TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| LRR_13 | PF23286 | 40 - 124 | 1e-07 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 45 - 158 | 2.2e-10 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 186 - 260 | 5e-08 | Leucine-rich repeat region |
| C-JID | PF20160 | 339 - 464 | 3.8e-13 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 1324 |
| AciI | CCGC | 3 cut(s) | 520, 981, 1313 |
| AclI | AACGTT | 1 cut(s) | 130 |
| AclWI | GGATC | 4 cut(s) | 490, 848, 861, 974 |
| AcsI | RAATTY | 7 cut(s) | 13, 165, 173, 193, 974, 1072, 1182 |
| AcuI | CTGAAG | 1 cut(s) | 725 |
| AcyI | GRCGYC | 1 cut(s) | 1158 |
| AfaI | GTAC | 4 cut(s) | 10, 27, 832, 1376 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 557, 843, 1025, 1026 |
| AflIII | ACRYGT | 1 cut(s) | 1301 |
| AhlI | ACTAGT | 1 cut(s) | 442 |
| AjnI | CCWGG | 1 cut(s) | 382 |
| AluBI | AGCT | 7 cut(s) | 109, 660, 804, 1081, 1104, 1451, 1490 |
| AluI | AGCT | 7 cut(s) | 109, 660, 804, 1081, 1104, 1451, 1490 |
| Alw26I | GTCTC | 3 cut(s) | 101, 339, 464 |
| AlwI | GGATC | 4 cut(s) | 490, 848, 861, 974 |
| Ama87I | CYCGRG | 2 cut(s) | 1034, 1266 |
| AoxI | GGCC | 2 cut(s) | 262, 511 |
| ApeKI | GCWGC | 3 cut(s) | 870, 1101, 1448 |
| ApoI | RAATTY | 7 cut(s) | 13, 165, 173, 193, 974, 1072, 1182 |
| AseI | ATTAAT | 1 cut(s) | 282 |
| AspS9I | GGNCC | 1 cut(s) | 511 |
| AsuC2I | CCSGG | 1 cut(s) | 1020 |
| AsuHPI | GGTGA | 4 cut(s) | 632, 641, 647, 1360 |
| AsuII | TTCGAA | 1 cut(s) | 1179 |
| AvaI | CYCGRG | 2 cut(s) | 1034, 1266 |
| BaeI | ACNNNNGTAYC | 6 cut(s) | 17, 50, 728, 761, 1022, 1055 |
| BamHI | GGATCC | 1 cut(s) | 853 |
| BanII | GRGCYC | 1 cut(s) | 1366 |
| BbsI | GAAGAC | 2 cut(s) | 945, 1278 |
| BbvI | GCAGC | 3 cut(s) | 882, 1113, 1460 |
| BccI | CCATC | 3 cut(s) | 385, 818, 1102 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 859, 893 |
| BciT130I | CCWGG | 1 cut(s) | 384 |
| BciVI | GTATCC | 1 cut(s) | 1023 |
| BcnI | CCSGG | 1 cut(s) | 1020 |
| BcoDI | GTCTC | 3 cut(s) | 101, 339, 464 |
| BcuI | ACTAGT | 1 cut(s) | 442 |
| BfaI | CTAG | 2 cut(s) | 110, 443 |
| BfuI | GTATCC | 1 cut(s) | 1023 |
| BglII | AGATCT | 3 cut(s) | 136, 682, 787 |
| BisI | GCNGC | 4 cut(s) | 871, 981, 1102, 1449 |
| BlsI | GCNGC | 4 cut(s) | 872, 982, 1103, 1450 |
| Bme1390I | CCNGG | 2 cut(s) | 384, 1020 |
| BmeT110I | CYCGRG | 2 cut(s) | 1034, 1266 |
| BmgT120I | GGNCC | 1 cut(s) | 511 |
| BmiI | GGNNCC | 3 cut(s) | 512, 855, 1284 |
| BmrFI | CCNGG | 2 cut(s) | 384, 1020 |
| BmsI | GCATC | 3 cut(s) | 137, 729, 1300 |
