TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| C-JID | PF20160 | 69 - 198 | 2.5e-11 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 427 |
| AccII | CGCG | 3 cut(s) | 512, 514, 524 |
| AccIII | TCCGGA | 1 cut(s) | 274 |
| AciI | CCGC | 4 cut(s) | 39, 168, 409, 631 |
| AclWI | GGATC | 2 cut(s) | 285, 329 |
| AcsI | RAATTY | 2 cut(s) | 116, 216 |
| AfaI | GTAC | 2 cut(s) | 129, 581 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 427, 669, 674 |
| AflIII | ACRYGT | 1 cut(s) | 522 |
| AgsI | TTSAA | 8 cut(s) | 19, 50, 106, 116, 239, 371, 595, 628 |
| AjnI | CCWGG | 3 cut(s) | 205, 471, 667 |
| AluBI | AGCT | 3 cut(s) | 268, 486, 702 |
| AluI | AGCT | 3 cut(s) | 268, 486, 702 |
| Alw26I | GTCTC | 1 cut(s) | 94 |
| AlwI | GGATC | 2 cut(s) | 285, 329 |
| Aor13HI | TCCGGA | 1 cut(s) | 274 |
| AoxI | GGCC | 1 cut(s) | 660 |
| ApeKI | GCWGC | 2 cut(s) | 268, 486 |
| ApoI | RAATTY | 2 cut(s) | 116, 216 |
| AspLEI | GCGC | 1 cut(s) | 514 |
| AspS9I | GGNCC | 1 cut(s) | 677 |
| AsuHPI | GGTGA | 1 cut(s) | 182 |
| AvaII | GGWCC | 1 cut(s) | 677 |
| BanII | GRGCYC | 1 cut(s) | 571 |
| BauI | CACGAG | 1 cut(s) | 481 |
| BbvI | GCAGC | 2 cut(s) | 255, 473 |
| BccI | CCATC | 6 cut(s) | 62, 103, 167, 289, 333, 602 |
| BciT130I | CCWGG | 3 cut(s) | 207, 473, 669 |
| BciVI | GTATCC | 1 cut(s) | 469 |
| BcoDI | GTCTC | 1 cut(s) | 94 |
| BfuI | GTATCC | 1 cut(s) | 469 |
| BisI | GCNGC | 2 cut(s) | 269, 487 |
| BlsI | GCNGC | 2 cut(s) | 270, 488 |
| Bme1390I | CCNGG | 3 cut(s) | 207, 473, 669 |
| Bme18I | GGWCC | 1 cut(s) | 677 |
| BmgT120I | GGNCC | 1 cut(s) | 677 |
| BmrFI | CCNGG | 3 cut(s) | 207, 473, 669 |
| BpuEI | CTTGAG | 1 cut(s) | 716 |
| BsaJI | CCNNGG | 1 cut(s) | 668 |
| BsaWI | WCCGGW | 1 cut(s) | 274 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 427, 669, 674 |
| Bse1I | ACTGG | 1 cut(s) | 15 |
| BseAI | TCCGGA | 1 cut(s) | 274 |
| BseBI | CCWGG | 3 cut(s) | 207, 473, 669 |
| BseDI | CCNNGG | 1 cut(s) | 668 |
| BseGI | GGATG | 4 cut(s) | 215, 300, 417, 614 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 427, 669, 674 |
| BseNI | ACTGG | 1 cut(s) | 15 |
| BseRI | GAGGAG | 1 cut(s) | 671 |
| BseXI | GCAGC | 2 cut(s) | 255, 473 |
| Bsh1236I | CGCG | 3 cut(s) | 512, 514, 524 |
| BshFI | GGCC | 1 cut(s) | 662 |
| BsiSI | CCGG | 1 cut(s) | 275 |
