TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 18 - 197 | 5.3e-56 | TIR domain |
| TIR_2 | PF13676 | 21 - 117 | 3e-15 | TIR domain |
| NB-ARC | PF00931 | 201 - 371 | 3.3e-25 | NB-ARC domain |
| NACHT | PF05729 | 222 - 363 | 1.6e-06 | NACHT domain |
| WHD_ROQ1 | PF23282 | 438 - 509 | 2.8e-12 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_13 | PF23286 | 699 - 873 | 1.8e-07 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 791 - 864 | 3.4e-06 | Leucine-rich repeat region |
| C-JID | PF20160 | 921 - 1051 | 1.3e-07 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2273 |
| AccB1I | GGYRCC | 1 cut(s) | 3227 |
| AccI | GTMKAC | 2 cut(s) | 1477, 2071 |
| AccII | CGCG | 1 cut(s) | 3107 |
| AccIII | TCCGGA | 1 cut(s) | 190 |
| AciI | CCGC | 5 cut(s) | 91, 130, 774, 2716, 2944 |
| AclWI | GGATC | 4 cut(s) | 152, 933, 1993, 2912 |
| AcoI | YGGCCR | 1 cut(s) | 462 |
| AcsI | RAATTY | 8 cut(s) | 807, 1231, 1325, 1400, 2034, 2041, 2147, 2775 |
| AcuI | CTGAAG | 4 cut(s) | 58, 402, 1140, 1712 |
| AcvI | CACGTG | 1 cut(s) | 264 |
| AdeI | CACNNNGTG | 2 cut(s) | 267, 2909 |
| AfaI | GTAC | 6 cut(s) | 534, 1208, 1948, 1984, 2288, 2635 |
| AfeI | AGCGCT | 1 cut(s) | 2709 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 3046 |
| AflIII | ACRYGT | 2 cut(s) | 60, 1111 |
| AgeI | ACCGGT | 1 cut(s) | 32 |
| AjiI | CACGTC | 1 cut(s) | 61 |
| AjnI | CCWGG | 4 cut(s) | 218, 1537, 2764, 2920 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 936, 968, 2816, 2848 |
| AleI | CACNNNNGTG | 1 cut(s) | 2910 |
| Alw21I | GWGCWC | 4 cut(s) | 14, 2878, 3136, 3147 |
| Alw26I | GTCTC | 8 cut(s) | 497, 563, 727, 1175, 2033, 2043, 2802, 2986 |
| Alw44I | GTGCAC | 1 cut(s) | 3132 |
| AlwI | GGATC | 4 cut(s) | 152, 933, 1993, 2912 |
| Aor13HI | TCCGGA | 1 cut(s) | 190 |
| Aor51HI | AGCGCT | 1 cut(s) | 2709 |
| AoxI | GGCC | 4 cut(s) | 462, 1668, 1729, 3126 |
| ApaI | GGGCCC | 1 cut(s) | 3130 |
| ApaLI | GTGCAC | 1 cut(s) | 3132 |
| ApeKI | GCWGC | 6 cut(s) | 127, 372, 1696, 2121, 2281, 2305 |
| ApoI | RAATTY | 8 cut(s) | 807, 1231, 1325, 1400, 2034, 2041, 2147, 2775 |
| AsiGI | ACCGGT | 1 cut(s) | 32 |
| Asp700I | GAANNNNTTC | 5 cut(s) | 837, 1077, 1512, 2390, 3193 |
| AspLEI | GCGC | 3 cut(s) | 83, 2710, 3107 |
