resistance protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 1527 |
| AccB1I | GGYRCC | 1 cut(s) | 1545 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1483, 1994 |
| AccBSI | CCGCTC | 1 cut(s) | 2175 |
| AccI | GTMKAC | 2 cut(s) | 1966, 2663 |
| AccII | CGCG | 5 cut(s) | 708, 1640, 2337, 2921, 3333 |
| AciI | CCGC | 7 cut(s) | 1640, 2175, 2693, 2921, 3278, 3333, 3340 |
| AclWI | GGATC | 4 cut(s) | 223, 338, 849, 862 |
| AcoI | YGGCCR | 2 cut(s) | 3240, 3250 |
| AcuI | CTGAAG | 1 cut(s) | 2540 |
| AcyI | GRCGYC | 2 cut(s) | 1546, 2502 |
| AdeI | CACNNNGTG | 1 cut(s) | 3198 |
| AfaI | GTAC | 4 cut(s) | 5, 357, 500, 3067 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 264, 1483, 1555, 1994, 2211 |
| AflII | CTTAAG | 1 cut(s) | 1070 |
| AflIII | ACRYGT | 2 cut(s) | 1207, 1815 |
| AjnI | CCWGG | 4 cut(s) | 1522, 2776, 2887, 2943 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1214, 1246 |
| Alw21I | GWGCWC | 2 cut(s) | 133, 1638 |
| Alw26I | GTCTC | 3 cut(s) | 1669, 2509, 2690 |
| Alw44I | GTGCAC | 1 cut(s) | 1634 |
| AlwI | GGATC | 4 cut(s) | 223, 338, 849, 862 |
| Ama87I | CYCGRG | 1 cut(s) | 2792 |
| AoxI | GGCC | 3 cut(s) | 1625, 3240, 3250 |
| ApaLI | GTGCAC | 1 cut(s) | 1634 |
| ApeKI | GCWGC | 7 cut(s) | 203, 1533, 2106, 2356, 2439, 3053, 3342 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 763, 795 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 19, 1316 |
| AspLEI | GCGC | 2 cut(s) | 1548, 3333 |
| AspS9I | GGNCC | 3 cut(s) | 1625, 2255, 3336 |
| AsuC2I | CCSGG | 1 cut(s) | 1916 |
| AsuHPI | GGTGA | 4 cut(s) | 92, 2253, 2946, 3104 |
| AsuII | TTCGAA | 1 cut(s) | 170 |
| AvaI | CYCGRG | 1 cut(s) | 2792 |
| AvaII | GGWCC | 2 cut(s) | 2255, 3336 |
| BaeGI | GKGCMC | 1 cut(s) | 1638 |
| BalI | TGGCCA | 1 cut(s) | 3252 |
| BamHI | GGATCC | 1 cut(s) | 854 |
| BanI | GGYRCC | 1 cut(s) | 1545 |
| BanII | GRGCYC | 1 cut(s) | 133 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 306, 338 |
| BbsI | GAAGAC | 2 cut(s) | 1154, 1210 |
| Bbv12I | GWGCWC | 2 cut(s) | 133, 1638 |
| BbvI | GCAGC | 7 cut(s) | 190, 1545, 2093, 2343, 2426, 3065, 3354 |
| BccI | CCATC | 9 cut(s) | 40, 355, 1151, 1477, 1748, 1996, 2266, 2738, 2905 |
| BceAI | ACGGC | 3 cut(s) | 2515, 3066, 3255 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 798, 832 |
| BciT130I | CCWGG | 4 cut(s) | 1524, 2778, 2889, 2945 |
| BciVI | GTATCC | 2 cut(s) | 1770, 2874 |
| BclI | TGATCA | 1 cut(s) | 3109 |
| BcnI | CCSGG | 1 cut(s) | 1916 |
