eukaryotic translation initiation factor
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 2169 |
| AatII | GACGTC | 1 cut(s) | 78 |
| Acc36I | ACCTGC | 1 cut(s) | 2645 |
| AccB1I | GGYRCC | 3 cut(s) | 1707, 2208, 2726 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1981 |
| AccI | GTMKAC | 2 cut(s) | 1681, 2512 |
| AccIII | TCCGGA | 1 cut(s) | 1910 |
| AciI | CCGC | 4 cut(s) | 19, 1711, 2543, 3322 |
| AclWI | GGATC | 9 cut(s) | 1566, 2193, 2678, 2691, 2746, 3371, 3384, 3517, 3530 |
| AcoI | YGGCCR | 1 cut(s) | 1669 |
| AcsI | RAATTY | 6 cut(s) | 1643, 1953, 2285, 2560, 2706, 3195 |
| AcuI | CTGAAG | 4 cut(s) | 1703, 1907, 2625, 3402 |
| AcyI | GRCGYC | 1 cut(s) | 75 |
| AdeI | CACNNNGTG | 1 cut(s) | 3253 |
| AfaI | GTAC | 8 cut(s) | 295, 396, 1858, 1967, 2428, 3072, 3185, 3424 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 1981, 2086, 2654, 3046 |
| AflIII | ACRYGT | 3 cut(s) | 82, 2785, 3073 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1786 |
| AjnI | CCWGG | 7 cut(s) | 40, 316, 1942, 2011, 2554, 3442, 3557 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1404, 1436, 2809, 2841 |
| Alw21I | GWGCWC | 2 cut(s) | 147, 2111 |
| Alw26I | GTCTC | 1 cut(s) | 3201 |
| AlwI | GGATC | 9 cut(s) | 1566, 2193, 2678, 2691, 2746, 3371, 3384, 3517, 3530 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1767 |
| Ama87I | CYCGRG | 1 cut(s) | 2489 |
| Aor13HI | TCCGGA | 1 cut(s) | 1910 |
| AoxI | GGCC | 9 cut(s) | 613, 682, 895, 1108, 1510, 1669, 2383, 2635, 3162 |
| ApaI | GGGCCC | 1 cut(s) | 2639 |
| ApeKI | GCWGC | 6 cut(s) | 1761, 2414, 2598, 2937, 3218, 3400 |
| ApoI | RAATTY | 6 cut(s) | 1643, 1953, 2285, 2560, 2706, 3195 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1480, 1512 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 246, 552, 1692, 2991 |
| AspLEI | GCGC | 1 cut(s) | 51 |
| AspS9I | GGNCC | 4 cut(s) | 2311, 2635, 2636, 3162 |
| AsuC2I | CCSGG | 1 cut(s) | 23 |
| AsuHPI | GGTGA | 3 cut(s) | 175, 1434, 1964 |
| AvaI | CYCGRG | 1 cut(s) | 2489 |
| AvaII | GGWCC | 1 cut(s) | 2311 |
| BaeGI | GKGCMC | 2 cut(s) | 2211, 2639 |
| BamHI | GGATCC | 3 cut(s) | 2683, 3376, 3522 |
| BanI | GGYRCC | 3 cut(s) | 1707, 2208, 2726 |
| BanII | GRGCYC | 2 cut(s) | 147, 2639 |
| BauI | CACGAG | 2 cut(s) | 374, 587 |
| BbsI | GAAGAC | 4 cut(s) | 587, 800, 1013, 1226 |
| Bbv12I | GWGCWC | 2 cut(s) | 147, 2111 |