| AspS9I | GGNCC | 6 cut(s) | 573, 1730, 1929, 3049, 3126, 3127 |
| AsuHPI | GGTGA | 6 cut(s) | 1847, 2257, 2348, 2827, 3002, 3124 |
| AsuII | TTCGAA | 1 cut(s) | 3078 |
| AvaII | GGWCC | 3 cut(s) | 573, 1929, 3049 |
| BaeGI | GKGCMC | 3 cut(s) | 3033, 3130, 3136 |
| BalI | TGGCCA | 1 cut(s) | 464 |
| BanI | GGYRCC | 1 cut(s) | 3227 |
| BanII | GRGCYC | 1 cut(s) | 3130 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1685, 1717 |
| BbrPI | CACGTG | 1 cut(s) | 264 |
| Bbv12I | GWGCWC | 4 cut(s) | 14, 2878, 3136, 3147 |
| BbvI | GCAGC | 6 cut(s) | 139, 384, 1683, 2108, 2292, 2293 |
| BccI | CCATC | 7 cut(s) | 432, 667, 1295, 1309, 2010, 2014, 2668 |
| BceAI | ACGGC | 1 cut(s) | 2269 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2065, 2099 |
| BciT130I | CCWGG | 4 cut(s) | 220, 1539, 2766, 2922 |
| BciVI | GTATCC | 2 cut(s) | 592, 1788 |
| BclI | TGATCA | 2 cut(s) | 1852, 3162 |
| BcoDI | GTCTC | 8 cut(s) | 497, 563, 727, 1175, 2033, 2043, 2802, 2986 |
| BfaI | CTAG | 6 cut(s) | 555, 702, 908, 1002, 1019, 2688 |
| BfmI | CTRYAG | 2 cut(s) | 2306, 3285 |
| BfoI | RGCGCY | 1 cut(s) | 2711 |
| BfuI | GTATCC | 2 cut(s) | 592, 1788 |
| BglII | AGATCT | 1 cut(s) | 819 |
| BisI | GCNGC | 7 cut(s) | 128, 131, 373, 1697, 2122, 2282, 2306 |
| BlsI | GCNGC | 7 cut(s) | 129, 132, 374, 1698, 2123, 2283, 2307 |
| BmcAI | AGTACT | 1 cut(s) | 534 |
| Bme1390I | CCNGG | 4 cut(s) | 220, 1539, 2766, 2922 |
| Bme18I | GGWCC | 3 cut(s) | 573, 1929, 3049 |
| BmgBI | CACGTC | 1 cut(s) | 61 |
| BmgT120I | GGNCC | 6 cut(s) | 573, 1730, 1929, 3049, 3126, 3127 |
| BmiI | GGNNCC | 9 cut(s) | 345, 574, 1732, 1931, 2367, 3051, 3127, 3128, 3229 |
| BmrFI | CCNGG | 4 cut(s) | 220, 1539, 2766, 2922 |
| BmsI | GCATC | 5 cut(s) | 436, 559, 1213, 2827, 3092 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 707, 739, 709, 741, 1658, 1690 |
| BpmI | CTGGAG | 4 cut(s) | 629, 1185, 1789, 3065 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1177 |
| Bpu14I | TTCGAA | 1 cut(s) | 3078 |
| BpuEI | CTTGAG | 7 cut(s) | 765, 1685, 1900, 1942, 1979, 2006, 2744 |
| Bsa29I | ATCGAT | 1 cut(s) | 1899 |
| BsaAI | YACGTR | 1 cut(s) | 264 |
| BsaBI | GATNNNNATC | 2 cut(s) | 924, 1659 |
| BsaI | GGTCTC | 1 cut(s) | 1175 |
| BsaJI | CCNNGG | 2 cut(s) | 47, 2908 |
