TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 4 - 97 | 5.9e-16 | TIR domain |
| NB-ARC | PF00931 | 114 - 270 | 2.6e-23 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 338 - 409 | 5.3e-14 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_13 | PF23286 | 598 - 803 | 2.9e-08 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 704 - 779 | 1.1e-09 | Leucine-rich repeat region |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 2 cut(s) | 1492, 2692 |
| AciI | CCGC | 3 cut(s) | 92, 2418, 2466 |
| AclI | AACGTT | 1 cut(s) | 712 |
| AclWI | GGATC | 2 cut(s) | 633, 1309 |
| AcuI | CTGAAG | 3 cut(s) | 971, 1386, 2165 |
| AcvI | CACGTG | 1 cut(s) | 1282 |
| AfaI | GTAC | 7 cut(s) | 57, 908, 1684, 2010, 2380, 2558, 2623 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 282, 1426, 1780, 2348 |
| AjiI | CACGTC | 1 cut(s) | 2538 |
| AjnI | CCWGG | 4 cut(s) | 1237, 1986, 2617, 2656 |
| Alw21I | GWGCWC | 4 cut(s) | 476, 940, 1287, 2397 |
| Alw26I | GTCTC | 2 cut(s) | 1775, 1967 |
| Alw44I | GTGCAC | 1 cut(s) | 936 |
| AlwI | GGATC | 2 cut(s) | 633, 1309 |
| Ama87I | CYCGRG | 1 cut(s) | 1658 |
| AoxI | GGCC | 1 cut(s) | 1429 |
| ApaI | GGGCCC | 1 cut(s) | 1433 |
| ApaLI | GTGCAC | 1 cut(s) | 936 |
| ApeKI | GCWGC | 5 cut(s) | 444, 505, 1537, 1821, 2287 |
| AseI | ATTAAT | 1 cut(s) | 2298 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 298, 1806, 1868 |
| AspLEI | GCGC | 1 cut(s) | 1112 |
| AspS9I | GGNCC | 4 cut(s) | 1429, 1430, 1629, 2615 |
| AsuC2I | CCSGG | 1 cut(s) | 679 |
| AsuHPI | GGTGA | 2 cut(s) | 1547, 2090 |
| AsuII | TTCGAA | 1 cut(s) | 2511 |
| AvaI | CYCGRG | 1 cut(s) | 1658 |
| AvaII | GGWCC | 2 cut(s) | 1629, 2615 |
| BaeGI | GKGCMC | 2 cut(s) | 940, 1433 |
| BanII | GRGCYC | 1 cut(s) | 1433 |
| BbrPI | CACGTG | 1 cut(s) | 1282 |
| BbsI | GAAGAC | 1 cut(s) | 863 |
| Bbv12I | GWGCWC | 4 cut(s) | 476, 940, 1287, 2397 |
| BbvCI | CCTCAGC | 1 cut(s) | 1391 |
| BbvI | GCAGC | 5 cut(s) | 456, 517, 1549, 1808, 2274 |
| BccI | CCATC | 6 cut(s) | 69, 367, 476, 733, 995, 1559 |
| BceAI | ACGGC | 1 cut(s) | 2365 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 71, 105, 1105, 1139 |
| BciT130I | CCWGG | 4 cut(s) | 1239, 1988, 2619, 2658 |
| BciVI | GTATCC | 1 cut(s) | 1488 |
| BcnI | CCSGG | 1 cut(s) | 679 |
| BcoDI | GTCTC | 2 cut(s) | 1775, 1967 |
| BfaI | CTAG | 8 cut(s) | 398, 402, 570, 702, 941, 1007, 1088, 2046 |
| BfmI | CTRYAG | 1 cut(s) | 1535 |
| BfoI | RGCGCY | 1 cut(s) | 1113 |
| BfuI | GTATCC | 1 cut(s) | 1488 |
| BisI | GCNGC | 5 cut(s) | 445, 506, 1538, 1822, 2288 |
