TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 18 - 188 | 2.6e-56 | TIR domain |
| TIR_2 | PF13676 | 21 - 117 | 3e-16 | TIR domain |
| NB-ARC | PF00931 | 202 - 371 | 2.1e-24 | NB-ARC domain |
| NACHT | PF05729 | 222 - 364 | 4.6e-06 | NACHT domain |
| WHD_ROQ1 | PF23282 | 439 - 508 | 2.1e-09 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 790 - 850 | 6.8e-07 | Leucine-rich repeat region |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2273 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 826 |
| AccI | GTMKAC | 2 cut(s) | 1392, 2071 |
| AccII | CGCG | 1 cut(s) | 1566 |
| AccIII | TCCGGA | 1 cut(s) | 2143 |
| AciI | CCGC | 2 cut(s) | 902, 1354 |
| AclWI | GGATC | 3 cut(s) | 338, 351, 936 |
| AcoI | YGGCCR | 1 cut(s) | 462 |
| AcsI | RAATTY | 8 cut(s) | 810, 1191, 1234, 1329, 1736, 2034, 2041, 2147 |
| AcuI | CTGAAG | 4 cut(s) | 402, 468, 1143, 1712 |
| AcyI | GRCGYC | 1 cut(s) | 1199 |
| AdeI | CACNNNGTG | 2 cut(s) | 267, 1034 |
| AfaI | GTAC | 4 cut(s) | 500, 1020, 2288, 2480 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 826 |
| AflII | CTTAAG | 1 cut(s) | 2300 |
| AflIII | ACRYGT | 3 cut(s) | 60, 89, 1426 |
| AhlI | ACTAGT | 2 cut(s) | 1021, 1387 |
| AjiI | CACGTC | 3 cut(s) | 61, 925, 1427 |
| AjnI | CCWGG | 3 cut(s) | 1470, 1537, 2074 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 238, 270, 393, 425, 1226, 1258 |
| AleI | CACNNNNGTG | 1 cut(s) | 2232 |
| Alw21I | GWGCWC | 1 cut(s) | 2229 |
| Alw26I | GTCTC | 4 cut(s) | 352, 473, 563, 2020 |
| AlwI | GGATC | 3 cut(s) | 338, 351, 936 |
| Aor13HI | TCCGGA | 1 cut(s) | 2143 |
| AoxI | GGCC | 2 cut(s) | 462, 1729 |
| ApeKI | GCWGC | 3 cut(s) | 372, 2121, 2281 |
| ApoI | RAATTY | 8 cut(s) | 810, 1191, 1234, 1329, 1736, 2034, 2041, 2147 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2019, 2051 |
| Asp700I | GAANNNNTTC | 6 cut(s) | 387, 598, 840, 1080, 1515, 2387 |
| AspLEI | GCGC | 1 cut(s) | 14 |
| AspS9I | GGNCC | 1 cut(s) | 1730 |
| AsuC2I | CCSGG | 2 cut(s) | 31, 152 |
| AsuHPI | GGTGA | 4 cut(s) | 92, 1847, 2090, 2345 |
| BalI | TGGCCA | 1 cut(s) | 464 |
| BamHI | GGATCC | 1 cut(s) | 343 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1685, 1717 |
| BbsI | GAAGAC | 3 cut(s) | 90, 1166, 1553 |
| Bbv12I | GWGCWC | 1 cut(s) | 2229 |
| BbvI | GCAGC | 3 cut(s) | 384, 2108, 2293 |