| BbvCI | CCTCAGC | 1 cut(s) | 2862 |
| BbvI | GCAGC | 6 cut(s) | 1773, 2426, 2585, 2949, 3230, 3387 |
| BccI | CCATC | 8 cut(s) | 1387, 1804, 2029, 2235, 2524, 2729, 2949, 3252 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 355, 389, 1497, 1531 |
| BciT130I | CCWGG | 7 cut(s) | 42, 318, 1944, 2013, 2556, 3444, 3559 |
| BclI | TGATCA | 1 cut(s) | 2746 |
| BcnI | CCSGG | 1 cut(s) | 23 |
| BcoDI | GTCTC | 1 cut(s) | 3201 |
| BfaI | CTAG | 3 cut(s) | 284, 2150, 2421 |
| BfmI | CTRYAG | 5 cut(s) | 1678, 1998, 2935, 3096, 3189 |
| BfuAI | ACCTGC | 1 cut(s) | 2645 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 46 |
| BglII | AGATCT | 6 cut(s) | 583, 631, 844, 1057, 1270, 3054 |
| BisI | GCNGC | 8 cut(s) | 1711, 1762, 2415, 2599, 2938, 3219, 3323, 3401 |
| BlsI | GCNGC | 8 cut(s) | 1712, 1763, 2416, 2600, 2939, 3220, 3324, 3402 |
| BmcAI | AGTACT | 1 cut(s) | 2428 |
| Bme1390I | CCNGG | 8 cut(s) | 23, 42, 318, 1944, 2013, 2556, 3444, 3559 |
| Bme18I | GGWCC | 1 cut(s) | 2311 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1786 |
| BmeT110I | CYCGRG | 1 cut(s) | 2489 |
| BmgT120I | GGNCC | 4 cut(s) | 2311, 2635, 2636, 3162 |
| BmrFI | CCNGG | 8 cut(s) | 23, 42, 318, 1944, 2013, 2556, 3444, 3559 |
| BmrI | ACTGGG | 2 cut(s) | 1518, 1584 |
| BmuI | ACTGGG | 2 cut(s) | 1518, 1584 |
| BoxI | GACNNNNGTC | 1 cut(s) | 468 |
| BpiI | GAAGAC | 4 cut(s) | 587, 800, 1013, 1226 |
| BpmI | CTGGAG | 3 cut(s) | 339, 1965, 3479 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2862 |
| BpuEI | CTTGAG | 5 cut(s) | 54, 290, 802, 1015, 1228 |
| BpuMI | CCSGG | 1 cut(s) | 23 |
| BsaAI | YACGTR | 1 cut(s) | 398 |
| BsaBI | GATNNNNATC | 5 cut(s) | 636, 849, 1062, 1275, 2250 |
| BsaHI | GRCGYC | 1 cut(s) | 75 |
| BsaJI | CCNNGG | 1 cut(s) | 316 |
| BsaWI | WCCGGW | 3 cut(s) | 457, 1910, 3231 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 141, 171, 312, 342 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 1981, 2086, 2654, 3046 |
| Bse3DI | GCAATG | 3 cut(s) | 1724, 1868, 2571 |
| Bse8I | GATNNNNATC | 5 cut(s) | 636, 849, 1062, 1275, 2250 |
| BseAI | TCCGGA | 1 cut(s) | 1910 |
| BseBI | CCWGG | 7 cut(s) | 42, 318, 1944, 2013, 2556, 3444, 3559 |
| BseDI | CCNNGG | 1 cut(s) | 316 |
| BseJI | GATNNNNATC | 5 cut(s) | 636, 849, 1062, 1275, 2250 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 1981, 2086, 2654, 3046 |
| BseMI | GCAATG | 3 cut(s) | 1724, 1868, 2571 |