| BslFI | GGGAC | 1 cut(s) | 21 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 427, 669, 674 |
| BsmAI | GTCTC | 1 cut(s) | 94 |
| BsmFI | GGGAC | 1 cut(s) | 21 |
| BsnI | GGCC | 1 cut(s) | 662 |
| Bsp1286I | GDGCHC | 1 cut(s) | 571 |
| Bsp13I | TCCGGA | 1 cut(s) | 274 |
| Bsp143I | GATC | 4 cut(s) | 277, 334, 403, 433 |
| BspACI | CCGC | 4 cut(s) | 39, 168, 409, 631 |
| BspANI | GGCC | 1 cut(s) | 662 |
| BspEI | TCCGGA | 1 cut(s) | 274 |
| BspFNI | CGCG | 3 cut(s) | 512, 514, 524 |
| BspHI | TCATGA | 1 cut(s) | 552 |
| BspPI | GGATC | 2 cut(s) | 285, 329 |
| BsrI | ACTGG | 1 cut(s) | 15 |
| BssECI | CCNNGG | 1 cut(s) | 668 |
| BssMI | GATC | 4 cut(s) | 277, 334, 403, 433 |
| BssSI | CACGAG | 1 cut(s) | 481 |
| Bst2BI | CACGAG | 1 cut(s) | 481 |
| Bst2UI | CCWGG | 3 cut(s) | 207, 473, 669 |
| Bst4CI | ACNGT | 1 cut(s) | 262 |
| Bst6I | CTCTTC | 1 cut(s) | 551 |
| BstF5I | GGATG | 4 cut(s) | 215, 300, 417, 614 |
| BstFNI | CGCG | 3 cut(s) | 512, 514, 524 |
| BstHHI | GCGC | 1 cut(s) | 514 |
| BstKTI | GATC | 4 cut(s) | 280, 337, 406, 436 |
| BstMAI | GTCTC | 1 cut(s) | 94 |
| BstMBI | GATC | 4 cut(s) | 277, 334, 403, 433 |
| BstNI | CCWGG | 3 cut(s) | 207, 473, 669 |
| BstSCI | CCNGG | 3 cut(s) | 205, 471, 667 |
| BstUI | CGCG | 3 cut(s) | 512, 514, 524 |
| BstV1I | GCAGC | 2 cut(s) | 255, 473 |
| BstX2I | RGATCY | 1 cut(s) | 334 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 68 |
| BstYI | RGATCY | 1 cut(s) | 334 |
| BsuI | GTATCC | 1 cut(s) | 469 |
| BsuRI | GGCC | 1 cut(s) | 662 |
| BtgZI | GCGATG | 1 cut(s) | 363 |
| BtsCI | GGATG | 4 cut(s) | 215, 300, 417, 614 |
| BtsI | GCAGTG | 1 cut(s) | 88 |
| BtsIMutI | CAGTG | 1 cut(s) | 88 |
| CciI | TCATGA | 1 cut(s) | 552 |
| CfoI | GCGC | 1 cut(s) | 514 |
| Cfr13I | GGNCC | 1 cut(s) | 677 |
| CseI | GACGC | 1 cut(s) | 518 |
| Csp6I | GTAC | 2 cut(s) | 128, 580 |
| CviAII | CATG | 2 cut(s) | 553, 738 |
| CviJI | RGCY | 6 cut(s) | 268, 486, 569, 662, 667, 702 |
| CviKI_1 | RGCY | 6 cut(s) | 268, 486, 569, 662, 667, 702 |
| CviQI | GTAC | 2 cut(s) | 128, 580 |
| DpnI | GATC | 4 cut(s) | 279, 336, 405, 435 |
| DpnII | GATC | 4 cut(s) | 277, 334, 403, 433 |
| DraI | TTTAAA | 1 cut(s) | 724 |
| Eam1104I | CTCTTC | 1 cut(s) | 551 |
| EarI | CTCTTC | 1 cut(s) | 551 |
| Eco24I | GRGCYC | 1 cut(s) | 571 |
| Eco47I | GGWCC | 1 cut(s) | 677 |
| EcoRI | GAATTC | 1 cut(s) | 116 |