| BccI | CCATC | 6 cut(s) | 191, 471, 667, 1298, 1904, 2014 |
| BceAI | ACGGC | 1 cut(s) | 2269 |
| BciT130I | CCWGG | 3 cut(s) | 1472, 1539, 2076 |
| BciVI | GTATCC | 1 cut(s) | 1788 |
| BclI | TGATCA | 1 cut(s) | 1852 |
| BcnI | CCSGG | 2 cut(s) | 31, 152 |
| BcoDI | GTCTC | 4 cut(s) | 352, 473, 563, 2020 |
| BcuI | ACTAGT | 2 cut(s) | 1021, 1387 |
| BfaI | CTAG | 8 cut(s) | 555, 707, 791, 845, 911, 1005, 1022, 1388 |
| BfoI | RGCGCY | 1 cut(s) | 15 |
| BfrI | CTTAAG | 1 cut(s) | 2300 |
| BfuI | GTATCC | 1 cut(s) | 1788 |
| BisI | GCNGC | 3 cut(s) | 373, 2122, 2282 |
| BlsI | GCNGC | 3 cut(s) | 374, 2123, 2283 |
| BmcAI | AGTACT | 1 cut(s) | 2480 |
| Bme1390I | CCNGG | 5 cut(s) | 31, 152, 1472, 1539, 2076 |
| BmgBI | CACGTC | 3 cut(s) | 61, 925, 1427 |
| BmgT120I | GGNCC | 1 cut(s) | 1730 |
| BmiI | GGNNCC | 3 cut(s) | 345, 574, 2364 |
| BmrFI | CCNGG | 5 cut(s) | 31, 152, 1472, 1539, 2076 |
| BmsI | GCATC | 5 cut(s) | 436, 559, 753, 2024, 2327 |
| BpiI | GAAGAC | 3 cut(s) | 90, 1166, 1553 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1915, 1947 |
| BpmI | CTGGAG | 6 cut(s) | 174, 629, 1188, 1206, 1340, 1917 |
| BpuEI | CTTGAG | 7 cut(s) | 1774, 1900, 1942, 1979, 2006, 2222, 2251 |
| BpuMI | CCSGG | 2 cut(s) | 31, 152 |
| Bsa29I | ATCGAT | 1 cut(s) | 1899 |
| BsaAI | YACGTR | 2 cut(s) | 92, 1161 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1659 |
| BsaHI | GRCGYC | 1 cut(s) | 1199 |
| BsaJI | CCNNGG | 3 cut(s) | 30, 76, 784 |
| BsaWI | WCCGGW | 2 cut(s) | 1810, 2143 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 826 |
| Bse118I | RCCGGY | 1 cut(s) | 1356 |
| Bse1I | ACTGG | 3 cut(s) | 465, 702, 948 |
| Bse3DI | GCAATG | 2 cut(s) | 1341, 2010 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1659 |
| BseAI | TCCGGA | 1 cut(s) | 2143 |
| BseBI | CCWGG | 3 cut(s) | 1472, 1539, 2076 |
| BseCI | ATCGAT | 1 cut(s) | 1899 |
| BseDI | CCNNGG | 3 cut(s) | 30, 76, 784 |
| BseGI | GGATG | 6 cut(s) | 482, 550, 678, 1819, 2002, 2006 |
| BseJI | GATNNNNATC | 1 cut(s) | 1659 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 826 |
| BseMI | GCAATG | 2 cut(s) | 1341, 2010 |
| BseMII | CTCAG | 5 cut(s) | 591, 1428, 1754, 1843, 2503 |
| BseNI | ACTGG | 3 cut(s) | 465, 702, 948 |
| BseRI | GAGGAG | 3 cut(s) | 320, 626, 997 |
| BseXI | GCAGC | 3 cut(s) | 384, 2108, 2293 |
| Bsh1236I | CGCG | 1 cut(s) | 1566 |