| BcoDI | GTCTC | 3 cut(s) | 1669, 2509, 2690 |
| BfoI | RGCGCY | 1 cut(s) | 1549 |
| BfrI | CTTAAG | 1 cut(s) | 1070 |
| BfuAI | ACCTGC | 1 cut(s) | 1527 |
| BfuI | GTATCC | 2 cut(s) | 1770, 2874 |
| BglII | AGATCT | 2 cut(s) | 1246, 2464 |
| BisI | GCNGC | 8 cut(s) | 204, 1534, 2107, 2357, 2440, 3054, 3279, 3343 |
| BlpI | GCTNAGC | 1 cut(s) | 1886 |
| BlsI | GCNGC | 8 cut(s) | 205, 1535, 2108, 2358, 2441, 3055, 3280, 3344 |
| Bme1390I | CCNGG | 5 cut(s) | 1524, 1916, 2778, 2889, 2945 |
| Bme18I | GGWCC | 2 cut(s) | 2255, 3336 |
| BmeT110I | CYCGRG | 1 cut(s) | 2792 |
| BmgT120I | GGNCC | 3 cut(s) | 1625, 2255, 3336 |
| BmiI | GGNNCC | 6 cut(s) | 856, 1547, 2574, 2635, 3337, 3338 |
| BmrFI | CCNGG | 5 cut(s) | 1524, 1916, 2778, 2889, 2945 |
| BmrI | ACTGGG | 1 cut(s) | 1632 |
| BmsI | GCATC | 6 cut(s) | 263, 439, 1452, 1474, 1633, 2059 |
| BmuI | ACTGGG | 1 cut(s) | 1632 |
| BpiI | GAAGAC | 2 cut(s) | 1154, 1210 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 701, 733, 703, 735 |
| BpmI | CTGGAG | 1 cut(s) | 210 |
| Bpu10I | CCTNAGC | 2 cut(s) | 489, 2435 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1886 |
| Bpu14I | TTCGAA | 1 cut(s) | 170 |
| BpuEI | CTTGAG | 6 cut(s) | 117, 580, 767, 1591, 1961, 2996 |
| BpuMI | CCSGG | 1 cut(s) | 1916 |
| Bsa29I | ATCGAT | 2 cut(s) | 528, 818 |
| BsaAI | YACGTR | 1 cut(s) | 3059 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1758, 2409 |
| BsaHI | GRCGYC | 2 cut(s) | 1546, 2502 |
| BsaJI | CCNNGG | 4 cut(s) | 1611, 1914, 1993, 3253 |
| BsaWI | WCCGGW | 1 cut(s) | 2369 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 3249, 3279 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 264, 1483, 1555, 1994, 2211 |
| Bse1I | ACTGG | 5 cut(s) | 500, 1627, 1628, 2479, 2650 |
| Bse3DI | GCAATG | 2 cut(s) | 1326, 2149 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1758, 2409 |
| BseBI | CCWGG | 4 cut(s) | 1524, 2778, 2889, 2945 |
| BseCI | ATCGAT | 2 cut(s) | 528, 818 |
| BseDI | CCNNGG | 4 cut(s) | 1611, 1914, 1993, 3253 |
| BseJI | GATNNNNATC | 2 cut(s) | 1758, 2409 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 264, 1483, 1555, 1994, 2211 |
| BseMI | GCAATG | 2 cut(s) | 1326, 2149 |
| BseMII | CTCAG | 8 cut(s) | 82, 594, 936, 1664, 1900, 2030, 3161, 3351 |
| BseNI | ACTGG | 5 cut(s) | 500, 1627, 1628, 2479, 2650 |
| BseRI | GAGGAG | 2 cut(s) | 2174, 2961 |
| BseSI | GKGCMC | 1 cut(s) | 1638 |
| BseXI | GCAGC | 7 cut(s) | 190, 1545, 2093, 2343, 2426, 3065, 3354 |