| BsaWI | WCCGGW | 4 cut(s) | 32, 190, 1810, 2596 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1933, 1963, 2799, 2829 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 3046 |
| Bse118I | RCCGGY | 1 cut(s) | 32 |
| Bse1I | ACTGG | 5 cut(s) | 865, 945, 971, 1772, 2752 |
| Bse3DI | GCAATG | 3 cut(s) | 1338, 2010, 2015 |
| Bse8I | GATNNNNATC | 2 cut(s) | 924, 1659 |
| BseAI | TCCGGA | 1 cut(s) | 190 |
| BseBI | CCWGG | 4 cut(s) | 220, 1539, 2766, 2922 |
| BseCI | ATCGAT | 1 cut(s) | 1899 |
| BseDI | CCNNGG | 2 cut(s) | 47, 2908 |
| BseJI | GATNNNNATC | 2 cut(s) | 924, 1659 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 3046 |
| BseMI | GCAATG | 3 cut(s) | 1338, 2010, 2015 |
| BseMII | CTCAG | 3 cut(s) | 591, 2506, 2811 |
| BseNI | ACTGG | 5 cut(s) | 865, 945, 971, 1772, 2752 |
| BseRI | GAGGAG | 1 cut(s) | 1939 |
| BseSI | GKGCMC | 3 cut(s) | 3033, 3130, 3136 |
| BseXI | GCAGC | 6 cut(s) | 139, 384, 1683, 2108, 2292, 2293 |
| BseYI | CCCAGC | 1 cut(s) | 473 |
| BsgI | GTGCAG | 1 cut(s) | 2886 |
| Bsh1236I | CGCG | 1 cut(s) | 3107 |
| Bsh1285I | CGRYCG | 1 cut(s) | 231 |
| BshFI | GGCC | 4 cut(s) | 464, 1670, 1731, 3128 |
| BshNI | GGYRCC | 1 cut(s) | 3227 |
| BshTI | ACCGGT | 1 cut(s) | 32 |
| BshVI | ATCGAT | 1 cut(s) | 1899 |
| BsiEI | CGRYCG | 1 cut(s) | 231 |
| BsiHKAI | GWGCWC | 4 cut(s) | 14, 2878, 3136, 3147 |
| BsiSI | CCGG | 4 cut(s) | 33, 191, 1811, 2597 |
| BslFI | GGGAC | 1 cut(s) | 167 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 3046 |
| BsmAI | GTCTC | 8 cut(s) | 497, 563, 727, 1175, 2033, 2043, 2802, 2986 |
| BsmFI | GGGAC | 1 cut(s) | 167 |
| BsmI | GAATGC | 2 cut(s) | 302, 2523 |
| BsnI | GGCC | 4 cut(s) | 464, 1670, 1731, 3128 |
| Bso31I | GGTCTC | 1 cut(s) | 1175 |
| Bsp119I | TTCGAA | 1 cut(s) | 3078 |
| Bsp120I | GGGCCC | 1 cut(s) | 3126 |
| Bsp1286I | GDGCHC | 6 cut(s) | 14, 2878, 3033, 3130, 3136, 3147 |
| Bsp13I | TCCGGA | 1 cut(s) | 190 |
| Bsp19I | CCATGG | 1 cut(s) | 47 |
| BspACI | CCGC | 5 cut(s) | 91, 130, 774, 2716, 2944 |
| BspANI | GGCC | 4 cut(s) | 464, 1670, 1731, 3128 |
| BspCNI | CTCAG | 3 cut(s) | 590, 2505, 2812 |
| BspDI | ATCGAT | 1 cut(s) | 1899 |
| BspEI | TCCGGA | 1 cut(s) | 190 |
| BspFNI | CGCG | 1 cut(s) | 3107 |
| BspHI | TCATGA | 1 cut(s) | 141 |