| Bsh1285I | CGRYCG | 1 cut(s) | 231 |
| BshFI | GGCC | 2 cut(s) | 464, 1731 |
| BshVI | ATCGAT | 1 cut(s) | 1899 |
| BsiEI | CGRYCG | 1 cut(s) | 231 |
| BsiHKAI | GWGCWC | 1 cut(s) | 2229 |
| BsiSI | CCGG | 5 cut(s) | 30, 151, 1357, 1811, 2144 |
| BslFI | GGGAC | 2 cut(s) | 167, 2206 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 826 |
| BsmAI | GTCTC | 4 cut(s) | 352, 473, 563, 2020 |
| BsmFI | GGGAC | 2 cut(s) | 167, 2206 |
| BsmI | GAATGC | 2 cut(s) | 302, 2523 |
| BsnI | GGCC | 2 cut(s) | 464, 1731 |
| Bsp1286I | GDGCHC | 1 cut(s) | 2229 |
| Bsp13I | TCCGGA | 1 cut(s) | 2143 |
| Bsp143I | GATC | 7 cut(s) | 228, 343, 796, 928, 1009, 1852, 1900 |
| Bsp19I | CCATGG | 1 cut(s) | 784 |
| Bsp68I | TCGCGA | 1 cut(s) | 1566 |
| BspACI | CCGC | 2 cut(s) | 902, 1354 |
| BspANI | GGCC | 2 cut(s) | 464, 1731 |
| BspCNI | CTCAG | 5 cut(s) | 590, 1429, 1755, 1842, 2502 |
| BspDI | ATCGAT | 1 cut(s) | 1899 |
| BspEI | TCCGGA | 1 cut(s) | 2143 |
| BspFNI | CGCG | 1 cut(s) | 1566 |
| BspHI | TCATGA | 1 cut(s) | 1972 |
| BspLI | GGNNCC | 3 cut(s) | 345, 574, 2364 |
| BspPI | GGATC | 3 cut(s) | 338, 351, 936 |
| BspQI | GCTCTTC | 2 cut(s) | 1086, 1527 |
| BspTI | CTTAAG | 1 cut(s) | 2300 |
| BsrDI | GCAATG | 2 cut(s) | 1341, 2010 |
| BsrFI | RCCGGY | 1 cut(s) | 1356 |
| BsrI | ACTGG | 3 cut(s) | 465, 702, 948 |
| BssAI | RCCGGY | 1 cut(s) | 1356 |
| BssECI | CCNNGG | 3 cut(s) | 30, 76, 784 |
| BssMI | GATC | 7 cut(s) | 228, 343, 796, 928, 1009, 1852, 1900 |
| BssNI | GRCGYC | 1 cut(s) | 1199 |
| BssT1I | CCWWGG | 1 cut(s) | 784 |
| Bst2UI | CCWGG | 3 cut(s) | 1472, 1539, 2076 |
| Bst4CI | ACNGT | 8 cut(s) | 129, 282, 537, 565, 1143, 1276, 1397, 2423 |
| Bst6I | CTCTTC | 5 cut(s) | 396, 1086, 1527, 1641, 2398 |
| BstACI | GRCGYC | 1 cut(s) | 1199 |
| BstAFI | CTTAAG | 1 cut(s) | 2300 |
| BstBAI | YACGTR | 2 cut(s) | 92, 1161 |
| BstC8I | GCNNGC | 4 cut(s) | 272, 531, 1358, 2521 |
| BstDEI | CTNAG | 8 cut(s) | 285, 577, 603, 1437, 1763, 1829, 1904, 2489 |
| BstDSI | CCRYGG | 1 cut(s) | 784 |
| BstF5I | GGATG | 6 cut(s) | 482, 550, 678, 1819, 2002, 2006 |
| BstFNI | CGCG | 1 cut(s) | 1566 |
| BstH2I | RGCGCY | 1 cut(s) | 15 |
| BstHHI | GCGC | 1 cut(s) | 14 |
| BstKTI | GATC | 7 cut(s) | 231, 346, 799, 931, 1012, 1855, 1903 |
| BstMAI | GTCTC | 4 cut(s) | 352, 473, 563, 2020 |