| BsgI | GTGCAG | 1 cut(s) | 648 |
| Bsh1236I | CGCG | 5 cut(s) | 708, 1640, 2337, 2921, 3333 |
| Bsh1285I | CGRYCG | 1 cut(s) | 2663 |
| BshFI | GGCC | 3 cut(s) | 1627, 3242, 3252 |
| BshNI | GGYRCC | 1 cut(s) | 1545 |
| BshVI | ATCGAT | 2 cut(s) | 528, 818 |
| BsiEI | CGRYCG | 1 cut(s) | 2663 |
| BsiHKAI | GWGCWC | 2 cut(s) | 133, 1638 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2792 |
| BsiSI | CCGG | 2 cut(s) | 1916, 2370 |
| BslFI | GGGAC | 4 cut(s) | 1282, 2408, 2738, 3349 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 264, 1483, 1555, 1994, 2211 |
| BsmAI | GTCTC | 3 cut(s) | 1669, 2509, 2690 |
| BsmBI | CGTCTC | 2 cut(s) | 2509, 2690 |
| BsmFI | GGGAC | 4 cut(s) | 1282, 2408, 2738, 3349 |
| BsmI | GAATGC | 1 cut(s) | 2004 |
| BsnI | GGCC | 3 cut(s) | 1627, 3242, 3252 |
| BsoBI | CYCGRG | 1 cut(s) | 2792 |
| Bsp119I | TTCGAA | 1 cut(s) | 170 |
| Bsp1286I | GDGCHC | 2 cut(s) | 133, 1638 |
| Bsp1407I | TGTACA | 1 cut(s) | 3 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1886 |
| Bsp19I | CCATGG | 2 cut(s) | 1611, 3253 |
| Bsp68I | TCGCGA | 1 cut(s) | 708 |
| BspACI | CCGC | 7 cut(s) | 1640, 2175, 2693, 2921, 3278, 3333, 3340 |
| BspANI | GGCC | 3 cut(s) | 1627, 3242, 3252 |
| BspCNI | CTCAG | 8 cut(s) | 81, 593, 935, 1665, 1899, 2029, 3160, 3352 |
| BspDI | ATCGAT | 2 cut(s) | 528, 818 |
| BspFNI | CGCG | 5 cut(s) | 708, 1640, 2337, 2921, 3333 |
| BspHI | TCATGA | 2 cut(s) | 847, 1057 |
| BspLI | GGNNCC | 6 cut(s) | 856, 1547, 2574, 2635, 3337, 3338 |
| BspMI | ACCTGC | 1 cut(s) | 1527 |
| BspPI | GGATC | 4 cut(s) | 223, 338, 849, 862 |
| BspQI | GCTCTTC | 1 cut(s) | 3303 |
| BspT104I | TTCGAA | 1 cut(s) | 170 |
| BspT107I | GGYRCC | 1 cut(s) | 1545 |
| BspTI | CTTAAG | 1 cut(s) | 1070 |
| BsrBI | CCGCTC | 1 cut(s) | 2175 |
| BsrDI | GCAATG | 2 cut(s) | 1326, 2149 |
| BsrGI | TGTACA | 1 cut(s) | 3 |
| BsrI | ACTGG | 5 cut(s) | 500, 1627, 1628, 2479, 2650 |
| BssECI | CCNNGG | 4 cut(s) | 1611, 1914, 1993, 3253 |
| BssNI | GRCGYC | 2 cut(s) | 1546, 2502 |
| BssT1I | CCWWGG | 3 cut(s) | 1611, 1993, 3253 |
| Bst2UI | CCWGG | 4 cut(s) | 1524, 2778, 2889, 2945 |
| Bst4CI | ACNGT | 6 cut(s) | 1226, 1261, 1382, 2230, 2606, 2661 |
| Bst6I | CTCTTC | 2 cut(s) | 1548, 3303 |
| BstACI | GRCGYC | 2 cut(s) | 1546, 2502 |
| BstAFI | CTTAAG | 1 cut(s) | 1070 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1471 |
| BstAUI | TGTACA | 1 cut(s) | 3 |
| BstBAI | YACGTR | 1 cut(s) | 3059 |