| BspLI | GGNNCC | 9 cut(s) | 345, 574, 1732, 1931, 2367, 3051, 3127, 3128, 3229 |
| BspMAI | CTGCAG | 2 cut(s) | 2310, 3289 |
| BspPI | GGATC | 4 cut(s) | 152, 933, 1993, 2912 |
| BspQI | GCTCTTC | 3 cut(s) | 1083, 1527, 3150 |
| BspT104I | TTCGAA | 1 cut(s) | 3078 |
| BspT107I | GGYRCC | 1 cut(s) | 3227 |
| BspTNI | GGTCTC | 1 cut(s) | 1175 |
| BsrDI | GCAATG | 3 cut(s) | 1338, 2010, 2015 |
| BsrFI | RCCGGY | 1 cut(s) | 32 |
| BsrI | ACTGG | 5 cut(s) | 865, 945, 971, 1772, 2752 |
| BssAI | RCCGGY | 1 cut(s) | 32 |
| BssECI | CCNNGG | 2 cut(s) | 47, 2908 |
| BssNAI | GTATAC | 1 cut(s) | 1478 |
| BssT1I | CCWWGG | 1 cut(s) | 47 |
| Bst1107I | GTATAC | 1 cut(s) | 1478 |
| Bst2UI | CCWGG | 4 cut(s) | 220, 1539, 2766, 2922 |
| Bst4CI | ACNGT | 9 cut(s) | 181, 282, 537, 565, 1031, 1273, 2426, 2909, 3138 |
| Bst6I | CTCTTC | 7 cut(s) | 300, 396, 1083, 1527, 1641, 2520, 3150 |
| BstBAI | YACGTR | 1 cut(s) | 264 |
| BstBI | TTCGAA | 1 cut(s) | 3078 |
| BstC8I | GCNNGC | 2 cut(s) | 272, 2622 |
| BstDEI | CTNAG | 9 cut(s) | 285, 577, 603, 1177, 1904, 2476, 2492, 2538, 2820 |
| BstDSI | CCRYGG | 2 cut(s) | 47, 2908 |
| BstEII | GGTNACC | 1 cut(s) | 2728 |
| BstFNI | CGCG | 1 cut(s) | 3107 |
| BstH2I | RGCGCY | 1 cut(s) | 2711 |
| BstHHI | GCGC | 3 cut(s) | 83, 2710, 3107 |
| BstMAI | GTCTC | 8 cut(s) | 497, 563, 727, 1175, 2033, 2043, 2802, 2986 |
| BstMCI | CGRYCG | 1 cut(s) | 231 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 78, 470, 2539 |
| BstNI | CCWGG | 4 cut(s) | 220, 1539, 2766, 2922 |
| BstNSI | RCATGY | 4 cut(s) | 1016, 1115, 2874, 3252 |
| BstPI | GGTNACC | 1 cut(s) | 2728 |
| BstSCI | CCNGG | 4 cut(s) | 218, 1537, 2764, 2920 |
| BstSFI | CTRYAG | 2 cut(s) | 2306, 3285 |
| BstSLI | GKGCMC | 3 cut(s) | 3033, 3130, 3136 |
| BstUI | CGCG | 1 cut(s) | 3107 |
| BstV1I | GCAGC | 6 cut(s) | 139, 384, 1683, 2108, 2292, 2293 |
| BstX2I | RGATCY | 3 cut(s) | 819, 1998, 2917 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1227 |
| BstYI | RGATCY | 3 cut(s) | 819, 1998, 2917 |
| BstZ17I | GTATAC | 1 cut(s) | 1478 |
| Bsu15I | ATCGAT | 1 cut(s) | 1899 |
| BsuI | GTATCC | 2 cut(s) | 592, 1788 |
| BsuRI | GGCC | 4 cut(s) | 464, 1670, 1731, 3128 |
| BsuTUI | ATCGAT | 1 cut(s) | 1899 |
| BtgI | CCRYGG | 2 cut(s) | 47, 2908 |
| BtgZI | GCGATG | 1 cut(s) | 20 |
