TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| NB-ARC | PF00931 | 1 - 146 | 1.4e-19 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 215 - 281 | 3.4e-13 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 415 - 527 | 1.2e-06 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 556 - 622 | 4.9e-07 | Leucine-rich repeat region |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2288 |
| AccBSI | CCGCTC | 1 cut(s) | 2175 |
| AccI | GTMKAC | 1 cut(s) | 2056 |
| AciI | CCGC | 2 cut(s) | 2175, 2725 |
| AclWI | GGATC | 3 cut(s) | 313, 1204, 2660 |
| AcsI | RAATTY | 7 cut(s) | 731, 1148, 1972, 2132, 2403, 2626, 2645 |
| AcuI | CTGAAG | 5 cut(s) | 58, 402, 1140, 1697, 2014 |
| AcvI | CACGTG | 1 cut(s) | 264 |
| AdeI | CACNNNGTG | 1 cut(s) | 267 |
| AfaI | GTAC | 3 cut(s) | 534, 840, 1969 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 2288, 2436 |
| AflII | CTTAAG | 2 cut(s) | 2015, 2434 |
| AflIII | ACRYGT | 1 cut(s) | 60 |
| AgeI | ACCGGT | 2 cut(s) | 32, 1795 |
| AjiI | CACGTC | 2 cut(s) | 61, 2618 |
| AjnI | CCWGG | 3 cut(s) | 218, 1522, 1783 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 238, 270, 393, 425, 2210, 2242 |
| Alw21I | GWGCWC | 3 cut(s) | 14, 198, 2214 |
| Alw26I | GTCTC | 6 cut(s) | 352, 354, 1518, 2005, 2743, 2767 |
| AlwI | GGATC | 3 cut(s) | 313, 1204, 2660 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 811, 2037 |
| Ama87I | CYCGRG | 1 cut(s) | 1002 |
| AoxI | GGCC | 1 cut(s) | 1714 |
| ApeKI | GCWGC | 2 cut(s) | 1681, 2106 |
| ApoI | RAATTY | 7 cut(s) | 731, 1148, 1972, 2132, 2403, 2626, 2645 |
| AsiGI | ACCGGT | 2 cut(s) | 32, 1795 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 98, 1500 |
| AspS9I | GGNCC | 2 cut(s) | 1715, 1914 |
| AsuC2I | CCSGG | 2 cut(s) | 91, 1919 |
| AsuHPI | GGTGA | 2 cut(s) | 30, 2405 |
| AvaI | CYCGRG | 1 cut(s) | 1002 |
| AvaII | GGWCC | 1 cut(s) | 1914 |
| BanII | GRGCYC | 1 cut(s) | 198 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1670, 1702 |
| BbrPI | CACGTG | 1 cut(s) | 264 |
| BbsI | GAAGAC | 2 cut(s) | 90, 1163 |
| Bbv12I | GWGCWC | 3 cut(s) | 14, 198, 2214 |
| BbvI | GCAGC | 2 cut(s) | 1668, 2093 |
| BccI | CCATC | 7 cut(s) | 667, 1295, 1309, 1350, 1999, 2290, 2566 |
| BciT130I | CCWGG | 3 cut(s) | 220, 1524, 1785 |
| BcnI | CCSGG | 2 cut(s) | 91, 1919 |
| BcoDI | GTCTC | 6 cut(s) | 352, 354, 1518, 2005, 2743, 2767 |
| BfaI | CTAG | 6 cut(s) | 702, 788, 908, 1628, 2658, 2697 |