| BlsI | GCNGC | 5 cut(s) | 446, 507, 1539, 1823, 2289 |
| Bme1390I | CCNGG | 5 cut(s) | 679, 1239, 1988, 2619, 2658 |
| Bme18I | GGWCC | 2 cut(s) | 1629, 2615 |
| BmeT110I | CYCGRG | 1 cut(s) | 1658 |
| BmgBI | CACGTC | 1 cut(s) | 2538 |
| BmgT120I | GGNCC | 4 cut(s) | 1429, 1430, 1629, 2615 |
| BmiI | GGNNCC | 6 cut(s) | 45, 676, 1431, 1432, 1631, 2206 |
| BmrFI | CCNGG | 5 cut(s) | 679, 1239, 1988, 2619, 2658 |
| BmsI | GCATC | 3 cut(s) | 259, 328, 2277 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1222 |
| BpiI | GAAGAC | 1 cut(s) | 863 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 409, 441 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1391 |
| Bpu14I | TTCGAA | 1 cut(s) | 2511 |
| BpuEI | CTTGAG | 1 cut(s) | 1354 |
| BpuMI | CCSGG | 1 cut(s) | 679 |
| Bsa29I | ATCGAT | 3 cut(s) | 297, 1551, 1599 |
| BsaAI | YACGTR | 3 cut(s) | 590, 1282, 2370 |
| BsaBI | GATNNNNATC | 1 cut(s) | 624 |
| BsaJI | CCNNGG | 2 cut(s) | 217, 1986 |
| BsaWI | WCCGGW | 1 cut(s) | 1510 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 282, 1426, 1780, 2348 |
| Bse1I | ACTGG | 3 cut(s) | 645, 1361, 1900 |
| Bse3DI | GCAATG | 2 cut(s) | 1038, 2413 |
| Bse8I | GATNNNNATC | 1 cut(s) | 624 |
| BseBI | CCWGG | 4 cut(s) | 1239, 1988, 2619, 2658 |
| BseCI | ATCGAT | 3 cut(s) | 297, 1551, 1599 |
| BseDI | CCNNGG | 2 cut(s) | 217, 1986 |
| BseGI | GGATG | 6 cut(s) | 250, 378, 487, 1519, 1570, 2033 |
| BseJI | GATNNNNATC | 1 cut(s) | 624 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 282, 1426, 1780, 2348 |
| BseMI | GCAATG | 2 cut(s) | 1038, 2413 |
| BseMII | CTCAG | 4 cut(s) | 291, 1382, 1932, 2274 |
| BseNI | ACTGG | 3 cut(s) | 645, 1361, 1900 |
| BseRI | GAGGAG | 2 cut(s) | 140, 1676 |
| BseSI | GKGCMC | 2 cut(s) | 940, 1433 |
| BseXI | GCAGC | 5 cut(s) | 456, 517, 1549, 1808, 2274 |
| BseYI | CCCAGC | 1 cut(s) | 173 |
| BshFI | GGCC | 1 cut(s) | 1431 |
| BshVI | ATCGAT | 3 cut(s) | 297, 1551, 1599 |
| BsiHKAI | GWGCWC | 4 cut(s) | 476, 940, 1287, 2397 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1658 |
| BsiSI | CCGG | 2 cut(s) | 678, 1511 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 282, 1426, 1780, 2348 |
| BsmAI | GTCTC | 2 cut(s) | 1775, 1967 |
| BsmBI | CGTCTC | 1 cut(s) | 1967 |
| BsmI | GAATGC | 4 cut(s) | 556, 802, 1370, 1453 |
| BsnI | GGCC | 1 cut(s) | 1431 |
| BsoBI | CYCGRG | 1 cut(s) | 1658 |
| Bsp119I | TTCGAA | 1 cut(s) | 2511 |
| Bsp120I | GGGCCC | 1 cut(s) | 1429 |
| Bsp1286I | GDGCHC | 5 cut(s) | 476, 940, 1287, 1433, 2397 |
