TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| C-JID | PF20160 | 88 - 233 | 9.8e-16 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 623 |
| AciI | CCGC | 2 cut(s) | 214, 621 |
| AclWI | GGATC | 2 cut(s) | 101, 425 |
| AcsI | RAATTY | 2 cut(s) | 134, 276 |
| AcuI | CTGAAG | 1 cut(s) | 435 |
| AfaI | GTAC | 4 cut(s) | 85, 166, 261, 683 |
| AgsI | TTSAA | 4 cut(s) | 292, 386, 447, 652 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 400 |
| AjiI | CACGTC | 1 cut(s) | 562 |
| AjnI | CCWGG | 1 cut(s) | 265 |
| AluBI | AGCT | 2 cut(s) | 389, 629 |
| AluI | AGCT | 2 cut(s) | 389, 629 |
| Alw21I | GWGCWC | 1 cut(s) | 679 |
| AlwI | GGATC | 2 cut(s) | 101, 425 |
| Ama87I | CYCGRG | 1 cut(s) | 624 |
| AoxI | GGCC | 2 cut(s) | 669, 750 |
| ApaI | GGGCCC | 1 cut(s) | 673 |
| ApeKI | GCWGC | 2 cut(s) | 732, 806 |
| ApoI | RAATTY | 2 cut(s) | 134, 276 |
| AspLEI | GCGC | 1 cut(s) | 379 |
| AspS9I | GGNCC | 2 cut(s) | 669, 670 |
| AsuHPI | GGTGA | 3 cut(s) | 79, 521, 667 |
| AsuII | TTCGAA | 1 cut(s) | 615 |
| AvaI | CYCGRG | 1 cut(s) | 624 |
| BaeGI | GKGCMC | 1 cut(s) | 673 |
| BanII | GRGCYC | 1 cut(s) | 673 |
| Bbv12I | GWGCWC | 1 cut(s) | 679 |
| BbvI | GCAGC | 2 cut(s) | 744, 818 |
| BccI | CCATC | 1 cut(s) | 453 |
| BceAI | ACGGC | 1 cut(s) | 392 |
| BciT130I | CCWGG | 1 cut(s) | 267 |
| BciVI | GTATCC | 1 cut(s) | 461 |
| BfaI | CTAG | 1 cut(s) | 186 |
| BfmI | CTRYAG | 2 cut(s) | 121, 454 |
| BfuI | GTATCC | 1 cut(s) | 461 |
| BisI | GCNGC | 2 cut(s) | 733, 807 |
| BlsI | GCNGC | 2 cut(s) | 734, 808 |
| Bme1390I | CCNGG | 1 cut(s) | 267 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 400 |
| BmeT110I | CYCGRG | 1 cut(s) | 624 |
| BmgBI | CACGTC | 1 cut(s) | 562 |
| BmgT120I | GGNCC | 2 cut(s) | 669, 670 |
| BmiI | GGNNCC | 3 cut(s) | 26, 670, 671 |
| BmrFI | CCNGG | 1 cut(s) | 267 |
| BmrI | ACTGGG | 1 cut(s) | 546 |
| BmsI | GCATC | 3 cut(s) | 159, 510, 635 |
| BmuI | ACTGGG | 1 cut(s) | 546 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 692, 724 |
| Bpu14I | TTCGAA | 1 cut(s) | 615 |
| BpuEI | CTTGAG | 3 cut(s) | 181, 375, 602 |
| BsaBI | GATNNNNATC | 2 cut(s) | 429, 525 |
| BsaJI | CCNNGG | 1 cut(s) | 753 |
| BsaWI | WCCGGW | 1 cut(s) | 598 |
| Bse1I | ACTGG | 1 cut(s) | 552 |
| Bse8I | GATNNNNATC | 2 cut(s) | 429, 525 |
| BseBI | CCWGG | 1 cut(s) | 267 |
| BseDI | CCNNGG | 1 cut(s) | 753 |
| BseGI | GGATG | 2 cut(s) | 504, 763 |
| BseJI | GATNNNNATC | 2 cut(s) | 429, 525 |
| BseMII | CTCAG | 2 cut(s) | 296, 584 |
| BseNI | ACTGG | 1 cut(s) | 552 |
| BseSI | GKGCMC | 1 cut(s) | 673 |
| BseXI | GCAGC | 2 cut(s) | 744, 818 |
| Bsh1285I | CGRYCG | 1 cut(s) | 171 |
| BshFI | GGCC | 2 cut(s) | 671, 752 |
| BsiEI | CGRYCG | 1 cut(s) | 171 |