| BfmI | CTRYAG | 1 cut(s) | 1407 |
| BfrI | CTTAAG | 2 cut(s) | 2015, 2434 |
| BglII | AGATCT | 1 cut(s) | 1427 |
| BisI | GCNGC | 2 cut(s) | 1682, 2107 |
| BlsI | GCNGC | 2 cut(s) | 1683, 2108 |
| BmcAI | AGTACT | 1 cut(s) | 534 |
| Bme1390I | CCNGG | 5 cut(s) | 91, 220, 1524, 1785, 1919 |
| Bme18I | GGWCC | 1 cut(s) | 1914 |
| BmeT110I | CYCGRG | 1 cut(s) | 1002 |
| BmgBI | CACGTC | 2 cut(s) | 61, 2618 |
| BmgT120I | GGNCC | 2 cut(s) | 1715, 1914 |
| BmiI | GGNNCC | 5 cut(s) | 345, 574, 1646, 1717, 1916 |
| BmrFI | CCNGG | 5 cut(s) | 91, 220, 1524, 1785, 1919 |
| BmsI | GCATC | 6 cut(s) | 192, 436, 559, 2493, 2516, 2670 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2592 |
| BpiI | GAAGAC | 2 cut(s) | 90, 1163 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 185, 217 |
| BpmI | CTGGAG | 3 cut(s) | 174, 1185, 1774 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1177 |
| BpuEI | CTTGAG | 7 cut(s) | 1500, 1759, 1964, 1991, 2692, 2753, 2777 |
| BpuMI | CCSGG | 2 cut(s) | 91, 1919 |
| Bsa29I | ATCGAT | 1 cut(s) | 1884 |
| BsaAI | YACGTR | 1 cut(s) | 264 |
| BsaBI | GATNNNNATC | 2 cut(s) | 924, 2281 |
| BsaI | GGTCTC | 2 cut(s) | 2743, 2767 |
| BsaJI | CCNNGG | 3 cut(s) | 47, 781, 1917 |
| BsaWI | WCCGGW | 2 cut(s) | 32, 1795 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 2288, 2436 |
| Bse118I | RCCGGY | 2 cut(s) | 32, 1795 |
| Bse1I | ACTGG | 5 cut(s) | 612, 945, 971, 1245, 1757 |
| Bse3DI | GCAATG | 2 cut(s) | 1338, 1995 |
| Bse8I | GATNNNNATC | 2 cut(s) | 924, 2281 |
| BseBI | CCWGG | 3 cut(s) | 220, 1524, 1785 |
| BseCI | ATCGAT | 1 cut(s) | 1884 |
| BseDI | CCNNGG | 3 cut(s) | 47, 781, 1917 |
| BseGI | GGATG | 8 cut(s) | 550, 678, 856, 1281, 1496, 1987, 1991, 2484 |
| BseJI | GATNNNNATC | 2 cut(s) | 924, 2281 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 2288, 2436 |
| BseMI | GCAATG | 2 cut(s) | 1338, 1995 |
| BseMII | CTCAG | 3 cut(s) | 216, 591, 2287 |
| BseNI | ACTGG | 5 cut(s) | 612, 945, 971, 1245, 1757 |
| BseRI | GAGGAG | 2 cut(s) | 188, 994 |
| BseXI | GCAGC | 2 cut(s) | 1668, 2093 |
| BsgI | GTGCAG | 1 cut(s) | 2653 |
| Bsh1285I | CGRYCG | 1 cut(s) | 231 |
| BshFI | GGCC | 1 cut(s) | 1716 |
| BshTI | ACCGGT | 2 cut(s) | 32, 1795 |
| BshVI | ATCGAT | 1 cut(s) | 1884 |
| BsiEI | CGRYCG | 1 cut(s) | 231 |
| BsiHKAI | GWGCWC | 3 cut(s) | 14, 198, 2214 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1002 |
