Belongs to the disease resistance NB-LRR family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 19 - 180 | 1e-52 | TIR domain |
| TIR_2 | PF13676 | 20 - 114 | 1.2e-14 | TIR domain |
| NB-ARC | PF00931 | 203 - 360 | 6.7e-20 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 428 - 497 | 2.5e-17 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_3 | PF07725 | 603 - 622 | 6e-06 | Leucine Rich Repeat |
| LRR_14 | PF23598 | 660 - 795 | 6.4e-11 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 694 - 777 | 1.5e-08 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_RPS2 | PF23247 | 764 - 882 | 9.5e-06 | Plant disease resistance protein RPS2-like, leucine-rich repeats |
| LRR_13 | PF23286 | 786 - 869 | 5.1e-06 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_8 | PF13855 | 809 - 865 | 6.2e-06 | Leucine rich repeat |
| LRR_14 | PF23598 | 810 - 862 | 1.1e-06 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 854 - 1059 | 3e-10 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 860 - 943 | 1.6e-13 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 956 - 1018 | 1.5e-09 | Leucine-rich repeat region |
| C-JID | PF20160 | 1083 - 1218 | 3.3e-11 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1323 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 2778 |
| AatII | GACGTC | 1 cut(s) | 2326 |
| Acc36I | ACCTGC | 2 cut(s) | 1324, 3548 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1981, 3289 |
| AciI | CCGC | 3 cut(s) | 2982, 3617, 3641 |
| AcuI | CTGAAG | 2 cut(s) | 1554, 3422 |
| AcyI | GRCGYC | 1 cut(s) | 2323 |
| AfaI | GTAC | 6 cut(s) | 315, 1207, 2176, 2601, 3386, 3645 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 1981, 2056, 2308, 2856, 3289 |
| AflIII | ACRYGT | 2 cut(s) | 2343, 3498 |
| AhlI | ACTAGT | 1 cut(s) | 3106 |
| AjiI | CACGTC | 1 cut(s) | 3546 |
| AjnI | CCWGG | 2 cut(s) | 3002, 3250 |
| Alw21I | GWGCWC | 3 cut(s) | 279, 2755, 2878 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1870, 3540 |
| Ama87I | CYCGRG | 2 cut(s) | 2603, 3837 |
| AoxI | GGCC | 1 cut(s) | 1720 |
| ApeKI | GCWGC | 6 cut(s) | 251, 440, 1376, 2640, 3096, 3185 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 565, 2466, 2807 |
| AspLEI | GCGC | 1 cut(s) | 3190 |
| AspS9I | GGNCC | 3 cut(s) | 941, 2502, 3293 |
| AsuC2I | CCSGG | 1 cut(s) | 945 |
| AsuHPI | GGTGA | 7 cut(s) | 383, 464, 931, 2992, 3194, 3272, 3509 |
| AsuII | TTCGAA | 1 cut(s) | 619 |
| AsuNHI | GCTAGC | 1 cut(s) | 3158 |
| AvaI | CYCGRG | 2 cut(s) | 2603, 3837 |
| AvaII | GGWCC | 3 cut(s) | 941, 2502, 3293 |
| BaeGI | GKGCMC | 1 cut(s) | 2283 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 297, 297, 330, 330 |
| BamHI | GGATCC | 2 cut(s) | 1528, 1860 |