| BstBI | TTCGAA | 1 cut(s) | 170 |
| BstC8I | GCNNGC | 3 cut(s) | 1562, 1638, 3099 |
| BstDSI | CCRYGG | 2 cut(s) | 1611, 3253 |
| BstFNI | CGCG | 5 cut(s) | 708, 1640, 2337, 2921, 3333 |
| BstH2I | RGCGCY | 1 cut(s) | 1549 |
| BstHHI | GCGC | 2 cut(s) | 1548, 3333 |
| BstMAI | GTCTC | 3 cut(s) | 1669, 2509, 2690 |
| BstMCI | CGRYCG | 1 cut(s) | 2663 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 314, 464, 1471, 1633, 2353, 3339, 3351 |
| BstNI | CCWGG | 4 cut(s) | 1524, 2778, 2889, 2945 |
| BstNSI | RCATGY | 4 cut(s) | 1211, 1401, 1568, 1819 |
| BstSCI | CCNGG | 5 cut(s) | 1522, 1914, 2776, 2887, 2943 |
| BstSLI | GKGCMC | 1 cut(s) | 1638 |
| BstUI | CGCG | 5 cut(s) | 708, 1640, 2337, 2921, 3333 |
| BstV1I | GCAGC | 7 cut(s) | 190, 1545, 2093, 2343, 2426, 3065, 3354 |
| BstV2I | GAAGAC | 2 cut(s) | 1154, 1210 |
| BstX2I | RGATCY | 3 cut(s) | 854, 1246, 2464 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2137 |
| BstYI | RGATCY | 3 cut(s) | 854, 1246, 2464 |
| Bsu15I | ATCGAT | 2 cut(s) | 528, 818 |
| BsuI | GTATCC | 2 cut(s) | 1770, 2874 |
| BsuRI | GGCC | 3 cut(s) | 1627, 3242, 3252 |
| BsuTUI | ATCGAT | 2 cut(s) | 528, 818 |
| BtgI | CCRYGG | 2 cut(s) | 1611, 3253 |
| BtsI | GCAGTG | 1 cut(s) | 324 |
| BtsIMutI | CAGTG | 5 cut(s) | 324, 763, 1231, 1635, 2657 |
| BtuMI | TCGCGA | 1 cut(s) | 708 |
| BveI | ACCTGC | 1 cut(s) | 1527 |
| Cac8I | GCNNGC | 3 cut(s) | 1562, 1638, 3099 |
| CciI | TCATGA | 2 cut(s) | 847, 1057 |
| CfoI | GCGC | 2 cut(s) | 1548, 3333 |
| Cfr13I | GGNCC | 3 cut(s) | 1625, 2255, 3336 |
| ClaI | ATCGAT | 2 cut(s) | 528, 818 |
| CseI | GACGC | 4 cut(s) | 1073, 1601, 2491, 2707 |
| Csp6I | GTAC | 4 cut(s) | 4, 356, 499, 3066 |
| CviQI | GTAC | 4 cut(s) | 4, 356, 499, 3066 |
| DinI | GGCGCC | 1 cut(s) | 1547 |
| DraI | TTTAAA | 1 cut(s) | 1899 |
| DraIII | CACNNNGTG | 1 cut(s) | 3198 |
| EaeI | YGGCCR | 2 cut(s) | 3240, 3250 |
| Eam1104I | CTCTTC | 2 cut(s) | 1548, 3303 |
| EarI | CTCTTC | 2 cut(s) | 1548, 3303 |
| Ecl136II | GAGCTC | 1 cut(s) | 131 |
| Eco130I | CCWWGG | 3 cut(s) | 1611, 1993, 3253 |
| Eco24I | GRGCYC | 1 cut(s) | 133 |
| Eco32I | GATATC | 1 cut(s) | 816 |
| Eco47I | GGWCC | 2 cut(s) | 2255, 3336 |
| Eco53kI | GAGCTC | 1 cut(s) | 131 |
| Eco57I | CTGAAG | 1 cut(s) | 2540 |
| Eco88I | CYCGRG | 1 cut(s) | 2792 |
| EcoICRI | GAGCTC | 1 cut(s) | 131 |
| EcoO109I | RGGNCCY | 1 cut(s) | 3336 |
| EcoRI | GAATTC | 1 cut(s) | 731 |
| EcoRII | CCWGG | 4 cut(s) | 1522, 2776, 2887, 2943 |