| BpiI | GAAGAC | 2 cut(s) | 945, 1278 |
| Bpu10I | CCTNAGC | 1 cut(s) | 984 |
| Bpu14I | TTCGAA | 1 cut(s) | 1179 |
| BpuEI | CTTGAG | 1 cut(s) | 794 |
| BpuMI | CCSGG | 1 cut(s) | 1020 |
| BsaHI | GRCGYC | 1 cut(s) | 1158 |
| BsaJI | CCNNGG | 3 cut(s) | 383, 497, 1018 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 557, 843, 1025, 1026 |
| Bse1I | ACTGG | 1 cut(s) | 947 |
| BseBI | CCWGG | 1 cut(s) | 384 |
| BseDI | CCNNGG | 3 cut(s) | 383, 497, 1018 |
| BseGI | GGATG | 4 cut(s) | 152, 951, 1113, 1325 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 557, 843, 1025, 1026 |
| BseMII | CTCAG | 2 cut(s) | 306, 1188 |
| BseNI | ACTGG | 1 cut(s) | 947 |
| BseRI | GAGGAG | 1 cut(s) | 1077 |
| BseXI | GCAGC | 3 cut(s) | 882, 1113, 1460 |
| BshFI | GGCC | 2 cut(s) | 264, 513 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1034, 1266 |
| BsiSI | CCGG | 1 cut(s) | 1020 |
| BslFI | GGGAC | 3 cut(s) | 232, 515, 1074 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 557, 843, 1025, 1026 |
| BsmAI | GTCTC | 3 cut(s) | 101, 339, 464 |
| BsmFI | GGGAC | 3 cut(s) | 232, 515, 1074 |
| BsnI | GGCC | 2 cut(s) | 264, 513 |
| BsoBI | CYCGRG | 2 cut(s) | 1034, 1266 |
| Bsp119I | TTCGAA | 1 cut(s) | 1179 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1366 |
| Bsp1407I | TGTACA | 1 cut(s) | 1374 |
| Bsp143I | GATC | 6 cut(s) | 136, 482, 682, 787, 853, 966 |
| BspACI | CCGC | 3 cut(s) | 520, 981, 1313 |
| BspANI | GGCC | 2 cut(s) | 264, 513 |
| BspCNI | CTCAG | 2 cut(s) | 307, 1189 |
| BspLI | GGNNCC | 3 cut(s) | 512, 855, 1284 |
| BspPI | GGATC | 4 cut(s) | 490, 848, 861, 974 |
| BspQI | GCTCTTC | 1 cut(s) | 1218 |
| BspT104I | TTCGAA | 1 cut(s) | 1179 |
| BsrGI | TGTACA | 1 cut(s) | 1374 |
| BsrI | ACTGG | 1 cut(s) | 947 |
| BssECI | CCNNGG | 3 cut(s) | 383, 497, 1018 |
| BssMI | GATC | 6 cut(s) | 136, 482, 682, 787, 853, 966 |
| BssNI | GRCGYC | 1 cut(s) | 1158 |
| BssT1I | CCWWGG | 1 cut(s) | 497 |
| Bst2UI | CCWGG | 1 cut(s) | 384 |
| Bst4CI | ACNGT | 4 cut(s) | 80, 1057, 1277, 1287 |
| Bst6I | CTCTTC | 2 cut(s) | 1218, 1437 |
| BstACI | GRCGYC | 1 cut(s) | 1158 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 726 |
| BstAUI | TGTACA | 1 cut(s) | 1374 |
| BstBI | TTCGAA | 1 cut(s) | 1179 |
| BstC8I | GCNNGC | 2 cut(s) | 470, 474 |
| BstDEI | CTNAG | 4 cut(s) | 315, 686, 984, 1197 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 841 |
| BstF5I | GGATG | 4 cut(s) | 152, 951, 1113, 1325 |
| BstKTI | GATC | 6 cut(s) | 139, 485, 685, 790, 856, 969 |