| BanII | GRGCYC | 2 cut(s) | 279, 2878 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1068, 1100 |
| BauI | CACGAG | 3 cut(s) | 2412, 2422, 3066 |
| BbsI | GAAGAC | 5 cut(s) | 358, 1133, 1542, 2164, 2774 |
| Bbv12I | GWGCWC | 3 cut(s) | 279, 2755, 2878 |
| BbvI | GCAGC | 6 cut(s) | 263, 427, 1363, 2627, 3083, 3197 |
| BceAI | ACGGC | 2 cut(s) | 2193, 3011 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 940, 974 |
| BciT130I | CCWGG | 2 cut(s) | 3004, 3252 |
| BciVI | GTATCC | 2 cut(s) | 1760, 3483 |
| BcnI | CCSGG | 1 cut(s) | 945 |
| BcuI | ACTAGT | 1 cut(s) | 3106 |
| BfmI | CTRYAG | 3 cut(s) | 164, 584, 600 |
| BfuAI | ACCTGC | 2 cut(s) | 1324, 3548 |
| BfuI | GTATCC | 2 cut(s) | 1760, 3483 |
| BglII | AGATCT | 1 cut(s) | 896 |
| BisI | GCNGC | 6 cut(s) | 252, 441, 1377, 2641, 3097, 3186 |
| BlsI | GCNGC | 6 cut(s) | 253, 442, 1378, 2642, 3098, 3187 |
| BmcAI | AGTACT | 1 cut(s) | 1207 |
| Bme1390I | CCNGG | 3 cut(s) | 945, 3004, 3252 |
| Bme18I | GGWCC | 3 cut(s) | 941, 2502, 3293 |
| BmeT110I | CYCGRG | 2 cut(s) | 2603, 3837 |
| BmgBI | CACGTC | 1 cut(s) | 3546 |
| BmgT120I | GGNCC | 3 cut(s) | 941, 2502, 3293 |
| BmiI | GGNNCC | 5 cut(s) | 214, 1168, 1530, 1862, 3294 |
| BmrFI | CCNGG | 3 cut(s) | 945, 3004, 3252 |
| BmtI | GCTAGC | 1 cut(s) | 3162 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1542 |
| BpiI | GAAGAC | 5 cut(s) | 358, 1133, 1542, 2164, 2774 |
| BpmI | CTGGAG | 4 cut(s) | 199, 1031, 1970, 2802 |
| Bpu10I | CCTNAGC | 3 cut(s) | 189, 2498, 2885 |
| Bpu14I | TTCGAA | 1 cut(s) | 619 |
| BpuEI | CTTGAG | 7 cut(s) | 2039, 2101, 2348, 2564, 2665, 2735, 2890 |
| BpuMI | CCSGG | 1 cut(s) | 945 |
| BsaBI | GATNNNNATC | 2 cut(s) | 159, 3717 |
| BsaHI | GRCGYC | 1 cut(s) | 2323 |
| BsaI | GGTCTC | 3 cut(s) | 241, 2293, 3077 |
| BsaJI | CCNNGG | 4 cut(s) | 994, 2505, 2756, 3549 |
| BsaWI | WCCGGW | 1 cut(s) | 2542 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 69, 99 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 1981, 2056, 2308, 2856, 3289 |
| Bse1I | ACTGG | 4 cut(s) | 934, 1152, 2730, 3824 |
| Bse3DI | GCAATG | 2 cut(s) | 709, 3047 |
| Bse8I | GATNNNNATC | 2 cut(s) | 159, 3717 |
| BseBI | CCWGG | 2 cut(s) | 3004, 3252 |
| BseDI | CCNNGG | 4 cut(s) | 994, 2505, 2756, 3549 |
| BseJI | GATNNNNATC | 2 cut(s) | 159, 3717 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 1981, 2056, 2308, 2856, 3289 |
| BseMI | GCAATG | 2 cut(s) | 709, 3047 |
| BseNI | ACTGG | 4 cut(s) | 934, 1152, 2730, 3824 |
| BseRI | GAGGAG | 2 cut(s) | 90, 1118 |
| BseSI | GKGCMC | 1 cut(s) | 2283 |
| BseXI | GCAGC | 6 cut(s) | 263, 427, 1363, 2627, 3083, 3197 |
| BseYI | CCCAGC | 1 cut(s) | 1504 |
| BsgI | GTGCAG | 2 cut(s) | 3082, 3526 |
| BshFI | GGCC | 1 cut(s) | 1722 |