| Bsp1407I | TGTACA | 2 cut(s) | 906, 1682 |
| Bsp143I | GATC | 7 cut(s) | 625, 1122, 1301, 1552, 1600, 2048, 2567 |
| BspACI | CCGC | 3 cut(s) | 92, 2418, 2466 |
| BspANI | GGCC | 1 cut(s) | 1431 |
| BspCNI | CTCAG | 4 cut(s) | 290, 1383, 1931, 2275 |
| BspDI | ATCGAT | 3 cut(s) | 297, 1551, 1599 |
| BspHI | TCATGA | 2 cut(s) | 427, 1267 |
| BspLI | GGNNCC | 6 cut(s) | 45, 676, 1431, 1432, 1631, 2206 |
| BspMAI | CTGCAG | 1 cut(s) | 1539 |
| BspPI | GGATC | 2 cut(s) | 633, 1309 |
| BspT104I | TTCGAA | 1 cut(s) | 2511 |
| BsrDI | GCAATG | 2 cut(s) | 1038, 2413 |
| BsrGI | TGTACA | 2 cut(s) | 906, 1682 |
| BsrI | ACTGG | 3 cut(s) | 645, 1361, 1900 |
| BssECI | CCNNGG | 2 cut(s) | 217, 1986 |
| BssMI | GATC | 7 cut(s) | 625, 1122, 1301, 1552, 1600, 2048, 2567 |
| BssT1I | CCWWGG | 1 cut(s) | 217 |
| Bst2UI | CCWGG | 4 cut(s) | 1239, 1988, 2619, 2658 |
| Bst4CI | ACNGT | 4 cut(s) | 840, 1097, 1754, 2708 |
| Bst6I | CTCTTC | 2 cut(s) | 926, 2508 |
| BstAUI | TGTACA | 2 cut(s) | 906, 1682 |
| BstBAI | YACGTR | 3 cut(s) | 590, 1282, 2370 |
| BstBI | TTCGAA | 1 cut(s) | 2511 |
| BstC8I | GCNNGC | 3 cut(s) | 957, 1114, 2276 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 280, 1424 |
| BstF5I | GGATG | 6 cut(s) | 250, 378, 487, 1519, 1570, 2033 |
| BstH2I | RGCGCY | 1 cut(s) | 1113 |
| BstHHI | GCGC | 1 cut(s) | 1112 |
| BstKTI | GATC | 7 cut(s) | 628, 1125, 1304, 1555, 1603, 2051, 2570 |
| BstMAI | GTCTC | 2 cut(s) | 1775, 1967 |
| BstMBI | GATC | 7 cut(s) | 625, 1122, 1301, 1552, 1600, 2048, 2567 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 170, 1107, 1396, 2042, 2284 |
| BstNI | CCWGG | 4 cut(s) | 1239, 1988, 2619, 2658 |
| BstNSI | RCATGY | 2 cut(s) | 1047, 2527 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1222 |
| BstSCI | CCNGG | 5 cut(s) | 677, 1237, 1986, 2617, 2656 |
| BstSFI | CTRYAG | 1 cut(s) | 1535 |
| BstSLI | GKGCMC | 2 cut(s) | 940, 1433 |
| BstSNI | TACGTA | 1 cut(s) | 590 |
| BstV1I | GCAGC | 5 cut(s) | 456, 517, 1549, 1808, 2274 |
| BstV2I | GAAGAC | 1 cut(s) | 863 |
| Bsu15I | ATCGAT | 3 cut(s) | 297, 1551, 1599 |
| BsuI | GTATCC | 1 cut(s) | 1488 |
| BsuRI | GGCC | 1 cut(s) | 1431 |
| BsuTUI | ATCGAT | 3 cut(s) | 297, 1551, 1599 |
| BtrI | CACGTC | 1 cut(s) | 2538 |
| BtsCI | GGATG | 6 cut(s) | 250, 378, 487, 1519, 1570, 2033 |
| BtsIMutI | CAGTG | 2 cut(s) | 1354, 2001 |
| Cac8I | GCNNGC | 3 cut(s) | 957, 1114, 2276 |
| CciI | TCATGA | 2 cut(s) | 427, 1267 |
| CfoI | GCGC | 1 cut(s) | 1112 |
| Cfr13I | GGNCC | 4 cut(s) | 1429, 1430, 1629, 2615 |