| BtrI | CACGTC | 1 cut(s) | 61 |
| BtsI | GCAGTG | 1 cut(s) | 201 |
| BtsIMutI | CAGTG | 4 cut(s) | 201, 561, 2500, 3134 |
| Cac8I | GCNNGC | 2 cut(s) | 272, 2622 |
| CciI | TCATGA | 1 cut(s) | 141 |
| CfoI | GCGC | 3 cut(s) | 83, 2710, 3107 |
| Cfr10I | RCCGGY | 1 cut(s) | 32 |
| Cfr13I | GGNCC | 6 cut(s) | 573, 1730, 1929, 3049, 3126, 3127 |
| ClaI | ATCGAT | 1 cut(s) | 1899 |
| CseI | GACGC | 1 cut(s) | 1554 |
| Csp6I | GTAC | 6 cut(s) | 533, 1207, 1947, 1983, 2287, 2634 |
| CspAI | ACCGGT | 1 cut(s) | 32 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 518, 553 |
| CviQI | GTAC | 6 cut(s) | 533, 1207, 1947, 1983, 2287, 2634 |
| DdeI | CTNAG | 9 cut(s) | 285, 577, 603, 1177, 1904, 2476, 2492, 2538, 2820 |
| DraIII | CACNNNGTG | 2 cut(s) | 267, 2909 |
| EaeI | YGGCCR | 1 cut(s) | 462 |
| Eam1104I | CTCTTC | 7 cut(s) | 300, 396, 1083, 1527, 1641, 2520, 3150 |
| EarI | CTCTTC | 7 cut(s) | 300, 396, 1083, 1527, 1641, 2520, 3150 |
| Eco130I | CCWWGG | 1 cut(s) | 47 |
| Eco147I | AGGCCT | 1 cut(s) | 1670 |
| Eco24I | GRGCYC | 1 cut(s) | 3130 |
| Eco31I | GGTCTC | 1 cut(s) | 1175 |
| Eco47I | GGWCC | 3 cut(s) | 573, 1929, 3049 |
| Eco47III | AGCGCT | 1 cut(s) | 2709 |
| Eco57I | CTGAAG | 4 cut(s) | 58, 402, 1140, 1712 |
| Eco72I | CACGTG | 1 cut(s) | 264 |
| Eco91I | GGTNACC | 1 cut(s) | 2728 |
| EcoO109I | RGGNCCY | 4 cut(s) | 573, 1929, 3049, 3126 |
| EcoO65I | GGTNACC | 1 cut(s) | 2728 |
| EcoRI | GAATTC | 1 cut(s) | 1231 |
| EcoRII | CCWGG | 4 cut(s) | 218, 1537, 2764, 2920 |
| EcoT14I | CCWWGG | 1 cut(s) | 47 |
| EcoT22I | ATGCAT | 2 cut(s) | 302, 1228 |
| EcoT38I | GRGCYC | 1 cut(s) | 3130 |
| ErhI | CCWWGG | 1 cut(s) | 47 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 888, 920, 3181, 3213 |
| FaqI | GGGAC | 1 cut(s) | 167 |
| FauI | CCCGC | 1 cut(s) | 98 |
| FauNDI | CATATG | 2 cut(s) | 1045, 2088 |
| FbaI | TGATCA | 2 cut(s) | 1852, 3162 |
| FblI | GTMKAC | 2 cut(s) | 1477, 2071 |
| Fnu4HI | GCNGC | 7 cut(s) | 128, 131, 373, 1697, 2122, 2282, 2306 |
| FriOI | GRGCYC | 1 cut(s) | 3130 |
| Fsp4HI | GCNGC | 7 cut(s) | 128, 131, 373, 1697, 2122, 2282, 2306 |
| FspBI | CTAG | 6 cut(s) | 555, 702, 908, 1002, 1019, 2688 |
| GlaI | GCGC | 3 cut(s) | 82, 2709, 3106 |
| GluI | GCNGC | 7 cut(s) | 128, 131, 373, 1697, 2122, 2282, 2306 |