| BsiSI | CCGG | 4 cut(s) | 33, 91, 1796, 1919 |
| BslFI | GGGAC | 5 cut(s) | 167, 328, 799, 2191, 2295 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 2288, 2436 |
| BsmAI | GTCTC | 6 cut(s) | 352, 354, 1518, 2005, 2743, 2767 |
| BsmBI | CGTCTC | 1 cut(s) | 354 |
| BsmFI | GGGAC | 5 cut(s) | 167, 328, 799, 2191, 2295 |
| BsmI | GAATGC | 2 cut(s) | 302, 1938 |
| BsnI | GGCC | 1 cut(s) | 1716 |
| Bso31I | GGTCTC | 2 cut(s) | 2743, 2767 |
| BsoBI | CYCGRG | 1 cut(s) | 1002 |
| Bsp1286I | GDGCHC | 3 cut(s) | 14, 198, 2214 |
| Bsp1407I | TGTACA | 1 cut(s) | 1967 |
| Bsp143I | GATC | 9 cut(s) | 228, 318, 925, 1006, 1196, 1427, 1885, 2636, 2652 |
| Bsp19I | CCATGG | 2 cut(s) | 47, 781 |
| BspACI | CCGC | 2 cut(s) | 2175, 2725 |
| BspANI | GGCC | 1 cut(s) | 1716 |
| BspCNI | CTCAG | 3 cut(s) | 215, 590, 2286 |
| BspDI | ATCGAT | 1 cut(s) | 1884 |
| BspLI | GGNNCC | 5 cut(s) | 345, 574, 1646, 1717, 1916 |
| BspPI | GGATC | 3 cut(s) | 313, 1204, 2660 |
| BspTI | CTTAAG | 2 cut(s) | 2015, 2434 |
| BspTNI | GGTCTC | 2 cut(s) | 2743, 2767 |
| BsrBI | CCGCTC | 1 cut(s) | 2175 |
| BsrDI | GCAATG | 2 cut(s) | 1338, 1995 |
| BsrFI | RCCGGY | 2 cut(s) | 32, 1795 |
| BsrGI | TGTACA | 1 cut(s) | 1967 |
| BsrI | ACTGG | 5 cut(s) | 612, 945, 971, 1245, 1757 |
| BssAI | RCCGGY | 2 cut(s) | 32, 1795 |
| BssECI | CCNNGG | 3 cut(s) | 47, 781, 1917 |
| BssMI | GATC | 9 cut(s) | 228, 318, 925, 1006, 1196, 1427, 1885, 2636, 2652 |
| BssT1I | CCWWGG | 2 cut(s) | 47, 781 |
| Bst2UI | CCWGG | 3 cut(s) | 220, 1524, 1785 |
| Bst4CI | ACNGT | 6 cut(s) | 216, 282, 348, 565, 1382, 2384 |
| Bst6I | CTCTTC | 5 cut(s) | 300, 396, 429, 1626, 2357 |
| BstAFI | CTTAAG | 2 cut(s) | 2015, 2434 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2667 |
| BstAUI | TGTACA | 1 cut(s) | 1967 |
| BstBAI | YACGTR | 1 cut(s) | 264 |
| BstC8I | GCNNGC | 3 cut(s) | 1345, 1714, 2482 |
| BstDEI | CTNAG | 8 cut(s) | 202, 577, 628, 1143, 1177, 1814, 1889, 2273 |
| BstDSI | CCRYGG | 2 cut(s) | 47, 781 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2434 |
| BstF5I | GGATG | 8 cut(s) | 550, 678, 856, 1281, 1496, 1987, 1991, 2484 |
| BstKTI | GATC | 9 cut(s) | 231, 321, 928, 1009, 1199, 1430, 1888, 2639, 2655 |
| BstMAI | GTCTC | 6 cut(s) | 352, 354, 1518, 2005, 2743, 2767 |
| BstMBI | GATC | 9 cut(s) | 228, 318, 925, 1006, 1196, 1427, 1885, 2636, 2652 |