| BseMII | CTCAG | 6 cut(s) | 132, 341, 1650, 2802, 2853, 3042 |
| BseRI | GAGGAG | 5 cut(s) | 503, 689, 902, 1115, 2354 |
| BseSI | GKGCMC | 2 cut(s) | 2211, 2639 |
| BseXI | GCAGC | 6 cut(s) | 1773, 2426, 2585, 2949, 3230, 3387 |
| BseYI | CCCAGC | 2 cut(s) | 2528, 2618 |
| BsgI | GTGCAG | 2 cut(s) | 2584, 2825 |
| Bsh1285I | CGRYCG | 1 cut(s) | 3029 |
| BshFI | GGCC | 9 cut(s) | 615, 684, 897, 1110, 1512, 1671, 2385, 2637, 3164 |
| BshNI | GGYRCC | 3 cut(s) | 1707, 2208, 2726 |
| BsiEI | CGRYCG | 1 cut(s) | 3029 |
| BsiHKAI | GWGCWC | 2 cut(s) | 147, 2111 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2489 |
| BsiSI | CCGG | 5 cut(s) | 22, 458, 1505, 1911, 3232 |
| BslFI | GGGAC | 4 cut(s) | 733, 946, 1159, 2175 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 1981, 2086, 2654, 3046 |
| BsmAI | GTCTC | 1 cut(s) | 3201 |
| BsmFI | GGGAC | 4 cut(s) | 733, 946, 1159, 2175 |
| BsmI | GAATGC | 4 cut(s) | 172, 546, 1540, 2045 |
| BsnI | GGCC | 9 cut(s) | 615, 684, 897, 1110, 1512, 1671, 2385, 2637, 3164 |
| BsoBI | CYCGRG | 1 cut(s) | 2489 |
| Bsp120I | GGGCCC | 1 cut(s) | 2635 |
| Bsp1286I | GDGCHC | 4 cut(s) | 147, 2111, 2211, 2639 |
| Bsp13I | TCCGGA | 1 cut(s) | 1910 |
| Bsp1407I | TGTACA | 2 cut(s) | 293, 3070 |
| BspACI | CCGC | 4 cut(s) | 19, 1711, 2543, 3322 |
| BspANI | GGCC | 9 cut(s) | 615, 684, 897, 1110, 1512, 1671, 2385, 2637, 3164 |
| BspCNI | CTCAG | 6 cut(s) | 133, 342, 1651, 2803, 2854, 3043 |
| BspEI | TCCGGA | 1 cut(s) | 1910 |
| BspHI | TCATGA | 1 cut(s) | 34 |
| BspMAI | CTGCAG | 1 cut(s) | 2939 |
| BspMI | ACCTGC | 1 cut(s) | 2645 |
| BspPI | GGATC | 9 cut(s) | 1566, 2193, 2678, 2691, 2746, 3371, 3384, 3517, 3530 |
| BspT107I | GGYRCC | 3 cut(s) | 1707, 2208, 2726 |
| BsrDI | GCAATG | 3 cut(s) | 1724, 1868, 2571 |
| BsrGI | TGTACA | 2 cut(s) | 293, 3070 |
| BssECI | CCNNGG | 1 cut(s) | 316 |
| BssNI | GRCGYC | 1 cut(s) | 75 |
| BssSI | CACGAG | 2 cut(s) | 374, 587 |
| Bst2BI | CACGAG | 2 cut(s) | 374, 587 |
| Bst2UI | CCWGG | 7 cut(s) | 42, 318, 1944, 2013, 2556, 3444, 3559 |
| Bst4CI | ACNGT | 7 cut(s) | 1440, 1999, 2166, 2213, 3125, 3301, 3430 |
| Bst6I | CTCTTC | 4 cut(s) | 696, 909, 1122, 2445 |
| BstACI | GRCGYC | 1 cut(s) | 75 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1767, 2438 |
| BstAUI | TGTACA | 2 cut(s) | 293, 3070 |
| BstBAI | YACGTR | 1 cut(s) | 398 |