| BsiHKAI | GWGCWC | 1 cut(s) | 679 |
| BsiHKCI | CYCGRG | 1 cut(s) | 624 |
| BsiSI | CCGG | 1 cut(s) | 599 |
| BsnI | GGCC | 2 cut(s) | 671, 752 |
| BsoBI | CYCGRG | 1 cut(s) | 624 |
| Bsp119I | TTCGAA | 1 cut(s) | 615 |
| Bsp120I | GGGCCC | 1 cut(s) | 669 |
| Bsp1286I | GDGCHC | 2 cut(s) | 673, 679 |
| Bsp1407I | TGTACA | 1 cut(s) | 681 |
| Bsp143I | GATC | 4 cut(s) | 106, 430, 526, 705 |
| Bsp19I | CCATGG | 1 cut(s) | 753 |
| BspACI | CCGC | 2 cut(s) | 214, 621 |
| BspANI | GGCC | 2 cut(s) | 671, 752 |
| BspCNI | CTCAG | 2 cut(s) | 295, 583 |
| BspHI | TCATGA | 1 cut(s) | 556 |
| BspLI | GGNNCC | 3 cut(s) | 26, 670, 671 |
| BspMAI | CTGCAG | 1 cut(s) | 125 |
| BspPI | GGATC | 2 cut(s) | 101, 425 |
| BspT104I | TTCGAA | 1 cut(s) | 615 |
| BsrBI | CCGCTC | 1 cut(s) | 623 |
| BsrGI | TGTACA | 1 cut(s) | 681 |
| BsrI | ACTGG | 1 cut(s) | 552 |
| BssECI | CCNNGG | 1 cut(s) | 753 |
| BssMI | GATC | 4 cut(s) | 106, 430, 526, 705 |
| BssT1I | CCWWGG | 1 cut(s) | 753 |
| Bst2UI | CCWGG | 1 cut(s) | 267 |
| Bst4CI | ACNGT | 3 cut(s) | 169, 455, 578 |
| Bst6I | CTCTTC | 3 cut(s) | 478, 693, 849 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 156 |
| BstAUI | TGTACA | 1 cut(s) | 681 |
| BstBI | TTCGAA | 1 cut(s) | 615 |
| BstDEI | CTNAG | 2 cut(s) | 282, 570 |
| BstDSI | CCRYGG | 1 cut(s) | 753 |
| BstF5I | GGATG | 2 cut(s) | 504, 763 |
| BstHHI | GCGC | 1 cut(s) | 379 |
| BstKTI | GATC | 4 cut(s) | 109, 433, 529, 708 |
| BstMBI | GATC | 4 cut(s) | 106, 430, 526, 705 |
| BstMCI | CGRYCG | 1 cut(s) | 171 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 156, 374 |
| BstNI | CCWGG | 1 cut(s) | 267 |
| BstNSI | RCATGY | 2 cut(s) | 345, 594 |
| BstSCI | CCNGG | 1 cut(s) | 265 |
| BstSFI | CTRYAG | 2 cut(s) | 121, 454 |
| BstSLI | GKGCMC | 1 cut(s) | 673 |
| BstV1I | GCAGC | 2 cut(s) | 744, 818 |
| BstX2I | RGATCY | 2 cut(s) | 106, 430 |
| BstYI | RGATCY | 2 cut(s) | 106, 430 |
| BsuI | GTATCC | 1 cut(s) | 461 |
| BsuRI | GGCC | 2 cut(s) | 671, 752 |
| BtgI | CCRYGG | 1 cut(s) | 753 |
| BtrI | CACGTC | 1 cut(s) | 562 |
| BtsCI | GGATG | 2 cut(s) | 504, 763 |
| BtsI | GCAGTG | 1 cut(s) | 835 |
| BtsIMutI | CAGTG | 3 cut(s) | 210, 290, 835 |
| CciI | TCATGA | 1 cut(s) | 556 |
| CfoI | GCGC | 1 cut(s) | 379 |
| Cfr13I | GGNCC | 2 cut(s) | 669, 670 |
| Csp6I | GTAC | 4 cut(s) | 84, 165, 260, 682 |
| CviAII | CATG | 7 cut(s) | 342, 464, 557, 591, 694, 754, 791 |
| CviJI | RGCY | 5 cut(s) | 25, 389, 629, 671, 752 |
| CviKI_1 | RGCY | 5 cut(s) | 25, 389, 629, 671, 752 |
| CviQI | GTAC | 4 cut(s) | 84, 165, 260, 682 |
| DdeI | CTNAG | 2 cut(s) | 282, 570 |
| DpnI | GATC | 4 cut(s) | 108, 432, 528, 707 |
| DpnII | GATC | 4 cut(s) | 106, 430, 526, 705 |