| BstMCI | CGRYCG | 1 cut(s) | 231 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 78, 2667 |
| BstNI | CCWGG | 3 cut(s) | 220, 1524, 1785 |
| BstNSI | RCATGY | 1 cut(s) | 183 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2592 |
| BstSCI | CCNGG | 5 cut(s) | 89, 218, 1522, 1783, 1917 |
| BstSFI | CTRYAG | 1 cut(s) | 1407 |
| BstV1I | GCAGC | 2 cut(s) | 1668, 2093 |
| BstV2I | GAAGAC | 2 cut(s) | 90, 1163 |
| BstX2I | RGATCY | 3 cut(s) | 1196, 1427, 2652 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1227 |
| BstYI | RGATCY | 3 cut(s) | 1196, 1427, 2652 |
| Bsu15I | ATCGAT | 1 cut(s) | 1884 |
| BsuRI | GGCC | 1 cut(s) | 1716 |
| BsuTUI | ATCGAT | 1 cut(s) | 1884 |
| BtgI | CCRYGG | 2 cut(s) | 47, 781 |
| BtrI | CACGTC | 2 cut(s) | 61, 2618 |
| BtsCI | GGATG | 8 cut(s) | 550, 678, 856, 1281, 1496, 1987, 1991, 2484 |
| BtsI | GCAGTG | 1 cut(s) | 134 |
| BtsIMutI | CAGTG | 2 cut(s) | 134, 2521 |
| Cac8I | GCNNGC | 3 cut(s) | 1345, 1714, 2482 |
| CaiI | CAGNNNCTG | 2 cut(s) | 811, 2037 |
| Cfr10I | RCCGGY | 2 cut(s) | 32, 1795 |
| Cfr13I | GGNCC | 2 cut(s) | 1715, 1914 |
| ClaI | ATCGAT | 1 cut(s) | 1884 |
| CseI | GACGC | 1 cut(s) | 1539 |
| CsiI | ACCWGGT | 1 cut(s) | 1783 |
| Csp6I | GTAC | 3 cut(s) | 533, 839, 1968 |
| CspAI | ACCGGT | 2 cut(s) | 32, 1795 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2610, 2645 |
| CviAII | CATG | 8 cut(s) | 48, 180, 301, 353, 398, 782, 1028, 1469 |
| CviQI | GTAC | 3 cut(s) | 533, 839, 1968 |
| DdeI | CTNAG | 8 cut(s) | 202, 577, 628, 1143, 1177, 1814, 1889, 2273 |
| DpnI | GATC | 9 cut(s) | 230, 320, 927, 1008, 1198, 1429, 1887, 2638, 2654 |
| DpnII | GATC | 9 cut(s) | 228, 318, 925, 1006, 1196, 1427, 1885, 2636, 2652 |
| DraIII | CACNNNGTG | 1 cut(s) | 267 |
| Eam1104I | CTCTTC | 5 cut(s) | 300, 396, 429, 1626, 2357 |
| EarI | CTCTTC | 5 cut(s) | 300, 396, 429, 1626, 2357 |
| Ecl136II | GAGCTC | 1 cut(s) | 196 |
| Eco130I | CCWWGG | 2 cut(s) | 47, 781 |
| Eco24I | GRGCYC | 1 cut(s) | 198 |
| Eco31I | GGTCTC | 2 cut(s) | 2743, 2767 |
| Eco47I | GGWCC | 1 cut(s) | 1914 |
| Eco53kI | GAGCTC | 1 cut(s) | 196 |
| Eco57I | CTGAAG | 5 cut(s) | 58, 402, 1140, 1697, 2014 |
| Eco72I | CACGTG | 1 cut(s) | 264 |
| Eco88I | CYCGRG | 1 cut(s) | 1002 |
| EcoICRI | GAGCTC | 1 cut(s) | 196 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2434 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1914 |
| EcoRII | CCWGG | 3 cut(s) | 218, 1522, 1783 |