| BstC8I | GCNNGC | 9 cut(s) | 47, 388, 755, 968, 1181, 1510, 1715, 3116, 3240 |
| BstDEI | CTNAG | 9 cut(s) | 141, 350, 1562, 1659, 2662, 2811, 2862, 3051, 3211 |
| BstEII | GGTNACC | 1 cut(s) | 1440 |
| BstHHI | GCGC | 1 cut(s) | 51 |
| BstMAI | GTCTC | 1 cut(s) | 3201 |
| BstMCI | CGRYCG | 1 cut(s) | 3029 |
| BstNI | CCWGG | 7 cut(s) | 42, 318, 1944, 2013, 2556, 3444, 3559 |
| BstNSI | RCATGY | 6 cut(s) | 86, 757, 970, 1183, 2789, 3077 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 468 |
| BstPI | GGTNACC | 1 cut(s) | 1440 |
| BstSCI | CCNGG | 8 cut(s) | 21, 40, 316, 1942, 2011, 2554, 3442, 3557 |
| BstSFI | CTRYAG | 5 cut(s) | 1678, 1998, 2935, 3096, 3189 |
| BstSLI | GKGCMC | 2 cut(s) | 2211, 2639 |
| BstV1I | GCAGC | 6 cut(s) | 1773, 2426, 2585, 2949, 3230, 3387 |
| BstV2I | GAAGAC | 4 cut(s) | 587, 800, 1013, 1226 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 2234, 2578 |
| BsuRI | GGCC | 9 cut(s) | 615, 684, 897, 1110, 1512, 1671, 2385, 2637, 3164 |
| BtsI | GCAGTG | 4 cut(s) | 397, 823, 1036, 1249 |
| BveI | ACCTGC | 1 cut(s) | 2645 |
| Cac8I | GCNNGC | 9 cut(s) | 47, 388, 755, 968, 1181, 1510, 1715, 3116, 3240 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1767 |
| CciI | TCATGA | 1 cut(s) | 34 |
| CfoI | GCGC | 1 cut(s) | 51 |
| Cfr13I | GGNCC | 4 cut(s) | 2311, 2635, 2636, 3162 |
| CseI | GACGC | 1 cut(s) | 2507 |
| CsiI | ACCWGGT | 1 cut(s) | 3442 |
| Csp6I | GTAC | 8 cut(s) | 294, 395, 1857, 1966, 2427, 3071, 3184, 3423 |
| CviQI | GTAC | 8 cut(s) | 294, 395, 1857, 1966, 2427, 3071, 3184, 3423 |
| DdeI | CTNAG | 9 cut(s) | 141, 350, 1562, 1659, 2662, 2811, 2862, 3051, 3211 |
| DraI | TTTAAA | 3 cut(s) | 1398, 2482, 3154 |
| DraIII | CACNNNGTG | 1 cut(s) | 3253 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 2169 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1786 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 2169 |
| EaeI | YGGCCR | 1 cut(s) | 1669 |
| Eam1104I | CTCTTC | 4 cut(s) | 696, 909, 1122, 2445 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1786 |
| EarI | CTCTTC | 4 cut(s) | 696, 909, 1122, 2445 |
| EciI | GGCGGA | 1 cut(s) | 8 |
| Ecl136II | GAGCTC | 1 cut(s) | 145 |
| Eco147I | AGGCCT | 1 cut(s) | 1512 |
| Eco24I | GRGCYC | 2 cut(s) | 147, 2639 |
| Eco32I | GATATC | 1 cut(s) | 2248 |
| Eco47I | GGWCC | 1 cut(s) | 2311 |
| Eco53kI | GAGCTC | 1 cut(s) | 145 |