| BstMBI | GATC | 7 cut(s) | 228, 343, 796, 928, 1009, 1852, 1900 |
| BstMCI | CGRYCG | 1 cut(s) | 231 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 11, 470 |
| BstNI | CCWGG | 3 cut(s) | 1472, 1539, 2076 |
| BstNSI | RCATGY | 1 cut(s) | 1509 |
| BstSCI | CCNGG | 5 cut(s) | 29, 150, 1470, 1537, 2074 |
| BstSNI | TACGTA | 1 cut(s) | 1161 |
| BstUI | CGCG | 1 cut(s) | 1566 |
| BstV1I | GCAGC | 3 cut(s) | 384, 2108, 2293 |
| BstV2I | GAAGAC | 3 cut(s) | 90, 1166, 1553 |
| BstX2I | RGATCY | 1 cut(s) | 343 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1230 |
| BstYI | RGATCY | 1 cut(s) | 343 |
| Bsu15I | ATCGAT | 1 cut(s) | 1899 |
| BsuI | GTATCC | 1 cut(s) | 1788 |
| BsuRI | GGCC | 2 cut(s) | 464, 1731 |
| BsuTUI | ATCGAT | 1 cut(s) | 1899 |
| BtgI | CCRYGG | 1 cut(s) | 784 |
| BtgZI | GCGATG | 1 cut(s) | 2001 |
| BtrI | CACGTC | 3 cut(s) | 61, 925, 1427 |
| BtsCI | GGATG | 6 cut(s) | 482, 550, 678, 1819, 2002, 2006 |
| BtsIMutI | CAGTG | 3 cut(s) | 134, 533, 561 |
| BtuMI | TCGCGA | 1 cut(s) | 1566 |
| Cac8I | GCNNGC | 4 cut(s) | 272, 531, 1358, 2521 |
| CciI | TCATGA | 1 cut(s) | 1972 |
| CfoI | GCGC | 1 cut(s) | 14 |
| Cfr10I | RCCGGY | 1 cut(s) | 1356 |
| Cfr13I | GGNCC | 1 cut(s) | 1730 |
| ClaI | ATCGAT | 1 cut(s) | 1899 |
| CseI | GACGC | 2 cut(s) | 1188, 1554 |
| CsiI | ACCWGGT | 2 cut(s) | 1470, 2074 |
| Csp6I | GTAC | 4 cut(s) | 499, 1019, 2287, 2479 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 518, 553 |
| CviQI | GTAC | 4 cut(s) | 499, 1019, 2287, 2479 |
| DdeI | CTNAG | 8 cut(s) | 285, 577, 603, 1437, 1763, 1829, 1904, 2489 |
| DpnI | GATC | 7 cut(s) | 230, 345, 798, 930, 1011, 1854, 1902 |
| DpnII | GATC | 7 cut(s) | 228, 343, 796, 928, 1009, 1852, 1900 |
| DraI | TTTAAA | 1 cut(s) | 1282 |
| DraIII | CACNNNGTG | 2 cut(s) | 267, 1034 |
| EaeI | YGGCCR | 1 cut(s) | 462 |
| Eam1104I | CTCTTC | 5 cut(s) | 396, 1086, 1527, 1641, 2398 |
| EarI | CTCTTC | 5 cut(s) | 396, 1086, 1527, 1641, 2398 |
| EciI | GGCGGA | 1 cut(s) | 1343 |
| Eco105I | TACGTA | 1 cut(s) | 1161 |
| Eco130I | CCWWGG | 1 cut(s) | 784 |
| Eco57I | CTGAAG | 4 cut(s) | 402, 468, 1143, 1712 |
| EcoRI | GAATTC | 1 cut(s) | 1234 |
| EcoRII | CCWGG | 3 cut(s) | 1470, 1537, 2074 |
| EcoT14I | CCWWGG | 1 cut(s) | 784 |
| EcoT22I | ATGCAT | 1 cut(s) | 302 |
| ErhI | CCWWGG | 1 cut(s) | 784 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 891, 923, 2427, 2459 |