| BstMAI | GTCTC | 3 cut(s) | 101, 339, 464 |
| BstMBI | GATC | 6 cut(s) | 136, 482, 682, 787, 853, 966 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 519, 726 |
| BstNI | CCWGG | 1 cut(s) | 384 |
| BstNSI | RCATGY | 2 cut(s) | 476, 1305 |
| BstSCI | CCNGG | 2 cut(s) | 382, 1018 |
| BstV1I | GCAGC | 3 cut(s) | 882, 1113, 1460 |
| BstV2I | GAAGAC | 2 cut(s) | 945, 1278 |
| BstX2I | RGATCY | 4 cut(s) | 136, 682, 787, 853 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 653 |
| BstYI | RGATCY | 4 cut(s) | 136, 682, 787, 853 |
| BsuI | GTATCC | 1 cut(s) | 1023 |
| BsuRI | GGCC | 2 cut(s) | 264, 513 |
| BtsCI | GGATG | 4 cut(s) | 152, 951, 1113, 1325 |
| BtsIMutI | CAGTG | 1 cut(s) | 1406 |
| Cac8I | GCNNGC | 2 cut(s) | 470, 474 |
| Cfr13I | GGNCC | 1 cut(s) | 511 |
| CseI | GACGC | 1 cut(s) | 1166 |
| Csp6I | GTAC | 4 cut(s) | 9, 26, 831, 1375 |
| CviAII | CATG | 6 cut(s) | 473, 545, 647, 1095, 1302, 1430 |
| CviQI | GTAC | 4 cut(s) | 9, 26, 831, 1375 |
| DdeI | CTNAG | 4 cut(s) | 315, 686, 984, 1197 |
| DpnI | GATC | 6 cut(s) | 138, 484, 684, 789, 855, 968 |
| DpnII | GATC | 6 cut(s) | 136, 482, 682, 787, 853, 966 |
| DraI | TTTAAA | 1 cut(s) | 579 |
| Eam1104I | CTCTTC | 2 cut(s) | 1218, 1437 |
| EarI | CTCTTC | 2 cut(s) | 1218, 1437 |
| Eco130I | CCWWGG | 1 cut(s) | 497 |
| Eco24I | GRGCYC | 1 cut(s) | 1366 |
| Eco32I | GATATC | 1 cut(s) | 640 |
| Eco57I | CTGAAG | 1 cut(s) | 725 |
| Eco88I | CYCGRG | 2 cut(s) | 1034, 1266 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 841 |
| EcoO109I | RGGNCCY | 1 cut(s) | 511 |
| EcoRI | GAATTC | 1 cut(s) | 165 |
| EcoRII | CCWGG | 1 cut(s) | 382 |
| EcoRV | GATATC | 1 cut(s) | 640 |
| EcoT14I | CCWWGG | 1 cut(s) | 497 |
| EcoT38I | GRGCYC | 1 cut(s) | 1366 |
| ErhI | CCWWGG | 1 cut(s) | 497 |
| FaeI | CATG | 6 cut(s) | 476, 548, 650, 1098, 1305, 1433 |
| FaqI | GGGAC | 3 cut(s) | 232, 515, 1074 |
| FatI | CATG | 6 cut(s) | 472, 544, 646, 1094, 1301, 1429 |
| FauI | CCCGC | 1 cut(s) | 1306 |
| FauNDI | CATATG | 1 cut(s) | 585 |
| FblI | GTMKAC | 1 cut(s) | 1324 |
| Fnu4HI | GCNGC | 4 cut(s) | 871, 981, 1102, 1449 |
| FokI | GGATG | 4 cut(s) | 159, 958, 1120, 1332 |
| FriOI | GRGCYC | 1 cut(s) | 1366 |
| Fsp4HI | GCNGC | 4 cut(s) | 871, 981, 1102, 1449 |
| FspBI | CTAG | 2 cut(s) | 110, 443 |
| GluI | GCNGC | 4 cut(s) | 871, 981, 1102, 1449 |
| HaeIII | GGCC | 2 cut(s) | 264, 513 |
| HapII | CCGG | 1 cut(s) | 1020 |
| HgaI | GACGC | 1 cut(s) | 1166 |
| Hin1I | GRCGYC | 1 cut(s) | 1158 |