| EcoT14I | CCWWGG | 2 cut(s) | 47, 781 |
| EcoT22I | ATGCAT | 3 cut(s) | 185, 302, 1470 |
| EcoT38I | GRGCYC | 1 cut(s) | 198 |
| ErhI | CCWWGG | 2 cut(s) | 47, 781 |
| Esp3I | CGTCTC | 1 cut(s) | 354 |
| FaeI | CATG | 8 cut(s) | 51, 183, 304, 356, 401, 785, 1031, 1472 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 888, 920 |
| FaqI | GGGAC | 5 cut(s) | 167, 328, 799, 2191, 2295 |
| FatI | CATG | 8 cut(s) | 47, 179, 300, 352, 397, 781, 1027, 1468 |
| FauI | CCCGC | 1 cut(s) | 2168 |
| FauNDI | CATATG | 1 cut(s) | 1045 |
| FblI | GTMKAC | 1 cut(s) | 2056 |
| Fnu4HI | GCNGC | 2 cut(s) | 1682, 2107 |
| FokI | GGATG | 8 cut(s) | 537, 685, 863, 1268, 1503, 1974, 1978, 2471 |
| FriOI | GRGCYC | 1 cut(s) | 198 |
| Fsp4HI | GCNGC | 2 cut(s) | 1682, 2107 |
| FspBI | CTAG | 6 cut(s) | 702, 788, 908, 1628, 2658, 2697 |
| GluI | GCNGC | 2 cut(s) | 1682, 2107 |
| GsuI | CTGGAG | 3 cut(s) | 174, 1185, 1774 |
| HaeIII | GGCC | 1 cut(s) | 1716 |
| HapII | CCGG | 4 cut(s) | 33, 91, 1796, 1919 |
| HgaI | GACGC | 1 cut(s) | 1539 |
| Hin1II | CATG | 8 cut(s) | 51, 183, 304, 356, 401, 785, 1031, 1472 |
| HindIII | AAGCTT | 2 cut(s) | 1074, 2162 |
| HpaII | CCGG | 4 cut(s) | 33, 91, 1796, 1919 |
| HphI | GGTGA | 2 cut(s) | 30, 2405 |
| Hpy166II | GTNNAC | 4 cut(s) | 38, 1673, 2057, 2621 |
| Hpy8I | GTNNAC | 4 cut(s) | 38, 1673, 2057, 2621 |
| Hpy99I | CGWCG | 1 cut(s) | 62 |
| HpyAV | CCTTC | 9 cut(s) | 88, 1048, 1595, 1666, 1736, 1776, 1955, 2390, 2607 |
| HpyCH4III | ACNGT | 6 cut(s) | 216, 282, 348, 565, 1382, 2384 |
| HpyCH4IV | ACGT | 4 cut(s) | 60, 263, 837, 2617 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 78, 2667 |
| HpyF3I | CTNAG | 8 cut(s) | 202, 577, 628, 1143, 1177, 1814, 1889, 2273 |
| HpySE526I | ACGT | 4 cut(s) | 60, 263, 837, 2617 |
| Hsp92II | CATG | 8 cut(s) | 51, 183, 304, 356, 401, 785, 1031, 1472 |
| Kzo9I | GATC | 9 cut(s) | 228, 318, 925, 1006, 1196, 1427, 1885, 2636, 2652 |
| LmnI | GCTCC | 4 cut(s) | 201, 540, 2209, 2233 |
| Lsp1109I | GCAGC | 2 cut(s) | 1668, 2093 |
| LweI | GCATC | 6 cut(s) | 192, 436, 559, 2493, 2516, 2670 |
| MabI | ACCWGGT | 1 cut(s) | 1783 |
| MaeI | CTAG | 6 cut(s) | 702, 788, 908, 1628, 2658, 2697 |
| MaeII | ACGT | 4 cut(s) | 60, 263, 837, 2617 |
| MaeIII | GTNAC | 3 cut(s) | 559, 2467, 2699 |
| MalI | GATC | 9 cut(s) | 230, 320, 927, 1008, 1198, 1429, 1887, 2638, 2654 |
| MbiI | CCGCTC | 1 cut(s) | 2175 |
