TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| C-JID | PF20160 | 46 - 87 | 1.2e-13 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 272 |
| AclI | AACGTT | 1 cut(s) | 67 |
| AclWI | GGATC | 1 cut(s) | 340 |
| AfaI | GTAC | 2 cut(s) | 84, 158 |
| AflII | CTTAAG | 1 cut(s) | 56 |
| AgsI | TTSAA | 2 cut(s) | 65, 307 |
| AjnI | CCWGG | 1 cut(s) | 202 |
| AleI | CACNNNNGTG | 1 cut(s) | 168 |
| AluBI | AGCT | 2 cut(s) | 18, 196 |
| AluI | AGCT | 2 cut(s) | 18, 196 |
| Alw26I | GTCTC | 1 cut(s) | 183 |
| AlwI | GGATC | 1 cut(s) | 340 |
| AoxI | GGCC | 1 cut(s) | 309 |
| ApeKI | GCWGC | 1 cut(s) | 196 |
| AsuHPI | GGTGA | 2 cut(s) | 155, 226 |
| BbsI | GAAGAC | 1 cut(s) | 272 |
| BbvI | GCAGC | 1 cut(s) | 183 |
| BccI | CCATC | 1 cut(s) | 220 |
| BciT130I | CCWGG | 1 cut(s) | 204 |
| BcoDI | GTCTC | 1 cut(s) | 183 |
| BfmI | CTRYAG | 1 cut(s) | 189 |
| BfrI | CTTAAG | 1 cut(s) | 56 |
| BisI | GCNGC | 1 cut(s) | 197 |
| BlsI | GCNGC | 1 cut(s) | 198 |
| Bme1390I | CCNGG | 1 cut(s) | 204 |
| BmrFI | CCNGG | 1 cut(s) | 204 |
| BmsI | GCATC | 1 cut(s) | 208 |
| BpiI | GAAGAC | 1 cut(s) | 272 |
| BsaI | GGTCTC | 1 cut(s) | 183 |
| Bse3DI | GCAATG | 1 cut(s) | 38 |
| BseBI | CCWGG | 1 cut(s) | 204 |
| BseGI | GGATG | 2 cut(s) | 199, 231 |
| BseMI | GCAATG | 1 cut(s) | 38 |
| BseMII | CTCAG | 1 cut(s) | 141 |
| BseRI | GAGGAG | 1 cut(s) | 248 |
| BseXI | GCAGC | 1 cut(s) | 183 |
| BshFI | GGCC | 1 cut(s) | 311 |
| BsmAI | GTCTC | 1 cut(s) | 183 |
| BsnI | GGCC | 1 cut(s) | 311 |
| Bso31I | GGTCTC | 1 cut(s) | 183 |
| Bsp143I | GATC | 2 cut(s) | 320, 332 |
| BspACI | CCGC | 1 cut(s) | 272 |
| BspANI | GGCC | 1 cut(s) | 311 |
| BspCNI | CTCAG | 1 cut(s) | 142 |
| BspPI | GGATC | 1 cut(s) | 340 |
| BspTI | CTTAAG | 1 cut(s) | 56 |
| BspTNI | GGTCTC | 1 cut(s) | 183 |
| BsrDI | GCAATG | 1 cut(s) | 38 |
| BssMI | GATC | 2 cut(s) | 320, 332 |
| Bst2UI | CCWGG | 1 cut(s) | 204 |
| Bst4CI | ACNGT | 2 cut(s) | 74, 190 |
| BstAFI | CTTAAG | 1 cut(s) | 56 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 297 |
| BstDEI | CTNAG | 1 cut(s) | 150 |
| BstF5I | GGATG | 2 cut(s) | 199, 231 |
| BstKTI | GATC | 2 cut(s) | 323, 335 |
| BstMAI | GTCTC | 1 cut(s) | 183 |
| BstMBI | GATC | 2 cut(s) | 320, 332 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 297 |
| BstNI | CCWGG | 1 cut(s) | 204 |
| BstSCI | CCNGG | 1 cut(s) | 202 |
| BstSFI | CTRYAG | 1 cut(s) | 189 |
| BstV1I | GCAGC | 1 cut(s) | 183 |
| BstV2I | GAAGAC | 1 cut(s) | 272 |
| BsuRI | GGCC | 1 cut(s) | 311 |
| BtsCI | GGATG | 2 cut(s) | 199, 231 |
| Csp6I | GTAC | 2 cut(s) | 83, 157 |
| CviJI | RGCY | 4 cut(s) | 18, 196, 255, 311 |
| CviKI_1 | RGCY | 4 cut(s) | 18, 196, 255, 311 |
| CviQI | GTAC | 2 cut(s) | 83, 157 |
| DdeI | CTNAG | 1 cut(s) | 150 |
| DpnI | GATC | 2 cut(s) | 322, 334 |