| Hin1II | CATG | 6 cut(s) | 476, 548, 650, 1098, 1305, 1433 |
| HincII | GTYRAC | 1 cut(s) | 1325 |
| HindII | GTYRAC | 1 cut(s) | 1325 |
| HinfI | GANTC | 5 cut(s) | 94, 119, 876, 990, 1326 |
| HpaII | CCGG | 1 cut(s) | 1020 |
| HphI | GGTGA | 4 cut(s) | 632, 641, 647, 1360 |
| Hpy166II | GTNNAC | 4 cut(s) | 28, 601, 1325, 1375 |
| Hpy188I | TCNGA | 4 cut(s) | 853, 912, 1212, 1240 |
| Hpy188III | TCNNGA | 6 cut(s) | 170, 970, 1154, 1266, 1280, 1417 |
| Hpy8I | GTNNAC | 4 cut(s) | 28, 601, 1325, 1375 |
| HpyAV | CCTTC | 6 cut(s) | 249, 626, 719, 751, 804, 1172 |
| HpyCH4III | ACNGT | 4 cut(s) | 80, 1057, 1277, 1287 |
| HpyCH4IV | ACGT | 2 cut(s) | 130, 613 |
| HpyCH4V | TGCA | 5 cut(s) | 41, 291, 472, 918, 1136 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 519, 726 |
| HpyF3I | CTNAG | 4 cut(s) | 315, 686, 984, 1197 |
| HpySE526I | ACGT | 2 cut(s) | 130, 613 |
| Hsp92I | GRCGYC | 1 cut(s) | 1158 |
| Hsp92II | CATG | 6 cut(s) | 476, 548, 650, 1098, 1305, 1433 |
| Kzo9I | GATC | 6 cut(s) | 136, 482, 682, 787, 853, 966 |
| LguI | GCTCTTC | 1 cut(s) | 1218 |
| LmnI | GCTCC | 3 cut(s) | 155, 1078, 1456 |
| Lsp1109I | GCAGC | 3 cut(s) | 882, 1113, 1460 |
| LweI | GCATC | 3 cut(s) | 137, 729, 1300 |
| MaeI | CTAG | 2 cut(s) | 110, 443 |
| MaeII | ACGT | 2 cut(s) | 130, 613 |
| MaeIII | GTNAC | 1 cut(s) | 703 |
| MalI | GATC | 6 cut(s) | 138, 484, 684, 789, 855, 968 |
| MboI | GATC | 6 cut(s) | 136, 482, 682, 787, 853, 966 |
| MboII | GAAGA | 8 cut(s) | 400, 782, 944, 950, 1235, 1283, 1403, 1454 |
| MfeI | CAATTG | 2 cut(s) | 246, 486 |
| MflI | RGATCY | 4 cut(s) | 136, 682, 787, 853 |
| MhlI | GDGCHC | 1 cut(s) | 1366 |
| MlyI | GAGTC | 2 cut(s) | 103, 1320 |
| MmeI | TCCRAC | 1 cut(s) | 831 |
| MnlI | CCTC | 9 cut(s) | 16, 397, 676, 844, 868, 1095, 1098, 1310, 1438 |
| MseI | TTAA | 7 cut(s) | 48, 57, 90, 282, 339, 578, 839 |
| MslI | CAYNNNNRTG | 1 cut(s) | 477 |
| MspA1I | CMGCKG | 1 cut(s) | 1104 |
| MspI | CCGG | 1 cut(s) | 1020 |
| MspR9I | CCNGG | 2 cut(s) | 384, 1020 |
| MunI | CAATTG | 2 cut(s) | 246, 486 |
| MvaI | CCWGG | 1 cut(s) | 384 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 519, 726 |
| NciI | CCSGG | 1 cut(s) | 1020 |
| NdeI | CATATG | 1 cut(s) | 585 |
| NdeII | GATC | 6 cut(s) | 136, 482, 682, 787, 853, 966 |
| NlaIII | CATG | 6 cut(s) | 476, 548, 650, 1098, 1305, 1433 |
| NlaIV | GGNNCC | 3 cut(s) | 512, 855, 1284 |
| NspI | RCATGY | 2 cut(s) | 476, 1305 |
| NspV | TTCGAA | 1 cut(s) | 1179 |
| PaeI | GCATGC | 1 cut(s) | 476 |
| PciI | ACATGT | 1 cut(s) | 1301 |