| DriI | GACNNNNNGTC | 1 cut(s) | 400 |
| Eam1104I | CTCTTC | 3 cut(s) | 478, 693, 849 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 400 |
| EarI | CTCTTC | 3 cut(s) | 478, 693, 849 |
| Eco130I | CCWWGG | 1 cut(s) | 753 |
| Eco24I | GRGCYC | 1 cut(s) | 673 |
| Eco57I | CTGAAG | 1 cut(s) | 435 |
| Eco88I | CYCGRG | 1 cut(s) | 624 |
| EcoO109I | RGGNCCY | 1 cut(s) | 669 |
| EcoRI | GAATTC | 1 cut(s) | 134 |
| EcoRII | CCWGG | 1 cut(s) | 265 |
| EcoT14I | CCWWGG | 1 cut(s) | 753 |
| EcoT22I | ATGCAT | 1 cut(s) | 343 |
| EcoT38I | GRGCYC | 1 cut(s) | 673 |
| ErhI | CCWWGG | 1 cut(s) | 753 |
| FaeI | CATG | 7 cut(s) | 345, 467, 560, 594, 697, 757, 794 |
| FatI | CATG | 7 cut(s) | 341, 463, 556, 590, 693, 753, 790 |
| FauNDI | CATATG | 2 cut(s) | 371, 784 |
| Fnu4HI | GCNGC | 2 cut(s) | 733, 807 |
| FokI | GGATG | 2 cut(s) | 491, 770 |
| FriOI | GRGCYC | 1 cut(s) | 673 |
| Fsp4HI | GCNGC | 2 cut(s) | 733, 807 |
| FspBI | CTAG | 1 cut(s) | 186 |
| GlaI | GCGC | 1 cut(s) | 378 |
| GluI | GCNGC | 2 cut(s) | 733, 807 |
| HaeIII | GGCC | 2 cut(s) | 671, 752 |
| HapII | CCGG | 1 cut(s) | 599 |
| HhaI | GCGC | 1 cut(s) | 379 |
| Hin1II | CATG | 7 cut(s) | 345, 467, 560, 594, 697, 757, 794 |
| Hin6I | GCGC | 1 cut(s) | 377 |
| HinP1I | GCGC | 1 cut(s) | 377 |
| HinfI | GANTC | 4 cut(s) | 182, 311, 521, 718 |
| HpaII | CCGG | 1 cut(s) | 599 |
| HphI | GGTGA | 3 cut(s) | 79, 521, 667 |
| Hpy166II | GTNNAC | 1 cut(s) | 9 |
| Hpy188I | TCNGA | 4 cut(s) | 55, 133, 526, 573 |
| Hpy188III | TCNNGA | 8 cut(s) | 104, 179, 392, 413, 434, 557, 581, 689 |
| Hpy8I | GTNNAC | 1 cut(s) | 9 |
| HpyAV | CCTTC | 2 cut(s) | 342, 646 |
| HpyCH4III | ACNGT | 3 cut(s) | 169, 455, 578 |
| HpyCH4IV | ACGT | 1 cut(s) | 561 |
| HpyCH4V | TGCA | 6 cut(s) | 18, 123, 150, 341, 594, 828 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 156, 374 |
| HpyF3I | CTNAG | 2 cut(s) | 282, 570 |
| HpySE526I | ACGT | 1 cut(s) | 561 |
| Hsp92II | CATG | 7 cut(s) | 345, 467, 560, 594, 697, 757, 794 |
| HspAI | GCGC | 1 cut(s) | 377 |
| Kzo9I | GATC | 4 cut(s) | 106, 430, 526, 705 |
| LmnI | GCTCC | 1 cut(s) | 30 |
| Lsp1109I | GCAGC | 2 cut(s) | 744, 818 |
| LweI | GCATC | 3 cut(s) | 159, 510, 635 |
| MaeI | CTAG | 1 cut(s) | 186 |
| MaeII | ACGT | 1 cut(s) | 561 |
| MaeIII | GTNAC | 2 cut(s) | 316, 327 |
| MalI | GATC | 4 cut(s) | 108, 432, 528, 707 |
| MbiI | CCGCTC | 1 cut(s) | 623 |
| MboI | GATC | 4 cut(s) | 106, 430, 526, 705 |
| MboII | GAAGA | 4 cut(s) | 428, 465, 670, 710 |
| MfeI | CAATTG | 2 cut(s) | 79, 154 |
| MflI | RGATCY | 2 cut(s) | 106, 430 |
| MhlI | GDGCHC | 2 cut(s) | 673, 679 |
| MlyI | GAGTC | 1 cut(s) | 305 |
| MmeI | TCCRAC | 2 cut(s) | 52, 750 |