| ClaI | ATCGAT | 3 cut(s) | 297, 1551, 1599 |
| CseI | GACGC | 1 cut(s) | 1885 |
| Csp6I | GTAC | 7 cut(s) | 56, 907, 1683, 2009, 2379, 2557, 2622 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 647, 682 |
| CviQI | GTAC | 7 cut(s) | 56, 907, 1683, 2009, 2379, 2557, 2622 |
| DpnI | GATC | 7 cut(s) | 627, 1124, 1303, 1554, 1602, 2050, 2569 |
| DpnII | GATC | 7 cut(s) | 625, 1122, 1301, 1552, 1600, 2048, 2567 |
| DraI | TTTAAA | 1 cut(s) | 805 |
| Eam1104I | CTCTTC | 2 cut(s) | 926, 2508 |
| EarI | CTCTTC | 2 cut(s) | 926, 2508 |
| Eco105I | TACGTA | 1 cut(s) | 590 |
| Eco130I | CCWWGG | 1 cut(s) | 217 |
| Eco24I | GRGCYC | 1 cut(s) | 1433 |
| Eco32I | GATATC | 1 cut(s) | 1273 |
| Eco47I | GGWCC | 2 cut(s) | 1629, 2615 |
| Eco57I | CTGAAG | 3 cut(s) | 971, 1386, 2165 |
| Eco72I | CACGTG | 1 cut(s) | 1282 |
| Eco88I | CYCGRG | 1 cut(s) | 1658 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 280, 1424 |
| EcoO109I | RGGNCCY | 3 cut(s) | 1429, 1430, 1629 |
| EcoRI | GAATTC | 2 cut(s) | 181, 2421 |
| EcoRII | CCWGG | 4 cut(s) | 1237, 1986, 2617, 2656 |
| EcoRV | GATATC | 1 cut(s) | 1273 |
| EcoT14I | CCWWGG | 1 cut(s) | 217 |
| EcoT22I | ATGCAT | 1 cut(s) | 1182 |
| EcoT38I | GRGCYC | 1 cut(s) | 1433 |
| ErhI | CCWWGG | 1 cut(s) | 217 |
| Esp3I | CGTCTC | 1 cut(s) | 1967 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1013, 1045 |
| FblI | GTMKAC | 2 cut(s) | 1492, 2692 |
| Fnu4HI | GCNGC | 5 cut(s) | 445, 506, 1538, 1822, 2288 |
| FokI | GGATG | 6 cut(s) | 237, 385, 494, 1526, 1577, 2040 |
| FriOI | GRGCYC | 1 cut(s) | 1433 |
| Fsp4HI | GCNGC | 5 cut(s) | 445, 506, 1538, 1822, 2288 |
| FspBI | CTAG | 8 cut(s) | 398, 402, 570, 702, 941, 1007, 1088, 2046 |
| GlaI | GCGC | 1 cut(s) | 1111 |
| GluI | GCNGC | 5 cut(s) | 445, 506, 1538, 1822, 2288 |
| GsaI | CCCAGC | 1 cut(s) | 177 |
| HaeII | RGCGCY | 1 cut(s) | 1113 |
| HaeIII | GGCC | 1 cut(s) | 1431 |
| HapII | CCGG | 2 cut(s) | 678, 1511 |
| HgaI | GACGC | 1 cut(s) | 1885 |
| HhaI | GCGC | 1 cut(s) | 1112 |
| Hin6I | GCGC | 1 cut(s) | 1110 |
| HinP1I | GCGC | 1 cut(s) | 1110 |
| HincII | GTYRAC | 1 cut(s) | 2535 |
| HindII | GTYRAC | 1 cut(s) | 2535 |
| HpaII | CCGG | 2 cut(s) | 678, 1511 |
| HphI | GGTGA | 2 cut(s) | 1547, 2090 |
| Hpy166II | GTNNAC | 7 cut(s) | 412, 587, 938, 1493, 2405, 2535, 2693 |
| Hpy8I | GTNNAC | 7 cut(s) | 412, 587, 938, 1493, 2405, 2535, 2693 |
| Hpy99I | CGWCG | 3 cut(s) | 620, 1879, 2686 |
| HpyCH4III | ACNGT | 4 cut(s) | 840, 1097, 1754, 2708 |