| Eco57I | CTGAAG | 4 cut(s) | 1703, 1907, 2625, 3402 |
| Eco88I | CYCGRG | 1 cut(s) | 2489 |
| Eco91I | GGTNACC | 1 cut(s) | 1440 |
| EcoICRI | GAGCTC | 1 cut(s) | 145 |
| EcoO109I | RGGNCCY | 2 cut(s) | 2635, 2636 |
| EcoO65I | GGTNACC | 1 cut(s) | 1440 |
| EcoRII | CCWGG | 7 cut(s) | 40, 316, 1942, 2011, 2554, 3442, 3557 |
| EcoRV | GATATC | 1 cut(s) | 2248 |
| EcoT38I | GRGCYC | 2 cut(s) | 147, 2639 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2809, 2841 |
| FaqI | GGGAC | 4 cut(s) | 733, 946, 1159, 2175 |
| FauNDI | CATATG | 1 cut(s) | 2503 |
| FbaI | TGATCA | 1 cut(s) | 2746 |
| FblI | GTMKAC | 2 cut(s) | 1681, 2512 |
| Fnu4HI | GCNGC | 8 cut(s) | 1711, 1762, 2415, 2599, 2938, 3219, 3323, 3401 |
| FriOI | GRGCYC | 2 cut(s) | 147, 2639 |
| Fsp4HI | GCNGC | 8 cut(s) | 1711, 1762, 2415, 2599, 2938, 3219, 3323, 3401 |
| FspBI | CTAG | 3 cut(s) | 284, 2150, 2421 |
| GlaI | GCGC | 1 cut(s) | 50 |
| GluI | GCNGC | 8 cut(s) | 1711, 1762, 2415, 2599, 2938, 3219, 3323, 3401 |
| GsaI | CCCAGC | 2 cut(s) | 2532, 2622 |
| GsuI | CTGGAG | 3 cut(s) | 339, 1965, 3479 |
| HaeIII | GGCC | 9 cut(s) | 615, 684, 897, 1110, 1512, 1671, 2385, 2637, 3164 |
| HapII | CCGG | 5 cut(s) | 22, 458, 1505, 1911, 3232 |
| HgaI | GACGC | 1 cut(s) | 2507 |
| HhaI | GCGC | 1 cut(s) | 51 |
| Hin1I | GRCGYC | 1 cut(s) | 75 |
| Hin6I | GCGC | 1 cut(s) | 49 |
| HinP1I | GCGC | 1 cut(s) | 49 |
| HincII | GTYRAC | 4 cut(s) | 313, 1617, 2174, 2932 |
| HindII | GTYRAC | 4 cut(s) | 313, 1617, 2174, 2932 |
| HindIII | AAGCTT | 8 cut(s) | 443, 656, 869, 1082, 1295, 1343, 1715, 3384 |
| HpaI | GTTAAC | 2 cut(s) | 1617, 2932 |
| HpaII | CCGG | 5 cut(s) | 22, 458, 1505, 1911, 3232 |
| HphI | GGTGA | 3 cut(s) | 175, 1434, 1964 |
| HpyCH4III | ACNGT | 7 cut(s) | 1440, 1999, 2166, 2213, 3125, 3301, 3430 |
| HpyCH4IV | ACGT | 4 cut(s) | 75, 397, 3182, 3249 |
| HpyF3I | CTNAG | 9 cut(s) | 141, 350, 1562, 1659, 2662, 2811, 2862, 3051, 3211 |
| HpySE526I | ACGT | 4 cut(s) | 75, 397, 3182, 3249 |
| Hsp92I | GRCGYC | 1 cut(s) | 75 |
| HspAI | GCGC | 1 cut(s) | 49 |
| Kpn2I | TCCGGA | 1 cut(s) | 1910 |
| Ksp22I | TGATCA | 1 cut(s) | 2746 |
| KspAI | GTTAAC | 2 cut(s) | 1617, 2932 |
| LmnI | GCTCC | 5 cut(s) | 490, 1945, 2341, 2572, 3215 |
| Lsp1109I | GCAGC | 6 cut(s) | 1773, 2426, 2585, 2949, 3230, 3387 |
| MabI | ACCWGGT | 1 cut(s) | 3442 |
| MaeI | CTAG | 3 cut(s) | 284, 2150, 2421 |