| FaqI | GGGAC | 2 cut(s) | 167, 2206 |
| FauNDI | CATATG | 1 cut(s) | 1048 |
| FbaI | TGATCA | 1 cut(s) | 1852 |
| FblI | GTMKAC | 2 cut(s) | 1392, 2071 |
| Fnu4HI | GCNGC | 3 cut(s) | 373, 2122, 2282 |
| FokI | GGATG | 6 cut(s) | 489, 537, 685, 1826, 1989, 1993 |
| Fsp4HI | GCNGC | 3 cut(s) | 373, 2122, 2282 |
| FspBI | CTAG | 8 cut(s) | 555, 707, 791, 845, 911, 1005, 1022, 1388 |
| GlaI | GCGC | 1 cut(s) | 13 |
| GluI | GCNGC | 3 cut(s) | 373, 2122, 2282 |
| GsuI | CTGGAG | 6 cut(s) | 174, 629, 1188, 1206, 1340, 1917 |
| HaeII | RGCGCY | 1 cut(s) | 15 |
| HaeIII | GGCC | 2 cut(s) | 464, 1731 |
| HapII | CCGG | 5 cut(s) | 30, 151, 1357, 1811, 2144 |
| HgaI | GACGC | 2 cut(s) | 1188, 1554 |
| HhaI | GCGC | 1 cut(s) | 14 |
| Hin1I | GRCGYC | 1 cut(s) | 1199 |
| Hin6I | GCGC | 1 cut(s) | 12 |
| HinP1I | GCGC | 1 cut(s) | 12 |
| HpaII | CCGG | 5 cut(s) | 30, 151, 1357, 1811, 2144 |
| HphI | GGTGA | 4 cut(s) | 92, 1847, 2090, 2345 |
| Hpy166II | GTNNAC | 7 cut(s) | 712, 1019, 1118, 1393, 1544, 1688, 2072 |
| Hpy8I | GTNNAC | 7 cut(s) | 712, 1019, 1118, 1393, 1544, 1688, 2072 |
| Hpy99I | CGWCG | 2 cut(s) | 62, 1571 |
| HpyCH4III | ACNGT | 8 cut(s) | 129, 282, 537, 565, 1143, 1276, 1397, 2423 |
| HpyCH4IV | ACGT | 6 cut(s) | 60, 91, 924, 1160, 1426, 2549 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 11, 470 |
| HpyF3I | CTNAG | 8 cut(s) | 285, 577, 603, 1437, 1763, 1829, 1904, 2489 |
| HpySE526I | ACGT | 6 cut(s) | 60, 91, 924, 1160, 1426, 2549 |
| Hsp92I | GRCGYC | 1 cut(s) | 1199 |
| HspAI | GCGC | 1 cut(s) | 12 |
| Kpn2I | TCCGGA | 1 cut(s) | 2143 |
| KroI | GCCGGC | 1 cut(s) | 1356 |
| KroNI | GCCGGC | 1 cut(s) | 1358 |
| Ksp22I | TGATCA | 1 cut(s) | 1852 |
| Kzo9I | GATC | 7 cut(s) | 228, 343, 796, 928, 1009, 1852, 1900 |
| LguI | GCTCTTC | 2 cut(s) | 1086, 1527 |
| LmnI | GCTCC | 2 cut(s) | 540, 2248 |
| Lsp1109I | GCAGC | 3 cut(s) | 384, 2108, 2293 |
| LweI | GCATC | 5 cut(s) | 436, 559, 753, 2024, 2327 |
| MabI | ACCWGGT | 2 cut(s) | 1470, 2074 |
| MaeI | CTAG | 8 cut(s) | 555, 707, 791, 845, 911, 1005, 1022, 1388 |
| MaeII | ACGT | 6 cut(s) | 60, 91, 924, 1160, 1426, 2549 |
| MaeIII | GTNAC | 4 cut(s) | 123, 1024, 1156, 1907 |
| MalI | GATC | 7 cut(s) | 230, 345, 798, 930, 1011, 1854, 1902 |
| MboI | GATC | 7 cut(s) | 228, 343, 796, 928, 1009, 1852, 1900 |