| BsiHKAI | GWGCWC | 3 cut(s) | 279, 2755, 2878 |
| BsiHKCI | CYCGRG | 2 cut(s) | 2603, 3837 |
| BsiSI | CCGG | 2 cut(s) | 944, 2543 |
| BslFI | GGGAC | 1 cut(s) | 2031 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 1981, 2056, 2308, 2856, 3289 |
| BsmBI | CGTCTC | 2 cut(s) | 144, 2216 |
| BsmFI | GGGAC | 1 cut(s) | 2031 |
| BsmI | GAATGC | 1 cut(s) | 2833 |
| BsnI | GGCC | 1 cut(s) | 1722 |
| Bso31I | GGTCTC | 3 cut(s) | 241, 2293, 3077 |
| BsoBI | CYCGRG | 2 cut(s) | 2603, 3837 |
| Bsp119I | TTCGAA | 1 cut(s) | 619 |
| Bsp1286I | GDGCHC | 4 cut(s) | 279, 2283, 2755, 2878 |
| Bsp19I | CCATGG | 3 cut(s) | 994, 2756, 3549 |
| BspACI | CCGC | 3 cut(s) | 2982, 3617, 3641 |
| BspANI | GGCC | 1 cut(s) | 1722 |
| BspHI | TCATGA | 1 cut(s) | 3363 |
| BspLI | GGNNCC | 5 cut(s) | 214, 1168, 1530, 1862, 3294 |
| BspMAI | CTGCAG | 1 cut(s) | 588 |
| BspMI | ACCTGC | 2 cut(s) | 1324, 3548 |
| BspOI | GCTAGC | 1 cut(s) | 3162 |
| BspQI | GCTCTTC | 1 cut(s) | 3754 |
| BspT104I | TTCGAA | 1 cut(s) | 619 |
| BspTNI | GGTCTC | 3 cut(s) | 241, 2293, 3077 |
| BsrDI | GCAATG | 2 cut(s) | 709, 3047 |
| BsrI | ACTGG | 4 cut(s) | 934, 1152, 2730, 3824 |
| BssECI | CCNNGG | 4 cut(s) | 994, 2505, 2756, 3549 |
| BssNI | GRCGYC | 1 cut(s) | 2323 |
| BssSI | CACGAG | 3 cut(s) | 2412, 2422, 3066 |
| BssT1I | CCWWGG | 4 cut(s) | 994, 2505, 2756, 3549 |
| Bst2BI | CACGAG | 3 cut(s) | 2412, 2422, 3066 |
| Bst2UI | CCWGG | 2 cut(s) | 3004, 3252 |
| Bst6I | CTCTTC | 4 cut(s) | 15, 1071, 2268, 3754 |
| BstACI | GRCGYC | 1 cut(s) | 2323 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 3540 |
| BstBI | TTCGAA | 1 cut(s) | 619 |
| BstC8I | GCNNGC | 6 cut(s) | 1742, 2751, 2986, 3160, 3358, 3617 |
| BstDSI | CCRYGG | 3 cut(s) | 994, 2756, 3549 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2854 |
| BstHHI | GCGC | 1 cut(s) | 3190 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 3058, 3540 |
| BstNI | CCWGG | 2 cut(s) | 3004, 3252 |
| BstNSI | RCATGY | 1 cut(s) | 3502 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1542 |
| BstSCI | CCNGG | 3 cut(s) | 943, 3002, 3250 |
| BstSFI | CTRYAG | 3 cut(s) | 164, 584, 600 |
| BstSLI | GKGCMC | 1 cut(s) | 2283 |
| BstV1I | GCAGC | 6 cut(s) | 263, 427, 1363, 2627, 3083, 3197 |
| BstV2I | GAAGAC | 5 cut(s) | 358, 1133, 1542, 2164, 2774 |
| BstX2I | RGATCY | 8 cut(s) | 160, 896, 1360, 1528, 1860, 1891, 2478, 3718 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 232, 1948 |
| BstYI | RGATCY | 8 cut(s) | 160, 896, 1360, 1528, 1860, 1891, 2478, 3718 |
| BsuI | GTATCC | 2 cut(s) | 1760, 3483 |
| BsuRI | GGCC | 1 cut(s) | 1722 |
| BtgI | CCRYGG | 3 cut(s) | 994, 2756, 3549 |
| BtrI | CACGTC | 1 cut(s) | 3546 |
| BtsI | GCAGTG | 1 cut(s) | 3409 |