| MaeII | ACGT | 4 cut(s) | 75, 397, 3182, 3249 |
| MaeIII | GTNAC | 4 cut(s) | 1440, 1496, 1565, 3253 |
| MhlI | GDGCHC | 4 cut(s) | 147, 2111, 2211, 2639 |
| MlyI | GAGTC | 6 cut(s) | 128, 2073, 2216, 2481, 2921, 3263 |
| MmeI | TCCRAC | 2 cut(s) | 1763, 2163 |
| MroI | TCCGGA | 1 cut(s) | 1910 |
| MroXI | GAANNNNTTC | 4 cut(s) | 246, 552, 1692, 2991 |
| MslI | CAYNNNNRTG | 5 cut(s) | 501, 2279, 2397, 2576, 2790 |
| MspI | CCGG | 5 cut(s) | 22, 458, 1505, 1911, 3232 |
| MspR9I | CCNGG | 8 cut(s) | 23, 42, 318, 1944, 2013, 2556, 3444, 3559 |
| Mva1269I | GAATGC | 4 cut(s) | 172, 546, 1540, 2045 |
| MvaI | CCWGG | 7 cut(s) | 42, 318, 1944, 2013, 2556, 3444, 3559 |
| NciI | CCSGG | 1 cut(s) | 23 |
| NdeI | CATATG | 1 cut(s) | 2503 |
| NmeAIII | GCCGAG | 1 cut(s) | 2391 |
| NmuCI | GTSAC | 4 cut(s) | 1440, 1496, 1565, 3253 |
| NspI | RCATGY | 6 cut(s) | 86, 757, 970, 1183, 2789, 3077 |
| PaeI | GCATGC | 3 cut(s) | 757, 970, 1183 |
| PaeR7I | CTCGAG | 1 cut(s) | 2489 |
| PagI | TCATGA | 1 cut(s) | 34 |
| PceI | AGGCCT | 1 cut(s) | 1512 |
| PciI | ACATGT | 3 cut(s) | 82, 2785, 3073 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 2834 |
| PctI | GAATGC | 4 cut(s) | 172, 546, 1540, 2045 |
| PdmI | GAANNNNTTC | 4 cut(s) | 246, 552, 1692, 2991 |
| PfeI | GAWTC | 7 cut(s) | 26, 346, 370, 2040, 2624, 2714, 3490 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1981 |
| PfoI | TCCNGGA | 2 cut(s) | 1942, 2554 |
| PkrI | GCNGC | 8 cut(s) | 1712, 1763, 2416, 2600, 2939, 3220, 3324, 3402 |
| PleI | GAGTC | 6 cut(s) | 128, 2072, 2216, 2481, 2920, 3263 |
| PpsI | GAGTC | 6 cut(s) | 128, 2072, 2216, 2481, 2920, 3263 |
| Ppu21I | YACGTR | 1 cut(s) | 398 |
| PscI | ACATGT | 3 cut(s) | 82, 2785, 3073 |
| PshAI | GACNNNNGTC | 1 cut(s) | 468 |
| Psp124BI | GAGCTC | 1 cut(s) | 147 |
| Psp6I | CCWGG | 7 cut(s) | 40, 316, 1942, 2011, 2554, 3442, 3557 |
| PspEI | GGTNACC | 1 cut(s) | 1440 |
| PspFI | CCCAGC | 2 cut(s) | 2528, 2618 |
| PspGI | CCWGG | 7 cut(s) | 40, 316, 1942, 2011, 2554, 3442, 3557 |
| PspOMI | GGGCCC | 1 cut(s) | 2635 |
| PspPI | GGNCC | 4 cut(s) | 2311, 2635, 2636, 3162 |
| PspXI | VCTCGAGB | 1 cut(s) | 2489 |
| PstI | CTGCAG | 1 cut(s) | 2939 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1767 |
| RsaI | GTAC | 8 cut(s) | 295, 396, 1858, 1967, 2428, 3072, 3185, 3424 |
| RsaNI | GTAC | 8 cut(s) | 294, 395, 1857, 1966, 2427, 3071, 3184, 3423 |