| HpyCH4IV | ACGT | 8 cut(s) | 257, 589, 712, 1281, 1927, 2369, 2537, 2695 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 170, 1107, 1396, 2042, 2284 |
| HpySE526I | ACGT | 8 cut(s) | 257, 589, 712, 1281, 1927, 2369, 2537, 2695 |
| HspAI | GCGC | 1 cut(s) | 1110 |
| Kzo9I | GATC | 7 cut(s) | 625, 1122, 1301, 1552, 1600, 2048, 2567 |
| LmnI | GCTCC | 6 cut(s) | 964, 1069, 1470, 1663, 2183, 2400 |
| Lsp1109I | GCAGC | 5 cut(s) | 456, 517, 1549, 1808, 2274 |
| LweI | GCATC | 3 cut(s) | 259, 328, 2277 |
| MaeI | CTAG | 8 cut(s) | 398, 402, 570, 702, 941, 1007, 1088, 2046 |
| MaeII | ACGT | 8 cut(s) | 257, 589, 712, 1281, 1927, 2369, 2537, 2695 |
| MaeIII | GTNAC | 2 cut(s) | 1607, 2636 |
| MalI | GATC | 7 cut(s) | 627, 1124, 1303, 1554, 1602, 2050, 2569 |
| MboI | GATC | 7 cut(s) | 625, 1122, 1301, 1552, 1600, 2048, 2567 |
| MfeI | CAATTG | 1 cut(s) | 1311 |
| MhlI | GDGCHC | 5 cut(s) | 476, 940, 1287, 1433, 2397 |
| MlyI | GAGTC | 2 cut(s) | 1232, 1777 |
| MmeI | TCCRAC | 6 cut(s) | 271, 773, 798, 1834, 1910, 2664 |
| Mph1103I | ATGCAT | 1 cut(s) | 1182 |
| MroXI | GAANNNNTTC | 3 cut(s) | 298, 1806, 1868 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1379 |
| MspI | CCGG | 2 cut(s) | 678, 1511 |
| MspR9I | CCNGG | 5 cut(s) | 679, 1239, 1988, 2619, 2658 |
| MunI | CAATTG | 1 cut(s) | 1311 |
| Mva1269I | GAATGC | 4 cut(s) | 556, 802, 1370, 1453 |
| MvaI | CCWGG | 4 cut(s) | 1239, 1988, 2619, 2658 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 170, 1107, 1396, 2042, 2284 |
| NciI | CCSGG | 1 cut(s) | 679 |
| NdeII | GATC | 7 cut(s) | 625, 1122, 1301, 1552, 1600, 2048, 2567 |
| NlaIV | GGNNCC | 6 cut(s) | 45, 676, 1431, 1432, 1631, 2206 |
| NsiI | ATGCAT | 1 cut(s) | 1182 |
| NspI | RCATGY | 2 cut(s) | 1047, 2527 |
| NspV | TTCGAA | 1 cut(s) | 2511 |
| PaeR7I | CTCGAG | 1 cut(s) | 1658 |
| PagI | TCATGA | 2 cut(s) | 427, 1267 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 64 |
| PctI | GAATGC | 4 cut(s) | 556, 802, 1370, 1453 |
| PdmI | GAANNNNTTC | 3 cut(s) | 298, 1806, 1868 |
| PfoI | TCCNGGA | 1 cut(s) | 677 |
| PkrI | GCNGC | 5 cut(s) | 446, 507, 1539, 1823, 2289 |
| PleI | GAGTC | 2 cut(s) | 1231, 1776 |
| PmaCI | CACGTG | 1 cut(s) | 1282 |
| PmlI | CACGTG | 1 cut(s) | 1282 |
| PpsI | GAGTC | 2 cut(s) | 1231, 1776 |
| Ppu21I | YACGTR | 3 cut(s) | 590, 1282, 2370 |
| PpuMI | RGGWCCY | 1 cut(s) | 1629 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1222 |
| PshBI | ATTAAT | 1 cut(s) | 2298 |
| Psp1406I | AACGTT | 1 cut(s) | 712 |
| Psp5II | RGGWCCY | 1 cut(s) | 1629 |