| MnlI | CCTC | 8 cut(s) | 53, 217, 243, 291, 577, 579, 796, 826 |
| Mph1103I | ATGCAT | 1 cut(s) | 343 |
| MseI | TTAA | 1 cut(s) | 62 |
| MspI | CCGG | 1 cut(s) | 599 |
| MspR9I | CCNGG | 1 cut(s) | 267 |
| MunI | CAATTG | 2 cut(s) | 79, 154 |
| MvaI | CCWGG | 1 cut(s) | 267 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 156, 374 |
| NcoI | CCATGG | 1 cut(s) | 753 |
| NdeI | CATATG | 2 cut(s) | 371, 784 |
| NdeII | GATC | 4 cut(s) | 106, 430, 526, 705 |
| NlaIII | CATG | 7 cut(s) | 345, 467, 560, 594, 697, 757, 794 |
| NlaIV | GGNNCC | 3 cut(s) | 26, 670, 671 |
| NsiI | ATGCAT | 1 cut(s) | 343 |
| NspI | RCATGY | 2 cut(s) | 345, 594 |
| NspV | TTCGAA | 1 cut(s) | 615 |
| PaeR7I | CTCGAG | 1 cut(s) | 624 |
| PagI | TCATGA | 1 cut(s) | 556 |
| PfeI | GAWTC | 3 cut(s) | 182, 521, 718 |
| PfoI | TCCNGGA | 1 cut(s) | 265 |
| PkrI | GCNGC | 2 cut(s) | 734, 808 |
| PleI | GAGTC | 1 cut(s) | 305 |
| PpsI | GAGTC | 1 cut(s) | 305 |
| Psp6I | CCWGG | 1 cut(s) | 265 |
| PspGI | CCWGG | 1 cut(s) | 265 |
| PspN4I | GGNNCC | 3 cut(s) | 26, 670, 671 |
| PspOMI | GGGCCC | 1 cut(s) | 669 |
| PspPI | GGNCC | 2 cut(s) | 669, 670 |
| PspXI | VCTCGAGB | 1 cut(s) | 624 |
| PstI | CTGCAG | 1 cut(s) | 125 |
| PsuI | RGATCY | 2 cut(s) | 106, 430 |
| RsaI | GTAC | 4 cut(s) | 85, 166, 261, 683 |
| RsaNI | GTAC | 4 cut(s) | 84, 165, 260, 682 |
| SaqAI | TTAA | 1 cut(s) | 62 |
| SatI | GCNGC | 2 cut(s) | 733, 807 |
| Sau3AI | GATC | 4 cut(s) | 106, 430, 526, 705 |
| Sau96I | GGNCC | 2 cut(s) | 669, 670 |
| SchI | GAGTC | 1 cut(s) | 305 |
| ScrFI | CCNGG | 1 cut(s) | 267 |
| SduI | GDGCHC | 2 cut(s) | 673, 679 |
| SfaNI | GCATC | 3 cut(s) | 159, 510, 635 |
| SfcI | CTRYAG | 2 cut(s) | 121, 454 |
| Sfr274I | CTCGAG | 1 cut(s) | 624 |
| SfuI | TTCGAA | 1 cut(s) | 615 |
| SlaI | CTCGAG | 1 cut(s) | 624 |
| SmlI | CTYRAG | 4 cut(s) | 160, 390, 581, 624 |
| SmoI | CTYRAG | 4 cut(s) | 160, 390, 581, 624 |
| SsiI | CCGC | 2 cut(s) | 214, 621 |
| SspMI | CTAG | 1 cut(s) | 186 |
| StyD4I | CCNGG | 1 cut(s) | 265 |
| StyI | CCWWGG | 1 cut(s) | 753 |
| TaaI | ACNGT | 3 cut(s) | 169, 455, 578 |
| TaiI | ACGT | 1 cut(s) | 564 |
| TaqI | TCGA | 2 cut(s) | 615, 625 |
| TatI | WGTACW | 3 cut(s) | 83, 259, 681 |
| TfiI | GAWTC | 3 cut(s) | 182, 521, 718 |
| Tru1I | TTAA | 1 cut(s) | 62 |
| Tru9I | TTAA | 1 cut(s) | 62 |
| TscAI | CASTG | 3 cut(s) | 210, 290, 835 |
| TseI | GCWGC | 2 cut(s) | 732, 806 |
| TspDTI | ATGAA | 2 cut(s) | 731, 801 |
| TspGWI | ACGGA | 1 cut(s) | 390 |
| TspRI | CASTG | 3 cut(s) | 210, 290, 835 |
| XapI | RAATTY | 2 cut(s) | 134, 276 |
| XceI | RCATGY | 2 cut(s) | 345, 594 |
| XhoI | CTCGAG | 1 cut(s) | 624 |
| XspI | CTAG | 1 cut(s) | 186 |
| Zsp2I | ATGCAT | 1 cut(s) | 343 |