GTSAC 2 cut(s) 614, 2995
NsiI ATGCAT 1 cut(s) 1971
NspI RCATGY 6 cut(s) 1836, 2692, 2991, 3552, 4071, 4111
NspV TTCGAA 1 cut(s) 3744
OliI CACNNNNGTG 1 cut(s) 3978
PaeI GCATGC 3 cut(s) 2692, 3552, 4071
PagI TCATGA 1 cut(s) 3337
PaqCI CACCTGC 1 cut(s) 878
PauI GCGCGC 1 cut(s) 769
PceI AGGCCT 2 cut(s) 392, 1656
PciI ACATGT 1 cut(s) 2987
PciSI GCTCTTC 1 cut(s) 1569
PcsI WCGNNNNNNNCGW 1 cut(s) 624
PdmI GAANNNNTTC 3 cut(s) 1084, 1563, 2229
PfeI GAWTC 8 cut(s) 144, 491, 1085, 1206, 1675, 2149, 2582, 3631
PfoI TCCNGGA 1 cut(s) 3190
PleI GAGTC 3 cut(s) 1066, 2020, 2745
PmaCI CACGTG 1 cut(s) 3528
PmlI CACGTG 1 cut(s) 3528
PpsI GAGTC 3 cut(s) 1066, 2020, 2745
Ppu21I YACGTR 2 cut(s) 3528, 3807
PscI ACATGT 1 cut(s) 2987
PsiI TTATAA 1 cut(s) 1377
Psp1406I AACGTT 1 cut(s) 1498
Psp6I CCWGG 9 cut(s) 204, 649, 2026, 2563, 3190, 3316, 3325, 3994, 4046
PspCI CACGTG 1 cut(s) 3528
PspFI CCCAGC 2 cut(s) 675, 773
PspGI CCWGG 9 cut(s) 204, 649, 2026, 2563, 3190, 3316, 3325, 3994, 4046
PspPI GGNCC 2 cut(s) 112, 2219
PsrI GAACNNNNNNTAC 4 cut(s) 3876, 3908, 3975, 4007
PstI CTGCAG 5 cut(s) 135, 669, 704, 877, 920
PstNI CAGNNNCTG 3 cut(s) 664, 872, 893
PsuI RGATCY 7 cut(s) 349, 1682, 2389, 2649, 2860, 3034, 4092
PteI GCGCGC 1 cut(s) 769
RseI CAYNNNNRTG 4 cut(s) 2435, 2790, 3978, 4021
SacII CCGCGG 1 cut(s) 3003
SapI GCTCTTC 1 cut(s) 1569
Sau96I GGNCC 2 cut(s) 112, 2219
ScaI AGTACT 1 cut(s) 2366
SchI GAGTC 3 cut(s) 1067, 2021, 2746
SduI GDGCHC 5 cut(s) 204, 834, 3583, 3862, 4128
SexAI ACCWGGT 1 cut(s) 4046
SfaNI GCATC 5 cut(s) 445, 1058, 2227, 2335, 3906
SfcI CTRYAG 7 cut(s) 131, 665, 700, 873, 916, 3088, 3134
Sfr303I CCGCGG 1 cut(s) 3003
SfuI TTCGAA 1 cut(s) 3744
SgrBI CCGCGG 1 cut(s) 3003
SinI GGWCC 1 cut(s) 112
SmiMI CAYNNNNRTG 4 cut(s) 2435, 2790, 3978, 4021
SmlI CTYRAG 5 cut(s) 881, 1841, 2447, 3428, 3622
SmoI CTYRAG 5 cut(s) 881, 1841, 2447, 3428, 3622
SpeI ACTAGT 5 cut(s) 1393, 1504, 1901, 3263, 3749
SphI GCATGC 3 cut(s) 2692, 3552, 4071
SseBI AGGCCT 2 cut(s) 392, 1656
StuI AGGCCT 2 cut(s) 392, 1656
TaaI ACNGT 9 cut(s) 469, 1271, 1726, 1764, 1958, 2383, 3011, 3241, 3251
TaiI ACGT 9 cut(s) 35, 69, 432, 1501, 3127, 3530, 3809, 4034, 4155
TaqII GACCGA 2 cut(s) 1719, 3795
TatI WGTACW 7 cut(s) 1721, 2071, 2364, 2471, 3585, 3892, 4104
TauI GCSGC 4 cut(s) 601, 866, 908, 2985
TfiI GAWTC 8 cut(s) 144, 491, 1085, 1206, 1675, 2149, 2582, 3631
TscAI CASTG 5 cut(s) 140, 240, 474, 674, 1767
TseFI GTSAC 2 cut(s) 614, 2995
Tsp45I GTSAC 2 cut(s) 614, 2995
TspGWI ACGGA 5 cut(s) 125, 616, 1994, 2662, 4085
TspRI CASTG 5 cut(s) 140, 240, 474, 674, 1767
Vha464I CTTAAG 2 cut(s) 3428, 3622
VpaK11BI GGWCC 1 cut(s) 112
XagI CCTNNNNNAGG 1 cut(s) 1608
XapI RAATTY 9 cut(s) 1069, 2200, 2290, 2476, 2530, 2559, 3658, 3900, 4037
XbaI TCTAGA 1 cut(s) 518
XceI RCATGY 6 cut(s) 1836, 2692, 2991, 3552, 4071, 4111
XmnI GAANNNNTTC 3 cut(s) 1084, 1563, 2229
ZrmI AGTACT 1 cut(s) 2366
Zsp2I ATGCAT 1 cut(s) 1971
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.