| EcoRII | CCWGG | 3 cut(s) | 205, 471, 667 |
| EcoT38I | GRGCYC | 1 cut(s) | 571 |
| FaeI | CATG | 2 cut(s) | 556, 741 |
| FaiI | YATR | 6 cut(s) | 423, 428, 455, 538, 554, 739 |
| FaqI | GGGAC | 1 cut(s) | 21 |
| FatI | CATG | 2 cut(s) | 552, 737 |
| Fnu4HI | GCNGC | 2 cut(s) | 269, 487 |
| FokI | GGATG | 4 cut(s) | 222, 307, 424, 601 |
| FriOI | GRGCYC | 1 cut(s) | 571 |
| Fsp4HI | GCNGC | 2 cut(s) | 269, 487 |
| GlaI | GCGC | 1 cut(s) | 513 |
| GluI | GCNGC | 2 cut(s) | 269, 487 |
| HaeIII | GGCC | 1 cut(s) | 662 |
| HapII | CCGG | 1 cut(s) | 275 |
| HgaI | GACGC | 1 cut(s) | 518 |
| HhaI | GCGC | 1 cut(s) | 514 |
| Hin1II | CATG | 2 cut(s) | 556, 741 |
| Hin6I | GCGC | 1 cut(s) | 512 |
| HinP1I | GCGC | 1 cut(s) | 512 |
| HinfI | GANTC | 8 cut(s) | 46, 251, 284, 388, 634, 650, 713, 729 |
| HpaII | CCGG | 1 cut(s) | 275 |
| HphI | GGTGA | 1 cut(s) | 182 |
| Hpy166II | GTNNAC | 1 cut(s) | 56 |
| Hpy188I | TCNGA | 5 cut(s) | 122, 223, 289, 330, 655 |
| Hpy188III | TCNNGA | 6 cut(s) | 275, 281, 338, 553, 625, 638 |
| Hpy8I | GTNNAC | 1 cut(s) | 56 |
| Hpy99I | CGWCG | 2 cut(s) | 186, 512 |
| HpyAV | CCTTC | 1 cut(s) | 668 |
| HpyCH4III | ACNGT | 1 cut(s) | 262 |
| HpyCH4IV | ACGT | 1 cut(s) | 350 |
| HpyCH4V | TGCA | 2 cut(s) | 686, 692 |
| HpySE526I | ACGT | 1 cut(s) | 350 |
| Hsp92II | CATG | 2 cut(s) | 556, 741 |
| HspAI | GCGC | 1 cut(s) | 512 |
| Kpn2I | TCCGGA | 1 cut(s) | 274 |
| Kzo9I | GATC | 4 cut(s) | 277, 334, 403, 433 |
| LmnI | GCTCC | 1 cut(s) | 265 |
| LpnPI | CCDG | 9 cut(s) | 192, 219, 288, 351, 396, 458, 485, 654, 681 |
| Lsp1109I | GCAGC | 2 cut(s) | 255, 473 |
| MaeII | ACGT | 1 cut(s) | 350 |
| MaeIII | GTNAC | 1 cut(s) | 647 |
| MalI | GATC | 4 cut(s) | 279, 336, 405, 435 |
| MboI | GATC | 4 cut(s) | 277, 334, 403, 433 |
| MboII | GAAGA | 2 cut(s) | 77, 568 |
| MfeI | CAATTG | 2 cut(s) | 687, 693 |
| MflI | RGATCY | 1 cut(s) | 334 |
| MhlI | GDGCHC | 1 cut(s) | 571 |
| MluCI | AATT | 9 cut(s) | 19, 106, 116, 134, 216, 366, 544, 687, 693 |
| MluI | ACGCGT | 1 cut(s) | 522 |
| MlyI | GAGTC | 3 cut(s) | 643, 644, 723 |
| MmeI | TCCRAC | 2 cut(s) | 507, 642 |
| MnlI | CCTC | 7 cut(s) | 238, 282, 468, 552, 611, 649, 652 |
| MroI | TCCGGA | 1 cut(s) | 274 |
| MseI | TTAA | 3 cut(s) | 164, 365, 723 |
| MslI | CAYNNNNRTG | 1 cut(s) | 66 |
| MspI | CCGG | 1 cut(s) | 275 |
| MspR9I | CCNGG | 3 cut(s) | 207, 473, 669 |