| MboI | GATC | 9 cut(s) | 228, 318, 925, 1006, 1196, 1427, 1885, 2636, 2652 |
| MfeI | CAATTG | 2 cut(s) | 2590, 2665 |
| MflI | RGATCY | 3 cut(s) | 1196, 1427, 2652 |
| MhlI | GDGCHC | 3 cut(s) | 14, 198, 2214 |
| MlyI | GAGTC | 3 cut(s) | 1520, 2062, 2317 |
| MmeI | TCCRAC | 2 cut(s) | 571, 1073 |
| Mph1103I | ATGCAT | 3 cut(s) | 185, 302, 1470 |
| MroXI | GAANNNNTTC | 2 cut(s) | 98, 1500 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1931, 2217 |
| MspA1I | CMGCKG | 1 cut(s) | 2183 |
| MspCI | CTTAAG | 2 cut(s) | 2015, 2434 |
| MspI | CCGG | 4 cut(s) | 33, 91, 1796, 1919 |
| MspR9I | CCNGG | 5 cut(s) | 91, 220, 1524, 1785, 1919 |
| MunI | CAATTG | 2 cut(s) | 2590, 2665 |
| Mva1269I | GAATGC | 2 cut(s) | 302, 1938 |
| MvaI | CCWGG | 3 cut(s) | 220, 1524, 1785 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 78, 2667 |
| NciI | CCSGG | 2 cut(s) | 91, 1919 |
| NcoI | CCATGG | 2 cut(s) | 47, 781 |
| NdeI | CATATG | 1 cut(s) | 1045 |
| NdeII | GATC | 9 cut(s) | 228, 318, 925, 1006, 1196, 1427, 1885, 2636, 2652 |
| NlaIII | CATG | 8 cut(s) | 51, 183, 304, 356, 401, 785, 1031, 1472 |
| NlaIV | GGNNCC | 5 cut(s) | 345, 574, 1646, 1717, 1916 |
| NmuCI | GTSAC | 2 cut(s) | 559, 2699 |
| NsiI | ATGCAT | 3 cut(s) | 185, 302, 1470 |
| NspI | RCATGY | 1 cut(s) | 183 |
| PaeR7I | CTCGAG | 1 cut(s) | 1002 |
| PctI | GAATGC | 2 cut(s) | 302, 1938 |
| PdmI | GAANNNNTTC | 2 cut(s) | 98, 1500 |
| PfeI | GAWTC | 7 cut(s) | 138, 808, 864, 987, 1895, 1984, 2269 |
| PflFI | GACNNNGTC | 1 cut(s) | 1533 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2288 |
| PinAI | ACCGGT | 2 cut(s) | 32, 1795 |
| PkrI | GCNGC | 2 cut(s) | 1683, 2108 |
| Ple19I | CGATCG | 1 cut(s) | 231 |
| PleI | GAGTC | 3 cut(s) | 1519, 2061, 2316 |
| PmaCI | CACGTG | 1 cut(s) | 264 |
| PmlI | CACGTG | 1 cut(s) | 264 |
| PpsI | GAGTC | 3 cut(s) | 1519, 2061, 2316 |
| Ppu21I | YACGTR | 1 cut(s) | 264 |
| PpuMI | RGGWCCY | 1 cut(s) | 1914 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2592 |
| Psp124BI | GAGCTC | 1 cut(s) | 198 |
| Psp5II | RGGWCCY | 1 cut(s) | 1914 |
| Psp6I | CCWGG | 3 cut(s) | 218, 1522, 1783 |
| PspCI | CACGTG | 1 cut(s) | 264 |
| PspGI | CCWGG | 3 cut(s) | 218, 1522, 1783 |
| PspN4I | GGNNCC | 5 cut(s) | 345, 574, 1646, 1717, 1916 |
| PspPI | GGNCC | 2 cut(s) | 1715, 1914 |
| PspPPI | RGGWCCY | 1 cut(s) | 1914 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 2677, 2709 |