| GsaI | CCCAGC | 1 cut(s) | 477 |
| GsuI | CTGGAG | 4 cut(s) | 629, 1185, 1789, 3065 |
| HaeII | RGCGCY | 1 cut(s) | 2711 |
| HaeIII | GGCC | 4 cut(s) | 464, 1670, 1731, 3128 |
| HapII | CCGG | 4 cut(s) | 33, 191, 1811, 2597 |
| HgaI | GACGC | 1 cut(s) | 1554 |
| HhaI | GCGC | 3 cut(s) | 83, 2710, 3107 |
| Hin6I | GCGC | 3 cut(s) | 81, 2708, 3105 |
| HinP1I | GCGC | 3 cut(s) | 81, 2708, 3105 |
| HindIII | AAGCTT | 3 cut(s) | 1098, 2249, 2540 |
| HpaII | CCGG | 4 cut(s) | 33, 191, 1811, 2597 |
| HphI | GGTGA | 6 cut(s) | 1847, 2257, 2348, 2827, 3002, 3124 |
| Hpy166II | GTNNAC | 5 cut(s) | 1478, 1688, 1918, 2072, 3134 |
| Hpy8I | GTNNAC | 5 cut(s) | 1478, 1688, 1918, 2072, 3134 |
| Hpy99I | CGWCG | 2 cut(s) | 62, 3275 |
| HpyCH4III | ACNGT | 9 cut(s) | 181, 282, 537, 565, 1031, 1273, 2426, 2909, 3138 |
| HpyCH4IV | ACGT | 3 cut(s) | 60, 263, 3068 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 78, 470, 2539 |
| HpyF3I | CTNAG | 9 cut(s) | 285, 577, 603, 1177, 1904, 2476, 2492, 2538, 2820 |
| HpySE526I | ACGT | 3 cut(s) | 60, 263, 3068 |
| HspAI | GCGC | 3 cut(s) | 81, 2708, 3105 |
| Kpn2I | TCCGGA | 1 cut(s) | 190 |
| Ksp22I | TGATCA | 2 cut(s) | 1852, 3162 |
| LguI | GCTCTTC | 3 cut(s) | 1083, 1527, 3150 |
| LmnI | GCTCC | 2 cut(s) | 193, 540 |
| Lsp1109I | GCAGC | 6 cut(s) | 139, 384, 1683, 2108, 2292, 2293 |
| LweI | GCATC | 5 cut(s) | 436, 559, 1213, 2827, 3092 |
| MaeI | CTAG | 6 cut(s) | 555, 702, 908, 1002, 1019, 2688 |
| MaeII | ACGT | 3 cut(s) | 60, 263, 3068 |
| MaeIII | GTNAC | 9 cut(s) | 1021, 1626, 1907, 2509, 2640, 2728, 2815, 3064, 3112 |
| MfeI | CAATTG | 3 cut(s) | 2220, 2582, 2629 |
| MflI | RGATCY | 3 cut(s) | 819, 1998, 2917 |
| MhlI | GDGCHC | 6 cut(s) | 14, 2878, 3033, 3130, 3136, 3147 |
| MlsI | TGGCCA | 1 cut(s) | 464 |
| MluNI | TGGCCA | 1 cut(s) | 464 |
| MmeI | TCCRAC | 3 cut(s) | 571, 934, 1073 |
| Mox20I | TGGCCA | 1 cut(s) | 464 |
| Mph1103I | ATGCAT | 2 cut(s) | 302, 1228 |
| MroI | TCCGGA | 1 cut(s) | 190 |
| MroXI | GAANNNNTTC | 5 cut(s) | 837, 1077, 1512, 2390, 3193 |
| MscI | TGGCCA | 1 cut(s) | 464 |
| MslI | CAYNNNNRTG | 1 cut(s) | 2910 |
| Msp20I | TGGCCA | 1 cut(s) | 464 |
| MspA1I | CMGCKG | 1 cut(s) | 130 |
| MspI | CCGG | 4 cut(s) | 33, 191, 1811, 2597 |