| MunI | CAATTG | 2 cut(s) | 687, 693 |
| MvaI | CCWGG | 3 cut(s) | 207, 473, 669 |
| MvnI | CGCG | 3 cut(s) | 512, 514, 524 |
| NdeII | GATC | 4 cut(s) | 277, 334, 403, 433 |
| NlaIII | CATG | 2 cut(s) | 556, 741 |
| NmeAIII | GCCGAG | 1 cut(s) | 688 |
| NmuCI | GTSAC | 1 cut(s) | 647 |
| PagI | TCATGA | 1 cut(s) | 552 |
| PfeI | GAWTC | 5 cut(s) | 46, 251, 284, 388, 713 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 427 |
| PfoI | TCCNGGA | 2 cut(s) | 205, 471 |
| PkrI | GCNGC | 2 cut(s) | 270, 488 |
| PleI | GAGTC | 3 cut(s) | 642, 644, 723 |
| PpsI | GAGTC | 3 cut(s) | 642, 644, 723 |
| Psp6I | CCWGG | 3 cut(s) | 205, 471, 667 |
| PspGI | CCWGG | 3 cut(s) | 205, 471, 667 |
| PspPI | GGNCC | 1 cut(s) | 677 |
| PsuI | RGATCY | 1 cut(s) | 334 |
| RsaI | GTAC | 2 cut(s) | 129, 581 |
| RsaNI | GTAC | 2 cut(s) | 128, 580 |
| RseI | CAYNNNNRTG | 1 cut(s) | 66 |
| SaqAI | TTAA | 3 cut(s) | 164, 365, 723 |
| SatI | GCNGC | 2 cut(s) | 269, 487 |
| Sau3AI | GATC | 4 cut(s) | 277, 334, 403, 433 |
| Sau96I | GGNCC | 1 cut(s) | 677 |
| SchI | GAGTC | 3 cut(s) | 643, 644, 723 |
| ScrFI | CCNGG | 3 cut(s) | 207, 473, 669 |
| SduI | GDGCHC | 1 cut(s) | 571 |
| SetI | ASST | 8 cut(s) | 270, 353, 488, 500, 563, 603, 679, 704 |
| SinI | GGWCC | 1 cut(s) | 677 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 66 |
| SmlI | CTYRAG | 1 cut(s) | 731 |
| SmoI | CTYRAG | 1 cut(s) | 731 |
| Sse9I | AATT | 9 cut(s) | 19, 106, 116, 134, 216, 366, 544, 687, 693 |
| SsiI | CCGC | 4 cut(s) | 39, 168, 409, 631 |
| SspI | AATATT | 1 cut(s) | 644 |
| StyD4I | CCNGG | 3 cut(s) | 205, 471, 667 |
| TaaI | ACNGT | 1 cut(s) | 262 |
| TaiI | ACGT | 1 cut(s) | 353 |
| TaqI | TCGA | 7 cut(s) | 32, 44, 192, 231, 507, 542, 571 |
| TaqII | GACCGA | 1 cut(s) | 174 |
| TasI | AATT | 9 cut(s) | 19, 106, 116, 134, 216, 366, 544, 687, 693 |
| TfiI | GAWTC | 5 cut(s) | 46, 251, 284, 388, 713 |
| Tru1I | TTAA | 3 cut(s) | 164, 365, 723 |
| Tru9I | TTAA | 3 cut(s) | 164, 365, 723 |
| TscAI | CASTG | 1 cut(s) | 88 |
| TseFI | GTSAC | 1 cut(s) | 647 |
| TseI | GCWGC | 2 cut(s) | 268, 486 |
| Tsp45I | GTSAC | 1 cut(s) | 647 |
| TspDTI | ATGAA | 4 cut(s) | 243, 366, 428, 569 |
| TspRI | CASTG | 1 cut(s) | 88 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 427 |
| VpaK11BI | GGWCC | 1 cut(s) | 677 |
| XapI | RAATTY | 2 cut(s) | 116, 216 |