| Psp6I | CCWGG | 4 cut(s) | 1237, 1986, 2617, 2656 |
| PspCI | CACGTG | 1 cut(s) | 1282 |
| PspFI | CCCAGC | 1 cut(s) | 173 |
| PspGI | CCWGG | 4 cut(s) | 1237, 1986, 2617, 2656 |
| PspN4I | GGNNCC | 6 cut(s) | 45, 676, 1431, 1432, 1631, 2206 |
| PspOMI | GGGCCC | 1 cut(s) | 1429 |
| PspPI | GGNCC | 4 cut(s) | 1429, 1430, 1629, 2615 |
| PspPPI | RGGWCCY | 1 cut(s) | 1629 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1509, 1541 |
| PstI | CTGCAG | 1 cut(s) | 1539 |
| RsaI | GTAC | 7 cut(s) | 57, 908, 1684, 2010, 2380, 2558, 2623 |
| RsaNI | GTAC | 7 cut(s) | 56, 907, 1683, 2009, 2379, 2557, 2622 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1379 |
| SatI | GCNGC | 5 cut(s) | 445, 506, 1538, 1822, 2288 |
| Sau3AI | GATC | 7 cut(s) | 625, 1122, 1301, 1552, 1600, 2048, 2567 |
| Sau96I | GGNCC | 4 cut(s) | 1429, 1430, 1629, 2615 |
| SchI | GAGTC | 2 cut(s) | 1232, 1777 |
| ScrFI | CCNGG | 5 cut(s) | 679, 1239, 1988, 2619, 2658 |
| SduI | GDGCHC | 5 cut(s) | 476, 940, 1287, 1433, 2397 |
| SfaNI | GCATC | 3 cut(s) | 259, 328, 2277 |
| SfcI | CTRYAG | 1 cut(s) | 1535 |
| Sfr274I | CTCGAG | 1 cut(s) | 1658 |
| SfuI | TTCGAA | 1 cut(s) | 2511 |
| SinI | GGWCC | 2 cut(s) | 1629, 2615 |
| SlaI | CTCGAG | 1 cut(s) | 1658 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1379 |
| SmlI | CTYRAG | 2 cut(s) | 1333, 1658 |
| SmoI | CTYRAG | 2 cut(s) | 1333, 1658 |
| SnaBI | TACGTA | 1 cut(s) | 590 |
| SsiI | CCGC | 3 cut(s) | 92, 2418, 2466 |
| SspMI | CTAG | 8 cut(s) | 398, 402, 570, 702, 941, 1007, 1088, 2046 |
| StyD4I | CCNGG | 5 cut(s) | 677, 1237, 1986, 2617, 2656 |
| StyI | CCWWGG | 1 cut(s) | 217 |
| TaaI | ACNGT | 4 cut(s) | 840, 1097, 1754, 2708 |
| TaiI | ACGT | 8 cut(s) | 260, 592, 715, 1284, 1930, 2372, 2540, 2698 |
| TaqII | GACCGA | 1 cut(s) | 2603 |
| TatI | WGTACW | 3 cut(s) | 906, 1682, 2378 |
| TscAI | CASTG | 2 cut(s) | 1361, 2001 |
| TseI | GCWGC | 5 cut(s) | 444, 505, 1537, 1821, 2287 |
| TspGWI | ACGGA | 3 cut(s) | 1991, 2177, 2514 |
| TspRI | CASTG | 2 cut(s) | 1361, 2001 |
| VneI | GTGCAC | 1 cut(s) | 936 |
| VpaK11BI | GGWCC | 2 cut(s) | 1629, 2615 |
| VspI | ATTAAT | 1 cut(s) | 2298 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 280, 1424 |
| XceI | RCATGY | 2 cut(s) | 1047, 2527 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2049 |
| XhoI | CTCGAG | 1 cut(s) | 1658 |
| XmiI | GTMKAC | 2 cut(s) | 1492, 2692 |
| XmnI | GAANNNNTTC | 3 cut(s) | 298, 1806, 1868 |
| XspI | CTAG | 8 cut(s) | 398, 402, 570, 702, 941, 1007, 1088, 2046 |
| Zsp2I | ATGCAT | 1 cut(s) | 1182 |