| MspR9I | CCNGG | 4 cut(s) | 220, 1539, 2766, 2922 |
| MunI | CAATTG | 3 cut(s) | 2220, 2582, 2629 |
| Mva1269I | GAATGC | 2 cut(s) | 302, 2523 |
| MvaI | CCWGG | 4 cut(s) | 220, 1539, 2766, 2922 |
| MvnI | CGCG | 1 cut(s) | 3107 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 78, 470, 2539 |
| NcoI | CCATGG | 1 cut(s) | 47 |
| NdeI | CATATG | 2 cut(s) | 1045, 2088 |
| NlaIV | GGNNCC | 9 cut(s) | 345, 574, 1732, 1931, 2367, 3051, 3127, 3128, 3229 |
| NmuCI | GTSAC | 3 cut(s) | 1021, 2815, 3112 |
| NsiI | ATGCAT | 2 cut(s) | 302, 1228 |
| NspI | RCATGY | 4 cut(s) | 1016, 1115, 2874, 3252 |
| NspV | TTCGAA | 1 cut(s) | 3078 |
| OliI | CACNNNNGTG | 1 cut(s) | 2910 |
| PagI | TCATGA | 1 cut(s) | 141 |
| PceI | AGGCCT | 1 cut(s) | 1670 |
| PciI | ACATGT | 1 cut(s) | 1111 |
| PciSI | GCTCTTC | 3 cut(s) | 1083, 1527, 3150 |
| PctI | GAATGC | 2 cut(s) | 302, 2523 |
| PdmI | GAANNNNTTC | 5 cut(s) | 837, 1077, 1512, 2390, 3193 |
| PfeI | GAWTC | 7 cut(s) | 138, 289, 864, 987, 1660, 2140, 2311 |
| PflFI | GACNNNGTC | 1 cut(s) | 1548 |
| PfoI | TCCNGGA | 1 cut(s) | 2764 |
| PinAI | ACCGGT | 1 cut(s) | 32 |
| PkrI | GCNGC | 7 cut(s) | 129, 132, 374, 1698, 2123, 2283, 2307 |
| Ple19I | CGATCG | 1 cut(s) | 231 |
| PmaCI | CACGTG | 1 cut(s) | 264 |
| PmlI | CACGTG | 1 cut(s) | 264 |
| Ppu21I | YACGTR | 1 cut(s) | 264 |
| PpuMI | RGGWCCY | 3 cut(s) | 573, 1929, 3049 |
| PscI | ACATGT | 1 cut(s) | 1111 |
| PsiI | TTATAA | 1 cut(s) | 2273 |
| Psp5II | RGGWCCY | 3 cut(s) | 573, 1929, 3049 |
| Psp6I | CCWGG | 4 cut(s) | 218, 1537, 2764, 2920 |
| PspCI | CACGTG | 1 cut(s) | 264 |
| PspEI | GGTNACC | 1 cut(s) | 2728 |
| PspFI | CCCAGC | 1 cut(s) | 473 |
| PspGI | CCWGG | 4 cut(s) | 218, 1537, 2764, 2920 |
| PspN4I | GGNNCC | 9 cut(s) | 345, 574, 1732, 1931, 2367, 3051, 3127, 3128, 3229 |
| PspOMI | GGGCCC | 1 cut(s) | 3126 |
| PspPI | GGNCC | 6 cut(s) | 573, 1730, 1929, 3049, 3126, 3127 |
| PspPPI | RGGWCCY | 3 cut(s) | 573, 1929, 3049 |
| PstI | CTGCAG | 2 cut(s) | 2310, 3289 |
| PsuI | RGATCY | 3 cut(s) | 819, 1998, 2917 |
| PsyI | GACNNNGTC | 1 cut(s) | 1548 |
| PvuI | CGATCG | 1 cut(s) | 231 |
| RsaI | GTAC | 6 cut(s) | 534, 1208, 1948, 1984, 2288, 2635 |
| RsaNI | GTAC | 6 cut(s) | 533, 1207, 1947, 1983, 2287, 2634 |
| RseI | CAYNNNNRTG | 1 cut(s) | 2910 |