| PstNI | CAGNNNCTG | 2 cut(s) | 811, 2037 |
| PsuI | RGATCY | 3 cut(s) | 1196, 1427, 2652 |
| PsyI | GACNNNGTC | 1 cut(s) | 1533 |
| PvuI | CGATCG | 1 cut(s) | 231 |
| PvuII | CAGCTG | 1 cut(s) | 2183 |
| RsaI | GTAC | 3 cut(s) | 534, 840, 1969 |
| RsaNI | GTAC | 3 cut(s) | 533, 839, 1968 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1931, 2217 |
| SacI | GAGCTC | 1 cut(s) | 198 |
| SatI | GCNGC | 2 cut(s) | 1682, 2107 |
| Sau3AI | GATC | 9 cut(s) | 228, 318, 925, 1006, 1196, 1427, 1885, 2636, 2652 |
| Sau96I | GGNCC | 2 cut(s) | 1715, 1914 |
| ScaI | AGTACT | 1 cut(s) | 534 |
| SchI | GAGTC | 3 cut(s) | 1520, 2062, 2317 |
| ScrFI | CCNGG | 5 cut(s) | 91, 220, 1524, 1785, 1919 |
| SduI | GDGCHC | 3 cut(s) | 14, 198, 2214 |
| SexAI | ACCWGGT | 1 cut(s) | 1783 |
| SfaNI | GCATC | 6 cut(s) | 192, 436, 559, 2493, 2516, 2670 |
| SfcI | CTRYAG | 1 cut(s) | 1407 |
| Sfr274I | CTCGAG | 1 cut(s) | 1002 |
| SinI | GGWCC | 1 cut(s) | 1914 |
| SlaI | CTCGAG | 1 cut(s) | 1002 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1931, 2217 |
| SsiI | CCGC | 2 cut(s) | 2175, 2725 |
| SspI | AATATT | 1 cut(s) | 1834 |
| SspMI | CTAG | 6 cut(s) | 702, 788, 908, 1628, 2658, 2697 |
| SstI | GAGCTC | 1 cut(s) | 198 |
| StyD4I | CCNGG | 5 cut(s) | 89, 218, 1522, 1783, 1917 |
| StyI | CCWWGG | 2 cut(s) | 47, 781 |
| TaaI | ACNGT | 6 cut(s) | 216, 282, 348, 565, 1382, 2384 |
| TaiI | ACGT | 4 cut(s) | 63, 266, 840, 2620 |
| TaqI | TCGA | 3 cut(s) | 1003, 1884, 2642 |
| TatI | WGTACW | 2 cut(s) | 532, 1967 |
| TfiI | GAWTC | 7 cut(s) | 138, 808, 864, 987, 1895, 1984, 2269 |
| TscAI | CASTG | 2 cut(s) | 134, 2521 |
| TseFI | GTSAC | 2 cut(s) | 559, 2699 |
| TseI | GCWGC | 2 cut(s) | 1681, 2106 |
| Tsp45I | GTSAC | 2 cut(s) | 559, 2699 |
| TspRI | CASTG | 2 cut(s) | 134, 2521 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1533 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2288 |
| Vha464I | CTTAAG | 2 cut(s) | 2015, 2434 |
| VpaK11BI | GGWCC | 1 cut(s) | 1914 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2434 |
| XapI | RAATTY | 7 cut(s) | 731, 1148, 1972, 2132, 2403, 2626, 2645 |
| XceI | RCATGY | 1 cut(s) | 183 |
| XhoI | CTCGAG | 1 cut(s) | 1002 |
| XmiI | GTMKAC | 1 cut(s) | 2056 |
| XmnI | GAANNNNTTC | 2 cut(s) | 98, 1500 |
| XspI | CTAG | 6 cut(s) | 702, 788, 908, 1628, 2658, 2697 |
| ZrmI | AGTACT | 1 cut(s) | 534 |
| Zsp2I | ATGCAT | 3 cut(s) | 185, 302, 1470 |