| RseI | CAYNNNNRTG | 5 cut(s) | 501, 2279, 2397, 2576, 2790 |
| SacI | GAGCTC | 1 cut(s) | 147 |
| SatI | GCNGC | 8 cut(s) | 1711, 1762, 2415, 2599, 2938, 3219, 3323, 3401 |
| Sau96I | GGNCC | 4 cut(s) | 2311, 2635, 2636, 3162 |
| ScaI | AGTACT | 1 cut(s) | 2428 |
| SchI | GAGTC | 6 cut(s) | 128, 2073, 2216, 2481, 2921, 3263 |
| ScrFI | CCNGG | 8 cut(s) | 23, 42, 318, 1944, 2013, 2556, 3444, 3559 |
| SduI | GDGCHC | 4 cut(s) | 147, 2111, 2211, 2639 |
| SexAI | ACCWGGT | 1 cut(s) | 3442 |
| SfcI | CTRYAG | 5 cut(s) | 1678, 1998, 2935, 3096, 3189 |
| Sfr274I | CTCGAG | 1 cut(s) | 2489 |
| SinI | GGWCC | 1 cut(s) | 2311 |
| SlaI | CTCGAG | 1 cut(s) | 2489 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 501, 2279, 2397, 2576, 2790 |
| SmlI | CTYRAG | 6 cut(s) | 69, 269, 781, 994, 1207, 2489 |
| SmoI | CTYRAG | 6 cut(s) | 69, 269, 781, 994, 1207, 2489 |
| SphI | GCATGC | 3 cut(s) | 757, 970, 1183 |
| SseBI | AGGCCT | 1 cut(s) | 1512 |
| SsiI | CCGC | 4 cut(s) | 19, 1711, 2543, 3322 |
| SspI | AATATT | 1 cut(s) | 2881 |
| SspMI | CTAG | 3 cut(s) | 284, 2150, 2421 |
| SstI | GAGCTC | 1 cut(s) | 147 |
| StuI | AGGCCT | 1 cut(s) | 1512 |
| StyD4I | CCNGG | 8 cut(s) | 21, 40, 316, 1942, 2011, 2554, 3442, 3557 |
| TaaI | ACNGT | 7 cut(s) | 1440, 1999, 2166, 2213, 3125, 3301, 3430 |
| TaiI | ACGT | 4 cut(s) | 78, 400, 3185, 3252 |
| TaqI | TCGA | 2 cut(s) | 182, 2490 |
| TaqII | GACCGA | 2 cut(s) | 3015, 3019 |
| TatI | WGTACW | 5 cut(s) | 293, 1856, 2426, 3070, 3422 |
| TauI | GCSGC | 2 cut(s) | 1713, 3325 |
| TfiI | GAWTC | 7 cut(s) | 26, 346, 370, 2040, 2624, 2714, 3490 |
| TseFI | GTSAC | 4 cut(s) | 1440, 1496, 1565, 3253 |
| TseI | GCWGC | 6 cut(s) | 1761, 2414, 2598, 2937, 3218, 3400 |
| Tsp45I | GTSAC | 4 cut(s) | 1440, 1496, 1565, 3253 |
| TspGWI | ACGGA | 2 cut(s) | 2139, 2303 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1981 |
| VpaK11BI | GGWCC | 1 cut(s) | 2311 |
| XapI | RAATTY | 6 cut(s) | 1643, 1953, 2285, 2560, 2706, 3195 |
| XbaI | TCTAGA | 1 cut(s) | 283 |
| XceI | RCATGY | 6 cut(s) | 86, 757, 970, 1183, 2789, 3077 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1746 |
| XhoI | CTCGAG | 1 cut(s) | 2489 |
| XmiI | GTMKAC | 2 cut(s) | 1681, 2512 |
| XmnI | GAANNNNTTC | 4 cut(s) | 246, 552, 1692, 2991 |
| XspI | CTAG | 3 cut(s) | 284, 2150, 2421 |
| ZraI | GACGTC | 1 cut(s) | 76 |
| ZrmI | AGTACT | 1 cut(s) | 2428 |