| BtsIMutI | CAGTG | 7 cut(s) | 48, 397, 1145, 2103, 2291, 2745, 3409 |
| BveI | ACCTGC | 2 cut(s) | 1324, 3548 |
| Cac8I | GCNNGC | 6 cut(s) | 1742, 2751, 2986, 3160, 3358, 3617 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1870, 3540 |
| CciI | TCATGA | 1 cut(s) | 3363 |
| CfoI | GCGC | 1 cut(s) | 3190 |
| Cfr13I | GGNCC | 3 cut(s) | 941, 2502, 3293 |
| CseI | GACGC | 2 cut(s) | 3749, 3833 |
| CsiI | ACCWGGT | 1 cut(s) | 3002 |
| Csp6I | GTAC | 6 cut(s) | 314, 1206, 2175, 2600, 3385, 3644 |
| CviQI | GTAC | 6 cut(s) | 314, 1206, 2175, 2600, 3385, 3644 |
| DraI | TTTAAA | 2 cut(s) | 1776, 3024 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 2778 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 2778 |
| Eam1104I | CTCTTC | 4 cut(s) | 15, 1071, 2268, 3754 |
| EarI | CTCTTC | 4 cut(s) | 15, 1071, 2268, 3754 |
| Ecl136II | GAGCTC | 2 cut(s) | 277, 2876 |
| Eco130I | CCWWGG | 4 cut(s) | 994, 2505, 2756, 3549 |
| Eco24I | GRGCYC | 2 cut(s) | 279, 2878 |
| Eco31I | GGTCTC | 3 cut(s) | 241, 2293, 3077 |
| Eco32I | GATATC | 3 cut(s) | 597, 1243, 2512 |
| Eco47I | GGWCC | 3 cut(s) | 941, 2502, 3293 |
| Eco53kI | GAGCTC | 2 cut(s) | 277, 2876 |
| Eco57I | CTGAAG | 2 cut(s) | 1554, 3422 |
| Eco88I | CYCGRG | 2 cut(s) | 2603, 3837 |
| EcoICRI | GAGCTC | 2 cut(s) | 277, 2876 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2854 |
| EcoO109I | RGGNCCY | 2 cut(s) | 2502, 3293 |
| EcoRI | GAATTC | 2 cut(s) | 2972, 3578 |
| EcoRII | CCWGG | 2 cut(s) | 3002, 3250 |
| EcoRV | GATATC | 3 cut(s) | 597, 1243, 2512 |
| EcoT14I | CCWWGG | 4 cut(s) | 994, 2505, 2756, 3549 |
| EcoT38I | GRGCYC | 2 cut(s) | 279, 2878 |
| ErhI | CCWWGG | 4 cut(s) | 994, 2505, 2756, 3549 |
| Esp3I | CGTCTC | 2 cut(s) | 144, 2216 |
| FaqI | GGGAC | 1 cut(s) | 2031 |
| FauI | CCCGC | 2 cut(s) | 2989, 3624 |
| FauNDI | CATATG | 3 cut(s) | 573, 1541, 3766 |
| Fnu4HI | GCNGC | 6 cut(s) | 252, 441, 1377, 2641, 3097, 3186 |
| FriOI | GRGCYC | 2 cut(s) | 279, 2878 |
| Fsp4HI | GCNGC | 6 cut(s) | 252, 441, 1377, 2641, 3097, 3186 |
| GlaI | GCGC | 1 cut(s) | 3189 |
| GluI | GCNGC | 6 cut(s) | 252, 441, 1377, 2641, 3097, 3186 |
| GsaI | CCCAGC | 1 cut(s) | 1508 |
| GsuI | CTGGAG | 4 cut(s) | 199, 1031, 1970, 2802 |
| HaeIII | GGCC | 1 cut(s) | 1722 |
| HapII | CCGG | 2 cut(s) | 944, 2543 |
| HgaI | GACGC | 2 cut(s) | 3749, 3833 |
| HhaI | GCGC | 1 cut(s) | 3190 |
| Hin1I | GRCGYC | 1 cut(s) | 2323 |
| Hin6I | GCGC | 1 cut(s) | 3188 |
| HinP1I | GCGC | 1 cut(s) | 3188 |
| HincII | GTYRAC | 4 cut(s) | 1126, 1487, 1498, 2401 |
| HindII | GTYRAC | 4 cut(s) | 1126, 1487, 1498, 2401 |
| HindIII | AAGCTT | 8 cut(s) | 141, 423, 1742, 1978, 2582, 3149, 3486, 3555 |
| HpaI | GTTAAC | 2 cut(s) | 1126, 1498 |