| SapI | GCTCTTC | 3 cut(s) | 1083, 1527, 3150 |
| SatI | GCNGC | 7 cut(s) | 128, 131, 373, 1697, 2122, 2282, 2306 |
| Sau96I | GGNCC | 6 cut(s) | 573, 1730, 1929, 3049, 3126, 3127 |
| ScaI | AGTACT | 1 cut(s) | 534 |
| ScrFI | CCNGG | 4 cut(s) | 220, 1539, 2766, 2922 |
| SduI | GDGCHC | 6 cut(s) | 14, 2878, 3033, 3130, 3136, 3147 |
| SfaNI | GCATC | 5 cut(s) | 436, 559, 1213, 2827, 3092 |
| SfcI | CTRYAG | 2 cut(s) | 2306, 3285 |
| SfuI | TTCGAA | 1 cut(s) | 3078 |
| SinI | GGWCC | 3 cut(s) | 573, 1929, 3049 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 2910 |
| SmlI | CTYRAG | 7 cut(s) | 780, 1664, 1879, 1921, 1958, 2021, 2723 |
| SmoI | CTYRAG | 7 cut(s) | 780, 1664, 1879, 1921, 1958, 2021, 2723 |
| SseBI | AGGCCT | 1 cut(s) | 1670 |
| SsiI | CCGC | 5 cut(s) | 91, 130, 774, 2716, 2944 |
| SspI | AATATT | 4 cut(s) | 330, 1849, 2106, 3278 |
| SspMI | CTAG | 6 cut(s) | 555, 702, 908, 1002, 1019, 2688 |
| StuI | AGGCCT | 1 cut(s) | 1670 |
| StyD4I | CCNGG | 4 cut(s) | 218, 1537, 2764, 2920 |
| StyI | CCWWGG | 1 cut(s) | 47 |
| TaaI | ACNGT | 9 cut(s) | 181, 282, 537, 565, 1031, 1273, 2426, 2909, 3138 |
| TaiI | ACGT | 3 cut(s) | 63, 266, 3071 |
| TaqI | TCGA | 4 cut(s) | 210, 1081, 1899, 3078 |
| TatI | WGTACW | 2 cut(s) | 532, 2633 |
| TauI | GCSGC | 1 cut(s) | 133 |
| TfiI | GAWTC | 7 cut(s) | 138, 289, 864, 987, 1660, 2140, 2311 |
| TscAI | CASTG | 4 cut(s) | 208, 568, 2500, 3141 |
| TseFI | GTSAC | 3 cut(s) | 1021, 2815, 3112 |
| TseI | GCWGC | 6 cut(s) | 127, 372, 1696, 2121, 2281, 2305 |
| Tsp45I | GTSAC | 3 cut(s) | 1021, 2815, 3112 |
| TspGWI | ACGGA | 5 cut(s) | 1071, 1903, 2886, 3114, 3227 |
| TspRI | CASTG | 4 cut(s) | 208, 568, 2500, 3141 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1548 |
| VneI | GTGCAC | 1 cut(s) | 3132 |
| VpaK11BI | GGWCC | 3 cut(s) | 573, 1929, 3049 |
| XapI | RAATTY | 8 cut(s) | 807, 1231, 1325, 1400, 2034, 2041, 2147, 2775 |
| XceI | RCATGY | 4 cut(s) | 1016, 1115, 2874, 3252 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 3040 |
| XmiI | GTMKAC | 2 cut(s) | 1477, 2071 |
| XmnI | GAANNNNTTC | 5 cut(s) | 837, 1077, 1512, 2390, 3193 |
| XspI | CTAG | 6 cut(s) | 555, 702, 908, 1002, 1019, 2688 |
| ZrmI | AGTACT | 1 cut(s) | 534 |
| Zsp2I | ATGCAT | 2 cut(s) | 302, 1228 |