| EcoRV | GATATC | 1 cut(s) | 816 |
| EcoT14I | CCWWGG | 3 cut(s) | 1611, 1993, 3253 |
| EcoT22I | ATGCAT | 3 cut(s) | 256, 454, 1467 |
| EcoT38I | GRGCYC | 1 cut(s) | 133 |
| EgeI | GGCGCC | 1 cut(s) | 1547 |
| EheI | GGCGCC | 1 cut(s) | 1547 |
| ErhI | CCWWGG | 3 cut(s) | 1611, 1993, 3253 |
| Esp3I | CGTCTC | 2 cut(s) | 2509, 2690 |
| FalI | AAGNNNNNCTT | 3 cut(s) | 36, 1553, 1585 |
| FaqI | GGGAC | 4 cut(s) | 1282, 2408, 2738, 3349 |
| FauI | CCCGC | 2 cut(s) | 3326, 3347 |
| FbaI | TGATCA | 1 cut(s) | 3109 |
| FblI | GTMKAC | 2 cut(s) | 1966, 2663 |
| Fnu4HI | GCNGC | 8 cut(s) | 204, 1534, 2107, 2357, 2440, 3054, 3279, 3343 |
| FriOI | GRGCYC | 1 cut(s) | 133 |
| Fsp4HI | GCNGC | 8 cut(s) | 204, 1534, 2107, 2357, 2440, 3054, 3279, 3343 |
| GlaI | GCGC | 2 cut(s) | 1547, 3332 |
| GluI | GCNGC | 8 cut(s) | 204, 1534, 2107, 2357, 2440, 3054, 3279, 3343 |
| GsuI | CTGGAG | 1 cut(s) | 210 |
| HaeII | RGCGCY | 1 cut(s) | 1549 |
| HaeIII | GGCC | 3 cut(s) | 1627, 3242, 3252 |
| HapII | CCGG | 2 cut(s) | 1916, 2370 |
| HgaI | GACGC | 4 cut(s) | 1073, 1601, 2491, 2707 |
| HhaI | GCGC | 2 cut(s) | 1548, 3333 |
| Hin1I | GRCGYC | 2 cut(s) | 1546, 2502 |
| Hin6I | GCGC | 2 cut(s) | 1546, 3331 |
| HinP1I | GCGC | 2 cut(s) | 1546, 3331 |
| HincII | GTYRAC | 5 cut(s) | 1437, 1909, 1984, 2599, 2664 |
| HindII | GTYRAC | 5 cut(s) | 1437, 1909, 1984, 2599, 2664 |
| HindIII | AAGCTT | 2 cut(s) | 1073, 1856 |
| HinfI | GANTC | 9 cut(s) | 138, 593, 714, 920, 1835, 1951, 2916, 3089, 3368 |
| HpaI | GTTAAC | 2 cut(s) | 1437, 2599 |
| HpaII | CCGG | 2 cut(s) | 1916, 2370 |
| HphI | GGTGA | 4 cut(s) | 92, 2253, 2946, 3104 |
| HpyCH4III | ACNGT | 6 cut(s) | 1226, 1261, 1382, 2230, 2606, 2661 |
| HpyCH4IV | ACGT | 4 cut(s) | 550, 1048, 2884, 3058 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 314, 464, 1471, 1633, 2353, 3339, 3351 |
| HpySE526I | ACGT | 4 cut(s) | 550, 1048, 2884, 3058 |
| Hsp92I | GRCGYC | 2 cut(s) | 1546, 2502 |
| HspAI | GCGC | 2 cut(s) | 1546, 3331 |
| KasI | GGCGCC | 1 cut(s) | 1545 |
| KflI | GGGWCCC | 1 cut(s) | 3336 |
| Ksp22I | TGATCA | 1 cut(s) | 3109 |
| KspAI | GTTAAC | 2 cut(s) | 1437, 2599 |
| LguI | GCTCTTC | 1 cut(s) | 3303 |
| LmnI | GCTCC | 3 cut(s) | 1479, 2161, 2878 |
| Lsp1109I | GCAGC | 7 cut(s) | 190, 1545, 2093, 2343, 2426, 3065, 3354 |
| LweI | GCATC | 6 cut(s) | 263, 439, 1452, 1474, 1633, 2059 |
| MaeII | ACGT | 4 cut(s) | 550, 1048, 2884, 3058 |
| MaeIII | GTNAC | 5 cut(s) | 881, 913, 1283, 1826, 3137 |