| MfeI | CAATTG | 2 cut(s) | 207, 2220 |
| MflI | RGATCY | 1 cut(s) | 343 |
| MhlI | GDGCHC | 1 cut(s) | 2229 |
| MlsI | TGGCCA | 1 cut(s) | 464 |
| MluNI | TGGCCA | 1 cut(s) | 464 |
| MlyI | GAGTC | 4 cut(s) | 1924, 2022, 2077, 2356 |
| MmeI | TCCRAC | 2 cut(s) | 1076, 1748 |
| Mox20I | TGGCCA | 1 cut(s) | 464 |
| Mph1103I | ATGCAT | 1 cut(s) | 302 |
| MroI | TCCGGA | 1 cut(s) | 2143 |
| MroNI | GCCGGC | 1 cut(s) | 1356 |
| MroXI | GAANNNNTTC | 6 cut(s) | 387, 598, 840, 1080, 1515, 2387 |
| MscI | TGGCCA | 1 cut(s) | 464 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1635, 2232 |
| Msp20I | TGGCCA | 1 cut(s) | 464 |
| MspCI | CTTAAG | 1 cut(s) | 2300 |
| MspI | CCGG | 5 cut(s) | 30, 151, 1357, 1811, 2144 |
| MspR9I | CCNGG | 5 cut(s) | 31, 152, 1472, 1539, 2076 |
| MunI | CAATTG | 2 cut(s) | 207, 2220 |
| Mva1269I | GAATGC | 2 cut(s) | 302, 2523 |
| MvaI | CCWGG | 3 cut(s) | 1472, 1539, 2076 |
| MvnI | CGCG | 1 cut(s) | 1566 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 11, 470 |
| NaeI | GCCGGC | 1 cut(s) | 1358 |
| NciI | CCSGG | 2 cut(s) | 31, 152 |
| NcoI | CCATGG | 1 cut(s) | 784 |
| NdeI | CATATG | 1 cut(s) | 1048 |
| NdeII | GATC | 7 cut(s) | 228, 343, 796, 928, 1009, 1852, 1900 |
| NgoMIV | GCCGGC | 1 cut(s) | 1356 |
| NlaIV | GGNNCC | 3 cut(s) | 345, 574, 2364 |
| NmuCI | GTSAC | 1 cut(s) | 1024 |
| NruI | TCGCGA | 1 cut(s) | 1566 |
| NsiI | ATGCAT | 1 cut(s) | 302 |
| NspI | RCATGY | 1 cut(s) | 1509 |
| OliI | CACNNNNGTG | 1 cut(s) | 2232 |
| PagI | TCATGA | 1 cut(s) | 1972 |
| PciSI | GCTCTTC | 2 cut(s) | 1086, 1527 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 224 |
| PctI | GAATGC | 2 cut(s) | 302, 2523 |
| PdiI | GCCGGC | 1 cut(s) | 1358 |
| PdmI | GAANNNNTTC | 6 cut(s) | 387, 598, 840, 1080, 1515, 2387 |
| PfeI | GAWTC | 7 cut(s) | 289, 599, 990, 1660, 1969, 1999, 2140 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 826 |
| PfoI | TCCNGGA | 1 cut(s) | 150 |
| PkrI | GCNGC | 3 cut(s) | 374, 2123, 2283 |
| Ple19I | CGATCG | 1 cut(s) | 231 |
| PleI | GAGTC | 4 cut(s) | 1924, 2022, 2076, 2355 |
| PpsI | GAGTC | 4 cut(s) | 1924, 2022, 2076, 2355 |
| Ppu21I | YACGTR | 2 cut(s) | 92, 1161 |
| PsiI | TTATAA | 1 cut(s) | 2273 |
| Psp6I | CCWGG | 3 cut(s) | 1470, 1537, 2074 |
| PspGI | CCWGG | 3 cut(s) | 1470, 1537, 2074 |
| PspN4I | GGNNCC | 3 cut(s) | 345, 574, 2364 |