| HpaII | CCGG | 2 cut(s) | 944, 2543 |
| HphI | GGTGA | 7 cut(s) | 383, 464, 931, 2992, 3194, 3272, 3509 |
| Hpy166II | GTNNAC | 8 cut(s) | 607, 764, 1028, 1126, 1487, 1498, 2401, 3646 |
| Hpy8I | GTNNAC | 8 cut(s) | 607, 764, 1028, 1126, 1487, 1498, 2401, 3646 |
| Hpy99I | CGWCG | 1 cut(s) | 1274 |
| HpyCH4IV | ACGT | 4 cut(s) | 57, 2323, 2345, 3545 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 3058, 3540 |
| HpySE526I | ACGT | 4 cut(s) | 57, 2323, 2345, 3545 |
| Hsp92I | GRCGYC | 1 cut(s) | 2323 |
| HspAI | GCGC | 1 cut(s) | 3188 |
| KspAI | GTTAAC | 2 cut(s) | 1126, 1498 |
| LguI | GCTCTTC | 1 cut(s) | 3754 |
| LmnI | GCTCC | 2 cut(s) | 218, 1172 |
| Lsp1109I | GCAGC | 6 cut(s) | 263, 427, 1363, 2627, 3083, 3197 |
| MabI | ACCWGGT | 1 cut(s) | 3002 |
| MaeII | ACGT | 4 cut(s) | 57, 2323, 2345, 3545 |
| MfeI | CAATTG | 2 cut(s) | 2457, 3028 |
| MflI | RGATCY | 8 cut(s) | 160, 896, 1360, 1528, 1860, 1891, 2478, 3718 |
| MhlI | GDGCHC | 4 cut(s) | 279, 2283, 2755, 2878 |
| MlyI | GAGTC | 7 cut(s) | 394, 470, 2154, 2247, 2254, 3230, 3683 |
| MmeI | TCCRAC | 1 cut(s) | 2074 |
| MroXI | GAANNNNTTC | 3 cut(s) | 565, 2466, 2807 |
| MslI | CAYNNNNRTG | 4 cut(s) | 230, 2897, 3497, 3548 |
| MspI | CCGG | 2 cut(s) | 944, 2543 |
| MspR9I | CCNGG | 3 cut(s) | 945, 3004, 3252 |
| MunI | CAATTG | 2 cut(s) | 2457, 3028 |
| Mva1269I | GAATGC | 1 cut(s) | 2833 |
| MvaI | CCWGG | 2 cut(s) | 3004, 3252 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 3058, 3540 |
| NciI | CCSGG | 1 cut(s) | 945 |
| NcoI | CCATGG | 3 cut(s) | 994, 2756, 3549 |
| NdeI | CATATG | 3 cut(s) | 573, 1541, 3766 |
| NheI | GCTAGC | 1 cut(s) | 3158 |
| NlaIV | GGNNCC | 5 cut(s) | 214, 1168, 1530, 1862, 3294 |
| NmuCI | GTSAC | 4 cut(s) | 386, 392, 961, 3257 |
| NspI | RCATGY | 1 cut(s) | 3502 |
| NspV | TTCGAA | 1 cut(s) | 619 |
| PaeR7I | CTCGAG | 2 cut(s) | 2603, 3837 |
| PagI | TCATGA | 1 cut(s) | 3363 |
| PciI | ACATGT | 1 cut(s) | 3498 |
| PciSI | GCTCTTC | 1 cut(s) | 3754 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 1744, 1753, 2776 |
| PctI | GAATGC | 1 cut(s) | 2833 |
| PdmI | GAANNNNTTC | 3 cut(s) | 565, 2466, 2807 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1981, 3289 |
| PfoI | TCCNGGA | 2 cut(s) | 943, 3250 |
| PkrI | GCNGC | 6 cut(s) | 253, 442, 1378, 2642, 3098, 3187 |
| PleI | GAGTC | 7 cut(s) | 393, 470, 2154, 2247, 2254, 3229, 3683 |
| PpsI | GAGTC | 7 cut(s) | 393, 470, 2154, 2247, 2254, 3229, 3683 |
| PpuMI | RGGWCCY | 2 cut(s) | 2502, 3293 |
| PscI | ACATGT | 1 cut(s) | 3498 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1542 |
| PsiI | TTATAA | 1 cut(s) | 1323 |
| Psp124BI | GAGCTC | 2 cut(s) | 279, 2878 |
| Psp5II | RGGWCCY | 2 cut(s) | 2502, 3293 |