| DpnII | GATC | 2 cut(s) | 320, 332 |
| Eco31I | GGTCTC | 1 cut(s) | 183 |
| EcoRII | CCWGG | 1 cut(s) | 202 |
| FaiI | YATR | 4 cut(s) | 29, 96, 111, 347 |
| FauI | CCCGC | 1 cut(s) | 279 |
| Fnu4HI | GCNGC | 1 cut(s) | 197 |
| FokI | GGATG | 2 cut(s) | 186, 238 |
| Fsp4HI | GCNGC | 1 cut(s) | 197 |
| GluI | GCNGC | 1 cut(s) | 197 |
| HaeIII | GGCC | 1 cut(s) | 311 |
| HinfI | GANTC | 1 cut(s) | 231 |
| HphI | GGTGA | 2 cut(s) | 155, 226 |
| Hpy166II | GTNNAC | 1 cut(s) | 213 |
| Hpy188I | TCNGA | 2 cut(s) | 183, 354 |
| Hpy188III | TCNNGA | 1 cut(s) | 363 |
| Hpy8I | GTNNAC | 1 cut(s) | 213 |
| HpyAV | CCTTC | 2 cut(s) | 247, 301 |
| HpyCH4III | ACNGT | 2 cut(s) | 74, 190 |
| HpyCH4IV | ACGT | 2 cut(s) | 67, 356 |
| HpyCH4V | TGCA | 1 cut(s) | 199 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 297 |
| HpyF3I | CTNAG | 1 cut(s) | 150 |
| HpySE526I | ACGT | 2 cut(s) | 67, 356 |
| Kzo9I | GATC | 2 cut(s) | 320, 332 |
| LmnI | GCTCC | 1 cut(s) | 288 |
| LpnPI | CCDG | 3 cut(s) | 162, 189, 216 |
| Lsp1109I | GCAGC | 1 cut(s) | 183 |
| LweI | GCATC | 1 cut(s) | 208 |
| MaeII | ACGT | 2 cut(s) | 67, 356 |
| MaeIII | GTNAC | 1 cut(s) | 68 |
| MalI | GATC | 2 cut(s) | 322, 334 |
| MboI | GATC | 2 cut(s) | 320, 332 |
| MboII | GAAGA | 2 cut(s) | 69, 272 |
| MnlI | CCTC | 2 cut(s) | 266, 269 |
| MseI | TTAA | 1 cut(s) | 57 |
| MslI | CAYNNNNRTG | 1 cut(s) | 168 |
| MspCI | CTTAAG | 1 cut(s) | 56 |
| MspR9I | CCNGG | 1 cut(s) | 204 |
| MvaI | CCWGG | 1 cut(s) | 204 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 297 |
| NdeII | GATC | 2 cut(s) | 320, 332 |
| OliI | CACNNNNGTG | 1 cut(s) | 168 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 78 |
| PfeI | GAWTC | 1 cut(s) | 231 |
| PkrI | GCNGC | 1 cut(s) | 198 |
| Psp1406I | AACGTT | 1 cut(s) | 67 |
| Psp6I | CCWGG | 1 cut(s) | 202 |
| PspGI | CCWGG | 1 cut(s) | 202 |
| RsaI | GTAC | 2 cut(s) | 84, 158 |
| RsaNI | GTAC | 2 cut(s) | 83, 157 |
| RseI | CAYNNNNRTG | 1 cut(s) | 168 |
| SaqAI | TTAA | 1 cut(s) | 57 |
| SatI | GCNGC | 1 cut(s) | 197 |
| Sau3AI | GATC | 2 cut(s) | 320, 332 |
| ScrFI | CCNGG | 1 cut(s) | 204 |
| SfaNI | GCATC | 1 cut(s) | 208 |
| SfcI | CTRYAG | 1 cut(s) | 189 |
| SgeI | CNNG | 8 cut(s) | 60, 146, 161, 215, 216, 232, 283, 288 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 168 |
| SmlI | CTYRAG | 1 cut(s) | 56 |
| SmoI | CTYRAG | 1 cut(s) | 56 |
| SsiI | CCGC | 1 cut(s) | 272 |
| StyD4I | CCNGG | 1 cut(s) | 202 |
| TaaI | ACNGT | 2 cut(s) | 74, 190 |
| TaiI | ACGT | 2 cut(s) | 70, 359 |
| TfiI | GAWTC | 1 cut(s) | 231 |
| Tru1I | TTAA | 1 cut(s) | 57 |
| Tru9I | TTAA | 1 cut(s) | 57 |
| TseI | GCWGC | 1 cut(s) | 196 |
| TspDTI | ATGAA | 5 cut(s) | 27, 27, 78, 83, 156 |
| TspGWI | ACGGA | 1 cut(s) | 70 |
| Vha464I | CTTAAG | 1 cut(s) | 56 |