| PspPI | GGNCC | 1 cut(s) | 1730 |
| PsuI | RGATCY | 1 cut(s) | 343 |
| PvuI | CGATCG | 1 cut(s) | 231 |
| RruI | TCGCGA | 1 cut(s) | 1566 |
| RsaI | GTAC | 4 cut(s) | 500, 1020, 2288, 2480 |
| RsaNI | GTAC | 4 cut(s) | 499, 1019, 2287, 2479 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1635, 2232 |
| SapI | GCTCTTC | 2 cut(s) | 1086, 1527 |
| SatI | GCNGC | 3 cut(s) | 373, 2122, 2282 |
| Sau3AI | GATC | 7 cut(s) | 228, 343, 796, 928, 1009, 1852, 1900 |
| Sau96I | GGNCC | 1 cut(s) | 1730 |
| ScaI | AGTACT | 1 cut(s) | 2480 |
| SchI | GAGTC | 4 cut(s) | 1924, 2022, 2077, 2356 |
| ScrFI | CCNGG | 5 cut(s) | 31, 152, 1472, 1539, 2076 |
| SduI | GDGCHC | 1 cut(s) | 2229 |
| SexAI | ACCWGGT | 2 cut(s) | 1470, 2074 |
| SfaNI | GCATC | 5 cut(s) | 436, 559, 753, 2024, 2327 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1635, 2232 |
| SmlI | CTYRAG | 8 cut(s) | 1753, 1879, 1921, 1958, 2021, 2201, 2230, 2300 |
| SmoI | CTYRAG | 8 cut(s) | 1753, 1879, 1921, 1958, 2021, 2201, 2230, 2300 |
| SnaBI | TACGTA | 1 cut(s) | 1161 |
| SpeI | ACTAGT | 2 cut(s) | 1021, 1387 |
| SsiI | CCGC | 2 cut(s) | 902, 1354 |
| SspI | AATATT | 2 cut(s) | 1287, 1849 |
| SspMI | CTAG | 8 cut(s) | 555, 707, 791, 845, 911, 1005, 1022, 1388 |
| StyD4I | CCNGG | 5 cut(s) | 29, 150, 1470, 1537, 2074 |
| StyI | CCWWGG | 1 cut(s) | 784 |
| TaaI | ACNGT | 8 cut(s) | 129, 282, 537, 565, 1143, 1276, 1397, 2423 |
| TaiI | ACGT | 6 cut(s) | 63, 94, 927, 1163, 1429, 2552 |
| TaqI | TCGA | 2 cut(s) | 218, 1899 |
| TatI | WGTACW | 2 cut(s) | 1018, 2478 |
| TfiI | GAWTC | 7 cut(s) | 289, 599, 990, 1660, 1969, 1999, 2140 |
| TscAI | CASTG | 3 cut(s) | 134, 540, 568 |
| TseFI | GTSAC | 1 cut(s) | 1024 |
| TseI | GCWGC | 3 cut(s) | 372, 2121, 2281 |
| Tsp45I | GTSAC | 1 cut(s) | 1024 |
| TspGWI | ACGGA | 2 cut(s) | 1167, 2417 |
| TspRI | CASTG | 3 cut(s) | 134, 540, 568 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 826 |
| Vha464I | CTTAAG | 1 cut(s) | 2300 |
| XapI | RAATTY | 8 cut(s) | 810, 1191, 1234, 1329, 1736, 2034, 2041, 2147 |
| XceI | RCATGY | 1 cut(s) | 1509 |
| XmiI | GTMKAC | 2 cut(s) | 1392, 2071 |
| XmnI | GAANNNNTTC | 6 cut(s) | 387, 598, 840, 1080, 1515, 2387 |
| XspI | CTAG | 8 cut(s) | 555, 707, 791, 845, 911, 1005, 1022, 1388 |
| ZrmI | AGTACT | 1 cut(s) | 2480 |
| Zsp2I | ATGCAT | 1 cut(s) | 302 |