| PciSI | GCTCTTC | 1 cut(s) | 1218 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 857 |
| PfeI | GAWTC | 3 cut(s) | 119, 876, 990 |
| PkrI | GCNGC | 4 cut(s) | 872, 982, 1103, 1450 |
| PleI | GAGTC | 2 cut(s) | 102, 1320 |
| PpsI | GAGTC | 2 cut(s) | 102, 1320 |
| PscI | ACATGT | 1 cut(s) | 1301 |
| PshBI | ATTAAT | 1 cut(s) | 282 |
| Psp1406I | AACGTT | 1 cut(s) | 130 |
| Psp6I | CCWGG | 1 cut(s) | 382 |
| PspGI | CCWGG | 1 cut(s) | 382 |
| PspN4I | GGNNCC | 3 cut(s) | 512, 855, 1284 |
| PspPI | GGNCC | 1 cut(s) | 511 |
| PsuI | RGATCY | 4 cut(s) | 136, 682, 787, 853 |
| PvuII | CAGCTG | 1 cut(s) | 1104 |
| RsaI | GTAC | 4 cut(s) | 10, 27, 832, 1376 |
| RsaNI | GTAC | 4 cut(s) | 9, 26, 831, 1375 |
| RseI | CAYNNNNRTG | 1 cut(s) | 477 |
| SalI | GTCGAC | 1 cut(s) | 1323 |
| SapI | GCTCTTC | 1 cut(s) | 1218 |
| SaqAI | TTAA | 7 cut(s) | 48, 57, 90, 282, 339, 578, 839 |
| SatI | GCNGC | 4 cut(s) | 871, 981, 1102, 1449 |
| Sau3AI | GATC | 6 cut(s) | 136, 482, 682, 787, 853, 966 |
| Sau96I | GGNCC | 1 cut(s) | 511 |
| SchI | GAGTC | 2 cut(s) | 103, 1320 |
| ScrFI | CCNGG | 2 cut(s) | 384, 1020 |
| SduI | GDGCHC | 1 cut(s) | 1366 |
| SfaNI | GCATC | 3 cut(s) | 137, 729, 1300 |
| SfuI | TTCGAA | 1 cut(s) | 1179 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 477 |
| SmlI | CTYRAG | 1 cut(s) | 773 |
| SmoI | CTYRAG | 1 cut(s) | 773 |
| SpeI | ACTAGT | 1 cut(s) | 442 |
| SphI | GCATGC | 1 cut(s) | 476 |
| SsiI | CCGC | 3 cut(s) | 520, 981, 1313 |
| SspI | AATATT | 2 cut(s) | 886, 1169 |
| SspMI | CTAG | 2 cut(s) | 110, 443 |
| StyD4I | CCNGG | 2 cut(s) | 382, 1018 |
| StyI | CCWWGG | 1 cut(s) | 497 |
| TaaI | ACNGT | 4 cut(s) | 80, 1057, 1277, 1287 |
| TaiI | ACGT | 2 cut(s) | 133, 616 |
| TaqI | TCGA | 4 cut(s) | 372, 860, 1179, 1324 |
| TatI | WGTACW | 1 cut(s) | 1374 |
| TauI | GCSGC | 1 cut(s) | 983 |
| TfiI | GAWTC | 3 cut(s) | 119, 876, 990 |
| Tru1I | TTAA | 7 cut(s) | 48, 57, 90, 282, 339, 578, 839 |
| Tru9I | TTAA | 7 cut(s) | 48, 57, 90, 282, 339, 578, 839 |
| TscAI | CASTG | 1 cut(s) | 1413 |
| TseI | GCWGC | 3 cut(s) | 870, 1101, 1448 |
| TspDTI | ATGAA | 7 cut(s) | 198, 203, 467, 951, 962, 1194, 1281 |
| TspRI | CASTG | 1 cut(s) | 1413 |
| VspI | ATTAAT | 1 cut(s) | 282 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 841 |
| XapI | RAATTY | 7 cut(s) | 13, 165, 173, 193, 974, 1072, 1182 |
| XceI | RCATGY | 2 cut(s) | 476, 1305 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 504 |
| XmiI | GTMKAC | 1 cut(s) | 1324 |
| XspI | CTAG | 2 cut(s) | 110, 443 |