| MbiI | CCGCTC | 1 cut(s) | 2175 |
| MfeI | CAATTG | 1 cut(s) | 609 |
| MflI | RGATCY | 3 cut(s) | 854, 1246, 2464 |
| MhlI | GDGCHC | 2 cut(s) | 133, 1638 |
| MlsI | TGGCCA | 1 cut(s) | 3252 |
| MluNI | TGGCCA | 1 cut(s) | 3252 |
| Mly113I | GGCGCC | 1 cut(s) | 1546 |
| MlyI | GAGTC | 3 cut(s) | 587, 914, 3098 |
| MmeI | TCCRAC | 2 cut(s) | 565, 1064 |
| Mox20I | TGGCCA | 1 cut(s) | 3252 |
| Mph1103I | ATGCAT | 3 cut(s) | 256, 454, 1467 |
| MroXI | GAANNNNTTC | 2 cut(s) | 19, 1316 |
| MscI | TGGCCA | 1 cut(s) | 3252 |
| MslI | CAYNNNNRTG | 4 cut(s) | 46, 114, 1212, 1641 |
| Msp20I | TGGCCA | 1 cut(s) | 3252 |
| MspCI | CTTAAG | 1 cut(s) | 1070 |
| MspI | CCGG | 2 cut(s) | 1916, 2370 |
| MspR9I | CCNGG | 5 cut(s) | 1524, 1916, 2778, 2889, 2945 |
| MunI | CAATTG | 1 cut(s) | 609 |
| Mva1269I | GAATGC | 1 cut(s) | 2004 |
| MvaI | CCWGG | 4 cut(s) | 1524, 2778, 2889, 2945 |
| MvnI | CGCG | 5 cut(s) | 708, 1640, 2337, 2921, 3333 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 314, 464, 1471, 1633, 2353, 3339, 3351 |
| NarI | GGCGCC | 1 cut(s) | 1546 |
| NciI | CCSGG | 1 cut(s) | 1916 |
| NcoI | CCATGG | 2 cut(s) | 1611, 3253 |
| NlaIV | GGNNCC | 6 cut(s) | 856, 1547, 2574, 2635, 3337, 3338 |
| NmuCI | GTSAC | 4 cut(s) | 881, 913, 1826, 3137 |
| NruI | TCGCGA | 1 cut(s) | 708 |
| NsiI | ATGCAT | 3 cut(s) | 256, 454, 1467 |
| NspI | RCATGY | 4 cut(s) | 1211, 1401, 1568, 1819 |
| NspV | TTCGAA | 1 cut(s) | 170 |
| PagI | TCATGA | 2 cut(s) | 847, 1057 |
| PciI | ACATGT | 2 cut(s) | 1207, 1815 |
| PciSI | GCTCTTC | 1 cut(s) | 3303 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 824 |
| PctI | GAATGC | 1 cut(s) | 2004 |
| PdmI | GAANNNNTTC | 2 cut(s) | 19, 1316 |
| PfeI | GAWTC | 6 cut(s) | 138, 714, 1835, 1951, 2916, 3368 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1483, 1994 |
| PfoI | TCCNGGA | 2 cut(s) | 2776, 2943 |
| PkrI | GCNGC | 8 cut(s) | 205, 1535, 2108, 2358, 2441, 3055, 3280, 3344 |
| PleI | GAGTC | 3 cut(s) | 587, 914, 3097 |
| PluTI | GGCGCC | 1 cut(s) | 1549 |
| PpsI | GAGTC | 3 cut(s) | 587, 914, 3097 |
| Ppu21I | YACGTR | 1 cut(s) | 3059 |
| PpuMI | RGGWCCY | 1 cut(s) | 3336 |
| PscI | ACATGT | 2 cut(s) | 1207, 1815 |
| Psp124BI | GAGCTC | 1 cut(s) | 133 |
| Psp5II | RGGWCCY | 1 cut(s) | 3336 |
| Psp6I | CCWGG | 4 cut(s) | 1522, 2776, 2887, 2943 |
| PspGI | CCWGG | 4 cut(s) | 1522, 2776, 2887, 2943 |
| PspN4I | GGNNCC | 6 cut(s) | 856, 1547, 2574, 2635, 3337, 3338 |