| Psp6I | CCWGG | 2 cut(s) | 3002, 3250 |
| PspFI | CCCAGC | 1 cut(s) | 1504 |
| PspGI | CCWGG | 2 cut(s) | 3002, 3250 |
| PspN4I | GGNNCC | 5 cut(s) | 214, 1168, 1530, 1862, 3294 |
| PspPI | GGNCC | 3 cut(s) | 941, 2502, 3293 |
| PspPPI | RGGWCCY | 2 cut(s) | 2502, 3293 |
| PstI | CTGCAG | 1 cut(s) | 588 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1870, 3540 |
| PsuI | RGATCY | 8 cut(s) | 160, 896, 1360, 1528, 1860, 1891, 2478, 3718 |
| RsaI | GTAC | 6 cut(s) | 315, 1207, 2176, 2601, 3386, 3645 |
| RsaNI | GTAC | 6 cut(s) | 314, 1206, 2175, 2600, 3385, 3644 |
| RseI | CAYNNNNRTG | 4 cut(s) | 230, 2897, 3497, 3548 |
| SacI | GAGCTC | 2 cut(s) | 279, 2878 |
| SapI | GCTCTTC | 1 cut(s) | 3754 |
| SatI | GCNGC | 6 cut(s) | 252, 441, 1377, 2641, 3097, 3186 |
| Sau96I | GGNCC | 3 cut(s) | 941, 2502, 3293 |
| ScaI | AGTACT | 1 cut(s) | 1207 |
| SchI | GAGTC | 7 cut(s) | 394, 470, 2154, 2247, 2254, 3230, 3683 |
| ScrFI | CCNGG | 3 cut(s) | 945, 3004, 3252 |
| SduI | GDGCHC | 4 cut(s) | 279, 2283, 2755, 2878 |
| SexAI | ACCWGGT | 1 cut(s) | 3002 |
| SfcI | CTRYAG | 3 cut(s) | 164, 584, 600 |
| Sfr274I | CTCGAG | 2 cut(s) | 2603, 3837 |
| SfuI | TTCGAA | 1 cut(s) | 619 |
| SinI | GGWCC | 3 cut(s) | 941, 2502, 3293 |
| SlaI | CTCGAG | 2 cut(s) | 2603, 3837 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 230, 2897, 3497, 3548 |
| SmlI | CTYRAG | 9 cut(s) | 2054, 2116, 2327, 2579, 2603, 2644, 2714, 2869, 3837 |
| SmoI | CTYRAG | 9 cut(s) | 2054, 2116, 2327, 2579, 2603, 2644, 2714, 2869, 3837 |
| SpeI | ACTAGT | 1 cut(s) | 3106 |
| SsiI | CCGC | 3 cut(s) | 2982, 3617, 3641 |
| SspI | AATATT | 1 cut(s) | 3137 |
| SstI | GAGCTC | 2 cut(s) | 279, 2878 |
| StyD4I | CCNGG | 3 cut(s) | 943, 3002, 3250 |
| StyI | CCWWGG | 4 cut(s) | 994, 2505, 2756, 3549 |
| TaiI | ACGT | 4 cut(s) | 60, 2326, 2348, 3548 |
| TaqI | TCGA | 8 cut(s) | 619, 1180, 1633, 1641, 1917, 2604, 3588, 3838 |
| TatI | WGTACW | 3 cut(s) | 1205, 2174, 2599 |
| TscAI | CASTG | 7 cut(s) | 48, 397, 1152, 2103, 2298, 2745, 3416 |
| TseFI | GTSAC | 4 cut(s) | 386, 392, 961, 3257 |
| TseI | GCWGC | 6 cut(s) | 251, 440, 1376, 2640, 3096, 3185 |
| Tsp45I | GTSAC | 4 cut(s) | 386, 392, 961, 3257 |
| TspGWI | ACGGA | 3 cut(s) | 68, 1287, 1745 |
| TspRI | CASTG | 7 cut(s) | 48, 397, 1152, 2103, 2298, 2745, 3416 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1981, 3289 |
| VpaK11BI | GGWCC | 3 cut(s) | 941, 2502, 3293 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2854 |
| XceI | RCATGY | 1 cut(s) | 3502 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2142 |
| XhoI | CTCGAG | 2 cut(s) | 2603, 3837 |
| XmnI | GAANNNNTTC | 3 cut(s) | 565, 2466, 2807 |
| ZraI | GACGTC | 1 cut(s) | 2324 |
| ZrmI | AGTACT | 1 cut(s) | 1207 |