| PspPI | GGNCC | 3 cut(s) | 1625, 2255, 3336 |
| PspPPI | RGGWCCY | 1 cut(s) | 3336 |
| PsuI | RGATCY | 3 cut(s) | 854, 1246, 2464 |
| RruI | TCGCGA | 1 cut(s) | 708 |
| RsaI | GTAC | 4 cut(s) | 5, 357, 500, 3067 |
| RsaNI | GTAC | 4 cut(s) | 4, 356, 499, 3066 |
| RseI | CAYNNNNRTG | 4 cut(s) | 46, 114, 1212, 1641 |
| SacI | GAGCTC | 1 cut(s) | 133 |
| SalI | GTCGAC | 1 cut(s) | 2662 |
| SapI | GCTCTTC | 1 cut(s) | 3303 |
| SatI | GCNGC | 8 cut(s) | 204, 1534, 2107, 2357, 2440, 3054, 3279, 3343 |
| Sau96I | GGNCC | 3 cut(s) | 1625, 2255, 3336 |
| SchI | GAGTC | 3 cut(s) | 587, 914, 3098 |
| ScrFI | CCNGG | 5 cut(s) | 1524, 1916, 2778, 2889, 2945 |
| SduI | GDGCHC | 2 cut(s) | 133, 1638 |
| SfaNI | GCATC | 6 cut(s) | 263, 439, 1452, 1474, 1633, 2059 |
| SfoI | GGCGCC | 1 cut(s) | 1547 |
| SfuI | TTCGAA | 1 cut(s) | 170 |
| SinI | GGWCC | 2 cut(s) | 2255, 3336 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 46, 114, 1212, 1641 |
| SmlI | CTYRAG | 7 cut(s) | 132, 595, 746, 1070, 1570, 1940, 2975 |
| SmoI | CTYRAG | 7 cut(s) | 132, 595, 746, 1070, 1570, 1940, 2975 |
| SsiI | CCGC | 7 cut(s) | 1640, 2175, 2693, 2921, 3278, 3333, 3340 |
| SspDI | GGCGCC | 1 cut(s) | 1545 |
| SspI | AATATT | 1 cut(s) | 1772 |
| SstI | GAGCTC | 1 cut(s) | 133 |
| StyD4I | CCNGG | 5 cut(s) | 1522, 1914, 2776, 2887, 2943 |
| StyI | CCWWGG | 3 cut(s) | 1611, 1993, 3253 |
| TaaI | ACNGT | 6 cut(s) | 1226, 1261, 1382, 2230, 2606, 2661 |
| TaiI | ACGT | 4 cut(s) | 553, 1051, 2887, 3061 |
| TaqI | TCGA | 9 cut(s) | 170, 528, 636, 818, 906, 1360, 1504, 2118, 2663 |
| TaqII | GACCGA | 1 cut(s) | 932 |
| TatI | WGTACW | 1 cut(s) | 3 |
| TauI | GCSGC | 1 cut(s) | 3281 |
| TfiI | GAWTC | 6 cut(s) | 138, 714, 1835, 1951, 2916, 3368 |
| TscAI | CASTG | 5 cut(s) | 324, 763, 1231, 1635, 2657 |
| TseFI | GTSAC | 4 cut(s) | 881, 913, 1826, 3137 |
| TseI | GCWGC | 7 cut(s) | 203, 1533, 2106, 2356, 2439, 3053, 3342 |
| Tsp45I | GTSAC | 4 cut(s) | 881, 913, 1826, 3137 |
| TspGWI | ACGGA | 1 cut(s) | 2173 |
| TspRI | CASTG | 5 cut(s) | 324, 763, 1231, 1635, 2657 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1483, 1994 |
| Vha464I | CTTAAG | 1 cut(s) | 1070 |
| VneI | GTGCAC | 1 cut(s) | 1634 |
| VpaK11BI | GGWCC | 2 cut(s) | 2255, 3336 |
| XbaI | TCTAGA | 2 cut(s) | 1294, 2516 |
| XceI | RCATGY | 4 cut(s) | 1211, 1401, 1568, 1819 |
| XmiI | GTMKAC | 2 cut(s) | 1966, 2663 |
| XmnI | GAANNNNTTC | 2 cut(s) | 19, 1316 |
| Zsp2I | ATGCAT | 3 cut(s) | 256, 454, 1467 |